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2024-05-18 14:55:32

Gene list

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COG category: Cell motility
Organism: Escherichia coli APEC O1, APEC O1

Number of genes found: 126

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_2112 FimF protein precursorchromosome CDS4928715 534 + 0.490637
NA APECO1_3031 fimbrial chaperone protein precursorchromosome CDS3857029 780 - 0.380769
NA APECO1_510 putative bacteriophage proteinchromosome CDS1480490 486 + 0.407407
NA APECO1_612 hypothetical proteinchromosome CDS1607910 285 - 0.526316
NA APECO1_3370 hypothetical proteinchromosome CDS3486433 564 + 0.443262
NA APECO1_3921 putative Mg2+ and Co2+ transporter CorBchromosome CDS2907933 1242 + 0.512882
NA APECO1_1182 hypothetical proteinchromosome CDS2274092 1050 + 0.380952
NA APECO1_2026 putative protease/scaffold proteinchromosome CDS5028569 2178 + 0.517906
NA APECO1_2279 putative hemolysin activator proteinchromosome CDS4744842 411 + 0.510949
NA APECO1_632 outer membrane usher protein FimD precursorchromosome CDS1637395 2652 - 0.442308
NA APECO1_451 putative outer membrane channel proteinchromosome CDS1415309 1374 + 0.537846
NA APECO1_569 hypothetical proteinchromosome CDS1555829 471 + 0.530786
NA APECO1_633 chaperone protein fimC precursorchromosome CDS1640088 720 - 0.452778
aer APECO1_3344 aerotaxis sensor receptor, flavoproteinchromosome CDS3518261 1521 - 0.550296
aufA APECO1_3030 Auf fimbriae major subunit precursor AufAchromosome CDS3857882 705 - 0.476596
aufC APECO1_3032 outer membrane usher protein precursor AufCchromosome CDS3854398 2595 - 0.420424
aufD APECO1_3033 Auf fimbriae minor subunit precursor AufDchromosome CDS3853835 573 - 0.38918
aufF APECO1_3036 Auf fimbrial chaperone 2 precursor AufFchromosome CDS3852560 333 - 0.381381
aufF APECO1_3035 Auf fimbrial chaperone 2 precursor AufFchromosome CDS3853030 339 - 0.40708
betA APECO1_1679 choline dehydrogenasechromosome CDS353117 1605 - 0.582555
cheA APECO1_936 chemotaxis protein CheAchromosome CDS1979119 2004 - 0.530938
cheB APECO1_932 protein-glutamate methylesterasechromosome CDS1974586 1050 - 0.535238
cheR APECO1_933 chemotaxis regulator, protein-glutamate methyltransferasechromosome CDS1975638 861 - 0.54007
cheW APECO1_935 positive regulator of CheA protein activitychromosome CDS1978595 504 - 0.521825
cheZ APECO1_930 chemotaxis regulator, protein phosphatase for CheYchromosome CDS1973527 645 - 0.537984
cusC APECO1_1476 probable outer membrane lipoprotein CusC precursorchromosome CDS582777 1383 + 0.515546
ddg APECO1_4159 lipid A biosynthesis palmitoleoyl acyltransferasechromosome CDS2629449 921 + 0.515744
ecpD APECO1_1845 predicted periplasmic pilin chaperonechromosome CDS161474 741 - 0.442645
fhiA APECO1_1740 FhiA proteinchromosome CDS280336 1740 - 0.567816
fimA APECO1_2116 type 1 fimbriae major subunit FimAchromosome CDS4924029 612 + 0.493464
fimA APECO1_2111 P pilus assembly protein, pilin FimAchromosome CDS4929255 510 + 0.519608
fimC APECO1_2114 type I fimbrial chaperonechromosome CDS4925281 726 + 0.444904
fimD APECO1_2113 outer membrane usher protein FimD precursorchromosome CDS4926072 2637 + 0.482746
fimI APECO1_2115 FimI fimbrial proteinchromosome CDS4924582 663 + 0.505279
flgC APECO1_156 flagellar component of cell-proximal portion of basal-body rodchromosome CDS1113794 405 + 0.530864
flgD APECO1_157 flagellar hook formation protein FlgDchromosome CDS1114210 696 + 0.543103
flgE APECO1_158 flagellar biosynthesis, hook protein FlgEchromosome CDS1114930 1206 + 0.513267
flgF APECO1_159 flagellar basal-body rod protein FlgFchromosome CDS1116155 756 + 0.59127
flgG APECO1_160 flagellar basal-body rod protein FlgGchromosome CDS1117082 783 + 0.536398
flgH APECO1_161 flagellar basal body L-ring protein precursorchromosome CDS1117908 708 + 0.526836
flgI APECO1_162 flagella basal body P-ring-like protein FlgIchromosome CDS1118624 1101 + 0.542234
flgJ APECO1_163 peptidoglycan hydrolase FlgJchromosome CDS1119694 972 + 0.538066
flgK APECO1_164 hook-filament junction protein FlgKchromosome CDS1120731 1644 + 0.520073
flgL APECO1_165 flagellar hook-associated protein FlgLchromosome CDS1122386 954 + 0.505241
flgM APECO1_153 FlgMchromosome CDS1112191 294 - 0.517007
flhA APECO1_928 flagellar biosynthesis protein FlhAchromosome CDS1970099 2154 - 0.547818
flhB APECO1_929 flagellar biosynthesis protein Bchromosome CDS1972170 1149 - 0.550914
fliC APECO1_964 flagellinchromosome CDS2007082 1758 - 0.48066
fliD APECO1_965 flagellar capping proteinchromosome CDS2009105 1407 + 0.517413
fliE APECO1_976 Flagellar hook-basal body complex protein fliEchromosome CDS2020023 315 - 0.549206
fliG APECO1_978 flagellar motor switch protein Gchromosome CDS2022204 996 + 0.562249
fliH APECO1_979 flagellar assembly proteinchromosome CDS2023192 687 + 0.577875
fliI APECO1_980 flagellum-specific ATP synthasechromosome CDS2023878 1374 + 0.583697
fliJ APECO1_981 flagellar FliJ proteinchromosome CDS2025270 444 + 0.52027
fliK APECO1_982 flagellar hook-length control proteinchromosome CDS2025710 1128 + 0.545213
fliL APECO1_983 flagellar protein FliLchromosome CDS2026942 465 + 0.531183
fliM APECO1_984 Flagellar motor switch proteinchromosome CDS2027366 1050 + 0.527619
fliN APECO1_985 Flagellar motor switch proteinchromosome CDS2028412 414 + 0.565217
fliP APECO1_987 flagellar assembly protein FliPchromosome CDS2029193 738 + 0.525745
fliQ APECO1_988 flagellar biosynthetic protein FliQchromosome CDS2029940 270 + 0.507407
fliS APECO1_966 flagellar protein FliSchromosome CDS2010536 411 + 0.481752
fmlA APECO1_634 putative Fml fimbriae subunitchromosome CDS1641160 564 - 0.466312
ftsY APECO1_2989 cell division protein FtsYchromosome CDS3901864 1497 - 0.533066
gspC APECO1_3457 putative type II secretion protein GspCchromosome CDS3388651 843 - 0.525504
gspD APECO1_3458 putative type II secretion protein GspDchromosome CDS3386561 2061 - 0.545366
gspE APECO1_3459 putative type II secretion protein GspEchromosome CDS3385068 1494 - 0.572959
gspF APECO1_3460 putative type II secretion protein GspFchromosome CDS3383845 1224 - 0.585784
gspG APECO1_3461 putative type II secretion protein GspGchromosome CDS3383373 456 - 0.526316
gspH APECO1_3462 putative type II secretion protein GspHchromosome CDS3382806 564 - 0.556738
gspK APECO1_3465 putative type II secretion protein GspKchromosome CDS3380862 978 - 0.556237
gspL APECO1_3466 putative type II secretion protein GspLchromosome CDS3379687 1179 - 0.568278
gspM APECO1_3467 putative secretion pathway protein GspMchromosome CDS3379149 537 - 0.528864
hofC APECO1_1883 assembly protein in type IV pilin biogenesis, transmembrane proteinchromosome CDS116826 1203 - 0.521197
hofD APECO1_3127 putative general secretion pathway protein D precursorchromosome CDS3747108 1965 + 0.498219
hofD APECO1_3117 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3756307 678 + 0.504425
hofE APECO1_3126 putative general secretion pathway protein Echromosome CDS3749580 984 + 0.541667
hofF APECO1_3125 putative general secretion pathway protein Fchromosome CDS3750560 1197 + 0.506266
hofG APECO1_3124 putative general secretion pathway protein G precursorchromosome CDS3751766 438 + 0.493151
hofI APECO1_3122 putative general secretion pathway protein I precursorchromosome CDS3752678 435 + 0.487356
hofJ APECO1_3121 putative general secretion pathway protein J precursorchromosome CDS3753105 588 + 0.5
hofK APECO1_3120 putative general secretion pathway protein Kchromosome CDS3754120 552 + 0.483696
hofQ APECO1_3072 putative transport protein HofQ precursorchromosome CDS3804910 1239 - 0.536723
htrB APECO1_137 HtrBchromosome CDS1098015 921 - 0.534202
lepA APECO1_3962 GTP-binding elongation factor LepAchromosome CDS2859400 1800 - 0.532778
lpxK APECO1_27 LpxKchromosome CDS971838 987 + 0.552178
malK APECO1_2433 maltose/maltodextrin transport ATP-binding protein MalKchromosome CDS4569690 1206 + 0.544776
mbhA APECO1_1739 putative motility protein MbhAchromosome CDS282020 786 + 0.524173
motA APECO1_938 flagellar motor protein MotAchromosome CDS1982011 888 - 0.51464
motB APECO1_937 chemotaxis MotB proteinchromosome CDS1981088 927 - 0.530744
msbB APECO1_905 myristoyl acyltransferase; (KDO)2-(lauroyl)-lipid IVA acyltransferasechromosome CDS1947136 972 - 0.50823
papA APECO1_3519 major fibrial proteinchromosome CDS3323359 570 - 0.419298
papC APECO1_3521 outer membrane usher protein PapCchromosome CDS3320140 2520 - 0.52381
papD APECO1_3522 pilus assembly protein chaperone PapDchromosome CDS3319335 735 - 0.455782
papK APECO1_3524 pilus assembly protein PapKchromosome CDS3318171 537 - 0.541899
ppdA APECO1_3679 prepilin peptidase dependent protein A precursorchromosome CDS3171238 471 - 0.541401
pppA APECO1_3455 putative prepilin peptidase Achromosome CDS3390104 906 - 0.522075
pppD APECO1_1881 predicted major pilin subunitchromosome CDS119413 441 - 0.526077
secA APECO1_1888 translocasechromosome CDS110702 2706 + 0.521434
secB APECO1_2846 protein-export protein SecBchromosome CDS4078172 528 - 0.498106
sohB APECO1_432 possible protease SohBchromosome CDS1388193 1050 + 0.504762
sppA APECO1_835 protease IVchromosome CDS1862310 1857 + 0.51804
tar APECO1_934 methyl-accepting chemotaxis protein IIchromosome CDS1976789 1662 - 0.522864
tatB APECO1_2618 sec-independent translocase TatBchromosome CDS4340660 516 + 0.54845
tatC APECO1_2617 TatABCE protein translocation system subunit TatCchromosome CDS4341178 777 + 0.519949
tolC APECO1_3378 TolC outer membrane-associated proteinchromosome CDS3476755 1488 + 0.513441
tsr APECO1_2072 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4981953 1656 + 0.54529
ugpC APECO1_3009 SN-glycerol-3-phosphate transport ATP-binding protein UgpCchromosome CDS3882141 1071 - 0.57423
wzc APECO1_1150 protein-tyrosine kinasechromosome CDS2220644 2199 - 0.525693
yadM APECO1_1847 putative fimbrial-like adhesin proteinchromosome CDS158268 567 - 0.414462
yadN APECO1_1844 putative fimbrial-like adhesin proteinchromosome CDS162323 615 - 0.426016
ybaQ APECO1_1529 predicted DNA-binding transcriptional regulatorchromosome CDS525499 342 + 0.450292
ycjV APECO1_471 hypothetical ABC transporter ATP-binding protein YcjVchromosome CDS1438051 1083 + 0.498615
ydeS APECO1_631 predicted fimbrial-like adhesin proteinchromosome CDS1636851 531 - 0.435028
yehB APECO1_4437 putative outer membrane usher protein YehB precursorchromosome CDS2301964 2481 - 0.451431
yehC APECO1_4436 putative fimbrial chaperone YehC precursorchromosome CDS2304460 675 - 0.38963
yfcS APECO1_4229 putative periplasmic chaperone YfcS precursorchromosome CDS2556944 753 - 0.555113
yfcU APECO1_4228 putative outer membrane usher YfcU precursorchromosome CDS2557716 2655 - 0.543503
yggR APECO1_3571 hypothetical proteinchromosome CDS3288837 981 - 0.549439
yghS APECO1_3436 putative ATP-binding protein YghSchromosome CDS3416963 714 - 0.497199
yheK APECO1_3119 putative general secretion pathway protein Lchromosome CDS3754686 1164 + 0.482818
yjcP APECO1_2371 putative multidrug efflux system componentchromosome CDS4646229 1467 - 0.559646
yohG APECO1_4411 putative channel/filament proteinchromosome CDS2341290 1518 - 0.542819
yqiG APECO1_3369 putative outer membrane usher protein YqiG precursorchromosome CDS3487083 2523 + 0.468886
yqiH APECO1_3368 putative periplasmic chaperone YqiH precursorchromosome CDS3489612 750 + 0.478667
yrbC APECO1_3243 hypothetical proteinchromosome CDS3629846 636 - 0.522013
yrbF APECO1_3240 putative toluene transporter subunit: ATP-binding componentchromosome CDS3631846 810 - 0.545679