Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 315
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | c0563 | hypothetical protein | chromosome | CDS | 542302 | 510 | + | 0.460784 |
NA | c3607 | hypothetical protein | chromosome | CDS | 3445858 | 1500 | + | 0.539333 |
NA | c0273 | Putative radC-like protein yeeS | chromosome | CDS | 259552 | 492 | - | 0.577236 |
NA | c1248 | hypothetical protein | chromosome | CDS | 1196895 | 1038 | - | 0.442197 |
NA | c5469 | Transposase | chromosome | CDS | 5210429 | 510 | + | 0.460784 |
NA | c1225 | Transposase insE for insertion sequence IS3A/B/C/D/E/fA/fB | chromosome | CDS | 1175364 | 225 | - | 0.506667 |
NA | c5168 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 4932812 | 327 | - | 0.535168 |
NA | c2449 | Prophage P4 integrase | chromosome | CDS | 2262986 | 1272 | + | 0.513365 |
NA | c1425 | hypothetical protein | chromosome | CDS | 1340428 | 186 | + | 0.510753 |
NA | c0138 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 131044 | 327 | + | 0.535168 |
NA | c4507 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 4293266 | 813 | + | 0.504305 |
NA | c0291 | hypothetical protein | chromosome | CDS | 271030 | 609 | + | 0.428571 |
NA | c1444 | Prophage Qin DNA packaging protein NU1 homolog | chromosome | CDS | 1348728 | 510 | + | 0.468627 |
NA | c5371 | Prophage P4 integrase | chromosome | CDS | 5115549 | 1152 | + | 0.491319 |
NA | c0367 | hypothetical protein | chromosome | CDS | 347299 | 477 | - | 0.433962 |
NA | c3611 | insertion sequence 2 OrfB protein | chromosome | CDS | 3451366 | 906 | - | 0.550773 |
NA | c5178 | Putative Transposase for IS629 | chromosome | CDS | 4939758 | 888 | + | 0.545045 |
NA | c3594 | Putative Transposase | chromosome | CDS | 3439254 | 519 | - | 0.522158 |
NA | c0262 | hypothetical protein | chromosome | CDS | 253450 | 186 | + | 0.564516 |
NA | c0355 | hypothetical protein | chromosome | CDS | 333750 | 297 | + | 0.521886 |
NA | c3641 | Unknown in ISEc8 | chromosome | CDS | 3480612 | 351 | + | 0.529915 |
NA | c5214 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 4967544 | 327 | - | 0.535168 |
NA | c0258 | Unknown in ISEc8 | chromosome | CDS | 250595 | 648 | + | 0.54784 |
NA | c1427 | hypothetical protein | chromosome | CDS | 1341649 | 510 | + | 0.460784 |
NA | c3597 | Transposase | chromosome | CDS | 3441312 | 591 | - | 0.529611 |
NA | c1213 | hypothetical protein | chromosome | CDS | 1167823 | 564 | + | 0.558511 |
NA | c2212 | Probable ATP-dependent helicase yoaA | chromosome | CDS | 2042997 | 1911 | - | 0.55573 |
NA | c0391 | CP4-like integrase | chromosome | CDS | 370454 | 339 | + | 0.457227 |
NA | c3671 | Putative radC-like protein yeeS | chromosome | CDS | 3505352 | 492 | + | 0.583333 |
NA | c1593 | hypothetical protein | chromosome | CDS | 1445744 | 291 | + | 0.395189 |
NA | c2334 | Transposase | chromosome | CDS | 2148324 | 510 | - | 0.460784 |
NA | c0430 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 414420 | 603 | - | 0.422886 |
NA | c0349 | Putative Transposase within prophage | chromosome | CDS | 324082 | 1125 | + | 0.507556 |
NA | c3616 | Unknown in ISEc8 | chromosome | CDS | 3454615 | 351 | - | 0.524217 |
NA | c2497 | Transposase | chromosome | CDS | 2336638 | 858 | - | 0.505827 |
NA | c0352 | Partial Transposase | chromosome | CDS | 331417 | 207 | - | 0.502415 |
NA | c0354 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 332304 | 327 | - | 0.535168 |
NA | c3595 | Transposase | chromosome | CDS | 3439784 | 357 | - | 0.54902 |
NA | c2503 | Transposase | chromosome | CDS | 2341416 | 1197 | + | 0.577277 |
NA | c0257 | Unknown in ISEc8 | chromosome | CDS | 250214 | 351 | + | 0.532764 |
NA | c0198 | Transposase | chromosome | CDS | 192782 | 510 | + | 0.462745 |
NA | c5167 | Putative Transposase for IS629 | chromosome | CDS | 4932138 | 678 | - | 0.551622 |
NA | c1530 | hypothetical protein | chromosome | CDS | 1403622 | 1500 | - | 0.539333 |
NA | c5196 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4952414 | 291 | + | 0.498282 |
NA | c4513 | hypothetical protein | chromosome | CDS | 4298906 | 753 | - | 0.466135 |
NA | c5152 | Putative radC-like protein yeeS | chromosome | CDS | 4924822 | 477 | - | 0.587002 |
NA | c2496 | hypothetical protein | chromosome | CDS | 2336398 | 162 | - | 0.506173 |
NA | c0233 | hypothetical protein | chromosome | CDS | 226983 | 531 | - | 0.463277 |
NA | c3614 | hypothetical protein | chromosome | CDS | 3452972 | 186 | - | 0.548387 |
NA | c3662 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3498838 | 1104 | + | 0.57337 |
NA | c3703 | Transposase insG for insertion sequence element IS4 | chromosome | CDS | 3532771 | 1350 | - | 0.536296 |
NA | c2473 | Transposase | chromosome | CDS | 2315775 | 480 | + | 0.475 |
NA | c3576 | Unknown in IS | chromosome | CDS | 3426785 | 303 | - | 0.462046 |
NA | c1520 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1398656 | 327 | + | 0.535168 |
NA | c0767 | hypothetical protein | chromosome | CDS | 749807 | 459 | + | 0.457516 |
NA | c0072 | Transposase | chromosome | CDS | 67723 | 510 | + | 0.460784 |
NA | c2405 | hypothetical protein | chromosome | CDS | 2207572 | 1182 | - | 0.334179 |
NA | c0139 | Putative Transposase for IS629 | chromosome | CDS | 131367 | 891 | + | 0.542088 |
NA | c1256 | hypothetical protein | chromosome | CDS | 1208636 | 510 | + | 0.460784 |
NA | c1291 | hypothetical protein | chromosome | CDS | 1239426 | 510 | + | 0.462745 |
NA | c3660 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3498471 | 348 | + | 0.551724 |
NA | c1483 | Putative integrase of prophage | chromosome | CDS | 1378215 | 945 | + | 0.508995 |
NA | c5145 | hypothetical protein | chromosome | CDS | 4921500 | 756 | + | 0.537037 |
NA | c4573 | Putative radC-like protein yeeS | chromosome | CDS | 4338795 | 447 | + | 0.583893 |
NA | c2160 | CTP pyrophosphohydrolase | chromosome | CDS | 1995334 | 408 | + | 0.54902 |
NA | c4541 | Putative maturase-related protein | chromosome | CDS | 4321110 | 522 | + | 0.55364 |
NA | c5383 | hypothetical protein | chromosome | CDS | 5128919 | 672 | - | 0.433036 |
NA | c5373 | hypothetical protein | chromosome | CDS | 5120028 | 2013 | - | 0.464481 |
NA | c0397 | InsB protein | chromosome | CDS | 377117 | 177 | + | 0.474576 |
NA | c0259 | hypothetical protein | chromosome | CDS | 251193 | 951 | + | 0.521556 |
NA | c1218 | hypothetical protein | chromosome | CDS | 1170358 | 504 | - | 0.496032 |
NA | c3152 | hypothetical protein | chromosome | CDS | 3026388 | 510 | - | 0.462745 |
NA | c1552 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1415867 | 327 | + | 0.535168 |
NA | c3556 | Prophage P4 integrase | chromosome | CDS | 3406498 | 1266 | + | 0.485782 |
NA | c0119 | Putative Transposase insK for insertion sequence element IS150 | chromosome | CDS | 115993 | 723 | + | 0.489627 |
NA | c3580 | hypothetical protein | chromosome | CDS | 3427964 | 393 | + | 0.56743 |
NA | c1452 | hypothetical protein | chromosome | CDS | 1355885 | 432 | + | 0.560185 |
NA | c2898 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 2758106 | 570 | + | 0.331579 |
NA | c4508 | hypothetical protein | chromosome | CDS | 4294099 | 186 | + | 0.553763 |
NA | c3596 | Hypothetical protein in IS | chromosome | CDS | 3440140 | 327 | - | 0.529052 |
NA | c0261 | hypothetical protein | chromosome | CDS | 252253 | 1134 | - | 0.461199 |
NA | c2254 | exodeoxyribonuclease X | chromosome | CDS | 2077743 | 717 | + | 0.516039 |
NA | c2257 | hypothetical protein | chromosome | CDS | 2080602 | 603 | + | 0.515755 |
NA | c1529 | hypothetical protein | chromosome | CDS | 1402870 | 756 | - | 0.537037 |
NA | c0256 | hypothetical protein | chromosome | CDS | 249923 | 222 | + | 0.441441 |
NA | c0263 | Putative Transposase | chromosome | CDS | 253783 | 687 | + | 0.54294 |
NA | c2622 | Transposase | chromosome | CDS | 2467471 | 510 | - | 0.462745 |
NA | c1262 | Putative Transposase for IS629 | chromosome | CDS | 1212504 | 891 | - | 0.542088 |
NA | c2509 | Insertion sequence ATP-binding protein | chromosome | CDS | 2344917 | 756 | + | 0.537037 |
NA | c3578 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3427567 | 348 | + | 0.586207 |
NA | c3659 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3497824 | 648 | + | 0.540123 |
NA | c1521 | Putative Transposase for IS629 | chromosome | CDS | 1398979 | 891 | + | 0.542088 |
NA | c3563 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3411690 | 1119 | + | 0.602324 |
NA | c3803 | Putative Transposase | chromosome | CDS | 3639888 | 453 | - | 0.461369 |
NA | c1553 | Putative Transposase for IS629 | chromosome | CDS | 1416190 | 891 | + | 0.542088 |
NA | c1513 | Putative Nudix hydrolase ymfB | chromosome | CDS | 1394721 | 462 | - | 0.512987 |
NA | c5382 | hypothetical protein | chromosome | CDS | 5128222 | 714 | + | 0.378151 |
NA | c3146 | Putative DNA-invertase from lambdoid prophage Rac | chromosome | CDS | 3021386 | 591 | + | 0.446701 |
NA | c2418 | Prophage P4 integrase | chromosome | CDS | 2218378 | 1044 | + | 0.528736 |
NA | c4552 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4329034 | 336 | + | 0.514881 |
NA | c1219 | Putative Transposase | chromosome | CDS | 1170833 | 750 | - | 0.534667 |
NA | c5375 | hypothetical protein | chromosome | CDS | 5122185 | 159 | - | 0.578616 |
NA | c5172 | hypothetical protein | chromosome | CDS | 4934476 | 741 | + | 0.520918 |
NA | c3612 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 3452264 | 375 | - | 0.482667 |
NA | c4503 | Insertion element IS1 1/2/3/5/6 protein insA | chromosome | CDS | 4289968 | 273 | + | 0.479853 |
NA | c3468 | hypothetical protein | chromosome | CDS | 3329981 | 510 | - | 0.460784 |
NA | c3204 | hypothetical protein | chromosome | CDS | 3064143 | 1173 | + | 0.436488 |
NA | c3640 | Unknown in ISEc8 | chromosome | CDS | 3480253 | 363 | + | 0.512397 |
NA | c3613 | hypothetical protein | chromosome | CDS | 3452810 | 159 | + | 0.509434 |
NA | c3432 | Transposase | chromosome | CDS | 3283735 | 339 | - | 0.466077 |
NA | c2472 | Transposase | chromosome | CDS | 2315404 | 267 | + | 0.47191 |
NA | c0264 | hypothetical protein | chromosome | CDS | 254517 | 255 | + | 0.490196 |
NA | c0364 | hypothetical protein | chromosome | CDS | 345925 | 483 | + | 0.283644 |
NA | c3684 | hypothetical protein | chromosome | CDS | 3511126 | 156 | + | 0.480769 |
NA | c4511 | hypothetical protein | chromosome | CDS | 4296883 | 726 | - | 0.431129 |
NA | c1819 | hypothetical protein | chromosome | CDS | 1650652 | 309 | - | 0.508091 |
NA | c5198 | hypothetical protein | chromosome | CDS | 4953372 | 171 | + | 0.479532 |
NA | c2512 | Transposase | chromosome | CDS | 2347930 | 1023 | - | 0.527859 |
NA | c0366 | hypothetical protein | chromosome | CDS | 346889 | 270 | - | 0.388889 |
NA | c1168 | Unknown in IS1N | chromosome | CDS | 1131407 | 393 | + | 0.470738 |
NA | c3617 | Unknown in putative ISEc8 | chromosome | CDS | 3454962 | 438 | - | 0.490868 |
NA | c1268 | hypothetical protein | chromosome | CDS | 1218879 | 183 | - | 0.557377 |
NA | c3206 | hypothetical protein | chromosome | CDS | 3065702 | 816 | - | 0.393382 |
NA | c1263 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1213391 | 327 | - | 0.535168 |
NA | c0268 | hypothetical protein | chromosome | CDS | 256927 | 756 | + | 0.537037 |
NA | c5175 | hypothetical protein | chromosome | CDS | 4938218 | 132 | - | 0.439394 |
NA | c0941 | DNA adenine methylase | chromosome | CDS | 914250 | 858 | + | 0.4662 |
NA | c5197 | Transposase insD for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4952728 | 648 | + | 0.529321 |
NA | c1400 | Prophage lambda integrase | chromosome | CDS | 1328014 | 1119 | - | 0.452189 |
NA | c5216 | Prophage P4 integrase | chromosome | CDS | 4970125 | 1263 | - | 0.490103 |
NA | c2529 | Putative radC-like protein yeeS | chromosome | CDS | 2365806 | 447 | + | 0.579418 |
NA | c2511 | transposase/IS protein | chromosome | CDS | 2347151 | 783 | - | 0.500639 |
NA | c3657 | Unknown in ISEc8 | chromosome | CDS | 3495431 | 393 | + | 0.531807 |
NA | c1893 | hypothetical protein | chromosome | CDS | 1727294 | 144 | + | 0.354167 |
NA | c3663 | hypothetical protein | chromosome | CDS | 3500024 | 381 | + | 0.530184 |
NA | c0396 | Insertion element IS1 1/2/3/5/6 protein insA | chromosome | CDS | 376600 | 216 | + | 0.472222 |
NA | c5213 | Putative Transposase for IS629 | chromosome | CDS | 4966657 | 891 | - | 0.539843 |
NA | c4010 | hypothetical protein | chromosome | CDS | 3827694 | 165 | + | 0.406061 |
NA | c5144 | hypothetical protein | chromosome | CDS | 4920004 | 1500 | + | 0.539333 |
NA | c4222 | Putative DNA processing protein | chromosome | CDS | 4011694 | 1296 | - | 0.506173 |
NA | c0357 | hypothetical protein | chromosome | CDS | 334492 | 384 | + | 0.479167 |
NA | c3608 | hypothetical protein | chromosome | CDS | 3447354 | 756 | + | 0.537037 |
NA | c3658 | hypothetical protein | chromosome | CDS | 3495830 | 1602 | + | 0.548065 |
NA | c5215 | hypothetical protein | chromosome | CDS | 4967922 | 1764 | - | 0.477891 |
NA | c2392 | Putative P4-family integrase | chromosome | CDS | 2194512 | 1221 | + | 0.487305 |
NA | c4223 | hypothetical protein | chromosome | CDS | 4012896 | 2100 | - | 0.493333 |
NA | c3645 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3482090 | 1539 | + | 0.595192 |
NA | c3560 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3410473 | 405 | + | 0.493827 |
NA | c5177 | Hypothetical protein in IS | chromosome | CDS | 4939432 | 327 | + | 0.53211 |
NA | c1497 | Putative single stranded DNA-binding protein of prophage | chromosome | CDS | 1384538 | 411 | + | 0.574209 |
NA | c3615 | Unknown in ISEc8 | chromosome | CDS | 3453103 | 1482 | - | 0.549933 |
NA | c1519 | Prophage lambda integrase | chromosome | CDS | 1397370 | 1143 | - | 0.433946 |
NA | c3562 | hypothetical protein | chromosome | CDS | 3411270 | 408 | + | 0.588235 |
NA | c1224 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 1174628 | 753 | - | 0.568393 |
NA | c0002 | hypothetical protein | chromosome | CDS | 534 | 378 | + | 0.460317 |
NA | c5166 | Partial Transposase | chromosome | CDS | 4931923 | 219 | - | 0.511416 |
NA | c5378 | hypothetical protein | chromosome | CDS | 5123325 | 3279 | - | 0.522415 |
NA | c1738 | hypothetical protein | chromosome | CDS | 1574161 | 459 | + | 0.459695 |
NA | c0118 | hypothetical protein | chromosome | CDS | 115372 | 522 | + | 0.463602 |
NA | c2425 | hypothetical protein | chromosome | CDS | 2231467 | 378 | - | 0.460317 |
NA | c1282 | Putative radC-like protein yeeS | chromosome | CDS | 1233881 | 477 | + | 0.580713 |
NA | c2639 | Transposase | chromosome | CDS | 2483231 | 510 | - | 0.460784 |
NA | c2897 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 2756729 | 630 | - | 0.349206 |
NA | c5176 | Putative Transposase within prophage | chromosome | CDS | 4938378 | 783 | - | 0.510856 |
NA | c5384 | hypothetical protein | chromosome | CDS | 5129587 | 393 | - | 0.445293 |
NA | c2474 | Transposase | chromosome | CDS | 2316245 | 228 | + | 0.45614 |
NA | c1165 | Putative P4-family integrase | chromosome | CDS | 1127702 | 1203 | + | 0.487116 |
NA | c3643 | Unknown in ISEc8 | chromosome | CDS | 3480993 | 1101 | + | 0.552225 |
NA | c3577 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3427169 | 402 | + | 0.517413 |
NA | c0086 | Transposase | chromosome | CDS | 82026 | 510 | + | 0.462745 |
NA | c1384 | hypothetical protein | chromosome | CDS | 1311803 | 510 | + | 0.462745 |
NA | c3189 | hypothetical protein | chromosome | CDS | 3055857 | 390 | - | 0.566667 |
NA | c3561 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3410874 | 348 | + | 0.568965 |
NA | c4540 | Putative maturase-related protein | chromosome | CDS | 4320543 | 540 | + | 0.585185 |
NA | c3575 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 3425931 | 819 | - | 0.507937 |
NA | c0232 | Putative Transposase insK for insertion sequence element IS150 | chromosome | CDS | 226161 | 723 | - | 0.489627 |
ada | c2754 | ADA Regulatory protein | chromosome | CDS | 2596284 | 1065 | - | 0.569014 |
alkA | c2595 | DNA-3-methyladenine glycosylase II | chromosome | CDS | 2434020 | 849 | - | 0.547703 |
alkB | c2753 | Alkylated DNA repair protein alkB | chromosome | CDS | 2595634 | 651 | - | 0.53149 |
dam | c4157 | DNA adenine methylase | chromosome | CDS | 3941130 | 837 | - | 0.491039 |
dbpA | c1817 | ATP-independent RNA helicase dbpA | chromosome | CDS | 1648163 | 1374 | + | 0.517467 |
dcm | c2380 | DNA-cytosine methyltransferase | chromosome | CDS | 2182668 | 1419 | - | 0.51797 |
deaD | c3916 | Cold-shock DEAD-box protein A | chromosome | CDS | 3739604 | 1956 | - | 0.551125 |
dinG | c0883 | Probable ATP-dependent helicase dinG | chromosome | CDS | 855392 | 2151 | + | 0.543933 |
dinP | c0379 | DNA polymerase IV | chromosome | CDS | 358886 | 1056 | + | 0.535985 |
dnaB | c5026 | replicative DNA helicase | chromosome | CDS | 4802013 | 1452 | + | 0.527548 |
dnaC | c5440 | DNA replication protein DnaC | chromosome | CDS | 5189225 | 738 | - | 0.50271 |
dnaE | c0221 | DNA polymerase III subunit alpha | chromosome | CDS | 215161 | 3483 | + | 0.549239 |
dnaG | c3817 | DNA primase | chromosome | CDS | 3651701 | 1746 | + | 0.523482 |
dnaN | c4623 | DNA polymerase III subunit beta | chromosome | CDS | 4382957 | 1101 | - | 0.5495 |
dnaQ | c0252 | DNA polymerase III subunit epsilon | chromosome | CDS | 247681 | 741 | + | 0.507422 |
dnaX | c0589 | DNA polymerase III subunits gamma and tau | chromosome | CDS | 566742 | 1932 | + | 0.569876 |
endA | c3531 | Endonuclease I precursor | chromosome | CDS | 3386299 | 711 | + | 0.534459 |
fimB | c5391 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 5135689 | 603 | + | 0.427861 |
fimE | c5392 | Type 1 fimbriae Regulatory protein fimE | chromosome | CDS | 5136769 | 597 | + | 0.472362 |
fis | c4027 | DNA-binding protein Fis | chromosome | CDS | 3843039 | 297 | + | 0.468013 |
gipA | c0851 | Peyer's patch-specific virulence factor GipA | chromosome | CDS | 829502 | 1131 | + | 0.5084 |
gyrA | c2773 | DNA gyrase subunit A | chromosome | CDS | 2623646 | 2628 | - | 0.539954 |
gyrB | c4621 | DNA gyrase subunit B | chromosome | CDS | 4379441 | 2418 | - | 0.547974 |
helD | c1099 | Helicase IV | chromosome | CDS | 1068166 | 2148 | + | 0.522346 |
hepA | c0070 | ATP-dependent helicase HepA | chromosome | CDS | 62160 | 2907 | - | 0.55074 |
himA | c2109 | integration host factor alpha subunit | chromosome | CDS | 1951220 | 300 | - | 0.5 |
himD | c1050 | integration host factor beta subunit | chromosome | CDS | 1014789 | 285 | + | 0.491228 |
holA | c0731 | DNA polymerase III subunit delta | chromosome | CDS | 710565 | 1032 | - | 0.526163 |
holB | c1371 | DNA polymerase III subunit delta | chromosome | CDS | 1299263 | 1005 | + | 0.540299 |
holC | c5359 | DNA polymerase III subunit chi | chromosome | CDS | 5102673 | 444 | - | 0.533784 |
holD | c5452 | DNA polymerase III subunit psi | chromosome | CDS | 5196724 | 414 | + | 0.584541 |
hrpA | c1840 | ATP-dependent helicase hrpA | chromosome | CDS | 1677178 | 3903 | + | 0.537279 |
hrpB | c0181 | ATP-dependent helicase hrpB | chromosome | CDS | 172609 | 2475 | + | 0.564444 |
hupA | c4957 | DNA-binding protein HU-alpha | chromosome | CDS | 4731488 | 273 | + | 0.483516 |
hupB | c0556 | DNA-binding protein HU-beta | chromosome | CDS | 535378 | 273 | + | 0.490842 |
insB | c4504 | Insertion element IS1 1/5/6 protein insB | chromosome | CDS | 4290267 | 360 | + | 0.527778 |
insI | c4506 | Transposase insI for insertion sequence element IS30B/C/D | chromosome | CDS | 4291966 | 1152 | - | 0.458333 |
intC | c4491 | Putative prophage integrase | chromosome | CDS | 4274702 | 1185 | + | 0.454008 |
intT | c0932 | Integrase for prophage | chromosome | CDS | 909332 | 1032 | - | 0.472868 |
lig | c2945 | DNA ligase | chromosome | CDS | 2809040 | 2016 | - | 0.543651 |
mfd | c1389 | Transcription-repair coupling factor | chromosome | CDS | 1315400 | 2856 | - | 0.545518 |
mutH | c3426 | DNA mismatch repair protein | chromosome | CDS | 3276983 | 690 | + | 0.536232 |
mutL | c5254 | DNA mismatch repair protein | chromosome | CDS | 5005569 | 1851 | + | 0.559157 |
mutM | c4459 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 4241341 | 810 | - | 0.541975 |
mutS | c3294 | DNA mismatch repair protein | chromosome | CDS | 3138250 | 2562 | + | 0.555035 |
mutT | c0117 | Mutator mutT protein | chromosome | CDS | 114871 | 399 | + | 0.493734 |
mutY | c3548 | A/G-specific adenine glycosylase | chromosome | CDS | 3398842 | 1083 | + | 0.554017 |
nei | c0793 | Endonuclease VIII | chromosome | CDS | 777002 | 792 | + | 0.526515 |
nfi | c4955 | Endonuclease V | chromosome | CDS | 4729997 | 672 | + | 0.589286 |
nfo | c2694 | endonuclease IV | chromosome | CDS | 2542533 | 858 | + | 0.522144 |
nohA | c1568 | Prophage Qin DNA packaging protein NU1 homolog | chromosome | CDS | 1424932 | 549 | + | 0.499089 |
nohB | c3174 | Prophage QSR' DNA packaging protein NU1 homolog | chromosome | CDS | 3045954 | 546 | - | 0.514652 |
nth | c2025 | Endonuclease III | chromosome | CDS | 1872052 | 636 | + | 0.481132 |
ntpA | c2279 | dATP pyrophosphohydrolase | chromosome | CDS | 2099858 | 444 | - | 0.527027 |
nudC | c4953 | NADH pyrophosphatase | chromosome | CDS | 4728110 | 774 | + | 0.529716 |
ogt | c1808 | Methylated-DNA--protein-cysteinemethyltransferase | chromosome | CDS | 1641808 | 516 | - | 0.52907 |
parC | c3760 | DNA topoisomerase IV subunit A | chromosome | CDS | 3593045 | 2259 | - | 0.54803 |
parE | c3776 | DNA topoisomerase IV subunit B | chromosome | CDS | 3610295 | 1893 | - | 0.536186 |
phrB | c0787 | Deoxyribodipyrimidine photolyase | chromosome | CDS | 770682 | 1419 | + | 0.538407 |
polB | c0071 | DNA polymerase II | chromosome | CDS | 65231 | 2352 | - | 0.554422 |
priA | c4888 | primosome assembly protein PriA | chromosome | CDS | 4644306 | 2271 | - | 0.566711 |
priC | c0586 | Primosomal replication protein N | chromosome | CDS | 564935 | 528 | - | 0.590909 |
radC | c4462 | DNA repair protein RadC | chromosome | CDS | 4242889 | 675 | - | 0.485926 |
rdgC | c0502 | recombination associated protein | chromosome | CDS | 483153 | 984 | - | 0.514228 |
recA | c3253 | recombinase A | chromosome | CDS | 3105176 | 1062 | - | 0.538606 |
recB | c3414 | Exodeoxyribonuclease V beta chain | chromosome | CDS | 3259781 | 3552 | - | 0.540541 |
recC | c3416 | Exodeoxyribonuclease V gamma chain | chromosome | CDS | 3266380 | 3369 | - | 0.533096 |
recD | c3413 | Exodeoxyribonuclease V alpha chain | chromosome | CDS | 3257955 | 1827 | - | 0.551177 |
recF | c4622 | recombination protein F | chromosome | CDS | 4381884 | 1074 | - | 0.549348 |
recG | c4477 | ATP-dependent DNA helicase recG | chromosome | CDS | 4256179 | 2115 | + | 0.569267 |
recJ | c3472 | Single-stranded-DNA-specific exonuclease recJ | chromosome | CDS | 3333346 | 1734 | - | 0.563437 |
recN | c3138 | DNA repair protein recN | chromosome | CDS | 3014381 | 1662 | + | 0.519856 |
recO | c3089 | DNA repair protein RecO | chromosome | CDS | 2964608 | 729 | - | 0.540466 |
recQ | c4744 | ATP-dependent DNA helicase recQ | chromosome | CDS | 4510278 | 1836 | + | 0.543573 |
recR | c0592 | recombination protein RecR | chromosome | CDS | 569055 | 606 | + | 0.569307 |
rep | c4698 | ATP-dependent DNA helicase rep | chromosome | CDS | 4460841 | 2022 | + | 0.543027 |
rfaP | c4454 | Lipopolysaccharide core biosynthesis protein rfaP | chromosome | CDS | 4236156 | 807 | - | 0.478315 |
rhlB | c4700 | ATP-dependent RNA helicase | chromosome | CDS | 4464529 | 1266 | - | 0.522117 |
rhlE | c0880 | Putative ATP-dependent RNA helicase rhlE | chromosome | CDS | 853494 | 1362 | + | 0.563142 |
rnhA | c0251 | ribonuclease H | chromosome | CDS | 247158 | 579 | - | 0.48532 |
rnhB | c0220 | ribonuclease HII | chromosome | CDS | 214528 | 597 | + | 0.562814 |
rnt | c2045 | ribonuclease T | chromosome | CDS | 1888876 | 648 | + | 0.54321 |
rus | c1557 | Crossover junction endodeoxyribonuclease rusA | chromosome | CDS | 1418850 | 363 | + | 0.53168 |
ruvA | c2275 | Holliday junction DNA helicase motor protein | chromosome | CDS | 2097042 | 612 | - | 0.534314 |
ruvB | c2274 | Holliday junction DNA helicase RuvB | chromosome | CDS | 2096023 | 1011 | - | 0.524233 |
ruvC | c2277 | Holliday junction resolvase | chromosome | CDS | 2098533 | 525 | - | 0.55619 |
sbcB | c2539 | Exodeoxyribonuclease I | chromosome | CDS | 2372212 | 1476 | + | 0.501355 |
sbcC | c0505 | Exonuclease sbcC | chromosome | CDS | 486676 | 3144 | - | 0.538168 |
sbcD | c0506 | Nuclease sbcCD subunit D | chromosome | CDS | 489816 | 1203 | - | 0.528678 |
sbmC | c2537 | DNA gyrase inhibitory protein | chromosome | CDS | 2370293 | 474 | - | 0.474684 |
seqA | c0774 | SeqA protein | chromosome | CDS | 755248 | 681 | + | 0.490455 |
smf | c4046 | Unknown protein fragment 1 | chromosome | CDS | 3863803 | 1125 | - | 0.506667 |
srmB | c3100 | ATP-dependent RNA helicase srmB | chromosome | CDS | 2975763 | 1335 | + | 0.546816 |
ssb | c5049 | single-strand DNA-binding protein | chromosome | CDS | 4826685 | 537 | + | 0.581006 |
tag | c4367 | DNA-3-methyladenine glycosylase I | chromosome | CDS | 4151964 | 729 | + | 0.477366 |
topA | c1741 | DNA topoisomerase I | chromosome | CDS | 1575317 | 2640 | + | 0.516667 |
topB | c2166 | DNA topoisomerase III | chromosome | CDS | 2002243 | 2004 | - | 0.542415 |
umuC | c1632 | DNA polymerase IV | chromosome | CDS | 1468502 | 1269 | + | 0.509062 |
ung | c3105 | uracil-DNA glycosylase | chromosome | CDS | 2979445 | 690 | + | 0.517391 |
uvrA | c5048 | excinuclease ABC subunit A | chromosome | CDS | 4823608 | 2823 | - | 0.555438 |
uvrB | c0860 | excinuclease ABC subunit B | chromosome | CDS | 836301 | 2022 | + | 0.530663 |
uvrC | c2326 | excinuclease ABC subunit C | chromosome | CDS | 2141550 | 1833 | - | 0.516094 |
uvrD | c4734 | DNA helicase II | chromosome | CDS | 4500688 | 2217 | + | 0.572395 |
vsr | c2379 | Very short patch repair protein | chromosome | CDS | 2182217 | 471 | - | 0.564756 |
wcaH | c2577 | GDP-mannose mannosyl hydrolase | chromosome | CDS | 2413279 | 483 | - | 0.550725 |
xerC | c4732 | tyrosine recombinase | chromosome | CDS | 4499046 | 897 | + | 0.540691 |
xerD | c3474 | tyrosine recombinase | chromosome | CDS | 3335820 | 897 | - | 0.532887 |
xni | c3366 | exonuclease IX | chromosome | CDS | 3205782 | 846 | + | 0.523641 |
xseA | c3028 | exodeoxyribonuclease VII large subunit | chromosome | CDS | 2891197 | 1377 | + | 0.535948 |
xseB | c0533 | exodeoxyribonuclease VII small subunit | chromosome | CDS | 515029 | 243 | - | 0.54321 |
xthA | c2150 | Exodeoxyribonuclease III | chromosome | CDS | 1986261 | 819 | + | 0.534799 |
ybaV | c0558 | Hypothetical protein ybaV precursor | chromosome | CDS | 537864 | 372 | + | 0.540323 |
ybaZ | c0573 | Hypothetical protein ybaZ | chromosome | CDS | 550632 | 411 | - | 0.547445 |
ybjD | c1011 | Hypothetical protein ybjD | chromosome | CDS | 970601 | 1659 | + | 0.532248 |
ycaJ | c1029 | Hypothetical protein ycaJ | chromosome | CDS | 992176 | 1344 | + | 0.535714 |
ycfH | c1372 | Putative deoxyribonuclease ycfH | chromosome | CDS | 1300218 | 858 | + | 0.512821 |
ydcM | c3804 | Hypothetical protein ydcM | chromosome | CDS | 3640353 | 1206 | + | 0.505804 |
ydfP | c3179 | Hypothetical protein ydfP precursor | chromosome | CDS | 3049260 | 498 | - | 0.463855 |
ydjQ | c2140 | Hypothetical protein ydjQ | chromosome | CDS | 1977360 | 888 | + | 0.504505 |
yeaB | c2218 | Hypothetical protein yeaB | chromosome | CDS | 2047842 | 579 | + | 0.549223 |
yejH | c2721 | Hypothetical protein yejH | chromosome | CDS | 2571169 | 1761 | + | 0.533788 |
yfaO | c2793 | Putative Nudix hydrolase yfaO | chromosome | CDS | 2650936 | 426 | + | 0.474178 |
yfcD | c2842 | Hypothetical protein yfcD | chromosome | CDS | 2701137 | 543 | - | 0.53407 |
yffH | c2994 | Hypothetical protein yffH | chromosome | CDS | 2853669 | 603 | - | 0.487562 |
yfgE | c3013 | DNA replication initiation factor | chromosome | CDS | 2875039 | 747 | - | 0.534137 |
ygdP | c3425 | dinucleoside polyphosphate hydrolase | chromosome | CDS | 3275768 | 531 | - | 0.491525 |
ygiV | c3762 | Hypothetical protein ygiV | chromosome | CDS | 3597157 | 483 | - | 0.530021 |
ygjF | c3822 | G/U mismatch-specific DNA glycosylase | chromosome | CDS | 3655562 | 507 | - | 0.536489 |
yhbQ | c3908 | hypothetical protein | chromosome | CDS | 3733598 | 303 | + | 0.541254 |
yhdJ | c4028 | Hypothetical adenine-specific methylase yhdJ | chromosome | CDS | 3843415 | 891 | + | 0.481481 |
yhhF | c4258 | Putative methylase yhhF | chromosome | CDS | 4042889 | 597 | + | 0.541039 |
yicF | c4471 | DNA ligase | chromosome | CDS | 4250490 | 1689 | - | 0.523979 |
yigW | c4788 | hypothetical protein | chromosome | CDS | 4549394 | 795 | + | 0.545912 |
yjjV | c5461 | Putative deoxyribonuclease yjjV | chromosome | CDS | 5202402 | 780 | + | 0.544872 |
yqgF | c3535 | Holliday junction resolvase-like protein | chromosome | CDS | 3389455 | 417 | + | 0.53717 |
yqiE | c3780 | ADP-ribose pyrophosphatase | chromosome | CDS | 3614072 | 630 | - | 0.507937 |
yraN | c3901 | hypothetical protein | chromosome | CDS | 3729632 | 396 | + | 0.54798 |
yrdD | c4044 | Hypothetical protein yrdD | chromosome | CDS | 3862787 | 543 | - | 0.497238 |
yrfE | c4167 | ADP compounds hydrolase nudE | chromosome | CDS | 3951642 | 561 | - | 0.508021 |