Gene list
Applied filters:
COG category: Transcription
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 353
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | c5477 | hypothetical protein | chromosome | CDS | 5218354 | 285 | + | 0.431579 |
NA | c4179 | Hypothetical protein yiaG | chromosome | CDS | 3961054 | 297 | + | 0.451178 |
NA | c3224 | hypothetical protein | chromosome | CDS | 3079201 | 1335 | - | 0.521348 |
NA | c5379 | hypothetical protein | chromosome | CDS | 5126603 | 906 | - | 0.551876 |
NA | c4482 | Hypothetical protein yajF | chromosome | CDS | 4263738 | 966 | - | 0.528986 |
NA | c3840 | Hypothetical protein ygjM | chromosome | CDS | 3674123 | 417 | - | 0.484412 |
NA | c0903 | Transcriptional regulator mntR | chromosome | CDS | 875537 | 468 | + | 0.540598 |
NA | c3190 | hypothetical protein | chromosome | CDS | 3056243 | 360 | - | 0.555556 |
NA | c3307 | hypothetical protein | chromosome | CDS | 3150362 | 435 | - | 0.512644 |
NA | c1547 | hypothetical protein | chromosome | CDS | 1413040 | 381 | + | 0.427822 |
NA | c4549 | hypothetical protein | chromosome | CDS | 4326878 | 210 | - | 0.314286 |
NA | c5346 | hypothetical protein | chromosome | CDS | 5089697 | 555 | - | 0.414414 |
NA | c5355 | hypothetical protein | chromosome | CDS | 5097887 | 522 | - | 0.509579 |
NA | c0934 | hypothetical protein | chromosome | CDS | 911434 | 927 | - | 0.380798 |
NA | c2423 | Putataive AraC type regulator | chromosome | CDS | 2225978 | 960 | + | 0.5625 |
NA | c0306 | hypothetical protein | chromosome | CDS | 282559 | 207 | - | 0.555556 |
NA | c0310 | hypothetical protein | chromosome | CDS | 286352 | 390 | + | 0.55641 |
NA | c5304 | hypothetical protein | chromosome | CDS | 5044493 | 720 | + | 0.406944 |
NA | c4550 | hypothetical protein | chromosome | CDS | 4327162 | 570 | - | 0.401754 |
NA | c2206 | hypothetical protein | chromosome | CDS | 2038120 | 333 | - | 0.483483 |
NA | c3750 | Putative regulator | chromosome | CDS | 3583042 | 750 | + | 0.445333 |
NA | c5295 | hypothetical protein | chromosome | CDS | 5035027 | 492 | + | 0.45935 |
NA | c2212 | Probable ATP-dependent helicase yoaA | chromosome | CDS | 2042997 | 1911 | - | 0.55573 |
NA | c1546 | Repressor protein | chromosome | CDS | 1412427 | 423 | - | 0.472813 |
NA | c4276 | Putative regulator | chromosome | CDS | 4057834 | 756 | + | 0.431217 |
NA | c5058 | Putative transcriptional regulator | chromosome | CDS | 4834225 | 885 | - | 0.500565 |
NA | c2896 | hypothetical protein | chromosome | CDS | 2755791 | 621 | - | 0.375201 |
NA | c3638 | N-acetylmannosamine kinase | chromosome | CDS | 3477696 | 876 | - | 0.406393 |
NA | c4566 | Hypothetical transcriptional regulator yfjR | chromosome | CDS | 4335521 | 681 | + | 0.502203 |
NA | c1760 | Putative transcriptional repressor | chromosome | CDS | 1595709 | 666 | + | 0.457958 |
NA | c4838 | hypothetical protein | chromosome | CDS | 4602054 | 291 | + | 0.487972 |
NA | c0317 | hypothetical protein | chromosome | CDS | 288649 | 138 | + | 0.463768 |
NA | c1810 | hypothetical protein | chromosome | CDS | 1642836 | 816 | - | 0.458333 |
NA | c0765 | Putative transcriptional regulator | chromosome | CDS | 746931 | 762 | + | 0.503937 |
NA | c0337 | hypothetical protein | chromosome | CDS | 308229 | 1032 | + | 0.467054 |
NA | c2615 | hypothetical protein | chromosome | CDS | 2460998 | 780 | - | 0.466667 |
NA | c5378 | hypothetical protein | chromosome | CDS | 5123325 | 3279 | - | 0.522415 |
NA | c3770 | hypothetical protein | chromosome | CDS | 3603039 | 888 | - | 0.516892 |
NA | c4616 | hypothetical protein | chromosome | CDS | 4376208 | 690 | - | 0.547826 |
NA | c1802 | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 1635277 | 900 | + | 0.468889 |
NA | c4556 | hypothetical protein | chromosome | CDS | 4329644 | 234 | - | 0.508547 |
NA | c0943 | hypothetical protein | chromosome | CDS | 917799 | 306 | + | 0.454248 |
NA | c3306 | hypothetical protein | chromosome | CDS | 3149763 | 519 | - | 0.526012 |
NA | c5207 | hypothetical protein | chromosome | CDS | 4962202 | 156 | - | 0.564103 |
NA | c4987 | Putative transcriptional regulator of sorbose uptake and utilization genes | chromosome | CDS | 4764865 | 1032 | - | 0.491279 |
NA | c3819 | hypothetical protein | chromosome | CDS | 3653641 | 1107 | + | 0.523035 |
NA | c3976 | N-acetylmannosamine kinase | chromosome | CDS | 3794637 | 909 | - | 0.579758 |
NA | c0503 | Hypothetical protein yajF | chromosome | CDS | 484051 | 1047 | + | 0.538682 |
NA | c0330 | Putative deoxyribose operon repressor | chromosome | CDS | 300643 | 786 | - | 0.461832 |
NA | c2492 | Putative carbohydrate kinase | chromosome | CDS | 2331944 | 1215 | + | 0.414815 |
NA | c1659 | Glycerol metabolism operon Regulatory protein | chromosome | CDS | 1494264 | 1929 | + | 0.516848 |
NA | c4020 | hypothetical protein | chromosome | CDS | 3837253 | 831 | + | 0.480144 |
NA | c5192 | hypothetical protein | chromosome | CDS | 4950287 | 234 | - | 0.521368 |
NA | c0689 | Hypothetical protein ybdM | chromosome | CDS | 676750 | 630 | - | 0.463492 |
NA | c0392 | hypothetical protein | chromosome | CDS | 371227 | 525 | - | 0.306667 |
NA | c3397 | hypothetical protein | chromosome | CDS | 3237749 | 1434 | + | 0.515342 |
NA | c1874 | hypothetical protein | chromosome | CDS | 1709348 | 237 | + | 0.476793 |
NA | c0411 | Putative LysR-like transcriptional regulator | chromosome | CDS | 391165 | 990 | + | 0.425253 |
NA | c0435 | Hypothetical protein yahA | chromosome | CDS | 422858 | 1095 | + | 0.454795 |
NA | c0428 | hypothetical protein | chromosome | CDS | 413296 | 705 | - | 0.483688 |
NA | c2236 | Transcriptional regulator kdgR | chromosome | CDS | 2060980 | 792 | - | 0.498737 |
NA | c4375 | Hypothetical protein yiaG | chromosome | CDS | 4158515 | 291 | + | 0.443299 |
NA | c1551 | Putative exclusion protein ren of prophage | chromosome | CDS | 1415485 | 291 | + | 0.501718 |
NA | c5025 | Putative regulator | chromosome | CDS | 4800915 | 1062 | + | 0.502825 |
NA | c4494 | Putative transcriptional regulator | chromosome | CDS | 4277738 | 1095 | - | 0.432877 |
NA | c3565 | Putative response regulator | chromosome | CDS | 3414691 | 723 | - | 0.466113 |
NA | c2484 | Hypothetical protein ybdM | chromosome | CDS | 2324842 | 645 | - | 0.505426 |
NA | c4760 | hypothetical protein | chromosome | CDS | 4526160 | 846 | - | 0.407801 |
NA | c5208 | Hypothetical protein ybdM | chromosome | CDS | 4962284 | 564 | - | 0.531915 |
NA | c5160 | Hypothetical transcriptional regulator yfjR | chromosome | CDS | 4927861 | 681 | - | 0.500734 |
NA | c4423 | hypothetical protein | chromosome | CDS | 4205257 | 684 | + | 0.394737 |
NA | c4761 | hypothetical protein | chromosome | CDS | 4527206 | 906 | - | 0.460265 |
NA | c3650 | hypothetical protein | chromosome | CDS | 3486747 | 261 | + | 0.528736 |
NA | c0365 | hypothetical protein | chromosome | CDS | 346408 | 531 | + | 0.297552 |
NA | c4488 | Putative transcriptional Antiterminator | chromosome | CDS | 4268467 | 1599 | - | 0.412133 |
NA | c3409 | Antiterminator | chromosome | CDS | 3253995 | 882 | - | 0.34127 |
NA | c2499 | hypothetical protein | chromosome | CDS | 2338699 | 402 | - | 0.527363 |
NA | c5191 | hypothetical protein | chromosome | CDS | 4950188 | 447 | + | 0.521253 |
NA | c1960 | hypothetical protein | chromosome | CDS | 1801647 | 699 | + | 0.410587 |
NA | c3600 | hypothetical protein | chromosome | CDS | 3442798 | 561 | + | 0.411765 |
NA | c3273 | Hypothetical protein ygjM | chromosome | CDS | 3121577 | 420 | - | 0.464286 |
NA | c4779 | Putative transcriptional regulator | chromosome | CDS | 4542201 | 855 | - | 0.521637 |
NA | c3192 | Unknown protein encoded by cryptic prophage | chromosome | CDS | 3057060 | 942 | - | 0.527601 |
NA | c0412 | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 392279 | 969 | + | 0.499484 |
NA | c3197 | Putative repressor protein of prophage | chromosome | CDS | 3059233 | 627 | + | 0.433812 |
acrR | c0582 | Potential acrAB operon repressor | chromosome | CDS | 560411 | 648 | + | 0.458333 |
adiY | c5121 | Putative Regulatory protein adiY | chromosome | CDS | 4895704 | 762 | - | 0.417323 |
agaR | c3886 | Putative aga operon transcriptional repressor | chromosome | CDS | 3715175 | 810 | - | 0.517284 |
alpA | c1169 | Prophage CP4-57 Regulatory protein alpA | chromosome | CDS | 1132071 | 249 | + | 0.441767 |
araC | c0076 | Arabinose operon Regulatory protein | chromosome | CDS | 72901 | 846 | + | 0.529551 |
arcA | c5488 | Aerobic respiration control protein arcA | chromosome | CDS | 5229366 | 717 | - | 0.506276 |
argR | c3992 | arginine repressor | chromosome | CDS | 3808184 | 471 | + | 0.481953 |
asnC | c4671 | Regulatory protein asnC | chromosome | CDS | 4427578 | 459 | - | 0.488017 |
baeR | c2605 | Transcriptional Regulatory protein baeR | chromosome | CDS | 2450862 | 723 | + | 0.538036 |
basR | c5118 | Transcriptional Regulatory protein basR/pmrA | chromosome | CDS | 4891818 | 669 | - | 0.539611 |
betI | c0433 | transcriptional regulator BetI | chromosome | CDS | 419239 | 606 | - | 0.559406 |
bglG | c4646 | Cryptic beta-glucoside bgl operon Antiterminator | chromosome | CDS | 4406856 | 861 | - | 0.430894 |
bglJ | c5445 | Transcriptional activator protein bglJ | chromosome | CDS | 5193149 | 678 | + | 0.446903 |
cadC | c5142 | Transcriptional activator cadC | chromosome | CDS | 4917294 | 1539 | - | 0.421702 |
cbl | c2447 | Transcriptional regulator cbl | chromosome | CDS | 2259937 | 951 | + | 0.483701 |
celD | c2134 | Cel operon repressor | chromosome | CDS | 1972449 | 843 | - | 0.410439 |
citB | c0711 | Transcriptional Regulatory protein dpiA | chromosome | CDS | 694455 | 681 | + | 0.509545 |
cobB | c1395 | NAD-dependent deacetylase | chromosome | CDS | 1323747 | 822 | + | 0.510949 |
cpxR | c4864 | Transcriptional Regulatory protein cpxR | chromosome | CDS | 4624630 | 699 | - | 0.516452 |
creB | c5485 | Transcriptional Regulatory protein creB | chromosome | CDS | 5225783 | 690 | + | 0.546377 |
csgD | c1302 | Probable csgAB operon transcriptional Regulatory protein | chromosome | CDS | 1246045 | 651 | - | 0.417819 |
csiE | c3061 | Stationary phase inducible protein csiE | chromosome | CDS | 2933414 | 1302 | + | 0.518433 |
cspA | c4377 | Cold shock protein cspA | chromosome | CDS | 4159086 | 213 | + | 0.488263 |
cspB | c3184 | Cold shock-like protein cspB | chromosome | CDS | 3052133 | 216 | - | 0.347222 |
cspC | c2231 | Cold shock-like protein cspC | chromosome | CDS | 2058898 | 210 | - | 0.461905 |
cspD | c1017 | Cold shock-like protein cspD | chromosome | CDS | 976495 | 255 | - | 0.470588 |
cspE | c0714 | cold shock protein E | chromosome | CDS | 697799 | 294 | + | 0.42517 |
cspF | c3185 | Cold shock-like protein cspF | chromosome | CDS | 3052649 | 213 | + | 0.483568 |
cspG | c1123 | Cold shock-like protein cspG | chromosome | CDS | 1086202 | 213 | + | 0.431925 |
cspH | c1122 | Cold shock-like protein cspH | chromosome | CDS | 1085704 | 213 | - | 0.474178 |
cspI | c3177 | Cold shock-like protein cspI | chromosome | CDS | 3048683 | 216 | - | 0.402778 |
cusR | c0657 | Transcriptional Regulatory protein cusR | chromosome | CDS | 638381 | 684 | - | 0.545322 |
cysB | c1742 | transcriptional regulator for cysteine regulon | chromosome | CDS | 1578166 | 975 | + | 0.485128 |
cytR | c4887 | Transcriptional repressor cytR | chromosome | CDS | 4643125 | 1026 | - | 0.516569 |
dbpA | c1817 | ATP-independent RNA helicase dbpA | chromosome | CDS | 1648163 | 1374 | + | 0.517467 |
deaD | c3916 | Cold-shock DEAD-box protein A | chromosome | CDS | 3739604 | 1956 | - | 0.551125 |
deoR | c0925 | Deoxyribose operon repressor | chromosome | CDS | 902870 | 759 | - | 0.503294 |
dinG | c0883 | Probable ATP-dependent helicase dinG | chromosome | CDS | 855392 | 2151 | + | 0.543933 |
dsdC | c2899 | D-serine deaminase activator | chromosome | CDS | 2759070 | 954 | - | 0.472746 |
ebgR | c3832 | Ebg operon repressor | chromosome | CDS | 3662061 | 984 | + | 0.511179 |
emrR | c3237 | Transcriptional repressor mprA | chromosome | CDS | 3091317 | 531 | + | 0.497175 |
envR | c4030 | Potential acrEF/envCD operon repressor | chromosome | CDS | 3844571 | 663 | - | 0.435897 |
evgA | c2905 | Positive transcription regulator evgA | chromosome | CDS | 2766143 | 615 | + | 0.396748 |
exuR | c3852 | Exu regulon transcriptional regulator | chromosome | CDS | 3686633 | 792 | + | 0.510101 |
fadR | c1635 | fatty acid metabolism regulator | chromosome | CDS | 1472254 | 720 | + | 0.509722 |
fhlA | c3291 | Formate hydrogenlyase transcriptional activator | chromosome | CDS | 3134994 | 2115 | + | 0.518203 |
fis | c4027 | DNA-binding protein Fis | chromosome | CDS | 3843039 | 297 | + | 0.468013 |
flgM | c1340 | Negative regulator of flagellin synthesis | chromosome | CDS | 1273338 | 294 | - | 0.530612 |
fliA | c2337 | flagellar biosynthesis sigma factor FliA | chromosome | CDS | 2150458 | 720 | - | 0.543056 |
focX | c1247 | Putative Regulatory protein | chromosome | CDS | 1196018 | 552 | + | 0.38587 |
fruR | c0098 | Fructose repressor | chromosome | CDS | 91855 | 1005 | + | 0.551244 |
fucR | c3375 | L-fucose operon activator | chromosome | CDS | 3214225 | 741 | + | 0.479082 |
galR | c3434 | Galactose operon repressor | chromosome | CDS | 3284632 | 1032 | + | 0.530039 |
galS | c2685 | Mgl repressor and galactose ultrainduction factor | chromosome | CDS | 2532323 | 1047 | - | 0.516714 |
gcvA | c3378 | Glycine cleavage system transcriptional activator | chromosome | CDS | 3216516 | 918 | - | 0.496732 |
glcC | c3710 | Glc operon transcriptional activator | chromosome | CDS | 3542871 | 825 | + | 0.546667 |
glpR | c4200 | Glycerol-3-phosphate regulon repressor | chromosome | CDS | 3986472 | 810 | - | 0.528395 |
gntR | c4227 | Gluconate utilization system GNT-I transcriptional repressor | chromosome | CDS | 4017143 | 996 | - | 0.543173 |
greA | c3938 | transcription elongation factor GreA | chromosome | CDS | 3761871 | 477 | - | 0.486373 |
greB | c4183 | transcription elongation factor GreB | chromosome | CDS | 3963641 | 513 | + | 0.497076 |
gutM | c3260 | Glucitol operon activator protein | chromosome | CDS | 3111091 | 360 | + | 0.538889 |
hepA | c0070 | ATP-dependent helicase HepA | chromosome | CDS | 62160 | 2907 | - | 0.55074 |
hipB | c1941 | Protein hipB | chromosome | CDS | 1783191 | 285 | - | 0.45614 |
hypB | c3287 | Hydrogenase isoenzyme nickel incorporation protein hypB | chromosome | CDS | 3131693 | 873 | + | 0.556701 |
iciA | c3497 | chromosome replication initiation inhibitor protein | chromosome | CDS | 3355639 | 960 | + | 0.5375 |
iclR | c4975 | Acetate operon repressor | chromosome | CDS | 4751557 | 885 | - | 0.533333 |
idnR | c5365 | L-idonate Regulatory protein | chromosome | CDS | 5109075 | 1029 | - | 0.47036 |
ilvY | c4695 | Transcriptional activator protein ilvY | chromosome | CDS | 4457912 | 975 | - | 0.553846 |
kdpE | c0779 | KDP operon transcriptional Regulatory protein kdpE | chromosome | CDS | 761791 | 678 | - | 0.569322 |
leuO | c0093 | leucine transcriptional activator | chromosome | CDS | 88195 | 945 | + | 0.462434 |
lexA | c5014 | LexA repressor | chromosome | CDS | 4789145 | 609 | + | 0.518883 |
lldR | c4426 | Putative L-lactate dehydrogenase operon Regulatory protein | chromosome | CDS | 4213372 | 792 | + | 0.532828 |
lrhA | c2830 | Probable transcriptional regulator lrhA | chromosome | CDS | 2688207 | 939 | - | 0.500533 |
lrp | c1026 | Leucine-responsive Regulatory protein | chromosome | CDS | 986669 | 549 | + | 0.471767 |
lysR | c3436 | Transcriptional activator protein lysR | chromosome | CDS | 3287054 | 936 | + | 0.532051 |
malI | c2012 | Maltose regulon Regulatory protein malI | chromosome | CDS | 1858673 | 1029 | - | 0.544218 |
malT | c4196 | transcriptional regulator MalT | chromosome | CDS | 3979709 | 2706 | + | 0.539542 |
marA | c1953 | Multiple antibiotic resistance protein marA | chromosome | CDS | 1795473 | 390 | + | 0.448718 |
marR | c1952 | Multiple antibiotic resistance protein marR | chromosome | CDS | 1795024 | 435 | + | 0.491954 |
matA | c0405 | Hypothetical protein ykgK | chromosome | CDS | 385866 | 591 | - | 0.397631 |
melR | c5123 | Melibiose operon Regulatory protein | chromosome | CDS | 4899267 | 909 | - | 0.50275 |
metJ | c4891 | transcriptional repressor protein MetJ | chromosome | CDS | 4647648 | 456 | - | 0.5 |
metR | c4750 | Transcriptional activator protein metR | chromosome | CDS | 4516282 | 954 | - | 0.557652 |
mfd | c1389 | Transcription-repair coupling factor | chromosome | CDS | 1315400 | 2856 | - | 0.545518 |
mlc | c1985 | Mlc protein | chromosome | CDS | 1828051 | 1221 | - | 0.520066 |
mtlR | c4418 | Mannitol operon repressor | chromosome | CDS | 4203245 | 588 | + | 0.5 |
nac | c2446 | Nitrogen assimilation Regulatory protein nac | chromosome | CDS | 2258888 | 948 | + | 0.488397 |
nagC | c0751 | N-acetylglucosamine repressor | chromosome | CDS | 733108 | 1221 | - | 0.528256 |
narL | c1681 | Nitrate/nitrite response regulator protein narL | chromosome | CDS | 1513979 | 717 | - | 0.514644 |
narP | c2730 | Nitrate/nitrite response regulator protein narP | chromosome | CDS | 2578154 | 678 | + | 0.514749 |
nhaR | c0025 | Transcriptional activator protein nhaR | chromosome | CDS | 22058 | 924 | + | 0.472944 |
nlp | c3946 | Sugar fermentation stimulation protein B | chromosome | CDS | 3768402 | 279 | + | 0.498208 |
nrfB | c5067 | Cytochrome c-type protein nrfB precursor | chromosome | CDS | 4842523 | 573 | + | 0.541012 |
nusA | c3926 | transcription elongation factor NusA | chromosome | CDS | 3749672 | 1488 | - | 0.525538 |
nusB | c0527 | transcription antitermination protein NusB | chromosome | CDS | 509190 | 420 | + | 0.542857 |
nusG | c4937 | transcription antitermination protein NusG | chromosome | CDS | 4709991 | 546 | + | 0.512821 |
ompR | c4181 | osmolarity response regulator | chromosome | CDS | 3962730 | 720 | - | 0.55 |
oprR | c1938 | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 1780528 | 948 | + | 0.490506 |
oxyR | c4922 | Hydrogen peroxide-inducible genes activator | chromosome | CDS | 4688221 | 963 | + | 0.553479 |
papI | c3593 | PapI protein | chromosome | CDS | 3438457 | 234 | + | 0.470085 |
papI_2 | c5189 | PapI protein | chromosome | CDS | 4949723 | 222 | + | 0.477477 |
papX | c3582 | PapX protein | chromosome | CDS | 3428779 | 552 | - | 0.380435 |
pdhR | c0140 | transcriptional regulator of pyruvate dehydrogenase complex | chromosome | CDS | 132406 | 798 | + | 0.551378 |
phnF | c5108 | Probable transcriptional regulator phnF | chromosome | CDS | 4880737 | 735 | - | 0.616327 |
phnO | c5099 | PhnO protein | chromosome | CDS | 4874144 | 435 | - | 0.572414 |
phoB | c0508 | Phosphate regulon transcriptional Regulatory protein phoB | chromosome | CDS | 491208 | 690 | + | 0.543478 |
phoP | c1509 | Transcriptional Regulatory protein phoP | chromosome | CDS | 1390669 | 672 | - | 0.47619 |
prpR | c0450 | Propionate catabolism operon Regulatory protein | chromosome | CDS | 436509 | 1587 | - | 0.551985 |
pspA | c1774 | Phage shock protein A | chromosome | CDS | 1610758 | 669 | + | 0.493274 |
pspC | c1777 | Phage shock protein C | chromosome | CDS | 1611704 | 360 | + | 0.494444 |
pspF | c1773 | Psp operon transcriptional activator | chromosome | CDS | 1609615 | 993 | - | 0.517623 |
purR | c2052 | Purine nucleotide synthesis repressor | chromosome | CDS | 1893982 | 1026 | + | 0.533138 |
rbsR | c4681 | Ribose operon repressor | chromosome | CDS | 4439260 | 993 | + | 0.498489 |
rcsA | c2369 | Colanic acid capsular biosynthesis activation protein A | chromosome | CDS | 2175737 | 624 | + | 0.384615 |
rcsB | c2760 | Capsular synthesis regulator component B | chromosome | CDS | 2603099 | 696 | + | 0.469828 |
recG | c4477 | ATP-dependent DNA helicase recG | chromosome | CDS | 4256179 | 2115 | + | 0.569267 |
relA | c3347 | GTP pyrophosphokinase | chromosome | CDS | 3186235 | 2235 | - | 0.536913 |
rfaH | c4789 | transcriptional activator RfaH | chromosome | CDS | 4550185 | 489 | - | 0.492843 |
rfaP | c4454 | Lipopolysaccharide core biosynthesis protein rfaP | chromosome | CDS | 4236156 | 807 | - | 0.478315 |
rhaR | c4856 | L-rhamnose operon transcriptional activator rhaR | chromosome | CDS | 4618192 | 960 | + | 0.496875 |
rhaS | c4855 | L-rhamnose operon Regulatory protein rhaS | chromosome | CDS | 4617393 | 837 | + | 0.51135 |
rhlB | c4700 | ATP-dependent RNA helicase | chromosome | CDS | 4464529 | 1266 | - | 0.522117 |
rhlE | c0880 | Putative ATP-dependent RNA helicase rhlE | chromosome | CDS | 853494 | 1362 | + | 0.563142 |
rho | c4702 | transcription termination factor Rho | chromosome | CDS | 4466509 | 1332 | + | 0.501502 |
rnb | c1757 | exoribonuclease II | chromosome | CDS | 1591268 | 1935 | - | 0.531266 |
rncS | c3091 | ribonuclease III | chromosome | CDS | 2966250 | 681 | - | 0.503671 |
rnk | c0698 | nucleoside diphosphate kinase regulator | chromosome | CDS | 684149 | 411 | - | 0.549878 |
rob | c5483 | Right origin-binding protein | chromosome | CDS | 5224217 | 870 | - | 0.522988 |
rpiR | c5095 | Protein rpiR | chromosome | CDS | 4871260 | 924 | - | 0.480519 |
rpoA | c4056 | DNA-directed RNA polymerase alpha subunit | chromosome | CDS | 3871416 | 990 | - | 0.522222 |
rpoB | c4944 | DNA-directed RNA polymerase beta subunit | chromosome | CDS | 4713339 | 4062 | + | 0.525357 |
rpoC | c4945 | DNA-directed RNA polymerase beta' subunit | chromosome | CDS | 4717477 | 4224 | + | 0.537169 |
rpoD | c3821 | RpoD protein | chromosome | CDS | 3654744 | 741 | + | 0.541161 |
rpoE | c3097 | RNA polymerase sigma-70 factor | chromosome | CDS | 2972304 | 609 | - | 0.487685 |
rpoH | c4254 | RNA polymerase sigma factor | chromosome | CDS | 4038422 | 855 | - | 0.534503 |
rpoN | c3962 | DNA-directed RNA polymerase subunit N | chromosome | CDS | 3778210 | 1434 | + | 0.528591 |
rpoZ | c4474 | DNA-directed RNA polymerase omega subunit | chromosome | CDS | 4253108 | 276 | + | 0.532609 |
rstA | c2000 | Transcriptional Regulatory protein rstA | chromosome | CDS | 1842794 | 780 | + | 0.483333 |
rtcR | c4199 | Transcriptional Regulatory protein rtcR | chromosome | CDS | 3984892 | 1599 | + | 0.551595 |
sdiA | c2330 | Regulatory protein sdiA | chromosome | CDS | 2144786 | 735 | - | 0.459864 |
sfaC | c1237 | Putative F1C and S fimbrial switch Regulatory protein | chromosome | CDS | 1186872 | 285 | - | 0.438596 |
slmA | c4465 | nucleoid occlusion protein | chromosome | CDS | 4245450 | 639 | + | 0.522692 |
slyA | c2034 | transcriptional regulator SlyA | chromosome | CDS | 1880919 | 441 | - | 0.473923 |
sohA | c3884 | HtrA suppressor protein | chromosome | CDS | 3714321 | 336 | + | 0.47619 |
soxR | c5054 | Redox-sensitive transcriptional activator soxR | chromosome | CDS | 4830028 | 465 | + | 0.511828 |
soxS | c5053 | Regulatory protein soxS | chromosome | CDS | 4829619 | 324 | - | 0.515432 |
spoT | c4475 | Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase | chromosome | CDS | 4253402 | 2109 | + | 0.538644 |
srlR | c3261 | Glucitol operon repressor | chromosome | CDS | 3111517 | 774 | + | 0.485788 |
srmB | c3100 | ATP-dependent RNA helicase srmB | chromosome | CDS | 2975763 | 1335 | + | 0.546816 |
tdcA | c3876 | Tdc operon transcriptional activator | chromosome | CDS | 3705507 | 939 | - | 0.42279 |
torR | c1131 | TorCAD operon transcriptional Regulatory protein torR | chromosome | CDS | 1092002 | 693 | - | 0.535354 |
treR | c5340 | trehalose repressor | chromosome | CDS | 5083373 | 948 | - | 0.544304 |
trpR | c5480 | Trp operon repressor | chromosome | CDS | 5222595 | 327 | + | 0.538226 |
tyrR | c1795 | Transcriptional Regulatory protein tyrR | chromosome | CDS | 1629314 | 1569 | + | 0.519439 |
uhpA | c4593 | Transcriptional Regulatory protein uhpA | chromosome | CDS | 4354931 | 591 | - | 0.58714 |
uidR | c2010 | Uid operon repressor | chromosome | CDS | 1856975 | 591 | - | 0.505922 |
umuD | c1631 | UmuD protein | chromosome | CDS | 1468083 | 420 | + | 0.480952 |
uvrY | c2327 | response regulator | chromosome | CDS | 2143379 | 657 | - | 0.496195 |
uxuR | c5404 | Uxu operon transcriptional regulator | chromosome | CDS | 5149305 | 774 | + | 0.542636 |
vacB | c5263 | Ribonuclease R | chromosome | CDS | 5014772 | 2484 | + | 0.550725 |
xapR | c2937 | Xanthosine operon Regulatory protein | chromosome | CDS | 2802472 | 900 | - | 0.507778 |
xylR | c4389 | Xylose operon Regulatory protein | chromosome | CDS | 4172612 | 1179 | + | 0.485157 |
yaeG | c0199 | Carbohydrate diacid regulator | chromosome | CDS | 193495 | 1176 | + | 0.527211 |
yaeO | c0227 | Rof protein | chromosome | CDS | 223712 | 261 | - | 0.490421 |
yafC | c0245 | Hypothetical transcriptional regulator yafC | chromosome | CDS | 241368 | 915 | - | 0.491803 |
yafP | c0380 | Hypothetical acetyltransferase yafP | chromosome | CDS | 359938 | 453 | + | 0.439294 |
yahB | c0436 | Hypothetical transcriptional regulator yahB | chromosome | CDS | 423994 | 933 | - | 0.499464 |
yaiV | c0479 | Hypothetical protein yaiV | chromosome | CDS | 468506 | 669 | + | 0.402093 |
ybaD | c0523 | hypothetical protein | chromosome | CDS | 507055 | 450 | + | 0.511111 |
ybaO | c0564 | Hypothetical transcriptional regulator ybaO | chromosome | CDS | 542925 | 567 | + | 0.483245 |
ybbI | c0607 | Transcriptional regulator cueR | chromosome | CDS | 588611 | 408 | + | 0.558824 |
ybbS | c0619 | Hypothetical transcriptional regulator ybbS | chromosome | CDS | 600096 | 927 | - | 0.522114 |
ybbU | c0621 | Negative regulator of allantoin and glyoxylate utilization operons | chromosome | CDS | 601812 | 816 | + | 0.533088 |
ybcM | c2349 | Hypothetical transcriptional regulator ybcM | chromosome | CDS | 2162264 | 798 | - | 0.370927 |
ybdO | c0691 | Hypothetical transcriptional regulator ybdO | chromosome | CDS | 678719 | 939 | - | 0.371672 |
ybhD | c0845 | Hypothetical transcriptional regulator ybhD | chromosome | CDS | 821200 | 1017 | - | 0.444444 |
ybiH | c0879 | Hypothetical transcriptional regulator ybiH | chromosome | CDS | 852594 | 684 | - | 0.527778 |
yccR | c1096 | Hypothetical protein yccR | chromosome | CDS | 1064926 | 630 | + | 0.477778 |
ycdC | c1150 | Hypothetical transcriptional regulator ycdC | chromosome | CDS | 1107710 | 666 | + | 0.512012 |
ycdI | c1847 | Hypothetical transcriptional regulator ydcI | chromosome | CDS | 1686634 | 1065 | - | 0.479812 |
ycfQ | c1385 | Hypothetical transcriptional regulator ycfQ | chromosome | CDS | 1312428 | 711 | - | 0.506329 |
ycfX | c1394 | Hypothetical protein ycfX | chromosome | CDS | 1322820 | 912 | + | 0.523026 |
ycgE | c1604 | Hypothetical transcriptional regulator ycgE | chromosome | CDS | 1453118 | 732 | - | 0.484973 |
yciT | c1754 | Hypothetical transcriptional regulator yciT | chromosome | CDS | 1587890 | 750 | - | 0.494667 |
ycjW | c1792 | Hypothetical transcriptional regulator ycjW | chromosome | CDS | 1625584 | 999 | - | 0.455455 |
ydcN | c1858 | Hypothetical protein ydcN | chromosome | CDS | 1696911 | 537 | + | 0.495345 |
ydcR | c1863 | Hypothetical protein ydcR | chromosome | CDS | 1700297 | 1407 | + | 0.509595 |
ydeO | c1928 | Hypothetical transcriptional regulator ydeO | chromosome | CDS | 1768598 | 762 | - | 0.392388 |
ydfH | c1966 | Hypothetical transcriptional regulator ydfH | chromosome | CDS | 1809527 | 687 | + | 0.508006 |
ydhB | c2053 | Hypothetical transcriptional regulator ydhB | chromosome | CDS | 1895004 | 933 | - | 0.535906 |
ydhM | c2042 | Hypothetical transcriptional regulator ydhM | chromosome | CDS | 1886552 | 600 | + | 0.525 |
ydiP | c2091 | Hypothetical transcriptional regulator ydiP | chromosome | CDS | 1934359 | 912 | - | 0.427632 |
ydiZ | c2123 | Hypothetical protein ydiZ | chromosome | CDS | 1962496 | 291 | + | 0.439863 |
ydjF | c2174 | Hypothetical transcriptional regulator ydjF | chromosome | CDS | 2011326 | 759 | - | 0.422925 |
yeaM | c2195 | Hypothetical transcriptional regulator yeaM | chromosome | CDS | 2031988 | 822 | - | 0.501217 |
yebK | c2267 | Hex regulon repressor | chromosome | CDS | 2088329 | 870 | + | 0.491954 |
yedW | c2387 | Probable transcriptional Regulatory protein yedW | chromosome | CDS | 2189790 | 783 | - | 0.429119 |
yeeY | c2542 | Hypothetical transcriptional regulator yeeY | chromosome | CDS | 2375386 | 951 | - | 0.508938 |
yegW | c2628 | Hypothetical transcriptional regulator yegW | chromosome | CDS | 2472707 | 747 | - | 0.52075 |
yehT | c2655 | Hypothetical protein yehT | chromosome | CDS | 2503950 | 735 | - | 0.502041 |
yehV | c2657 | MerR-like regulator A | chromosome | CDS | 2506573 | 732 | + | 0.530055 |
yeiE | c2692 | Hypothetical transcriptional regulator yeiE | chromosome | CDS | 2540430 | 882 | - | 0.536281 |
yejH | c2721 | Hypothetical protein yejH | chromosome | CDS | 2571169 | 1761 | + | 0.533788 |
yfaX | c2790 | Hypothetical transcriptional regulator yfaX | chromosome | CDS | 2647811 | 783 | - | 0.503193 |
yfeD | c2935 | Hypothetical protein yfeD | chromosome | CDS | 2799848 | 393 | + | 0.463104 |
yfeG | c2971 | Ethanolamine operon Regulatory protein | chromosome | CDS | 2831678 | 1053 | - | 0.528965 |
yfeR | c2942 | Hypothetical transcriptional regulator yfeR | chromosome | CDS | 2806809 | 927 | - | 0.542611 |
yfhH | c3085 | Hypothetical protein yfhH | chromosome | CDS | 2961554 | 921 | + | 0.509229 |
yfhP | c3057 | Hypothetical protein yfhP | chromosome | CDS | 2929824 | 489 | - | 0.537832 |
yfiE | c3101 | Hypothetical transcriptional regulator yfiE | chromosome | CDS | 2977130 | 927 | - | 0.485437 |
ygaA | c3263 | anaerobic nitric oxide reductase transcription regulator | chromosome | CDS | 3113245 | 1590 | - | 0.554717 |
ygaE | c3212 | Hypothetical transcriptional regulator ygaE | chromosome | CDS | 3074327 | 681 | + | 0.53304 |
ygaV | c3216 | Hypothetical transcriptional regulator ygaV | chromosome | CDS | 3075882 | 300 | + | 0.52 |
ygbI | c3296 | Hypothetical transcriptional regulator ygbI | chromosome | CDS | 3141624 | 798 | - | 0.517544 |
ygeV | c3447 | Hypothetical sigma-54-dependent transcriptional regulator ygeV | chromosome | CDS | 3300449 | 1779 | - | 0.459247 |
ygfI | c3499 | Hypothetical transcriptional regulator ygfI | chromosome | CDS | 3357853 | 897 | - | 0.444816 |
yggD | c3512 | Hypothetical protein yggD | chromosome | CDS | 3369221 | 510 | - | 0.488235 |
ygiP | c3810 | Hypothetical transcriptional regulator ygiP | chromosome | CDS | 3645918 | 981 | - | 0.490316 |
ygiX | c3764 | Transcriptional Regulatory protein qseB | chromosome | CDS | 3598236 | 660 | + | 0.522727 |
yhaJ | c3863 | Hypothetical transcriptional regulator yhaJ | chromosome | CDS | 3692693 | 897 | - | 0.561873 |
yhcK | c3980 | transcriptional regulator NanR | chromosome | CDS | 3798860 | 792 | - | 0.535354 |
yhcO | c3994 | Hypothetical protein yhcO | chromosome | CDS | 3809336 | 273 | - | 0.424908 |
yhcS | c3998 | Hypothetical transcriptional regulator yhcS | chromosome | CDS | 3812999 | 930 | + | 0.521505 |
yhgF | c4184 | Protein yhgF | chromosome | CDS | 3964250 | 2322 | + | 0.565461 |
yhhG | c4274 | nickel responsive regulator | chromosome | CDS | 4057243 | 402 | + | 0.542289 |
yhiE | c4323 | Hypothetical protein yhiE | chromosome | CDS | 4097033 | 606 | + | 0.343234 |
yhiF | c4306 | Hypothetical transcriptional regulator yhiF | chromosome | CDS | 4084409 | 531 | + | 0.397363 |
yhiW | c4326 | Hypothetical transcriptional regulator yhiW | chromosome | CDS | 4102635 | 729 | - | 0.410151 |
yhiX | c4327 | Transcriptional regulator gadX | chromosome | CDS | 4103732 | 825 | - | 0.410909 |
yhjB | c4331 | Hypothetical transcriptional regulator yhjB | chromosome | CDS | 4110037 | 603 | - | 0.474295 |
yhjC | c4332 | Hypothetical transcriptional regulator yhjC | chromosome | CDS | 4111087 | 972 | + | 0.51749 |
yiaC | c4368 | Hypothetical acetyltransferase yiaC | chromosome | CDS | 4152689 | 441 | + | 0.521542 |
yiaJ | c4395 | Hypothetical transcriptional regulator yiaJ | chromosome | CDS | 4179230 | 849 | - | 0.518257 |
yidL | c4603 | Hypothetical transcriptional regulator yidL | chromosome | CDS | 4365361 | 897 | + | 0.434783 |
yidZ | c4634 | Hypothetical transcriptional regulator yidZ | chromosome | CDS | 4394493 | 969 | + | 0.524252 |
yieP | c4683 | Hypothetical transcriptional regulator yieP | chromosome | CDS | 4441668 | 693 | - | 0.493506 |
yifA | c4685 | transcriptional regulator HdfR | chromosome | CDS | 4448165 | 840 | - | 0.479762 |
yihL | c4821 | Hypothetical transcriptional regulator yihL | chromosome | CDS | 4585831 | 711 | + | 0.485232 |
yihW | c4824 | Hypothetical transcriptional regulator yihW | chromosome | CDS | 4588956 | 789 | - | 0.498099 |
yiiD | c4835 | Hypothetical protein yiiD | chromosome | CDS | 4599551 | 990 | + | 0.543434 |
yiiE | c4840 | Hypothetical protein yiiE | chromosome | CDS | 4603350 | 246 | + | 0.46748 |
yijC | c4926 | Hypothetical protein yijC | chromosome | CDS | 4693471 | 705 | + | 0.526241 |
yijO | c4913 | Hypothetical transcriptional regulator yijO | chromosome | CDS | 4674479 | 852 | - | 0.53169 |
yjaB | c4969 | Hypothetical acetyltransferase yjaB | chromosome | CDS | 4744867 | 444 | - | 0.536036 |
yjaE | c4952 | Regulator of sigma D | chromosome | CDS | 4727539 | 477 | - | 0.48218 |
yjcT | c5090 | D-allose kinase | chromosome | CDS | 4866029 | 930 | - | 0.53871 |
yjdC | c5217 | Protein yjdC | chromosome | CDS | 4971767 | 600 | - | 0.535 |
yjdG | c5130 | Transcriptional Regulatory protein dcuR | chromosome | CDS | 4906210 | 720 | - | 0.493056 |
yjeB | c5262 | Hypothetical protein yjeB | chromosome | CDS | 5014350 | 426 | + | 0.483568 |
yjfJ | c5266 | Hypothetical protein yjfJ precursor | chromosome | CDS | 5018624 | 699 | + | 0.509299 |
yjfQ | c5279 | Hypothetical transcriptional regulator yjfQ | chromosome | CDS | 5025766 | 756 | - | 0.507937 |
yjiE | c5407 | Hypothetical transcriptional regulator yjiE | chromosome | CDS | 5151301 | 990 | - | 0.508081 |
yjjM | c5436 | Hypothetical protein yjjM | chromosome | CDS | 5183931 | 906 | - | 0.472406 |
yjjQ | c5444 | Hypothetical protein yjjQ | chromosome | CDS | 5192466 | 726 | + | 0.451791 |
ykgA | c0416 | Hypothetical transcriptional regulator ykgA | chromosome | CDS | 400086 | 891 | - | 0.430976 |
ykgD | c0421 | Hypothetical transcriptional regulator ykgD | chromosome | CDS | 404671 | 906 | + | 0.498896 |
yneJ | c1949 | Hypothetical transcriptional regulator yneJ | chromosome | CDS | 1791712 | 882 | + | 0.535147 |
ynfL | c1986 | Hypothetical transcriptional regulator ynfL | chromosome | CDS | 1829406 | 894 | - | 0.521253 |
ypdB | c2920 | Hypothetical protein ypdB | chromosome | CDS | 2782748 | 756 | + | 0.474868 |
ypdC | c2921 | Hypothetical transcriptional regulator ypdC | chromosome | CDS | 2783516 | 858 | + | 0.519814 |
yphH | c3072 | Hypothetical protein yphH | chromosome | CDS | 2945838 | 1200 | + | 0.513333 |
yqfE | c3496 | Hypothetical protein yqfE | chromosome | CDS | 3355334 | 279 | - | 0.544803 |
yqgE | c3534 | hypothetical protein | chromosome | CDS | 3388820 | 636 | + | 0.509434 |
yqhC | c3744 | Hypothetical transcriptional regulator yqhC | chromosome | CDS | 3575906 | 1128 | - | 0.500886 |
yqjI | c3824 | Hypothetical protein yqjI | chromosome | CDS | 3657374 | 624 | + | 0.535256 |
yrbA | c3948 | Protein yrbA | chromosome | CDS | 3770042 | 270 | - | 0.503704 |
ytfH | c5311 | Hypothetical protein ytfH | chromosome | CDS | 5051120 | 492 | + | 0.514228 |
zntR | c4053 | zinc-responsive transcriptional regulator | chromosome | CDS | 3870081 | 426 | - | 0.495305 |