Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Escherichia coli K12, K-12
Number of genes found: 237
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli K12, K-12 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
ada | b2213 | fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | chromosome | CDS | 2307363 | 1065 | - | 0.569014 |
alkA | b2068 | 3-methyl-adenine DNA glycosylase II | chromosome | CDS | 2144716 | 849 | - | 0.555948 |
alkB | b2212 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions | chromosome | CDS | 2306713 | 651 | - | 0.526882 |
dam | b3387 | DNA adenine methylase | chromosome | CDS | 3513099 | 837 | - | 0.495818 |
dbpA | b1343 | ATP-dependent RNA helicase, specific for 23S rRNA | chromosome | CDS | 1407535 | 1374 | + | 0.519651 |
dcm | b1961 | DNA cytosine methylase | chromosome | CDS | 2028923 | 1419 | - | 0.521494 |
deaD | b3162 | ATP-dependent RNA helicase | chromosome | CDS | 3303993 | 1890 | - | 0.555556 |
dinB | b0231 | DNA polymerase IV | chromosome | CDS | 250898 | 1056 | + | 0.541667 |
dinG | b0799 | ATP-dependent DNA helicase | chromosome | CDS | 832293 | 2151 | + | 0.540679 |
dinJ | b0226 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system | chromosome | CDS | 246242 | 261 | - | 0.467433 |
dnaA | b3702 | chromosomal replication initiation protein | chromosome | CDS | 3880349 | 1404 | - | 0.540598 |
dnaB | b4052 | replicative DNA helicase | chromosome | CDS | 4262337 | 1416 | + | 0.538136 |
dnaC | b4361 | DNA biosynthesis protein | chromosome | CDS | 4598261 | 738 | - | 0.50542 |
dnaE | b0184 | DNA polymerase III subunit alpha | chromosome | CDS | 205126 | 3483 | + | 0.549526 |
dnaG | b3066 | DNA primase | chromosome | CDS | 3209129 | 1746 | + | 0.52291 |
dnaN | b3701 | DNA polymerase III subunit beta | chromosome | CDS | 3879244 | 1101 | - | 0.542234 |
dnaQ | b0215 | DNA polymerase III subunit epsilon | chromosome | CDS | 236067 | 732 | + | 0.501366 |
dnaX | b0470 | DNA polymerase III subunits gamma and tau | chromosome | CDS | 491316 | 1932 | + | 0.576605 |
endA | b2945 | DNA-specific endonuclease I | chromosome | CDS | 3088369 | 708 | + | 0.548023 |
exo | b2798 | exonuclease IX | chromosome | CDS | 2928987 | 846 | + | 0.527187 |
exoX | b1844 | exodeoxyribonuclease X | chromosome | CDS | 1924144 | 663 | + | 0.518854 |
fimB | b4312 | tyrosine recombinase/inversion of on/off regulator of fimA | chromosome | CDS | 4538980 | 603 | + | 0.434494 |
fimE | b4313 | tyrosine recombinase/inversion of on/off regulator of fimA | chromosome | CDS | 4540060 | 597 | + | 0.469012 |
fis | b3261 | DNA-binding protein Fis | chromosome | CDS | 3409293 | 297 | + | 0.47138 |
gyrA | b2231 | DNA gyrase subunit A | chromosome | CDS | 2334815 | 2628 | - | 0.539954 |
gyrB | b3699 | DNA gyrase subunit B | chromosome | CDS | 3875728 | 2415 | - | 0.549896 |
hda | b2496 | DNA replication initiation factor | chromosome | CDS | 2616097 | 747 | - | 0.531459 |
helD | b0962 | DNA helicase IV | chromosome | CDS | 1023694 | 2055 | + | 0.530414 |
hepA | b0059 | ATP-dependent helicase HepA | chromosome | CDS | 60358 | 2907 | - | 0.54902 |
holA | b0640 | DNA polymerase III subunit delta | chromosome | CDS | 669797 | 1032 | - | 0.523256 |
holB | b1099 | DNA polymerase III subunit delta' | chromosome | CDS | 1154985 | 1005 | + | 0.540299 |
holC | b4259 | DNA polymerase III subunit chi | chromosome | CDS | 4481860 | 444 | - | 0.540541 |
holD | b4372 | DNA polymerase III subunit psi | chromosome | CDS | 4605826 | 414 | + | 0.577295 |
hrpA | b1413 | ATP-dependent helicase | chromosome | CDS | 1481142 | 3846 | + | 0.535101 |
hrpB | b0148 | predicted ATP-dependent helicase | chromosome | CDS | 162105 | 2430 | + | 0.565844 |
hupA | b4000 | HU, DNA-binding transcriptional regulator, alpha subunit | chromosome | CDS | 4198304 | 273 | + | 0.483516 |
hupB | b0440 | HU, DNA-binding transcriptional regulator, beta subunit | chromosome | CDS | 460675 | 273 | + | 0.490842 |
ihfA | b1712 | integration host factor subunit alpha | chromosome | CDS | 1793277 | 300 | - | 0.5 |
ihfB | b0912 | integration host factor subunit beta | chromosome | CDS | 963051 | 285 | + | 0.491228 |
insA-1 | b0022 | IS1 repressor protein InsA | chromosome | CDS | 20233 | 276 | - | 0.528986 |
insA-2 | b0265 | CP4-6 prophage; IS1 repressor protein InsA | chromosome | CDS | 278824 | 276 | - | 0.532609 |
insA-3 | b0275 | CP4-6 prophage; IS1 repressor protein InsA | chromosome | CDS | 290295 | 276 | - | 0.532609 |
insA-4 | b4516 | IS1 repressor protein InsA | chromosome | CDS | 1049056 | 276 | + | 0.528986 |
insA-5 | b1894 | IS1 repressor protein InsA | chromosome | CDS | 1976964 | 276 | - | 0.528986 |
insA-6 | b3444 | IS1 repressor protein InsA | chromosome | CDS | 3581506 | 276 | + | 0.528986 |
insA-7 | b4294 | KpLE2 phage-like element; IS1 repressor protein InsA | chromosome | CDS | 4516550 | 276 | + | 0.528986 |
insB-1 | b0021 | IS1 transposase InsAB' | chromosome | CDS | 19811 | 504 | - | 0.545635 |
insB-2 | b0264 | CP4-6 prophage; IS1 transposase InsAB' | chromosome | CDS | 278402 | 504 | - | 0.551587 |
insB-3 | b0274 | CP4-6 prophage; IS1 transposase InsAB' | chromosome | CDS | 289873 | 504 | - | 0.551587 |
insB-4 | b0988 | IS1 transposase InsAB' | chromosome | CDS | 1049250 | 504 | + | 0.547619 |
insB-5 | b1893 | IS1 transposase InsAB' | chromosome | CDS | 1976542 | 504 | - | 0.545635 |
insB-6 | b3445 | IS1 transposase InsAB' | chromosome | CDS | 3581700 | 504 | + | 0.545635 |
insC-1 | b0360 | IS2 insertion element repressor InsA | chromosome | CDS | 380530 | 411 | + | 0.508516 |
insC-2 | b1403 | IS2 insertion element repressor InsA | chromosome | CDS | 1466808 | 411 | - | 0.508516 |
insC-3 | b1997 | CP4-44 prophage; IS2 insertion element repressor InsA | chromosome | CDS | 2067839 | 411 | - | 0.508516 |
insC-4 | b2861 | IS2 insertion element repressor InsA | chromosome | CDS | 2995257 | 411 | - | 0.508516 |
insC-5 | b3044 | IS2 insertion element repressor InsA | chromosome | CDS | 3184164 | 411 | + | 0.508516 |
insC-6 | b4272 | KpLE2 phage-like element; IS2 insertion element repressor InsA | chromosome | CDS | 4496250 | 411 | + | 0.508516 |
insD-1 | b0361 | IS2 insertion element transposase InsAB' | chromosome | CDS | 380898 | 906 | + | 0.550773 |
insD-2 | b1402 | IS2 insertion element transposase InsAB' | chromosome | CDS | 1465945 | 906 | - | 0.550773 |
insD-3 | b1996 | CP4-44 prophage; IS2 insertion element transposase InsAB' | chromosome | CDS | 2066976 | 906 | - | 0.550773 |
insD-4 | b2860 | IS2 insertion element transposase InsAB' | chromosome | CDS | 2994394 | 906 | - | 0.550773 |
insD-5 | b3045 | IS2 insertion element transposase InsAB' | chromosome | CDS | 3184532 | 906 | + | 0.550773 |
insD-6 | b4273 | KpLE2 phage-like element; IS2 insertion element transposase InsAB' | chromosome | CDS | 4496618 | 906 | + | 0.550773 |
insD-7 | b1578 | Qin prophage; IS2 insertion element transposase InsAB', C-ter fragment (pseudogene) | chromosome | CDS | 1648905 | 657 | + | 0.543379 |
insE-1 | b0298 | IS3 element protein InsE | chromosome | CDS | 314506 | 309 | + | 0.501618 |
insE-2 | b0373 | IS3 element protein InsE | chromosome | CDS | 391826 | 309 | - | 0.501618 |
insE-3 | b0540 | DLP12 prophage; IS3 element protein InsE | chromosome | CDS | 566056 | 309 | + | 0.501618 |
insE-4 | b1027 | IS3 element protein InsE | chromosome | CDS | 1094361 | 309 | - | 0.501618 |
insE-5 | b2088 | IS3 element protein InsE | chromosome | CDS | 2168251 | 309 | + | 0.501618 |
insF-1 | b0299 | IS3 element protein InsF | chromosome | CDS | 314811 | 867 | + | 0.551326 |
insF-2 | b0372 | IS3 element protein InsF | chromosome | CDS | 390963 | 867 | - | 0.551326 |
insF-3 | b0541 | DLP12 prophage; IS3 element protein InsF | chromosome | CDS | 566361 | 867 | + | 0.551326 |
insF-4 | b1026 | IS3 element protein InsF | chromosome | CDS | 1093498 | 867 | - | 0.551326 |
insF-5 | b2089 | IS3 element protein InsF | chromosome | CDS | 2168556 | 867 | + | 0.551326 |
insG | b4278 | KpLE2 phage-like element; IS4 predicted transposase | chromosome | CDS | 4500126 | 1329 | - | 0.541761 |
insH-1 | b0259 | CP4-6 prophage; IS5 transposase and trans-activator | chromosome | CDS | 273325 | 1017 | - | 0.546706 |
insH-10 | b3218 | IS5 transposase and trans-activator | chromosome | CDS | 3363724 | 1017 | - | 0.546706 |
insH-11 | b3505 | IS5 transposase and trans-activator | chromosome | CDS | 3650205 | 1017 | - | 0.546706 |
insH-2 | b0552 | DLP12 prophage; IS5 transposase and trans-activator | chromosome | CDS | 573960 | 1017 | - | 0.546706 |
insH-3 | b0656 | IS5 transposase and trans-activator | chromosome | CDS | 687220 | 1017 | - | 0.546706 |
insH-4 | b1331 | IS5 transposase and trans-activator | chromosome | CDS | 1394100 | 1017 | + | 0.546706 |
insH-5 | b1370 | Rac prophage; IS5 transposase and trans-activator | chromosome | CDS | 1425770 | 981 | - | 0.554536 |
insH-6 | b1994 | CP4-44 prophage; IS5 transposase and trans-activator | chromosome | CDS | 2064329 | 1017 | - | 0.546706 |
insH-7 | b2030 | IS5 transposase and trans-activator | chromosome | CDS | 2099919 | 1017 | - | 0.546706 |
insH-8 | b2192 | IS5 transposase and trans-activator | chromosome | CDS | 2287087 | 1017 | - | 0.546706 |
insH-9 | b2982 | IS5 transposase and trans-activator | chromosome | CDS | 3128200 | 1017 | + | 0.546706 |
insI-1 | b0256 | CP4-6 prophage; IS30 transposase | chromosome | CDS | 269827 | 1152 | + | 0.458333 |
insI-2 | b1404 | IS30 transposase | chromosome | CDS | 1467382 | 1152 | + | 0.458333 |
insI-3 | b4284 | KpLE2 phage-like element; IS30 transposase | chromosome | CDS | 4505489 | 1152 | - | 0.458333 |
insJ | b3557 | IS150 protein InsA | chromosome | CDS | 3718703 | 522 | + | 0.461686 |
insK | b3558 | IS150 conserved protein InsB | chromosome | CDS | 3719221 | 852 | + | 0.428404 |
insL-1 | b0016 | IS186/IS421 transposase | chromosome | CDS | 15445 | 1113 | + | 0.519317 |
insL-2 | b0582 | IS186/IS421 transposase | chromosome | CDS | 607288 | 1113 | + | 0.519317 |
insL-3 | b2394 | IS186/IS421 transposase | chromosome | CDS | 2512353 | 1113 | + | 0.519317 |
insM | b4561 | transposase | chromosome | CDS | 4506597 | 369 | - | 0.444444 |
insN-1 | b0255 | CP4-6 prophage; partial regulator of insertion element IS911A | chromosome | CDS | 269466 | 405 | + | 0.437037 |
insN-2 | b4283 | KpLE2 phage-like element; partial regulator of insertion element IS911B | chromosome | CDS | 4505220 | 267 | + | 0.430712 |
insO-1 | b0257 | CP4-6 prophage; partial transposase of insertion element IS911A | chromosome | CDS | 271054 | 426 | + | 0.556338 |
insO-2 | b4285 | KpLE2 phage-like element; partial transposase of insertion element IS911B | chromosome | CDS | 4506981 | 597 | + | 0.552764 |
intA | b2622 | CP4-57 prophage; integrase | chromosome | CDS | 2754181 | 1242 | + | 0.475845 |
intB | b4271 | KpLE2 phage-like element; predicted integrase | chromosome | CDS | 4494773 | 1191 | + | 0.457599 |
intD | b0537 | DLP12 prophage; predicted integrase | chromosome | CDS | 564038 | 1164 | - | 0.469072 |
intE | b1140 | e14 prophage; predicted integrase | chromosome | CDS | 1198902 | 1128 | - | 0.447695 |
intF | b0281 | CP4-6 prophage; predicted phage integrase | chromosome | CDS | 294920 | 1401 | - | 0.443255 |
intG | b1936 | predicted defective phage integrase (pseudogene) | chromosome | CDS | 2010526 | 279 | + | 0.480287 |
intQ | b1579 | Qin prophage; predicted defective integrase | chromosome | CDS | 1649536 | 1197 | + | 0.421888 |
intR | b1345 | Rac prophage; integrase | chromosome | CDS | 1410024 | 1236 | - | 0.429612 |
intS | b2349 | CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase | chromosome | CDS | 2464567 | 1158 | + | 0.477547 |
intZ | b2442 | CPZ-55 prophage; predicted integrase | chromosome | CDS | 2556793 | 1296 | + | 0.534722 |
ligA | b2411 | NAD-dependent DNA ligase LigA | chromosome | CDS | 2526183 | 2016 | - | 0.544147 |
ligB | b3647 | NAD-dependent DNA ligase LigB | chromosome | CDS | 3817511 | 1683 | - | 0.525847 |
mcrB | b4346 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB | chromosome | CDS | 4575981 | 1380 | - | 0.403623 |
mfd | b1114 | transcription-repair coupling factor | chromosome | CDS | 1169741 | 3447 | - | 0.547723 |
mutH | b2831 | DNA mismatch repair protein | chromosome | CDS | 2967684 | 690 | + | 0.536232 |
mutL | b4170 | DNA mismatch repair protein | chromosome | CDS | 4395435 | 1848 | + | 0.562771 |
mutM | b3635 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 3808366 | 810 | - | 0.538272 |
mutS | b2733 | DNA mismatch repair protein | chromosome | CDS | 2855115 | 2562 | + | 0.56128 |
mutT | b0099 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP | chromosome | CDS | 111044 | 390 | + | 0.492308 |
mutY | b2961 | adenine DNA glycosylase | chromosome | CDS | 3101035 | 1053 | + | 0.551757 |
nei | b0714 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase | chromosome | CDS | 745158 | 792 | + | 0.52399 |
nfi | b3998 | endonuclease V | chromosome | CDS | 4196813 | 672 | + | 0.587798 |
nfo | b2159 | endonuclease IV | chromosome | CDS | 2248862 | 858 | + | 0.524476 |
nohA | b1548 | Qin prophage; predicted packaging protein | chromosome | CDS | 1633822 | 570 | - | 0.536842 |
nohB | b0560 | DLP12 prophage; DNA packaging protein | chromosome | CDS | 580057 | 546 | + | 0.525641 |
nth | b1633 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) | chromosome | CDS | 1709547 | 636 | + | 0.492138 |
nudB | b1865 | dATP pyrophosphohydrolase | chromosome | CDS | 1946204 | 453 | - | 0.525386 |
nudC | b3996 | NADH pyrophosphatase | chromosome | CDS | 4194926 | 774 | + | 0.5323 |
nudD | b2051 | GDP-mannose mannosyl hydrolase | chromosome | CDS | 2123767 | 480 | - | 0.545833 |
nudE | b3397 | ADP-ribose diphosphatase | chromosome | CDS | 3523611 | 561 | - | 0.508021 |
nudF | b3034 | ADP-ribose pyrophosphatase | chromosome | CDS | 3175303 | 630 | - | 0.507937 |
nudG | b1759 | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase | chromosome | CDS | 1839514 | 408 | + | 0.54902 |
nudH | b2830 | dinucleoside polyphosphate hydrolase | chromosome | CDS | 2966469 | 531 | - | 0.493409 |
ogt | b1335 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase | chromosome | CDS | 1397745 | 516 | - | 0.531008 |
parC | b3019 | DNA topoisomerase IV subunit A | chromosome | CDS | 3161737 | 2259 | - | 0.546702 |
parE | b3030 | DNA topoisomerase IV subunit B | chromosome | CDS | 3171526 | 1893 | - | 0.535658 |
phr | b0708 | deoxyribodipyrimidine photolyase, FAD-binding | chromosome | CDS | 738730 | 1419 | + | 0.534884 |
pin | b1158 | e14 prophage; site-specific DNA recombinase | chromosome | CDS | 1208908 | 555 | + | 0.488288 |
pinQ | b1545 | Qin prophage; predicted site-specific recombinase | chromosome | CDS | 1631646 | 591 | + | 0.448393 |
pinR | b1374 | Rac prophage; predicted site-specific recombinase | chromosome | CDS | 1431108 | 591 | - | 0.446701 |
polA | b3863 | DNA polymerase I | chromosome | CDS | 4044989 | 2787 | + | 0.519555 |
polB | b0060 | DNA polymerase II | chromosome | CDS | 63429 | 2352 | - | 0.553571 |
priA | b3935 | primosome assembly protein PriA | chromosome | CDS | 4122635 | 2199 | - | 0.574807 |
priB | b4201 | primosomal replication protein N | chromosome | CDS | 4423543 | 315 | + | 0.52381 |
priC | b0467 | primosomal replication protein N'' | chromosome | CDS | 489509 | 528 | - | 0.589015 |
rdgC | b0393 | recombination associated protein | chromosome | CDS | 408332 | 912 | - | 0.515351 |
recA | b2699 | recombinase A | chromosome | CDS | 2820730 | 1062 | - | 0.541431 |
recB | b2820 | exonuclease V (RecBCD complex), beta subunit | chromosome | CDS | 2950483 | 3543 | - | 0.545583 |
recC | b2822 | exonuclease V (RecBCD complex), gamma chain | chromosome | CDS | 2957082 | 3369 | - | 0.536064 |
recD | b2819 | exonuclease V (RecBCD complex), alpha chain | chromosome | CDS | 2948657 | 1827 | - | 0.552819 |
recF | b3700 | recombination protein F | chromosome | CDS | 3878171 | 1074 | - | 0.550279 |
recG | b3652 | ATP-dependent DNA helicase | chromosome | CDS | 3823233 | 2082 | + | 0.572046 |
recJ | b2892 | ssDNA exonuclease, 5' --> 3'-specific | chromosome | CDS | 3034395 | 1734 | - | 0.566321 |
recN | b2616 | recombination and repair protein | chromosome | CDS | 2749817 | 1662 | + | 0.518051 |
recO | b2565 | DNA repair protein RecO | chromosome | CDS | 2699763 | 729 | - | 0.540466 |
recQ | b3822 | ATP-dependent DNA helicase | chromosome | CDS | 4003887 | 1830 | + | 0.551366 |
recR | b0472 | recombination protein RecR | chromosome | CDS | 493629 | 606 | + | 0.577558 |
recT | b1349 | Rac prophage; recombination and repair protein | chromosome | CDS | 1412008 | 810 | - | 0.471605 |
relB | b1564 | Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor | chromosome | CDS | 1643657 | 240 | - | 0.470833 |
rep | b3778 | DNA helicase and single-stranded DNA-dependent ATPase | chromosome | CDS | 3958700 | 2022 | + | 0.534619 |
rfaP | b3630 | kinase that phosphorylates core heptose of lipopolysaccharide | chromosome | CDS | 3803176 | 798 | - | 0.433584 |
rfaZ | b3624 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3797368 | 852 | - | 0.325117 |
rhlB | b3780 | ATP-dependent RNA helicase | chromosome | CDS | 3962388 | 1266 | - | 0.525276 |
rhlE | b0797 | RNA helicase | chromosome | CDS | 830095 | 1365 | + | 0.567033 |
rnhA | b0214 | ribonuclease H | chromosome | CDS | 235535 | 468 | - | 0.504274 |
rnhB | b0183 | ribonuclease HII | chromosome | CDS | 204493 | 597 | + | 0.572864 |
rnt | b1652 | ribonuclease T | chromosome | CDS | 1726371 | 648 | + | 0.541667 |
rusA | b0550 | DLP12 prophage; endonuclease RUS | chromosome | CDS | 572594 | 363 | + | 0.53168 |
ruvA | b1861 | Holliday junction DNA helicase motor protein | chromosome | CDS | 1943389 | 612 | - | 0.53268 |
ruvB | b1860 | Holliday junction DNA helicase B | chromosome | CDS | 1942370 | 1011 | - | 0.527201 |
ruvC | b1863 | Holliday junction resolvase | chromosome | CDS | 1944879 | 522 | - | 0.559387 |
sbcB | b2011 | exonuclease I | chromosome | CDS | 2080780 | 1428 | + | 0.5007 |
sbcC | b0397 | exonuclease, dsDNA, ATP-dependent | chromosome | CDS | 411831 | 3147 | - | 0.537973 |
sbcD | b0398 | exonuclease, dsDNA, ATP-dependent | chromosome | CDS | 414974 | 1203 | - | 0.532835 |
sbmC | b2009 | DNA gyrase inhibitor | chromosome | CDS | 2078813 | 474 | - | 0.472574 |
seqA | b0687 | regulatory protein for replication initiation | chromosome | CDS | 712210 | 546 | + | 0.496337 |
smf | b4473 | hypothetical protein | chromosome | CDS | 3430458 | 1125 | - | 0.509333 |
srmB | b2576 | ATP-dependent RNA helicase | chromosome | CDS | 2710918 | 1335 | + | 0.547566 |
ssb | b4059 | single-strand DNA-binding protein | chromosome | CDS | 4272148 | 537 | + | 0.581006 |
tag | b3549 | 3-methyl-adenine DNA glycosylase I, constitutive | chromosome | CDS | 3711115 | 564 | + | 0.498227 |
tatD | b4483 | DNase, magnesium-dependent | chromosome | CDS | 4021577 | 783 | + | 0.542784 |
topA | b1274 | DNA topoisomerase I | chromosome | CDS | 1329072 | 2598 | + | 0.517706 |
topB | b1763 | DNA topoisomerase III | chromosome | CDS | 1843023 | 1962 | - | 0.551478 |
umuC | b1184 | DNA polymerase V subunit UmuC | chromosome | CDS | 1230409 | 1269 | + | 0.50985 |
ung | b2580 | uracil-DNA glycosylase | chromosome | CDS | 2714776 | 690 | + | 0.521739 |
uvrA | b4058 | excinuclease ABC subunit A | chromosome | CDS | 4269072 | 2823 | - | 0.560751 |
uvrB | b0779 | excinuclease ABC subunit B | chromosome | CDS | 812749 | 2022 | + | 0.535608 |
uvrC | b1913 | excinuclease ABC subunit C | chromosome | CDS | 1990898 | 1833 | - | 0.517185 |
uvrD | b3813 | DNA-dependent ATPase I and helicase II | chromosome | CDS | 3996006 | 2163 | + | 0.576976 |
vsr | b1960 | DNA mismatch endonuclease of very short patch repair | chromosome | CDS | 2028472 | 471 | - | 0.56051 |
xerC | b3811 | site-specific tyrosine recombinase XerC | chromosome | CDS | 3994310 | 897 | + | 0.539576 |
xerD | b2894 | site-specific tyrosine recombinase XerD | chromosome | CDS | 3036869 | 897 | - | 0.530658 |
xseA | b2509 | exodeoxyribonuclease VII large subunit | chromosome | CDS | 2632254 | 1371 | + | 0.532458 |
xseB | b0422 | exodeoxyribonuclease VII small subunit | chromosome | CDS | 440325 | 243 | - | 0.55144 |
xthA | b1749 | exonuclease III | chromosome | CDS | 1830452 | 807 | + | 0.534077 |
yafM | b0228 | hypothetical protein | chromosome | CDS | 247637 | 498 | + | 0.447791 |
yagA | b0267 | CP4-6 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 280053 | 1155 | - | 0.620779 |
yagL | b0278 | CP4-6 prophage; DNA-binding protein | chromosome | CDS | 292444 | 699 | - | 0.373391 |
ybaV | b0442 | hypothetical protein | chromosome | CDS | 463161 | 372 | + | 0.548387 |
ybaZ | b0454 | predicted methyltransferase | chromosome | CDS | 475206 | 390 | - | 0.541026 |
ybcK | b0544 | DLP12 prophage; predicted recombinase | chromosome | CDS | 568125 | 1527 | + | 0.355599 |
ybfD | b0706 | hypothetical protein | chromosome | CDS | 737315 | 762 | + | 0.396325 |
ybjD | b0876 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 915696 | 1659 | + | 0.531043 |
ycaJ | b0892 | recombination protein | chromosome | CDS | 937217 | 1344 | + | 0.535714 |
ycfH | b1100 | predicted metallodependent hydrolase | chromosome | CDS | 1156000 | 798 | + | 0.508772 |
ydaV | b1360 | Rac prophage; predicted DNA replication protein | chromosome | CDS | 1420007 | 747 | + | 0.527443 |
ydcC | b1460 | hypothetical protein | chromosome | CDS | 1529840 | 1137 | + | 0.417766 |
ydcM | b1432 | predicted transposase | chromosome | CDS | 1501681 | 1209 | + | 0.514475 |
ydjQ | b1741 | endonuclease of nucleotide excision repair | chromosome | CDS | 1821539 | 888 | + | 0.515766 |
yeaB | b1813 | predicted NUDIX hydrolase | chromosome | CDS | 1894194 | 579 | + | 0.549223 |
yeeS | b2002 | CP4-44 prophage; predicted DNA repair protein | chromosome | CDS | 2074332 | 447 | + | 0.581656 |
yejH | b2184 | predicted ATP-dependet helicase | chromosome | CDS | 2278654 | 1761 | + | 0.531516 |
yfaO | b2251 | predicted NUDIX hydrolase | chromosome | CDS | 2362576 | 426 | + | 0.476526 |
yfcD | b2299 | predicted NUDIX hydrolase | chromosome | CDS | 2416656 | 543 | - | 0.532228 |
yffH | b2467 | predicted NUDIX hydrolase | chromosome | CDS | 2580925 | 576 | - | 0.486111 |
yfjY | b2644 | CP4-57 prophage; predicted DNA repair protein | chromosome | CDS | 2774408 | 483 | + | 0.542443 |
ygbT | b2755 | hypothetical protein | chromosome | CDS | 2876877 | 918 | - | 0.513072 |
ygiV | b3023 | predicted transcriptional regulator | chromosome | CDS | 3166771 | 483 | - | 0.532091 |
ygjF | b3068 | G/U mismatch-specific DNA glycosylase | chromosome | CDS | 3212989 | 507 | - | 0.536489 |
yhbQ | b3155 | hypothetical protein | chromosome | CDS | 3297988 | 303 | + | 0.544554 |
yhdJ | b3262 | predicted methyltransferase | chromosome | CDS | 3409675 | 885 | + | 0.474576 |
yhhF | b3465 | predicted methyltransferase | chromosome | CDS | 3602416 | 597 | + | 0.539364 |
yhhI | b3484 | predicted transposase | chromosome | CDS | 3622401 | 1137 | + | 0.415128 |
yicR | b3638 | DNA repair protein RadC | chromosome | CDS | 3809914 | 669 | - | 0.479821 |
yjbI | b4038 | hypothetical protein | chromosome | CDS | 4248978 | 1329 | + | 0.331828 |
yjhR | b4308 | KpLE2 phage-like element; predicted frameshift suppressor | chromosome | CDS | 4533038 | 1017 | + | 0.437561 |
yjjV | b4378 | predicted DNase | chromosome | CDS | 4611504 | 780 | + | 0.555128 |
ykfC | b0258 | CP4-6 prophage; conserved protein | chromosome | CDS | 272071 | 1146 | + | 0.545375 |
ykfG | b0247 | CP4-6 prophage; predicted DNA repair protein | chromosome | CDS | 263480 | 477 | - | 0.584906 |
ykgN | b4505 | predicted IS protein | chromosome | CDS | 279248 | 339 | - | 0.451327 |
ymfB | b1134 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase | chromosome | CDS | 1193050 | 462 | - | 0.502164 |
yncI | b1458 | hypothetical protein | chromosome | CDS | 1528610 | 747 | + | 0.380187 |
yncM | b1459 | hypothetical protein | chromosome | CDS | 1529400 | 201 | + | 0.40796 |
yoaA | b1808 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1889349 | 1911 | - | 0.552067 |
yqgF | b2949 | Holliday junction resolvase-like protein | chromosome | CDS | 3091522 | 417 | + | 0.529976 |
yraN | b3148 | hypothetical protein | chromosome | CDS | 3293416 | 396 | + | 0.545455 |
yrdD | b3283 | predicted DNA topoisomerase | chromosome | CDS | 3429442 | 543 | - | 0.497238 |