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2024-05-18 11:45:33

Gene list

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COG category: NOT ANALYZED
Organism: Yersinia pestis KIM, KIM

Number of genes found: 337

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Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA chromosome repeat_region3538149 512 + 0.474609
NA chromosome repeat_region506972 1954 + 0.51433
NA chromosome repeat_region2838109 1954 - 0.51433
NA pMT-1 repeat_region9576 717 + 0.460251
NA pMT-1 repeat_region2287 19 - 0.421053
NA yr013 5S ribosomal RNAchromosome rRNA570277 120 + 0.625
NA chromosome repeat_region4007573 126 - 0.444444
NA y1088 chromosome pseudo1226982 1656 + 0.469807
NA yt069 tRNA-Metchromosome tRNA3923482 74 + 0.554054
NA chromosome repeat_region1708893 1315 - 0.488973
NA yt048 tRNA-Asnchromosome tRNA2645436 73 + 0.520548
NA chromosome repeat_region1950413 710 + 0.461972
NA y2092 chromosome pseudo2302849 1370 + 0.483942
NA yt072 tRNA-Prochromosome tRNA4251363 74 + 0.621622
NA y3734 chromosome pseudo4148867 3623 + 0.516975
NA y2547 chromosome pseudo2808453 1451 - 0.49552
NA y1927 chromosome pseudo2119601 1476 + 0.489837
NA yt061 tRNA-Lyschromosome tRNA3361706 73 - 0.506849
NA yr015 23S ribosomal RNAchromosome rRNA1026455 2907 + 0.527004
NA yt012 tRNA-Thrchromosome tRNA534149 73 + 0.547945
NA chromosome repeat_region3028267 710 - 0.464789
NA chromosome repeat_region305463 201 - 0.437811
NA yr020 16S ribosomal RNAchromosome rRNA3415745 1585 - 0.539432
NA chromosome repeat_region2558300 1315 - 0.488213
NA chromosome repeat_region3263698 710 - 0.46338
NA chromosome repeat_region1844038 1954 - 0.51433
NA chromosome repeat_region3053970 710 - 0.46338
NA Y1115 pMT-1 variation99325 3 + 1
NA y0822 chromosome pseudo922738 1421 + 0.557354
NA chromosome repeat_region2180043 710 + 0.461972
NA pMT-1 repeat_region341 23 - 0.608696
NA y3416 chromosome pseudo3784265 5802 + 0.492761
NA chromosome repeat_region1943015 710 + 0.46338
NA yt037 tRNA-Alachromosome tRNA1658740 73 - 0.60274
NA yt046 tRNA-Serchromosome tRNA2512097 87 + 0.586207
NA chromosome repeat_region2140011 200 - 0.49
NA y3901 chromosome pseudo4357146 2405 + 0.494387
NA chromosome repeat_region2044214 1954 - 0.514841
NA yr021 6S RNAchromosome rRNA3632001 183 + 0.562842
NA pMT-1 repeat_region665 19 - 0.578947
NA yt047 tRNA-Serchromosome tRNA2520506 87 + 0.574713
NA y3046 chromosome pseudo3353693 1070 + 0.514953
NA yt060 tRNA-Lyschromosome tRNA3361603 73 - 0.506849
NA chromosome repeat_region3643507 709 - 0.464034
NA pMT-1 repeat_region50872 1385 + 0.480866
NA pMT-1 repeat_region282 19 + 0.368421
NA yt070 tRNA-Leuchromosome tRNA4173142 84 + 0.559524
NA Y1092 pMT-1 misc_feature72557 74 + 0.608108
NA yt011 tRNA-Alachromosome tRNA524165 73 + 0.643836
NA y1077 chromosome pseudo1212447 1222 + 0.271686
NA chromosome repeat_region1016940 710 + 0.464789
NA chromosome repeat_region1051352 1954 - 0.51433
NA yt021 tRNA-Metchromosome tRNA769664 74 + 0.662162
NA pMT-1 repeat_region202 19 + 0.368421
NA y2278 chromosome pseudo2514598 1793 + 0.511991
NA yt041 tRNA-Lyschromosome tRNA1661951 73 + 0.506849
NA yr011 16S ribosomal RNAchromosome rRNA565257 1585 + 0.539432
NA Y1099 pMT-1 variation81267 1 +
NA chromosome repeat_region56575 517 + 0.470019
NA chromosome repeat_region1458591 710 + 0.46338
NA Y1099 pMT-1 variation80326 1 + 1
NA y0271 chromosome pseudo287382 3461 - 0.545507
NA yt045 tRNA-Tyrchromosome tRNA2379356 82 + 0.585366
NA chromosome repeat_region2776422 710 - 0.46338
NA chromosome repeat_region2189190 710 - 0.464789
NA yt004 tRNA-Aspchromosome tRNA361193 80 + 0.65
NA y1207 chromosome pseudo1356757 2677 + 0.50056
NA pMT-1 repeat_region487 19 + 0.421053
NA chromosome repeat_region2920486 710 - 0.464789
NA yt005 tRNA-Trpchromosome tRNA361278 73 + 0.589041
NA pMT-1 repeat_region593 19 - 0.526316
NA y4104 chromosome pseudo4554621 616 - 0.525974
NA chromosome repeat_region1133388 1954 + 0.51433
NA yt056 tRNA-Prochromosome tRNA3231057 74 + 0.594595
NA yt031 tRNA-Metchromosome tRNA1342244 74 - 0.554054
NA chromosome repeat_region4247128 1954 + 0.51433
NA chromosome repeat_region1445151 710 + 0.464789
NA yt019 tRNA-Glychromosome tRNA704794 73 + 0.60274
NA Y1070 pMT-1 variation57631 1 +
NA y3736 chromosome pseudo4153922 1273 - 0.48861
NA chromosome repeat_region839604 1954 - 0.51433
NA chromosome repeat_region963793 710 - 0.464789
NA chromosome repeat_region3111196 710 - 0.46338
NA chromosome repeat_region2087418 1315 + 0.488213
NA y2632 chromosome pseudo2896505 1814 + 0.42613
NA chromosome repeat_region2453292 1954 - 0.51433
NA yr008 16S ribosomal RNAchromosome rRNA522393 1585 + 0.539432
NA pMT-1 repeat_region2307 19 - 0.526316
NA yt043 tRNA-Valchromosome tRNA2145274 74 - 0.554054
NA chromosome repeat_region1924991 1315 + 0.488213
NA chromosome repeat_region1576444 710 + 0.46338
NA chromosome repeat_region1566236 710 + 0.464789
NA yt050 tRNA-Cyschromosome tRNA2701599 71 - 0.633803
NA yt015 tRNA-Thrchromosome tRNA534558 73 + 0.534247
NA yt073 tRNA-Secchromosome tRNA4494759 91 - 0.637363
NA chromosome repeat_region4108137 710 - 0.464789
NA chromosome repeat_region841556 591 + 0.467005
NA yt027 tRNA-Ilechromosome tRNA1026033 74 + 0.581081
NA chromosome repeat_region4350188 1451 - 0.47071
NA chromosome repeat_region4098246 710 - 0.464789
NA y2515 chromosome pseudo2774366 2073 - 0.501688
NA yt025 tRNA-Argchromosome tRNA995898 74 + 0.567568
NA y2050 chromosome pseudo2257244 1592 - 0.525754
NA chromosome repeat_region1258775 1954 - 0.51433
NA pMT-1 repeat_region2245 19 - 0.526316
NA yt053 tRNA-Asnchromosome tRNA2837679 73 + 0.520548
NA y2344 chromosome pseudo2578374 3043 - 0.489648
NA chromosome repeat_region3461141 1954 + 0.51433
NA chromosome repeat_region2377833 1315 - 0.488213
NA chromosome repeat_region1516796 710 + 0.464789
NA pMT-1 repeat_region617 19 - 0.421053
NA chromosome repeat_region1006659 710 + 0.46338
NA chromosome repeat_region3025325 1954 + 0.51433
NA y2041 chromosome pseudo2249088 1756 + 0.47836
NA chromosome repeat_region1133340 48 + 0.541667
NA chromosome repeat_region149966 710 - 0.464789
NA chromosome repeat_region393913 1315 - 0.488213
NA yr017 4.5S RNAchromosome rRNA1179164 114 + 0.631579
NA yt036 tRNA-Alachromosome tRNA1658581 79 - 0.620253
NA yt016 tRNA-Gluchromosome tRNA566935 73 + 0.60274
NA chromosome repeat_region4150035 1954 + 0.51433
NA yt042 tRNA-Argchromosome tRNA1733801 72 + 0.513889
NA y2795 chromosome pseudo3092351 3108 - 0.5074
NA Y1099 pMT-1 variation80247 4 + 0.75
NA pMT-1 variation70051 8 + 0.875
NA pMT-1 repeat_region449 19 + 0.473684
NA Y1013 pMT-1 variation10674 3 + 1
NA y0907 chromosome pseudo1013686 3117 - 0.501444
NA yt030 tRNA-Glnchromosome tRNA1342164 72 - 0.555556
NA y0022 chromosome pseudo34188 1777 - 0.468768
NA Y1016 pMT-1 variation11541 3 + 0.666667
NA yt038 tRNA-Valchromosome tRNA1661444 73 + 0.534247
NA pMT-1 repeat_region155 19 + 0.578947
NA yt034 tRNA-Leuchromosome tRNA1342615 82 - 0.573171
NA chromosome repeat_region1283468 710 + 0.464789
NA yt002 tRNA-Thrchromosome tRNA17169 73 + 0.561644
NA chromosome repeat_region1135342 667 + 0.457271
NA yt071 tRNA-Gluchromosome tRNA4244807 73 - 0.60274
NA chromosome repeat_region572559 1954 - 0.51433
NA yt040 tRNA-Valchromosome tRNA1661676 73 + 0.534247
NA yr003 5S ribosomal RNAchromosome rRNA17036 120 + 0.625
NA yt058 tRNA-Serchromosome tRNA3263286 85 - 0.505882
NA chromosome repeat_region2679386 1954 - 0.51433
NA chromosome repeat_region2952389 1315 + 0.488213
NA y2211 chromosome pseudo2441568 2820 - 0.486525
NA Y1009 pMT-1 variation8567 3 + 0.666667
NA pMT-1 repeat_region1883 19 - 0.421053
NA pMT-1 repeat_region1862 19 - 0.526316
NA chromosome repeat_region3456728 710 - 0.464789
NA chromosome repeat_region1520487 1315 + 0.488973
NA yt044 tRNA-Valchromosome tRNA2145410 74 - 0.581081
NA chromosome repeat_region1717669 1954 + 0.51433
NA yt029 tRNA-Argchromosome tRNA1249406 74 + 0.581081
NA y0343 chromosome pseudo378834 956 - 0.388075
NA pMT-1 repeat_region2265 19 - 0.421053
NA chromosome repeat_region999928 710 + 0.46338
NA yr014 16S ribosomal RNAchromosome rRNA1024389 1585 + 0.539432
NA y0358 chromosome pseudo398957 1496 - 0.506016
NA yr012 23S ribosomal RNAchromosome rRNA567263 2907 + 0.527348
NA chromosome repeat_region4232120 710 - 0.46338
NA Y1069 pMT-1 variation57449 2 + 0.5
NA y0900 chromosome pseudo1008655 1345 - 0.456506
NA chromosome repeat_region3825816 1443 - 0.469854
NA chromosome repeat_region303510 1954 + 0.51433
NA chromosome repeat_region3092957 1954 + 0.51433
NA yt059 tRNA-OTHERchromosome tRNA3361500 70 - 0.514286
NA chromosome repeat_region3536196 1954 - 0.51433
NA ys001 RNase P, RNA componentchromosome misc_RNA125522 377 - 0.612732
NA yr007 5S ribosomal RNAchromosome rRNA360950 120 + 0.625
NA yt066 tRNA-Metchromosome tRNA3471866 74 + 0.662162
NA chromosome repeat_region1929403 1315 - 0.488213
NA chromosome repeat_region2226433 1954 - 0.51433
NA chromosome repeat_region1271381 1315 + 0.488973
NA chromosome repeat_region2870489 1315 - 0.488213
NA pMT-1 repeat_region695 19 - 0.368421
NA chromosome repeat_region861626 710 + 0.464789
NA yr009 23S ribosomal RNAchromosome rRNA524459 2907 + 0.527004
NA chromosome repeat_region1785071 1315 + 0.488213
NA yt007 tRNA-Hischromosome tRNA420112 73 + 0.534247
NA Y1052 pMT-1 misc_feature45402 213 + 0.42723
NA chromosome repeat_region3326045 710 - 0.464789
NA chromosome repeat_region4239674 1315 - 0.488973
NA yt003 tRNA-Gluchromosome tRNA357608 73 + 0.60274
NA y1318 chromosome pseudo1465526 778 - 0.471722
NA pMT-1 variation72836 1 +
NA yt010 tRNA-Ilechromosome tRNA524037 74 + 0.581081
NA chromosome repeat_region1247348 710 + 0.464789
NA yt018 tRNA-Glychromosome tRNA704627 73 + 0.60274
NA y2719 chromosome pseudo3004992 1814 - 0.336825
NA y0521 chromosome pseudo590142 733 + 0.491132
NA pMT-1 repeat_region2222 19 - 0.473684
NA y1444 chromosome pseudo1601112 2493 + 0.530285
NA chromosome repeat_region2246416 1315 - 0.488973
NA y1819 chromosome pseudo1999898 1735 - 0.480115
NA chromosome repeat_region54361 262 - 0.423664
NA chromosome repeat_region2442512 1315 - 0.488973
NA yr004 5S ribosomal RNAchromosome rRNA17285 115 + 0.634783
NA chromosome repeat_region4217589 1954 + 0.51433
NA Y1056 pMT-1 variation48277 1 + 1
NA yr016 5S ribosomal RNAchromosome rRNA1029469 120 + 0.625
NA y4078 chromosome pseudo4522449 3069 - 0.518736
NA pMT-1 repeat_region72777 1954 + 0.51433
NA yt052 tRNA-Lyschromosome tRNA2708249 73 - 0.520548
NA yr006 23S ribosomal RNAchromosome rRNA357936 2907 + 0.526316
NA y1224 chromosome pseudo1375389 183 - 0.491803
NA yr002 23S ribosomal RNAchromosome rRNA14022 2907 + 0.52666
NA y2178 chromosome pseudo2408058 1575 + 0.464762
NA chromosome repeat_region2367544 501 - 0.473054
NA chromosome repeat_region421164 710 + 0.46338
NA chromosome repeat_region1466274 1954 + 0.51433
NA chromosome repeat_region3865059 710 - 0.46338
NA yt054 tRNA-Asnchromosome tRNA2851956 73 + 0.520548
NA chromosome repeat_region2841317 1315 - 0.488973
NA yt064 tRNA-Gluchromosome tRNA3415579 73 - 0.60274
NA chromosome repeat_region2578588 1954 - 0.51433
NA yr001 16S ribosomal RNAchromosome rRNA12016 1585 + 0.538801
NA y2614 chromosome pseudo2879650 1541 + 0.51525
NA y1079 chromosome pseudo1214946 1123 + 0.412289
NA chromosome repeat_region3991768 710 + 0.464789
NA pMT-1 variation70104 3 + 1
NA chromosome repeat_region1365154 1954 - 0.51433
NA yt063 tRNA-Aspchromosome tRNA3411993 74 - 0.635135
NA pMT-1 repeat_region1904 19 - 0.368421
NA chromosome repeat_region326721 1452 - 0.471074
NA yr023 23S ribosomal RNAchromosome rRNA4241645 2907 - 0.52666
NA yr010 5S ribosomal RNAchromosome rRNA527473 120 + 0.625
NA chromosome repeat_region4557487 1451 + 0.47071
NA chromosome repeat_region3226954 710 - 0.464789
NA y3473 chromosome pseudo3854304 2128 + 0.450188
NA yt033 tRNA-Glnchromosome tRNA1342511 72 - 0.541667
NA pMT-1 repeat_region242 19 + 0.368421
NA pMT-1 repeat_region1841 19 - 0.526316
NA yr024 16S ribosomal RNAchromosome rRNA4244973 1585 - 0.538801
NA chromosome repeat_region1658997 710 - 0.464789
NA Y1069 pMT-1 variation56339 3 + 0.666667
NA yt028 tRNA-Alachromosome tRNA1026161 73 + 0.643836
NA y1148 chromosome pseudo1296726 986 + 0.555781
NA chromosome repeat_region2691196 1301 - 0.481168
NA chromosome repeat_region54623 1954 - 0.51433
NA pMT-1 repeat_region410 19 + 0.421053
NA Y1055 pMT-1 variation47462 1 +
NA chromosome repeat_region2514921 710 - 0.46338
NA yt026 tRNA-Argchromosome tRNA996054 74 + 0.554054
NA yt017 tRNA-Phechromosome tRNA674907 73 - 0.589041
NA chromosome repeat_region4005619 1954 + 0.51433
NA yr018 5S ribosomal RNAchromosome rRNA3412190 120 - 0.625
NA chromosome repeat_region1959695 1315 + 0.488213
NA chromosome repeat_region238285 710 - 0.46338
NA pMT-1 repeat_region1819 19 - 0.368421
NA yt024 tRNA-Argchromosome tRNA995764 74 + 0.567568
NA chromosome repeat_region3774004 1954 + 0.51433
NA y3742 chromosome pseudo4161047 1319 - 0.54511
NA yt009 tRNA-Prochromosome tRNA420366 74 + 0.621622
NA ys003 spot 42 RNA, inhibition of DNA synthesischromosome misc_RNA4232828 107 - 0.420561
NA pMT-1 repeat_region1925 21 - 0.333333
NA chromosome repeat_region3735567 1442 + 0.47018
NA yt051 tRNA-Glychromosome tRNA2701725 73 - 0.60274
NA yt068 tRNA-Phechromosome tRNA3692004 73 + 0.589041
NA chromosome repeat_region1126519 710 + 0.464789
NA chromosome repeat_region4299991 710 - 0.46338
NA chromosome repeat_region4510826 1451 + 0.469332
NA chromosome repeat_region1351842 710 + 0.46338
NA chromosome repeat_region726408 1954 - 0.51433
NA yt022 tRNA-Leuchromosome tRNA834911 82 + 0.597561
NA chromosome repeat_region302324 1186 + 0.480607
NA yr005 16S ribosomal RNAchromosome rRNA355930 1585 + 0.539432
NA chromosome repeat_region548472 710 - 0.46338
NA y0079 chromosome pseudo87875 935 + 0.48877
NA chromosome repeat_region2142163 518 - 0.449807
NA chromosome repeat_region2368045 1954 + 0.51433
NA yt006 tRNA-Argchromosome tRNA419952 74 + 0.662162
NA y1543 chromosome pseudo1707317 4035 + 0.46741
NA chromosome repeat_region4440808 710 + 0.464789
NA yt023 tRNA-Serchromosome tRNA995663 90 + 0.6
NA yr022 5S ribosomal RNAchromosome rRNA4241418 120 - 0.625
NA chromosome repeat_region4033535 710 - 0.464789
NA yt014 tRNA-Glychromosome tRNA534477 72 + 0.541667
NA yt067 tRNA-Glychromosome tRNA3601512 71 - 0.535211
NA chromosome repeat_region1647936 710 + 0.46338
NA y0938 chromosome pseudo1050444 3305 + 0.519516
NA Y1099 pMT-1 variation80280 1 + 1
NA ys002 10Sa RNA (tmRNA)chromosome misc_RNA3388875 364 + 0.516484
NA y1694 chromosome pseudo1869687 1139 + 0.467954
NA chromosome repeat_region3020547 710 + 0.464789
NA pMT-1 misc_feature64109 25 + 0.4
NA yr019 23S ribosomal RNAchromosome rRNA3412417 2907 - 0.527004
NA y1243 chromosome pseudo1391413 967 + 0.481903
NA y0302 chromosome pseudo321789 1241 + 0.516519
NA chromosome repeat_region468728 709 + 0.465444
NA chromosome repeat_region531798 1954 + 0.51433
NA y2115 chromosome pseudo2332639 387 - 0.475452
NA Y1069 pMT-1 variation57361 1 + 1
NA Y1010 pMT-1 variation9487 3 + 0.666667
NA yt057 tRNA-Thrchromosome tRNA3263205 73 - 0.547945
NA chromosome repeat_region3389316 710 + 0.46338
NA pMT-1 repeat_region46383 1954 + 0.514841
NA chromosome repeat_region518719 710 + 0.46338
NA pMT-1 repeat_region323 19 + 0.421053
NA chromosome repeat_region2415629 1315 + 0.488973
NA yt065 tRNA-Metchromosome tRNA3471666 74 + 0.662162
NA Y1069 pMT-1 variation57533 1 + 1
NA yt039 tRNA-Valchromosome tRNA1661556 73 + 0.534247
NA chromosome repeat_region3400590 1954 + 0.51433
NA y0820 chromosome pseudo920396 727 + 0.497937
NA y2440 chromosome pseudo2700624 736 + 0.445652
NA chromosome repeat_region120157 1950 + 0.514359
NA pMT-1 rep_origin61661 274 + 0.405109
NA chromosome repeat_region4041474 710 + 0.46338
NA y0738 chromosome pseudo821858 1580 - 0.486709
NA chromosome repeat_region2140210 1954 - 0.514841
NA chromosome repeat_region4466830 1954 - 0.51433
NA yt013 tRNA-Tyrchromosome tRNA534243 82 + 0.585366
NA chromosome repeat_region776493 1441 + 0.469813
NA yt001 tRNA-Gluchromosome tRNA13694 73 + 0.60274
NA chromosome repeat_region3535992 206 + 0.432039
NA yt055 tRNA-Serchromosome tRNA3007878 85 - 0.6
NA yt020 tRNA-Leuchromosome tRNA769517 84 + 0.595238
NA yt062 tRNA-Aspchromosome tRNA3404626 74 - 0.675676
NA chromosome repeat_region1014091 1954 - 0.51433
NA Y1011 pMT-1 variation9802 4 + 0.75
NA y0269 chromosome pseudo285945 1313 - 0.581112
NA chromosome repeat_region2226219 215 + 0.44186
NA y1552 chromosome pseudo1717073 3336 + 0.501499
NA yt035 tRNA-Metchromosome tRNA1342707 74 - 0.554054
NA chromosome repeat_region730893 710 + 0.464789
NA yt008 tRNA-Leuchromosome tRNA420204 84 + 0.571429
NA yt032 tRNA-Glnchromosome tRNA1342353 72 - 0.541667
NA pMT-1 variation78024 1 + 1
NA yt049 tRNA-Leuchromosome tRNA2701503 83 - 0.590361
NA y0875 chromosome pseudo981951 1768 + 0.527715
NA y1382 chromosome pseudo1530280 1385 - 0.513357
NA Y1049 pMT-1 variation41703 3 + 0.666667
NA pMT-1 rep_origin151 1911 - 0.495552
caf1 Y1100 pMT-1 variation82098 1 +
caf1M Y1098 pMT-1 variation78890 1 + 1
caf1R Y1097 pMT-1 variation77814 1 + 1
parA Y1076.S pMT-1 misc_feature61836 551 + 0.441016