Gene list
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COG category: Transcription
Organism: Escherichia coli APEC O1, APEC O1
Number of genes found: 280
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli APEC O1, APEC O1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | APECO1_3764 | putative anti-terminator regulatory protein | chromosome | CDS | 3061538 | 576 | + | 0.465278 |
NA | APECO1_4028 | putative repressor protein | chromosome | CDS | 2772508 | 585 | + | 0.505983 |
NA | APECO1_2146 | putative arganine repressor | chromosome | CDS | 4887416 | 555 | - | 0.412613 |
NA | APECO1_1057 | putative AraC type regulator | chromosome | CDS | 2098613 | 960 | + | 0.565625 |
NA | APECO1_660 | hypothetical protein | chromosome | CDS | 1671563 | 687 | + | 0.502183 |
NA | APECO1_435 | hypothetical protein | chromosome | CDS | 1392716 | 975 | + | 0.487179 |
NA | APECO1_2304 | putative transcriptional repressor | chromosome | CDS | 4721090 | 372 | + | 0.424731 |
NA | APECO1_517 | putative transcriptional regulator | chromosome | CDS | 1487104 | 792 | + | 0.503788 |
NA | APECO1_503 | putative regulator | chromosome | CDS | 1474820 | 420 | - | 0.447619 |
NA | APECO1_230 | putative CI repressor of bacteriophage | chromosome | CDS | 1187670 | 696 | - | 0.462644 |
NA | APECO1_839 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1867570 | 759 | - | 0.424242 |
NA | APECO1_3183 | putative DeoR-family regulatory protein | chromosome | CDS | 3696353 | 831 | + | 0.483755 |
NA | APECO1_655 | putative transcriptional regulator | chromosome | CDS | 1663683 | 699 | + | 0.409156 |
NA | APECO1_948 | hypothetical protein | chromosome | CDS | 1992492 | 273 | + | 0.498168 |
NA | APECO1_2972 | putative regulatory protein | chromosome | CDS | 3918463 | 756 | + | 0.436508 |
NA | APECO1_1043 | putative transcriptional regulator | chromosome | CDS | 2083263 | 420 | + | 0.407143 |
NA | APECO1_4183 | putative phage repressor protein | chromosome | CDS | 2603887 | 651 | + | 0.470046 |
NA | APECO1_489 | hypothetical protein | chromosome | CDS | 1457404 | 816 | - | 0.457108 |
NA | APECO1_2576 | hypothetical protein | chromosome | CDS | 4391402 | 291 | + | 0.487972 |
NA | APECO1_2447 | putative transcriptional regulator of sorbose uptake and utilization genes | chromosome | CDS | 4554039 | 993 | - | 0.494461 |
NA | APECO1_448 | putative transcription regulatory protein | chromosome | CDS | 1410341 | 588 | + | 0.481293 |
NA | APECO1_3872 | putative phage repressor | chromosome | CDS | 2950030 | 675 | + | 0.447407 |
NA | APECO1_1782 | putative transcriptional regulator LYSR-type | chromosome | CDS | 234693 | 915 | - | 0.49071 |
NA | APECO1_235 | putative exclusion protein ren of prophage | chromosome | CDS | 1190720 | 291 | + | 0.501718 |
NA | APECO1_1076 | putative carbohydrate kinase | chromosome | CDS | 2141294 | 1215 | + | 0.413992 |
NA | APECO1_1682 | hypothetical protein | chromosome | CDS | 350360 | 795 | - | 0.489308 |
NA | APECO1_1385 | putative transcriptional regulator | chromosome | CDS | 690436 | 762 | + | 0.505249 |
NA | APECO1_1698 | putative LysR-like transcriptional regulator | chromosome | CDS | 328227 | 990 | + | 0.425253 |
NA | APECO1_1723 | hypothetical protein | chromosome | CDS | 299152 | 690 | + | 0.356522 |
NA | APECO1_2590 | putative bacterial regulatory protein | chromosome | CDS | 4378306 | 789 | - | 0.501901 |
NA | APECO1_3389 | putative phosphosugar isomerases | chromosome | CDS | 3464894 | 888 | - | 0.52027 |
NA | APECO1_3409 | putative regulator | chromosome | CDS | 3444897 | 750 | + | 0.444 |
NA | APECO1_627 | putative ARAC-type regulatory protein | chromosome | CDS | 1631462 | 762 | - | 0.393701 |
NA | APECO1_2640 | putative transcriptional regulatory protein | chromosome | CDS | 4318750 | 846 | - | 0.408983 |
NA | APECO1_4056 | putative anti-repressor protein | chromosome | CDS | 2745429 | 696 | + | 0.534483 |
NA | APECO1_3849 | putative regulatory protein, GntR family | chromosome | CDS | 2970416 | 1335 | - | 0.525094 |
NA | APECO1_1713 | hypothetical protein | chromosome | CDS | 308292 | 525 | - | 0.304762 |
NA | APECO1_3503 | hypothetical protein | chromosome | CDS | 3337436 | 564 | - | 0.531915 |
NA | APECO1_2039 | hypothetical protein | chromosome | CDS | 5014642 | 360 | + | 0.547222 |
NA | APECO1_2181 | putative transcriptional regulator | chromosome | CDS | 4843905 | 684 | + | 0.412281 |
NA | APECO1_2045 | putative regulatory protein | chromosome | CDS | 5010406 | 693 | - | 0.425685 |
NA | APECO1_2044 | hypothetical protein | chromosome | CDS | 5011196 | 261 | + | 0.455939 |
NA | APECO1_1989 | putative regulatory protein | chromosome | CDS | 5068932 | 285 | + | 0.431579 |
NA | APECO1_2391 | putative LysR family transcriptional regulator | chromosome | CDS | 4622739 | 885 | - | 0.500565 |
NA | APECO1_2639 | putative transcriptional regulatory protein | chromosome | CDS | 4319796 | 906 | - | 0.461369 |
NA | APECO1_1169 | DNA-binding response regulator in two-component regulatory system with BaeS | chromosome | CDS | 2251162 | 723 | + | 0.540802 |
aaeR | APECO1_3201 | putative DNA-binding transcriptional regulator, efflux system | chromosome | CDS | 3672097 | 930 | + | 0.521505 |
acrR | APECO1_1550 | acrAB operon repressor | chromosome | CDS | 501490 | 648 | + | 0.45679 |
adiY | APECO1_2335 | putative regulatory protein AdiY | chromosome | CDS | 4683211 | 762 | - | 0.41601 |
agaR | APECO1_3298 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3573659 | 825 | - | 0.52 |
araC | APECO1_1920 | transcriptional regulator AraC | chromosome | CDS | 72156 | 897 | + | 0.520624 |
arcA | APECO1_1978 | global response regulator | chromosome | CDS | 5079944 | 717 | - | 0.509066 |
argR | APECO1_3207 | repressor of arg regulon ArgR | chromosome | CDS | 3667282 | 471 | + | 0.47983 |
ascG | APECO1_3812 | ascBF operon repressor | chromosome | CDS | 3011910 | 1020 | - | 0.52451 |
asnC | APECO1_2720 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4220210 | 459 | - | 0.492375 |
basR | APECO1_2338 | BasR, DNA-binding response regulator in two-component regulatory system with BasS | chromosome | CDS | 4679325 | 669 | - | 0.538117 |
betI | APECO1_1677 | regulatory protein BetI | chromosome | CDS | 356305 | 597 | - | 0.562814 |
bglJ | APECO1_2058 | BglJ 2-component transcriptional regulator | chromosome | CDS | 4998159 | 678 | + | 0.448378 |
c | APECO1_1188 | Phage protein C | chromosome | CDS | 920891 | 312 | - | 0.448718 |
cadC | APECO1_2320 | transcriptional activator CadC | chromosome | CDS | 4704808 | 1539 | - | 0.422352 |
cbl | APECO1_6021 | DNA-binding transcriptional activator of cysteine biosynthesis | chromosome | CDS | 2132388 | 951 | - | 0.479495 |
cdaR | APECO1_1823 | carbohydrate diacid regulator | chromosome | CDS | 188283 | 1131 | + | 0.531388 |
celD | APECO1_804 | CelD transcriptional regulator | chromosome | CDS | 1833294 | 843 | - | 0.412811 |
citB | APECO1_1432 | hypothetical protein | chromosome | CDS | 637911 | 681 | + | 0.508076 |
cobB | APECO1_201 | deacetylase of acetyl-CoA synthetase, NAD-dependent | chromosome | CDS | 1161888 | 822 | + | 0.508516 |
cpxR | APECO1_2556 | transcriptional regulatory protein CpxR | chromosome | CDS | 4413948 | 699 | - | 0.51073 |
creB | APECO1_1981 | catabolic regulation response regulator CreB | chromosome | CDS | 5076361 | 690 | + | 0.544928 |
csgD | APECO1_125 | probable csgAB operon transcriptional regulatory protein | chromosome | CDS | 1084902 | 651 | - | 0.417819 |
cytR | APECO1_2536 | transcriptional repressor CytR | chromosome | CDS | 4432443 | 1032 | - | 0.515504 |
dbpA | APECO1_495 | ATP-independent RNA helicase DbpA | chromosome | CDS | 1464582 | 1374 | + | 0.521106 |
deaD | APECO1_3268 | inducible ATP-independent RNA helicase | chromosome | CDS | 3598706 | 1941 | - | 0.552293 |
deoR | APECO1_1253 | DeoR transcriptional repressor | chromosome | CDS | 844792 | 759 | - | 0.503294 |
dgoR | APECO1_2762 | putative galactonate operon transcriptional repressor DgoR | chromosome | CDS | 4168837 | 690 | - | 0.549275 |
dinG | APECO1_1291 | putative ATP-dependent helicase dinG | chromosome | CDS | 797315 | 2151 | + | 0.542073 |
dsdC | APECO1_4172 | D-serine deaminase activator | chromosome | CDS | 2610499 | 936 | - | 0.478632 |
ebgR | APECO1_3341 | Ebg operon repressor | chromosome | CDS | 3522171 | 984 | + | 0.513211 |
envR | APECO1_3175 | putative acrEF/envCD operon repressor | chromosome | CDS | 3703673 | 663 | - | 0.437406 |
evgA | APECO1_4167 | DNA-binding response regulator in two-component regulatory system with EvgS | chromosome | CDS | 2617560 | 615 | + | 0.398374 |
exuR | APECO1_3325 | negative regulator of Exu regulon, ExuT, UxaAC, and UxuB | chromosome | CDS | 3546073 | 792 | + | 0.511364 |
fadR | APECO1_299 | negative regulator for fad regulon, and positive activator of fabA | chromosome | CDS | 1246098 | 720 | + | 0.506944 |
fhlA | APECO1_3794 | formate hydrogenlyase transcriptional activator | chromosome | CDS | 3028588 | 2079 | + | 0.518037 |
fis | APECO1_3177 | DNA-binding protein | chromosome | CDS | 3702139 | 297 | + | 0.468013 |
flgM | APECO1_153 | FlgM | chromosome | CDS | 1112191 | 294 | - | 0.517007 |
fliA | APECO1_963 | flagellar biosynthesis sigma factor FliA | chromosome | CDS | 2006043 | 720 | - | 0.538889 |
fruR | APECO1_1905 | transcriptional repressor of fru operon | chromosome | CDS | 90451 | 1005 | + | 0.553234 |
fucR | APECO1_3726 | L-fucose operon activator | chromosome | CDS | 3108371 | 741 | + | 0.479082 |
gadX | APECO1_2932 | DNA-binding transcriptional dual regulator GadX | chromosome | CDS | 3964560 | 825 | - | 0.410909 |
galR | APECO1_3669 | galactose operon repressor | chromosome | CDS | 3184132 | 1032 | + | 0.52907 |
galS | APECO1_4400 | Mgl repressor and galactose ultrainduction factor | chromosome | CDS | 2354614 | 1041 | - | 0.518732 |
gatR | APECO1_4455 | galactitol utilization operon repressor | chromosome | CDS | 2284569 | 780 | - | 0.466667 |
gcvA | APECO1_3723 | positive regulator of gcv operon | chromosome | CDS | 3110662 | 918 | - | 0.495643 |
glcC | APECO1_3447 | Glc operon transcriptional activator | chromosome | CDS | 3404739 | 825 | + | 0.552727 |
glpR | APECO1_3044 | glycerol-3-phosphate regulon repressor GlpR | chromosome | CDS | 3845438 | 795 | - | 0.532075 |
gntR | APECO1_3020 | DNA-binding transcriptional repressor | chromosome | CDS | 3872679 | 996 | - | 0.543173 |
gpC | APECO1_4459 | immunity repressor | chromosome | CDS | 2280992 | 300 | + | 0.466667 |
greA | APECO1_3251 | transcription elongation factor GreA | chromosome | CDS | 3620969 | 477 | - | 0.486373 |
greB | APECO1_3058 | transcription elongation factor GreB | chromosome | CDS | 3822257 | 477 | + | 0.498952 |
gutM | APECO1_3820 | DNA-binding transcriptional activator of glucitol operon | chromosome | CDS | 3002181 | 360 | + | 0.541667 |
hdfR | APECO1_2706 | transcriptional regulator HdfR | chromosome | CDS | 4240793 | 840 | - | 0.479762 |
hepA | APECO1_1925 | ATP-dependent helicase HepA | chromosome | CDS | 62179 | 2907 | - | 0.55246 |
hipB | APECO1_638 | HipB transcriptional activator | chromosome | CDS | 1645229 | 267 | - | 0.445693 |
hypB | APECO1_3798 | GTP hydrolase involved in nickel liganding into hydrogenases | chromosome | CDS | 3025251 | 873 | + | 0.558992 |
iciA | APECO1_3614 | chromosome replication initiation inhibitor protein | chromosome | CDS | 3254427 | 960 | + | 0.536458 |
iclR | APECO1_2459 | aceBAK operon repressor | chromosome | CDS | 4540731 | 864 | - | 0.539352 |
idnR | APECO1_2130 | L-idonate regulatory protein | chromosome | CDS | 4906793 | 999 | - | 0.468468 |
ilvY | APECO1_2698 | transcriptional activator protein IlvY | chromosome | CDS | 4250539 | 975 | - | 0.563077 |
iscR | APECO1_3994 | DNA-binding transcriptional repressor | chromosome | CDS | 2821036 | 489 | - | 0.533742 |
kdgR | APECO1_882 | transcriptional regulator | chromosome | CDS | 1917223 | 792 | - | 0.496212 |
kdpE | APECO1_1373 | KDP operon transcriptional regulatory protein kdpE | chromosome | CDS | 704654 | 678 | - | 0.566372 |
leuO | APECO1_1908 | leucine transcriptional activator | chromosome | CDS | 86707 | 1029 | + | 0.454811 |
lexA | APECO1_2426 | LexA repressor | chromosome | CDS | 4578336 | 609 | + | 0.518883 |
lldR | APECO1_2851 | DNA-binding transcriptional repressor | chromosome | CDS | 4073713 | 777 | + | 0.53668 |
lrhA | APECO1_4275 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis protein | chromosome | CDS | 2510534 | 939 | - | 0.500533 |
lrp | APECO1_1200 | Leucine-responsive Regulatory protein | chromosome | CDS | 904343 | 549 | + | 0.469945 |
lysR | APECO1_3667 | transcriptional activator protein LysR | chromosome | CDS | 3186554 | 936 | + | 0.532051 |
malI | APECO1_703 | maltose regulon regulatory protein MalI | chromosome | CDS | 1719636 | 1029 | - | 0.544218 |
malT | APECO1_3048 | MalT-maltotriose-ATP transcriptional activator MalT | chromosome | CDS | 3838676 | 2706 | + | 0.538064 |
marA | APECO1_649 | Multiple antibiotic resistance protein MarA | chromosome | CDS | 1657510 | 390 | + | 0.453846 |
marR | APECO1_648 | multiple antibiotic resistance protein MarR | chromosome | CDS | 1657061 | 435 | + | 0.489655 |
melR | APECO1_2333 | MelR regulator of melibiose operon | chromosome | CDS | 4686774 | 909 | - | 0.50165 |
metJ | APECO1_2533 | transcriptional repressor for methionine biosynthesis (MetJ family) | chromosome | CDS | 4436966 | 456 | - | 0.504386 |
metR | APECO1_2648 | DNA-binding transcriptional activator, homocysteine-binding | chromosome | CDS | 4308872 | 954 | - | 0.569182 |
mfd | APECO1_195 | transcription-repair coupling factor; mutation frequency decline | chromosome | CDS | 1152886 | 3495 | - | 0.546209 |
mlc | APECO1_677 | Mlc protein | chromosome | CDS | 1689002 | 1221 | - | 0.519247 |
mntR | APECO1_1275 | DNA-binding transcriptional regulator of mntH | chromosome | CDS | 817458 | 468 | + | 0.540598 |
mprA | APECO1_3838 | DNA-binding transcriptional repressor of microcin B17 synthesis | chromosome | CDS | 2982534 | 531 | + | 0.495292 |
mtlR | APECO1_2856 | mtl operon repressor MtlR | chromosome | CDS | 4064158 | 588 | + | 0.498299 |
nac | APECO1_6022 | DNA-binding transcriptional dual regulator of nitrogen assimilation | chromosome | CDS | 2133440 | 918 | - | 0.488017 |
nagC | APECO1_1396 | transcriptional repressor of nag | chromosome | CDS | 676621 | 1221 | - | 0.527437 |
nanK | APECO1_3221 | N-acetylmannosamine kinase | chromosome | CDS | 3653735 | 876 | - | 0.58105 |
nanR | APECO1_3217 | transcriptional regulator NanR | chromosome | CDS | 3657958 | 792 | - | 0.535354 |
narL | APECO1_338 | nitrate/nitrite response regulator protein NarL | chromosome | CDS | 1287835 | 651 | - | 0.516129 |
narP | APECO1_4365 | nitrate/nitrite response regulator protein NarP | chromosome | CDS | 2400216 | 678 | + | 0.514749 |
nhaR | APECO1_1959 | DNA-binding transcriptional activator | chromosome | CDS | 21322 | 906 | + | 0.474614 |
nikR | APECO1_2973 | nickel responsive regulator NikR | chromosome | CDS | 3917872 | 402 | + | 0.549751 |
nlp | APECO1_3246 | sugar fermentation stimulation protein B | chromosome | CDS | 3627499 | 279 | + | 0.494624 |
nrdR | APECO1_1597 | NrdR repressor protein | chromosome | CDS | 448835 | 450 | + | 0.511111 |
nrfB | APECO1_2384 | NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c | chromosome | CDS | 4630935 | 573 | + | 0.542757 |
nusA | APECO1_3261 | transcription elongation factor NusA | chromosome | CDS | 3608774 | 1488 | - | 0.526882 |
nusG | APECO1_2490 | transcription antitermination protein NusG | chromosome | CDS | 4499324 | 546 | + | 0.512821 |
ompR | APECO1_3059 | osmolarity response regulator OmpR | chromosome | CDS | 3821310 | 720 | - | 0.548611 |
oxyR | APECO1_2504 | hydrogen peroxide-inducible genes activator | chromosome | CDS | 4477539 | 963 | + | 0.554517 |
papX | APECO1_2260 | putative regulator PapX protein | chromosome | CDS | 4764872 | 552 | - | 0.380435 |
pdhR | APECO1_1872 | transcriptional regulator for pyruvate dehydrogenase complex | chromosome | CDS | 128302 | 765 | + | 0.555556 |
phnF | APECO1_2348 | PhnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation | chromosome | CDS | 4668244 | 732 | - | 0.617486 |
phnO | APECO1_2357 | PhnO, putative regulator of phn operon | chromosome | CDS | 4661651 | 435 | - | 0.574713 |
phoB | APECO1_1611 | positive response regulator for pho regulon | chromosome | CDS | 432989 | 690 | + | 0.53913 |
phoP | APECO1_212 | transcriptional regulatory protein PhoP | chromosome | CDS | 1172144 | 672 | - | 0.471726 |
pspA | APECO1_459 | phage shock protein A | chromosome | CDS | 1425312 | 669 | + | 0.491779 |
pspC | APECO1_460 | phage shock protein C | chromosome | CDS | 1426258 | 360 | + | 0.505556 |
pspF | APECO1_458 | psp operon transcriptional activator | chromosome | CDS | 1424169 | 993 | - | 0.51863 |
purR | APECO1_738 | purine nucleotide synthesis repressor | chromosome | CDS | 1754829 | 1026 | + | 0.534113 |
rbsR | APECO1_2710 | DNA-binding transcriptional repressor of ribose metabolism | chromosome | CDS | 4231901 | 984 | + | 0.502033 |
rcsA | APECO1_990 | positive regulator for ctr capsule biosynthesis, positive transcription factor | chromosome | CDS | 2031293 | 624 | + | 0.38141 |
rcsB | APECO1_4342 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN | chromosome | CDS | 2425170 | 651 | + | 0.471582 |
recG | APECO1_2809 | ATP-dependent DNA helicase RecG | chromosome | CDS | 4116505 | 2115 | + | 0.568794 |
relA | APECO1_3747 | (p)ppGpp synthetase I/GTP pyrophosphokinase | chromosome | CDS | 3080381 | 2235 | - | 0.540492 |
rfaH | APECO1_2615 | transcriptional activator RfaH | chromosome | CDS | 4342775 | 489 | - | 0.492843 |
rhaR | APECO1_2562 | DNA-binding transcriptional activator, L-rhamnose-binding | chromosome | CDS | 4407532 | 939 | + | 0.498403 |
rhlB | APECO1_2693 | ATP-dependent RNA helicase | chromosome | CDS | 4257156 | 1266 | - | 0.521327 |
rhlE | APECO1_1293 | putative ATP-dependent RNA helicase RhlE | chromosome | CDS | 795417 | 1362 | + | 0.562408 |
rho | APECO1_2691 | transcription termination factor Rho | chromosome | CDS | 4259136 | 1332 | + | 0.501502 |
rnc | APECO1_3964 | RNase III | chromosome | CDS | 2857463 | 681 | - | 0.512482 |
rnk | APECO1_1441 | regulator of nucleoside diphosphate kinase | chromosome | CDS | 627606 | 411 | - | 0.549878 |
rnr | APECO1_2213 | exoribonuclease R, RNase R | chromosome | CDS | 4814148 | 2484 | + | 0.546296 |
rob | APECO1_1983 | right origin-binding protein | chromosome | CDS | 5074795 | 870 | - | 0.522988 |
rpiR | APECO1_2361 | putative transcriptional regulator RpiR | chromosome | CDS | 4658767 | 924 | - | 0.479437 |
rpoA | APECO1_3152 | RNA polymerase, alpha subunit | chromosome | CDS | 3730765 | 990 | - | 0.522222 |
rpoB | APECO1_2486 | DNA-directed RNA polymerase beta chain protein RpoB | chromosome | CDS | 4502672 | 4062 | + | 0.524126 |
rpoC | APECO1_2485 | RNA polymerase, beta prime subunit RpoC | chromosome | CDS | 4506810 | 4224 | + | 0.536695 |
rpoD | APECO1_3348 | RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures | chromosome | CDS | 3513763 | 1842 | + | 0.530402 |
rpoE | APECO1_3958 | RNA polymerase, sigma 24 (sigma E) factor | chromosome | CDS | 2863512 | 609 | - | 0.487685 |
rpoH | APECO1_2992 | RNA polymerase sigma factor | chromosome | CDS | 3899043 | 855 | - | 0.534503 |
rpoN | APECO1_3233 | DNA-directed RNA polymerase subunit N | chromosome | CDS | 3637307 | 1434 | + | 0.524407 |
rpoS | APECO1_3782 | sigma factor RpoS | chromosome | CDS | 3043321 | 1029 | - | 0.522838 |
rpoZ | APECO1_2812 | RNA polymerase, omega subunit | chromosome | CDS | 4113434 | 276 | + | 0.532609 |
rstA | APECO1_691 | transcriptional regulatory protein RstA | chromosome | CDS | 1703781 | 756 | + | 0.490741 |
rtcA | APECO1_3047 | RNA 3'-terminal phosphate cyclase, chain B | chromosome | CDS | 3841424 | 1020 | - | 0.593137 |
rtcR | APECO1_3045 | transcriptional regulatory protein RtcR | chromosome | CDS | 3843859 | 1560 | + | 0.549359 |
sdiA | APECO1_957 | DNA-binding transcriptional activator | chromosome | CDS | 2001083 | 723 | - | 0.459198 |
slyA | APECO1_725 | transcriptional regulator SlyA | chromosome | CDS | 1741779 | 441 | - | 0.47619 |
soxR | APECO1_2394 | redox-sensitive transcriptional activator SoxR | chromosome | CDS | 4618543 | 465 | + | 0.511828 |
spoT | APECO1_2811 | guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | chromosome | CDS | 4113875 | 1962 | + | 0.540265 |
srlR | APECO1_3819 | DNA-bindng transcriptional repressor | chromosome | CDS | 3002607 | 774 | + | 0.48708 |
srmB | APECO1_39552 | putative transcriptional regulator YfiE | chromosome | CDS | 2866971 | 1335 | + | 0.544569 |
tdcA | APECO1_3306 | transcriptional activator of tdc operon | chromosome | CDS | 3564933 | 939 | - | 0.42279 |
torR | APECO1_88 | TorCAD operon transcriptional regulatory protein torR | chromosome | CDS | 1044502 | 693 | - | 0.535354 |
treR | APECO1_2151 | trehalose operon repressor | chromosome | CDS | 4881092 | 948 | - | 0.542194 |
trpR | APECO1_1986 | trp operon repressor | chromosome | CDS | 5073173 | 327 | + | 0.538226 |
ttk | APECO1_2820 | putative transcriptional regulator | chromosome | CDS | 4105776 | 639 | + | 0.528951 |
tyrR | APECO1_476 | transcriptional regulatory protein TyrR | chromosome | CDS | 1443891 | 1542 | + | 0.520752 |
uidR | APECO1_701 | repressor for uid operon | chromosome | CDS | 1717938 | 591 | - | 0.505922 |
umuD | APECO1_295 | mutagenesis and repair protein UmuD | chromosome | CDS | 1241927 | 420 | + | 0.480952 |
uxuR | APECO1_2107 | UxuR, uxu operon transcriptional regulator | chromosome | CDS | 4934355 | 774 | + | 0.541344 |
xapR | APECO1_4140 | xanthosine operon regulatory protein | chromosome | CDS | 2653896 | 900 | - | 0.51 |
xylR | APECO1_2881 | DNA-binding transcriptional activator, xylose-binding | chromosome | CDS | 4033625 | 1179 | + | 0.486853 |
yafP | APECO1_1735 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 284687 | 453 | + | 0.439294 |
yahA | APECO1_1675 | putative DNA-binding transcriptional regulator | chromosome | CDS | 359926 | 1095 | + | 0.454795 |
yahB | APECO1_1674 | putative DNA-bindng transcriptional regulator | chromosome | CDS | 361062 | 933 | - | 0.501608 |
yaiV | APECO1_1633 | hypothetical protein | chromosome | CDS | 410286 | 669 | + | 0.402093 |
yajF | APECO1_2804 | hypothetical protein | chromosome | CDS | 4124064 | 966 | - | 0.531056 |
yajF | APECO1_1615 | possible NAGC-like transcriptional regulator | chromosome | CDS | 425844 | 1035 | + | 0.53913 |
ybaO | APECO1_1564 | putative transcriptional regulator YbaO | chromosome | CDS | 483958 | 612 | + | 0.485294 |
ybbI | APECO1_1525 | putative transcriptional regulator | chromosome | CDS | 531016 | 408 | + | 0.566176 |
ybbU | APECO1_1508 | putative regulator of allantoin regulon YbbU | chromosome | CDS | 545350 | 816 | + | 0.529412 |
ybcM | APECO1_973 | Hypothetical transcriptional regulator | chromosome | CDS | 2017819 | 798 | - | 0.370927 |
ybdM | APECO1_1448 | hypothetical protein | chromosome | CDS | 620207 | 630 | - | 0.463492 |
ybdO | APECO1_1446 | putative transcriptional regulator YbdO | chromosome | CDS | 622176 | 939 | - | 0.371672 |
ybhD | APECO1_1321 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 764412 | 1017 | - | 0.446411 |
yccR | APECO1_64 | hypothetical protein | chromosome | CDS | 1017426 | 630 | + | 0.477778 |
ycdC | APECO1_104 | transcriptional regulator YcdC | chromosome | CDS | 1060130 | 639 | + | 0.507042 |
ycfQ | APECO1_192 | putative transcriptional regulator | chromosome | CDS | 1150567 | 711 | - | 0.506329 |
ycgE | APECO1_277 | putative transcriptional regulator | chromosome | CDS | 1226960 | 732 | - | 0.48224 |
ychA | APECO1_3981 | putative transcriptional regulator YchA | chromosome | CDS | 2837055 | 1194 | + | 0.514238 |
ycjZ | APECO1_482 | hypothetical transcriptional regulator YcjZ | chromosome | CDS | 1449827 | 900 | + | 0.47 |
ycjZ | APECO1_1697 | putative transcriptional regulator | chromosome | CDS | 329341 | 969 | + | 0.50258 |
ydcI | APECO1_570 | putative transcriptional regulator YdcI | chromosome | CDS | 1556337 | 1065 | - | 0.48169 |
ydcN | APECO1_579 | hypothetical protein | chromosome | CDS | 1566614 | 537 | + | 0.497207 |
ydcR | APECO1_581 | fused predicted DNA-binding transcriptional regulator/predicted amino transferase | chromosome | CDS | 1570000 | 1407 | + | 0.508884 |
ydhB | APECO1_739 | putative transcriptional regulator LYSR-type | chromosome | CDS | 1755851 | 933 | - | 0.535906 |
ydhM | APECO1_731 | putative DNA-binding transcriptional regulator | chromosome | CDS | 1747411 | 600 | + | 0.525 |
ydiP | APECO1_772 | putative DNA-binding transcriptional regulator | chromosome | CDS | 1795205 | 912 | - | 0.427632 |
yeaM | APECO1_856 | putative transcriptional regulator | chromosome | CDS | 1888231 | 822 | - | 0.50365 |
yebK | APECO1_903 | hex regulon repressor | chromosome | CDS | 1944565 | 870 | + | 0.489655 |
yedW | APECO1_1004 | putative 2-component transcriptional regulator | chromosome | CDS | 2045401 | 783 | - | 0.436782 |
yeeY | APECO1_1112 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2176140 | 951 | - | 0.513144 |
yegW | APECO1_4444 | putative transcriptional regulator | chromosome | CDS | 2295569 | 747 | - | 0.519411 |
yehT | APECO1_4424 | putative response regulator in two-component system with YehU | chromosome | CDS | 2326240 | 735 | - | 0.502041 |
yehV | APECO1_4422 | MerR-like regulator A | chromosome | CDS | 2328863 | 732 | + | 0.528689 |
yeiE | APECO1_4394 | DNA-binding transcriptional regulator | chromosome | CDS | 2362635 | 882 | - | 0.537415 |
yejH | APECO1_4371 | putative ATP-dependet helicase | chromosome | CDS | 2393372 | 1761 | + | 0.533788 |
yfaX | APECO1_4313 | putative transcriptional regulator YfaX | chromosome | CDS | 2470139 | 783 | - | 0.509579 |
yfeD | APECO1_4142 | putative DNA-binding transcriptional regulator | chromosome | CDS | 2651271 | 393 | + | 0.463104 |
yfeG | APECO1_4111 | ethanolamine operon regulatory protein | chromosome | CDS | 2683101 | 1053 | - | 0.526116 |
yfhH | APECO1_3970 | hypothetical protein | chromosome | CDS | 2852767 | 921 | + | 0.508143 |
yfiE | APECO1_3955 | putative transcriptional regulator YfiE | chromosome | CDS | 2868338 | 927 | - | 0.483279 |
ygaA | APECO1_3817 | putative sigma-54-dependent transcriptional regulator YgaA | chromosome | CDS | 3004335 | 1515 | - | 0.566337 |
ygaE | APECO1_38572 | putative transcriptional regulator YgaE | chromosome | CDS | 2965542 | 681 | + | 0.53304 |
ygaV | APECO1_3855 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2967097 | 300 | + | 0.52 |
ygbI | APECO1_3789 | putative transcriptional regulator YgbI | chromosome | CDS | 3035182 | 798 | - | 0.518797 |
ygfI | APECO1_3612 | putative transcriptional regulator YgfI | chromosome | CDS | 3256641 | 897 | - | 0.443701 |
ygiX | APECO1_3396 | transcriptional regulatory protein QseB | chromosome | CDS | 3460091 | 660 | + | 0.525758 |
yhaJ | APECO1_3316 | putative DNA-binding transcriptional regulator | chromosome | CDS | 3552132 | 897 | - | 0.560758 |
yhcO | APECO1_3205 | putative barnase inhibitor | chromosome | CDS | 3668434 | 273 | - | 0.424908 |
yhiF | APECO1_2950 | predicted DNA-binding ranscriptional regulator | chromosome | CDS | 3945238 | 531 | + | 0.399247 |
yhiW | APECO1_2933 | DNA-binding transcriptional activator YhiW | chromosome | CDS | 3963464 | 729 | - | 0.410151 |
yhjB | APECO1_2928 | putative DNA-binding response regulator in two-component regulatory system | chromosome | CDS | 3970865 | 603 | - | 0.474295 |
yiaC | APECO1_2898 | putative acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 4013702 | 441 | + | 0.519274 |
yiaG | APECO1_2893 | putative transcriptional regulator | chromosome | CDS | 4019528 | 291 | + | 0.436426 |
yiaJ | APECO1_2876 | predicted DNA-binding transcriptional repressor | chromosome | CDS | 4040243 | 849 | - | 0.518257 |
yidL | APECO1_2773 | predicted DNA-binding transcriptional regulator YidL | chromosome | CDS | 4157989 | 897 | + | 0.433668 |
yieP | APECO1_2708 | predicted transcriptional regulator | chromosome | CDS | 4234300 | 693 | - | 0.493506 |
yiiD | APECO1_2579 | predicted acetyltransferase | chromosome | CDS | 4388900 | 990 | + | 0.540404 |
yijC | APECO1_2500 | putative TetR-family transcriptional regulatory protein YijC | chromosome | CDS | 4482789 | 705 | + | 0.526241 |
yijO | APECO1_2513 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4463797 | 852 | - | 0.530516 |
yjaB | APECO1_2464 | hypothetical protein | chromosome | CDS | 4534208 | 444 | - | 0.531532 |
yjaE | APECO1_2480 | Regulator of sigma D | chromosome | CDS | 4516870 | 477 | - | 0.480084 |
yjcT | APECO1_2366 | D-allose kinase | chromosome | CDS | 4653536 | 930 | - | 0.536559 |
yjdC | APECO1_2253 | hypothetical protein | chromosome | CDS | 4770569 | 600 | - | 0.535 |
yjdG | APECO1_2328 | transcriptional regulatory protein DcuR | chromosome | CDS | 4693725 | 720 | - | 0.494444 |
yjeB | APECO1_2214 | hypothetical protein | chromosome | CDS | 4813726 | 426 | + | 0.483568 |
yjfJ | APECO1_2210 | predicted transcriptional regulator effector protein | chromosome | CDS | 4818001 | 699 | + | 0.509299 |
yjfQ | APECO1_2201 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4825145 | 756 | - | 0.503968 |
yjgM | APECO1_2138 | putative acetyltransferase YjgM | chromosome | CDS | 4895605 | 504 | - | 0.513889 |
yjiE | APECO1_2091 | putative DNA-binding transcriptional regulator | chromosome | CDS | 4956235 | 729 | - | 0.522634 |
yjjM | APECO1_2067 | putative DNA-binding transcriptional regulator | chromosome | CDS | 4988941 | 906 | - | 0.469095 |
yjjQ | APECO1_2059 | hypothetical protein | chromosome | CDS | 4997476 | 726 | + | 0.450413 |
ykgA | APECO1_1693 | putative transcriptional regulator | chromosome | CDS | 337148 | 891 | - | 0.432099 |
ykgK | APECO1_1703 | hypothetical protein | chromosome | CDS | 322930 | 591 | - | 0.397631 |
ylcA | APECO1_1477 | putative 2-component transcriptional regulator | chromosome | CDS | 581937 | 684 | - | 0.545322 |
yneJ | APECO1_6452 | aldehyde-dehydrogenase like protein YneI | chromosome | CDS | 1653749 | 882 | + | 0.539683 |
ynfL | APECO1_678 | putative transcriptional regulator | chromosome | CDS | 1690357 | 894 | - | 0.521253 |
ypdB | APECO1_4156 | YpdB, predicted response regulator in two-component system with YpdA | chromosome | CDS | 2634263 | 663 | + | 0.479638 |
ypdC | APECO1_4155 | putative DNA-binding protein | chromosome | CDS | 2634938 | 858 | + | 0.526807 |
yqgE | APECO1_3573 | hypothetical protein | chromosome | CDS | 3287684 | 564 | + | 0.510638 |
yqhC | APECO1_3415 | putative DNA-binding transcriptional regulator | chromosome | CDS | 3437762 | 1068 | - | 0.501873 |
yqjI | APECO1_3345 | hypothetical protein | chromosome | CDS | 3517484 | 624 | + | 0.538462 |
yrbA | APECO1_3244 | putative DNA-binding transcriptional regulator | chromosome | CDS | 3629139 | 270 | - | 0.503704 |
ytfH | APECO1_2174 | hypothetical protein | chromosome | CDS | 4850495 | 492 | + | 0.51626 |
zntR | APECO1_3155 | zinc-responsive transcriptional regulator | chromosome | CDS | 3729430 | 426 | - | 0.5 |