Gene list
Applied filters:
COG category: Transcription
Organism: Yersinia pestis KIM, KIM
Number of genes found: 252
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis KIM, KIM | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | y2012 | hypothetical protein | chromosome | CDS | 2218967 | 324 | + | 0.459877 |
NA | y3192 | hypothetical protein | chromosome | CDS | 3514207 | 705 | - | 0.334752 |
NA | y4049 | hypothetical protein | chromosome | CDS | 4490014 | 363 | + | 0.438017 |
NA | y2009 | transcriptional regulator | chromosome | CDS | 2212310 | 957 | + | 0.53187 |
NA | y1503 | transcriptional regulator | chromosome | CDS | 1667069 | 879 | - | 0.514221 |
NA | y1691 | transcriptional regulator LYSR-type | chromosome | CDS | 1865262 | 942 | - | 0.522293 |
NA | y1807 | hypothetical protein | chromosome | CDS | 1987958 | 573 | + | 0.464223 |
NA | y3442 | hypothetical protein | chromosome | CDS | 3829126 | 1047 | + | 0.452722 |
NA | y0931 | hypothetical protein | chromosome | CDS | 1046393 | 846 | + | 0.521277 |
NA | y0181 | transcriptional regulator | chromosome | CDS | 185744 | 876 | + | 0.343607 |
NA | y0492 | transcriptional regulator | chromosome | CDS | 555489 | 510 | - | 0.44902 |
NA | y0180 | transcriptional regulator LYSR-type | chromosome | CDS | 184581 | 912 | + | 0.47807 |
NA | y1038 | LRP-like transcriptional regulator | chromosome | CDS | 1170276 | 462 | + | 0.469697 |
NA | y3510 | transcriptional regulator LYSR-type | chromosome | CDS | 3892686 | 912 | - | 0.530702 |
NA | y2933 | regulator | chromosome | CDS | 3236486 | 741 | - | 0.376518 |
NA | y3913 | hypothetical protein | chromosome | CDS | 4368216 | 2376 | - | 0.541667 |
NA | y0053 | transcriptional regulator | chromosome | CDS | 65442 | 1296 | - | 0.492284 |
NA | y0536 | hypothetical protein | chromosome | CDS | 602229 | 987 | - | 0.383992 |
NA | y1123 | transcriptional regulator LYSR-type | chromosome | CDS | 1260736 | 894 | + | 0.495526 |
NA | y0322 | hypothetical protein | chromosome | CDS | 350003 | 648 | + | 0.513889 |
NA | y2239 | enzyme | chromosome | CDS | 2467147 | 1905 | - | 0.506562 |
NA | y1741 | hypothetical protein | chromosome | CDS | 1922705 | 642 | - | 0.376947 |
NA | y3089 | hypothetical protein | chromosome | CDS | 3399434 | 321 | - | 0.461059 |
NA | y0474 | acetyltransferase | chromosome | CDS | 531243 | 585 | - | 0.437607 |
NA | y0390 | transcriptional regulator | chromosome | CDS | 435754 | 687 | - | 0.491994 |
NA | y0512 | response regulator/transcription activator | chromosome | CDS | 581872 | 633 | - | 0.450237 |
NA | y2919 | ATP-dependent helicase | chromosome | CDS | 3224718 | 1758 | + | 0.525597 |
NA | y0902 | hypothetical protein | chromosome | CDS | 1010428 | 774 | - | 0.44832 |
NA | y1813 | regulator | chromosome | CDS | 1992186 | 450 | - | 0.44 |
NA | y1094 | transcriptional regulator | chromosome | CDS | 1234482 | 420 | + | 0.464286 |
NA | y1959 | hypothetical protein | chromosome | CDS | 2158886 | 600 | - | 0.503333 |
NA | y0113 | transcriptional regulator LYSR-type | chromosome | CDS | 123122 | 894 | - | 0.527964 |
NA | y0011 | hypothetical protein | chromosome | CDS | 10766 | 690 | - | 0.44058 |
NA | y3781 | AraC-type regulatory protein | chromosome | CDS | 4201370 | 876 | - | 0.400685 |
NA | y1304 | hypothetical protein | chromosome | CDS | 1446332 | 840 | - | 0.492857 |
NA | y0260 | transcriptional repressor | chromosome | CDS | 277204 | 489 | + | 0.433538 |
NA | y3949 | transcriptional regulator | chromosome | CDS | 4406136 | 987 | - | 0.513678 |
NA | y2084 | hypothetical protein | chromosome | CDS | 2295546 | 894 | + | 0.432886 |
NA | y0009 | hypothetical protein | chromosome | CDS | 9062 | 204 | + | 0.514706 |
NA | y2950 | DEOR-type transcriptional regulator | chromosome | CDS | 3250293 | 816 | - | 0.482843 |
NA | y2733 | hypothetical protein | chromosome | CDS | 3017713 | 723 | - | 0.430152 |
NA | y3249 | hypothetical protein | chromosome | CDS | 3582062 | 681 | + | 0.511013 |
NA | y1528 | hypothetical protein | chromosome | CDS | 1691686 | 603 | + | 0.351575 |
NA | y3547 | transcriptional regulators | chromosome | CDS | 3928806 | 933 | - | 0.554127 |
NA | Y1092 | hypothetical protein | pMT-1 | CDS | 70730 | 2010 | + | 0.61393 |
NA | y0669 | regulator for maltose metabolism | chromosome | CDS | 754397 | 276 | - | 0.496377 |
NA | y0598 | hypothetical protein | chromosome | CDS | 675124 | 591 | - | 0.497462 |
NA | y3587 | hypothetical protein | chromosome | CDS | 3978526 | 1500 | + | 0.49 |
NA | y0975 | transcriptional regulator | chromosome | CDS | 1100648 | 915 | + | 0.502732 |
NA | y4092 | hypothetical protein | chromosome | CDS | 4541897 | 456 | + | 0.519737 |
NA | y1619 | transcriptional regulator | chromosome | CDS | 1787503 | 1137 | + | 0.485488 |
NA | y0332 | transcriptional regulator HdfR | chromosome | CDS | 366872 | 882 | - | 0.475057 |
NA | y2171 | regulator | chromosome | CDS | 2400117 | 933 | - | 0.530547 |
NA | y0742 | hypothetical protein | chromosome | CDS | 826689 | 504 | - | 0.513889 |
NA | y1472 | response regulator | chromosome | CDS | 1631521 | 708 | - | 0.514124 |
NA | y0250 | AraC-like regulator | chromosome | CDS | 265407 | 942 | - | 0.461783 |
NA | y2350 | multi modular; transcriptional regulator; also ATP-binding component of a transport system | chromosome | CDS | 2589041 | 1449 | - | 0.509317 |
NA | y2382 | transcriptional regulator LYSR-type | chromosome | CDS | 2629576 | 897 | - | 0.508361 |
NA | y1140 | regulator | chromosome | CDS | 1280540 | 303 | + | 0.481848 |
NA | y0216 | transcriptional regulator | chromosome | CDS | 231438 | 726 | - | 0.506887 |
NA | y0878 | transcriptional regulator | chromosome | CDS | 986875 | 945 | - | 0.478307 |
NA | y0141 | hypothetical protein | chromosome | CDS | 153441 | 264 | - | 0.44697 |
NA | y2666 | transcriptional regulator LYSR-type | chromosome | CDS | 2940431 | 870 | + | 0.53908 |
NA | y1164 | regulatory protein | chromosome | CDS | 1311511 | 618 | + | 0.357605 |
NA | y1995 | hypothetical protein | chromosome | CDS | 2196053 | 840 | - | 0.372619 |
NA | y0843 | transcriptional regulator | chromosome | CDS | 942813 | 999 | - | 0.502503 |
NA | y2109 | transcriptional regulator LYSR-type | chromosome | CDS | 2325696 | 924 | + | 0.453463 |
NA | y1789 | hypothetical protein | chromosome | CDS | 1969711 | 168 | + | 0.517857 |
NA | y2954 | phage repressor protein cI | chromosome | CDS | 3254082 | 723 | + | 0.477178 |
NA | y0636 | hypothetical protein | chromosome | CDS | 719590 | 477 | + | 0.444444 |
NA | y4095 | hypothetical protein | chromosome | CDS | 4543500 | 645 | - | 0.534884 |
NA | y2469 | AraC-type regulatory protein | chromosome | CDS | 2732943 | 879 | + | 0.433447 |
NA | y3322 | hypothetical protein | chromosome | CDS | 3656247 | 666 | + | 0.462462 |
NA | y0173 | hypothetical protein | chromosome | CDS | 178486 | 282 | - | 0.453901 |
NA | y1650 | LACI-type transcriptional regulator | chromosome | CDS | 1823261 | 993 | + | 0.470292 |
NA | y2245 | hypothetical protein | chromosome | CDS | 2473696 | 1026 | + | 0.461014 |
NA | Y1024.S | hypothetical protein | pMT-1 | CDS | 16895 | 669 | + | 0.559043 |
NA | y1949 | transcriptional regulator LYSR-type | chromosome | CDS | 2151178 | 933 | + | 0.501608 |
NA | y1803 | sucrose specific transcriptional regulator | chromosome | CDS | 1982931 | 1044 | - | 0.491379 |
NA | y3187 | transcriptional regulator | chromosome | CDS | 3509327 | 909 | - | 0.49945 |
NA | y3766 | hypothetical protein | chromosome | CDS | 4188851 | 150 | - | 0.486667 |
NA | y0517 | type III secretion system component | chromosome | CDS | 588706 | 621 | + | 0.417069 |
NA | Y1023 | hypothetical protein | pMT-1 | CDS | 16197 | 699 | + | 0.527897 |
NA | y0549 | hypothetical protein | chromosome | CDS | 616262 | 489 | - | 0.476483 |
NA | y2377 | LysR-type transcriptional regulator | chromosome | CDS | 2624985 | 963 | - | 0.505711 |
NA | y1389 | transcriptional regulator | chromosome | CDS | 1542521 | 1506 | - | 0.545153 |
NA | y1690 | transcriptional regulator | chromosome | CDS | 1864011 | 1005 | - | 0.404975 |
NA | y1711 | lacI-family transcriptional regulator | chromosome | CDS | 1891009 | 1041 | - | 0.464938 |
NA | y3260 | hypothetical protein | chromosome | CDS | 3594045 | 201 | + | 0.41791 |
NA | y3851 | hypothetical protein | chromosome | CDS | 4288430 | 1128 | - | 0.472518 |
NA | y3231 | hypothetical protein | chromosome | CDS | 3557149 | 1083 | - | 0.481071 |
NA | y3266 | hypothetical protein | chromosome | CDS | 3597721 | 399 | - | 0.45614 |
NA | y1788 | NAGC-like transcriptional regulator | chromosome | CDS | 1968945 | 789 | + | 0.504436 |
NA | y2152 | hypothetical protein | chromosome | CDS | 2379948 | 861 | - | 0.291521 |
NA | y2215 | phage endopeptidase Rz | chromosome | CDS | 2447222 | 459 | - | 0.507625 |
NA | y1145 | hypothetical protein | chromosome | CDS | 1291754 | 855 | - | 0.559064 |
NA | y0699 | hypothetical protein | chromosome | CDS | 784104 | 312 | + | 0.455128 |
NA | y2373 | DEOR-type transcriptional regulator | chromosome | CDS | 2619352 | 771 | + | 0.500648 |
NA | y2570 | regulator | chromosome | CDS | 2831818 | 387 | + | 0.416021 |
NA | y2191 | phage antirepressor | chromosome | CDS | 2424950 | 1095 | - | 0.452055 |
NA | y1328 | hypothetical protein | chromosome | CDS | 1474331 | 1392 | - | 0.467672 |
NA | y1111 | hypothetical protein | chromosome | CDS | 1250301 | 498 | - | 0.435743 |
NA | y1596 | transcriptional regulator | chromosome | CDS | 1764852 | 786 | + | 0.489822 |
NA | y0109 | acetyltransferase | chromosome | CDS | 119050 | 924 | - | 0.50974 |
NA | y1464 | transcriptional regulator | chromosome | CDS | 1621458 | 879 | + | 0.49033 |
NA | y3567 | repressor | chromosome | CDS | 3948021 | 987 | - | 0.47923 |
NA | y1165 | cold-shock protein | chromosome | CDS | 1312428 | 492 | - | 0.361789 |
NA | y2218 | hypothetical protein | chromosome | CDS | 2449556 | 564 | - | 0.429078 |
NA | y3267 | hypothetical protein | chromosome | CDS | 3598579 | 372 | - | 0.438172 |
NA | y3708 | hypothetical protein | chromosome | CDS | 4122538 | 2448 | + | 0.35335 |
NA | y1679 | hypothetical protein | chromosome | CDS | 1853231 | 498 | - | 0.522088 |
NA | y3115 | hypothetical protein | chromosome | CDS | 3426430 | 261 | + | 0.494253 |
NA | y2339 | repressor | chromosome | CDS | 2575123 | 768 | + | 0.509115 |
NA | y3498 | AraC-type regulatory protein | chromosome | CDS | 3880470 | 894 | - | 0.485459 |
NA | y1461 | N-acetylmannosamine kinase | chromosome | CDS | 1619845 | 873 | + | 0.565865 |
NA | y2877 | transcriptional regulator LYSR-type | chromosome | CDS | 3177250 | 873 | - | 0.507446 |
NA | y2498 | transcriptional regulator | chromosome | CDS | 2760552 | 1002 | + | 0.500998 |
NA | y2276 | transcriptional regulator | chromosome | CDS | 2512443 | 1155 | - | 0.550649 |
NA | y2375 | aminotransferase | chromosome | CDS | 2622569 | 1188 | - | 0.472222 |
NA | y3765 | transcriptional regulator, sorC family | chromosome | CDS | 4188088 | 681 | - | 0.531571 |
NA | y0999 | hypothetical protein | chromosome | CDS | 1128812 | 450 | + | 0.48 |
NA | y1876 | regulator | chromosome | CDS | 2072897 | 792 | + | 0.441919 |
NA | y2419 | transcriptional regulator of the GntR family | chromosome | CDS | 2688028 | 798 | - | 0.546366 |
NA | y2307 | two-component transcriptional regulator | chromosome | CDS | 2542389 | 693 | + | 0.520923 |
NA | y0961 | LysR-type transcriptional regulatory protein | chromosome | CDS | 1085282 | 912 | + | 0.325658 |
NA | y1333 | hypothetical protein | chromosome | CDS | 1479438 | 558 | + | 0.503584 |
NA | y2579 | transcriptional regulator | chromosome | CDS | 2839990 | 888 | - | 0.495495 |
NA | y0862 | transcriptional regulator | chromosome | CDS | 965773 | 810 | - | 0.427161 |
NA | Y1022 | hypothetical protein | pMT-1 | CDS | 14573 | 1560 | - | 0.514744 |
NA | y2457 | hypothetical protein | chromosome | CDS | 2722939 | 396 | + | 0.44697 |
NA | y0421 | hypothetical protein | chromosome | CDS | 469576 | 438 | - | 0.484018 |
NA | y1731 | hypothetical protein | chromosome | CDS | 1914859 | 981 | + | 0.50051 |
acrR | y1051 | acrAB operon repressor | chromosome | CDS | 1186922 | 657 | + | 0.432268 |
agaR | y3216 | DEOR-type transcriptional regulator of aga operon | chromosome | CDS | 3541399 | 777 | + | 0.478764 |
araC | y2100 | transcriptional regulator for ara operon | chromosome | CDS | 2314185 | 933 | + | 0.484459 |
arcA | y3721 | negative response regulator of genes in aerobic pathways, sensors, ArcB and CpxA | chromosome | CDS | 4136312 | 717 | + | 0.481172 |
argR | y0667 | arginine repressor | chromosome | CDS | 752091 | 471 | - | 0.452229 |
arsR | y0845 | transcriptional repressor of chromosomal ars operon | chromosome | CDS | 945713 | 342 | - | 0.48538 |
asnC | y0002 | transcriptional regulator | chromosome | CDS | 554 | 462 | - | 0.415584 |
baeR | y1381 | transcriptional response regulatory protein (sensor BaeS) | chromosome | CDS | 1529551 | 720 | - | 0.530556 |
basR | y0677 | transcriptional regulator | chromosome | CDS | 760525 | 663 | - | 0.493213 |
caf1R | Y1097 | F1 capsule positive regulator | pMT-1 | CDS | 77118 | 906 | - | 0.334437 |
celD | y1254 | negative transcriptional regulator of cel operon | chromosome | CDS | 1401240 | 843 | + | 0.409253 |
cobB | y1790 | NAD-dependent deacetylase | chromosome | CDS | 1969927 | 837 | + | 0.481481 |
cpxR | y0067 | two-component transcriptional regulator | chromosome | CDS | 77048 | 723 | + | 0.497925 |
cpxR | y1482 | two-component transcriptional regulator | chromosome | CDS | 1645753 | 684 | + | 0.475146 |
creB | y3280 | catabolic regulation response regulator | chromosome | CDS | 3611702 | 702 | - | 0.497151 |
cspE | y1166 | cold shock protein E | chromosome | CDS | 1313141 | 255 | + | 0.411765 |
cspE | y2774 | cold shock protein | chromosome | CDS | 3065525 | 234 | - | 0.440171 |
cspG | y1230 | homolog of Salmonella cold shock protein | chromosome | CDS | 1379286 | 243 | + | 0.386831 |
cspI | y0224 | cold shock-like protein | chromosome | CDS | 237921 | 288 | + | 0.440972 |
cspI | y0223 | cold shock-like protein | chromosome | CDS | 237428 | 309 | + | 0.436893 |
cysB | y2061 | transcriptional regulator for cysteine regulon | chromosome | CDS | 2270296 | 975 | + | 0.465641 |
cytR | y0297 | regulator for deo operon, udp, cdd, tsx, nupC, and nupG | chromosome | CDS | 315809 | 1029 | - | 0.48105 |
cytR | y3436 | transcription repressor | chromosome | CDS | 3823480 | 1020 | - | 0.453922 |
dbpA | y2531 | ATP-dependent RNA helicase | chromosome | CDS | 2792757 | 1383 | - | 0.501085 |
deaD | y0696 | inducible ATP-independent RNA helicase | chromosome | CDS | 781467 | 2010 | + | 0.535323 |
deoR | y2861 | transcriptional repressor for deo operon, tsx, nupG | chromosome | CDS | 3158635 | 765 | + | 0.448366 |
dinG | y2982 | probably ATP-dependent helicase | chromosome | CDS | 3288628 | 2181 | - | 0.492435 |
emrR | y0923 | regulator of plasmid mcrB operon (microcin B17 synthesis) | chromosome | CDS | 1040620 | 537 | - | 0.456238 |
exuR | y3602 | negative regulator of exu regulon, exuT, uxaAC, and uxuB | chromosome | CDS | 3999960 | 879 | + | 0.444824 |
fadR | y2177 | fatty acid metabolism regulator | chromosome | CDS | 2407095 | 720 | - | 0.4625 |
fimZ | y2386 | fimbrial Z protein; signal transducer | chromosome | CDS | 2634154 | 633 | + | 0.401264 |
fis | y0214 | DNA-binding protein Fis | chromosome | CDS | 229846 | 297 | + | 0.464646 |
flgM | y2513 | anti-FliA factor | chromosome | CDS | 2773415 | 303 | + | 0.475248 |
fliA | y2464 | flagellar biosynthesis sigma factor FliA | chromosome | CDS | 2727988 | 723 | - | 0.529737 |
fruR | y3637 | transcriptional repressor of fru operon and others | chromosome | CDS | 4032126 | 1011 | - | 0.531157 |
galR | y3183 | repressor of galETK operon | chromosome | CDS | 3504295 | 1092 | + | 0.515568 |
galR | y2113 | repressor of galETK operon | chromosome | CDS | 2330945 | 1017 | - | 0.493609 |
gcvA | y3154 | positive regulator of gcv operon | chromosome | CDS | 3465912 | 918 | - | 0.491285 |
glpR | y3897 | repressor of the glp operon | chromosome | CDS | 4351766 | 759 | - | 0.491436 |
gntR | y3873 | regulator of gluconate (gnt) operon | chromosome | CDS | 4315358 | 996 | + | 0.521084 |
greA | y0679 | transcription elongation factor GreA | chromosome | CDS | 762899 | 477 | + | 0.42348 |
greB | y3915 | transcription elongation factor GreB | chromosome | CDS | 4371125 | 516 | + | 0.492248 |
hepA | y3656 | ATP-dependent helicase HepA | chromosome | CDS | 4058750 | 2907 | + | 0.519436 |
hpaR | y2548 | regulator | chromosome | CDS | 2810221 | 477 | + | 0.448637 |
iciA | y3303 | chromosome replication initiation inhibitor protein | chromosome | CDS | 3635668 | 957 | + | 0.53187 |
iclR | y0019 | acetate operon repressor | chromosome | CDS | 24361 | 594 | - | 0.537037 |
ilvY | y0344 | positive regulator for ilvC | chromosome | CDS | 380665 | 885 | - | 0.527684 |
kdpE | y1261 | regulator of kdp operon (transcriptional effector) | chromosome | CDS | 1407563 | 630 | - | 0.504762 |
lacI | y3234 | transcriptional repressor of the lac operon | chromosome | CDS | 3562787 | 1149 | - | 0.482158 |
leuO | y3642 | leucine transcriptional activator | chromosome | CDS | 4039341 | 969 | - | 0.427245 |
lexA | y0572 | LexA repressor | chromosome | CDS | 647648 | 609 | + | 0.505747 |
lrhA | y1629 | NADH dehydrogenase transcriptional regulator, LysR family | chromosome | CDS | 1800209 | 933 | + | 0.468382 |
lrp | y2801 | regulator protein | chromosome | CDS | 3103442 | 495 | - | 0.442424 |
lysR | y3185 | positive regulator for lys | chromosome | CDS | 3506815 | 987 | + | 0.509625 |
malT | y3900 | transcriptional regulator MalT | chromosome | CDS | 4354117 | 2712 | - | 0.510693 |
metJ | y0301 | transcriptional repressor protein MetJ | chromosome | CDS | 321175 | 318 | - | 0.493711 |
metR | y0441 | regulator for metE and metH | chromosome | CDS | 490311 | 954 | - | 0.530398 |
mfd | y1784 | transcription-repair coupling factor | chromosome | CDS | 1962082 | 3447 | - | 0.51233 |
mlc | y2110 | NAGC-like transcriptional regulator | chromosome | CDS | 2326833 | 1218 | + | 0.46798 |
mtlR | y4085 | repressor for mtl | chromosome | CDS | 4532173 | 555 | - | 0.482883 |
nagC | y1200 | transcriptional repressor of nag (N-acetylglucosamine) operon | chromosome | CDS | 1346082 | 1266 | - | 0.49684 |
narP | y1441 | nitrate/nitrite response regulator | chromosome | CDS | 1598894 | 663 | - | 0.447964 |
nhaR | y3703 | transcriptional activator of nhaA | chromosome | CDS | 4115647 | 900 | - | 0.457778 |
nusA | y0687 | transcription elongation factor NusA | chromosome | CDS | 770412 | 1506 | + | 0.491368 |
nusB | y1002 | transcription antitermination protein NusB | chromosome | CDS | 1131147 | 417 | + | 0.477218 |
nusG | y0479 | transcription antitermination protein NusG | chromosome | CDS | 536562 | 546 | + | 0.487179 |
ompR | y3871 | transcriptional regulatory protein | chromosome | CDS | 4313033 | 738 | - | 0.50813 |
ompR | y3916 | osmolarity response regulator | chromosome | CDS | 4371776 | 720 | + | 0.522222 |
oxyR | y0320 | activator, hydrogen peroxide-inducible genes | chromosome | CDS | 347497 | 918 | + | 0.488017 |
parB | Y1077 | partitioning protein | pMT-1 | CDS | 63038 | 972 | + | 0.447531 |
pdhR | y0766 | transcriptional regulator of pyruvate dehydrogenase complex | chromosome | CDS | 854560 | 837 | + | 0.505376 |
phnF | y0730 | transcriptional regulator | chromosome | CDS | 814018 | 726 | - | 0.567493 |
phoB | y0978 | positive response regulator for pho regulon | chromosome | CDS | 1107191 | 720 | + | 0.484722 |
phoP | y1794 | transcriptional regulatory protein | chromosome | CDS | 1975226 | 672 | - | 0.479167 |
psaE | y2884 | regulator | chromosome | CDS | 3185985 | 645 | - | 0.376744 |
pspA | y1980 | phage shock protein A | chromosome | CDS | 2182084 | 666 | + | 0.48048 |
pspC | y1982 | phage shock protein | chromosome | CDS | 2183138 | 360 | + | 0.505556 |
pspF | y1979 | psp operon transcriptional activator | chromosome | CDS | 2180811 | 1044 | - | 0.511494 |
purR | y1950 | transcriptional repressor for pur regulon, glyA, glnB, prsA, speA | chromosome | CDS | 2152199 | 1026 | - | 0.500975 |
rcsB | y2970 | positive response regulator for colanic capsule biosynthesis | chromosome | CDS | 3270556 | 654 | + | 0.396024 |
recG | y0105 | DNA helicase | chromosome | CDS | 111774 | 2082 | + | 0.51633 |
relA | y0811 | (p)ppGpp synthetase I (GTP pyrophosphokinase) | chromosome | CDS | 907608 | 2235 | + | 0.509172 |
rfaH | y0460 | transcriptional activator RfaH | chromosome | CDS | 510380 | 489 | - | 0.441718 |
rhaR | y0591 | positive regulator for rhaRS operon | chromosome | CDS | 668152 | 873 | + | 0.490263 |
rhaS | y0590 | positive regulator for rhaBAD operon | chromosome | CDS | 667198 | 822 | + | 0.475669 |
rhlB | y0359 | ATP-dependent RNA helicase | chromosome | CDS | 400456 | 1287 | - | 0.486402 |
rho | y0361 | transcription termination factor Rho | chromosome | CDS | 402667 | 1260 | + | 0.45873 |
rnb | y2077 | exoribonuclease II | chromosome | CDS | 2286866 | 1935 | - | 0.502842 |
rncS | y1297 | ribonuclease III | chromosome | CDS | 1441501 | 681 | + | 0.497797 |
rnk | y0168 | nucleoside diphosphate kinase regulator | chromosome | CDS | 174176 | 411 | + | 0.501217 |
rob | y3723 | right origin-binding protein | chromosome | CDS | 4137895 | 867 | + | 0.469435 |
rpoA | y4015 | DNA-directed RNA polymerase alpha subunit | chromosome | CDS | 4455019 | 990 | + | 0.508081 |
rpoB | y0484 | DNA-directed RNA polymerase beta subunit | chromosome | CDS | 540074 | 4029 | + | 0.493671 |
rpoC | y0485 | DNA-directed RNA polymerase beta' subunit | chromosome | CDS | 544195 | 4257 | + | 0.511863 |
rpoD | y3537 | RNA polymerase sigma factor | chromosome | CDS | 3921388 | 1899 | + | 0.487098 |
rpoE | y1290 | RNA polymerase sigma-70 factor | chromosome | CDS | 1434302 | 576 | + | 0.451389 |
rpoH | y0419 | RNA polymerase sigma factor | chromosome | CDS | 467801 | 858 | + | 0.503497 |
rpoN | y0154 | DNA-directed RNA polymerase subunit N | chromosome | CDS | 162227 | 1434 | + | 0.488842 |
rpoS | y0834 | RNA polymerase sigma factor | chromosome | CDS | 933329 | 999 | + | 0.474474 |
rpoZ | y0102 | DNA-directed RNA polymerase omega subunit | chromosome | CDS | 108672 | 276 | + | 0.514493 |
rstA | y2139 | response transcriptional regulatory protein (RstB sensor) | chromosome | CDS | 2363830 | 801 | + | 0.475655 |
slmA | y0095 | nucleoid occlusion protein | chromosome | CDS | 101600 | 597 | + | 0.479062 |
slyA | y1961 | transcriptional regulator SlyA | chromosome | CDS | 2161852 | 432 | + | 0.402778 |
spoT | y0103 | (p)ppGpp synthetase II | chromosome | CDS | 108967 | 2109 | + | 0.489331 |
srmB | y1287 | ATP-dependent RNA helicase | chromosome | CDS | 1429871 | 1326 | - | 0.505279 |
treR | y0165 | trehalose repressor | chromosome | CDS | 169282 | 954 | + | 0.510482 |
trpR | y3726 | Trp operon repressor | chromosome | CDS | 4140038 | 402 | - | 0.5 |
tyrR | y1988 | transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport | chromosome | CDS | 2187482 | 1668 | + | 0.483213 |
uhpA | y4033 | response regulator | chromosome | CDS | 4469576 | 663 | - | 0.508296 |
uhpA | y2588 | response regulator | chromosome | CDS | 2850881 | 630 | + | 0.487302 |
ureG | y1242 | urease accessory protein | chromosome | CDS | 1390754 | 663 | + | 0.484163 |
uvrY | y2443 | response regulator | chromosome | CDS | 2704374 | 657 | - | 0.455099 |
uxuR | y2904 | regulator for uxu operon | chromosome | CDS | 3208713 | 801 | - | 0.493134 |
vacB | y0637 | ribonuclease R | chromosome | CDS | 720307 | 2535 | + | 0.523077 |
wecD | y0368 | hypothetical protein | chromosome | CDS | 411486 | 795 | + | 0.51195 |
xylR | y4053 | regulator of xyl operon | chromosome | CDS | 4494979 | 1194 | - | 0.484087 |
ybtA | y2398 | AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes | chromosome | CDS | 2653492 | 960 | + | 0.563542 |
ypeR | y1732 | transcriptional activator protein | chromosome | CDS | 1916326 | 738 | + | 0.333333 |
ytbR | y3375 | transcriptional activator | chromosome | CDS | 3720096 | 744 | - | 0.385753 |
zntR | y4017 | zinc-responsive transcriptional regulator | chromosome | CDS | 4456876 | 435 | + | 0.452874 |