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2024-05-18 08:51:07

Gene list

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COG category: Cell motility
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 82

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_0947 putative fimbrial-like proteinchromosome CDS1021484 564 + 0.47695
NA SSON_2391 putative minor fimbrial subunitchromosome CDS2521916 525 - 0.457143
NA SSON_2420 putative tail component of prophagechromosome CDS2558317 741 - 0.578947
NA SSO_P144 adhesion protein, fragmentpSS_046 CDS129560 258 + 0.391473
NA SSON_1980 hypothetical proteinchromosome CDS2081218 279 + 0.437276
NA SSON_2436 putative endopeptidasechromosome CDS2571789 459 - 0.51634
NA SSON_3900 putative fimbrial chaperonechromosome CDS4116983 303 + 0.376238
NA SSON_0026 hypothetical proteinchromosome CDS25267 369 - 0.384824
NA SSON_0024 hypothetical proteinchromosome CDS23714 804 - 0.402985
cheA SSON_1229 sensory transducer kinase between chemo- signal receptors and CheB and CheYchromosome CDS1302515 1965 + 0.531298
cheB SSON_1234 response regulator for chemotaxischromosome CDS1309338 1050 + 0.537143
cheR SSON_1233 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1308475 861 + 0.537747
cheW SSON_1230 positive regulator of CheA protein activitychromosome CDS1304500 504 + 0.515873
cheZ SSON_1236 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorchromosome CDS1310802 645 + 0.533333
csgA SSON_1053 curlin major subunitchromosome CDS1133630 453 + 0.507726
ecpD SSON_0152 probable pilin chaperone similar to PapDchromosome CDS169651 741 - 0.442645
fhiA SSON_0273 flagellar biosynthesischromosome CDS299468 1740 - 0.574713
flgA SSON_1092 flagellar protein for assembly of basal-body periplasmic P ringchromosome CDS1171509 660 - 0.527273
flgB SSON_1093 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172323 417 + 0.534772
flgC SSON_1094 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172743 405 + 0.533333
flgD SSON_1095 flagellar protein for initiation of hook assemblychromosome CDS1173159 696 + 0.548851
flgE SSON_1096 flagellar hook proteinchromosome CDS1173879 1206 + 0.515755
flgF SSON_1097 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1175104 756 + 0.589947
flgH SSON_1099 flagellar protein for basal-body outer-membrane L ringchromosome CDS1176856 699 + 0.53505
flgI SSON_1100 P-ring of flagella basal bodychromosome CDS1177566 1098 + 0.540073
flgJ SSON_1101 flagellar biosynthesis proteinchromosome CDS1178663 942 + 0.544586
flgK SSON_1102 flagellar hook-filament junction protein 1chromosome CDS1179670 1644 + 0.51764
flgL SSON_1103 flagellar hook-filament junction proteinchromosome CDS1181325 954 + 0.507338
flgM SSON_1091 flagellar proteinchromosome CDS1171140 294 - 0.520408
flgN SSON_1090 protein of flagellar biosynthesischromosome CDS1170719 417 - 0.479616
flhB SSON_1240 putative part of export apparatus for flagellar proteinschromosome CDS1314044 972 + 0.544239
fliC SSON_1193 flagellar filament structural proteinchromosome CDS1271890 1575 + 0.428571
fliE SSON_1995 flagellar basal-body componentchromosome CDS2093645 315 - 0.539683
fliF SSON_1996 flagellar basal-body MS(membrane and supramembrane)-ring and collar proteinchromosome CDS2094175 1659 + 0.546715
fliG SSON_1997 FliGchromosome CDS2095826 996 + 0.557229
fliH SSON_1998 flagellar biosynthesis proteinchromosome CDS2096793 708 + 0.573446
fliI SSON_1999 flagellum-specific ATP synthasechromosome CDS2097500 1374 + 0.580058
fliJ SSON_2000 flagellar fliJ proteinchromosome CDS2098892 444 + 0.527027
fliK SSON_2001 flagellar hook-length control proteinchromosome CDS2099332 1128 + 0.549645
fliL SSON_2002 flagellar biosynthesischromosome CDS2100564 465 + 0.526882
fliM SSON_2003 flagellar motor switch protein FliMchromosome CDS2101033 1005 + 0.529353
fliN SSON_2004 FliNchromosome CDS2102034 414 + 0.548309
fliO SSON_2005 flagellar biosynthesischromosome CDS2102450 366 + 0.54918
fliP SSON_2006 flagellar biosynthesischromosome CDS2102815 738 + 0.531165
fliQ SSON_2007 flagellar biosynthesischromosome CDS2103562 270 + 0.514815
fliR SSON_2008 flagellar biosynthesischromosome CDS2103840 786 + 0.477099
fliS SSON_1981 flagellar repressor of class 3a and 3b operonschromosome CDS2081511 411 + 0.493917
hofC SSON_0114 putative integral membrane proteinchromosome CDS123749 1203 - 0.526185
lpfA SSON_3899 putative major fimbrial subunitchromosome CDS4116363 573 + 0.47644
mbhA SSON_0272 putative motility proteinchromosome CDS301152 786 + 0.52799
motA SSON_1227 proton conductor component of motorchromosome CDS1300700 888 + 0.51464
motB SSON_1228 MotBchromosome CDS1301584 927 + 0.528587
mxiD SSO_P107 MxiDpSS_046 CDS97171 1701 + 0.33157
ppdA SSON_2983 prepilin peptidase dependent protein Achromosome CDS3133322 471 - 0.541401
ppdD SSON_0116 prelipin peptidase dependent proteinchromosome CDS126337 441 - 0.52381
sfmF SSON_0507 putative fimbrial-like proteinchromosome CDS536175 516 + 0.498062
spa33 SSO_P114 Spa33pSS_046 CDS105030 882 + 0.316327
spa40 SSO_P117 Spa40pSS_046 CDS107618 1029 + 0.316812
spa47 SSO_P111 Spa47pSS_046 CDS102448 1293 + 0.392111
spy SSON_1414 periplasmic protein related to spheroblast formationchromosome CDS1489467 462 + 0.519481
tap SSON_1232 methyl-accepting chemotaxis protein IVchromosome CDS1306855 1602 + 0.535581
tar SSON_1231 methyl-accepting chemotaxis protein IIchromosome CDS1305148 1662 + 0.529483
trg SSON_1721 methyl-accepting chemotaxis protein IIIchromosome CDS1823714 1641 - 0.511274
yadN SSON_0153 putative fimbrial-like proteinchromosome CDS170496 585 - 0.441026
ybgD SSON_0670 putative fimbrial-like proteinchromosome CDS712918 567 - 0.477954
ybgP SSON_0668 putative chaperonechromosome CDS709663 732 - 0.495902
ycbF SSON_0948 putative chaperonechromosome CDS1022013 738 + 0.51897
ycbQ SSON_0942 putative fimbrial-like proteinchromosome CDS1015950 552 + 0.434783
ycbR SSON_0943 putative chaperonechromosome CDS1016584 702 + 0.451567
yehC SSON_2159 putative chaperonechromosome CDS2263400 720 - 0.391667
yehD SSON_2160 putative fimbrial-like proteinchromosome CDS2264154 543 - 0.405157
yfcS SSON_2393 putative chaperonechromosome CDS2523427 645 - 0.486822
yfcU SSON_2394 PapC-like porin proteinchromosome CDS2524198 2643 - 0.510027
yggR SSON_3105 putative protein transportchromosome CDS3265817 1026 - 0.54386
ygiL SSON_3180 putative fimbrial-like proteinchromosome CDS3338921 552 + 0.443841
yifL SSON_3981 hypothetical proteinchromosome CDS4203744 204 + 0.52451
yiiO SSON_4083 Uncharacterized periplasmic proteinchromosome CDS4319859 504 + 0.5
yjaI SSON_4175 hypothetical proteinchromosome CDS4419475 567 - 0.516755
yqiH SSON_3183 hypothetical proteinchromosome CDS3342966 759 + 0.389987
yraJ SSON_3289 putative outer membrane proteinchromosome CDS3464292 2517 + 0.473977
yraK SSON_3291 putative fimbrial proteinchromosome CDS3468293 954 + 0.474843
yrbF SSON_3343 putative ATP-binding component of a transport systemchromosome CDS3518330 810 - 0.545679