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2024-05-18 07:57:35

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 186

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c2742 hypothetical proteinchromosome CDS2585846 543 + 0.567219
NA c3139 Small protein Achromosome CDS3016191 342 + 0.497076
NA c4754 hypothetical proteinchromosome CDS4520103 258 - 0.395349
NA c2396 hypothetical proteinchromosome CDS2200253 315 - 0.352381
NA c2457 Putative amidasechromosome CDS2275682 1488 - 0.563844
NA c0406 50S ribosomal protein L36chromosome CDS387492 144 - 0.430556
NA c3243 hypothetical proteinchromosome CDS3095653 1113 + 0.5292
NA c0385 hypothetical proteinchromosome CDS364237 453 - 0.503311
NA c4561 hypothetical proteinchromosome CDS4333119 1131 - 0.343943
NA c1478 hypothetical proteinchromosome CDS1375014 252 - 0.412698
NA c5211 hypothetical proteinchromosome CDS4965038 1461 - 0.386721
NA c4846 hypothetical proteinchromosome CDS4608966 627 + 0.507177
NA c4178 hypothetical proteinchromosome CDS3960843 153 + 0.372549
NA c2440 hypothetical proteinchromosome CDS2252162 477 + 0.467505
NA c1514 hypothetical proteinchromosome CDS1395370 357 - 0.546219
NA c0277 hypothetical proteinchromosome CDS260823 849 + 0.566549
ansA c2171 cytoplasmic asparaginase Ichromosome CDS2008089 1017 + 0.500492
ansB c3543 L-asparaginase II precursorchromosome CDS3395541 1047 - 0.51958
argS c2291 arginyl-tRNA synthetasechromosome CDS2111615 1734 + 0.529988
asnS c1072 asparaginyl-tRNA synthetasechromosome CDS1038373 1401 - 0.526053
aspS c2280 aspartyl-tRNA synthetasechromosome CDS2100303 1773 - 0.538071
cafA c4001 Ribonuclease Gchromosome CDS3819525 1488 - 0.520833
cca c3806 tRNA nucleotidyltransferasechromosome CDS3642585 1239 + 0.560129
cysS c0642 cysteinyl-tRNA synthetasechromosome CDS623669 1386 + 0.541847
dbpA c1817 ATP-independent RNA helicase dbpAchromosome CDS1648163 1374 + 0.517467
deaD c3916 Cold-shock DEAD-box protein Achromosome CDS3739604 1956 - 0.551125
def c4047 peptide deformylasechromosome CDS3865057 510 + 0.466667
efp c5232 elongation factor Pchromosome CDS4984420 567 + 0.495591
fmt c4048 methionyl-tRNA formyltransferasechromosome CDS3865581 948 + 0.516878
frr c0208 ribosome releasing factorchromosome CDS202905 558 + 0.505376
ftsJ c3936 Ribosomal RNA large subunit methyltransferase Jchromosome CDS3760667 630 - 0.504762
fusA c4112 elongation factor EF-2chromosome CDS3902788 2115 - 0.508274
glnS c0766 glutaminyl-tRNA synthetasechromosome CDS747912 1665 + 0.527928
gltX c2936 glutamyl-tRNA synthetasechromosome CDS2800291 1416 - 0.526836
glyQ c4379 glycyl-tRNA synthetase alpha subunitchromosome CDS4162040 912 - 0.560307
glyS c4378 glycyl-tRNA synthetase beta subunitchromosome CDS4159961 2070 - 0.552657
gshB c3533 glutathione synthetasechromosome CDS3387833 951 + 0.521556
hemK c1670 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1505970 834 + 0.555156
hisS c3036 histidyl-tRNA synthetasechromosome CDS2907927 1275 - 0.545882
ileS c0030 isoleucyl-tRNA synthetasechromosome CDS24653 2817 + 0.547746
infA c1021 translation initiation factor IF-1chromosome CDS980354 219 - 0.484018
infB c3924 translation initiation factor IF-2chromosome CDS3746975 2673 - 0.531987
infC c2115 Translation initiation factor IF-3chromosome CDS1956064 435 - 0.478161
iucB c3626 IucB proteinchromosome CDS3466470 948 - 0.565401
ksgA c0064 dimethyladenosine transferasechromosome CDS54801 822 - 0.537713
lasT c5490 Hypothetical tRNA/rRNA methyltransferase lasTchromosome CDS5230697 708 + 0.484463
leuS c0733 leucyl-tRNA synthetasechromosome CDS712192 2724 - 0.530103
lysS c3469 lysyl-tRNA synthetasechromosome CDS3330630 1518 - 0.525692
lysS c5138 lysyl-tRNA synthetasechromosome CDS4910097 1545 - 0.474434
map c0203 methionine aminopeptidasechromosome CDS199010 795 - 0.50566
miaA c5255 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5007412 951 + 0.53102
pcnB c0176 Poly(A) polymerasechromosome CDS168278 1419 - 0.558844
pheS c2112 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1953927 996 - 0.545181
pnp c3920 Polyribonucleotide nucleotidyltransferasechromosome CDS3742666 2223 - 0.530364
prfA c1669 peptide chain release factor 1chromosome CDS1504888 1083 + 0.527239
prfB c5622 peptide chain release factor 2chromosome CDS3332157 1098 - 0.534608
prfC c5456 peptide chain release factor 3chromosome CDS5198335 1590 + 0.543396
prfH c0382 peptide chain release factor 2chromosome CDS361716 615 + 0.543089
prmA c4024 ribosomal protein L11 methyltransferasechromosome CDS3840838 882 + 0.544218
proS c0235 prolyl-tRNA synthetasechromosome CDS228476 1773 - 0.539763
pth c1662 peptidyl-tRNA hydrolasechromosome CDS1497805 585 - 0.500855
queA c0515 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS499203 1071 + 0.53408
rbfA c3923 ribosome-binding factor Achromosome CDS3746410 420 - 0.519048
rhlB c4700 ATP-dependent RNA helicasechromosome CDS4464529 1266 - 0.522117
rhlE c0880 Putative ATP-dependent RNA helicase rhlEchromosome CDS853494 1362 + 0.563142
rimJ c1333 Ribosomal-protein-alanine acetyltransferasechromosome CDS1269062 585 + 0.494017
rimK c0985 Ribosomal protein S6 modification proteinchromosome CDS946342 903 + 0.559247
rimL c1851 Ribosomal-protein-serine acetyltransferasechromosome CDS1691409 555 + 0.428829
rluC c1355 Ribosomal large subunit pseudouridine synthase Cchromosome CDS1288440 960 + 0.515625
rna c0699 Ribonuclease I precursorchromosome CDS684789 825 - 0.515152
rnd c2208 Ribonuclease Dchromosome CDS2038536 1128 - 0.539007
rne c1353 Ribonuclease Echromosome CDS1284682 3186 - 0.557753
rnpA c4628 ribonuclease Pchromosome CDS4386230 360 + 0.561111
rph c4467 ribonuclease PHchromosome CDS4246832 741 - 0.554656
rplA c4940 50S ribosomal protein L1chromosome CDS4711127 705 + 0.514894
rplB c4085 50S ribosomal protein L2chromosome CDS3881919 822 - 0.526764
rplC c4091 50S ribosomal protein L3chromosome CDS3883673 630 - 0.514286
rplD c4089 50S ribosomal protein L4chromosome CDS3883057 606 - 0.531353
rplE c4072 50S ribosomal protein L5chromosome CDS3878275 540 - 0.496296
rplF c4068 50S ribosomal protein L6chromosome CDS3876983 534 - 0.522472
rplI c5294 50S ribosomal protein L9chromosome CDS5034176 450 + 0.497778
rplJ c4941 50S ribosomal protein L10chromosome CDS4712123 498 + 0.524096
rplK c4939 50S ribosomal protein L11chromosome CDS4710695 429 + 0.517483
rplL c4943 50S ribosomal protein L7/L12chromosome CDS4712687 366 + 0.461749
rplM c3985 50S ribosomal protein L13chromosome CDS3801703 504 - 0.488095
rplN c4075 50S ribosomal protein L14chromosome CDS3879154 372 - 0.510753
rplO c4062 50S ribosomal protein L15chromosome CDS3875481 435 - 0.535632
rplP c4079 50S ribosomal protein L16chromosome CDS3880135 411 - 0.515815
rplQ c4055 50S ribosomal protein L17chromosome CDS3870992 384 - 0.533854
rplR c4066 50S ribosomal protein L18chromosome CDS3876620 354 - 0.536723
rplS c3127 50S ribosomal protein L19chromosome CDS3006881 348 - 0.482759
rplT c2113 50S ribosomal protein L20chromosome CDS1955361 357 - 0.487395
rplV c4082 50S ribosomal protein L22chromosome CDS3881277 333 - 0.498498
rplW c4087 50S ribosomal protein L23chromosome CDS3882758 303 - 0.481848
rplX c4073 50S ribosomal protein L24chromosome CDS3878829 315 - 0.457143
rplY c2722 50S ribosomal protein L25chromosome CDS2572958 381 + 0.485564
rpmA c3942 50S ribosomal protein L27chromosome CDS3766350 258 - 0.5
rpmB c4461 50S ribosomal protein L28chromosome CDS4242436 237 - 0.531646
rpmC c4077 50S ribosomal protein L29chromosome CDS3879944 192 - 0.541667
rpmD c4063 50S ribosomal protein L30chromosome CDS3875919 180 - 0.5
rpmG c4460 50S ribosomal protein L33chromosome CDS4242248 168 - 0.404762
rpmH c4627 50S ribosomal protein L34chromosome CDS4386073 141 + 0.51773
rpsA c1049 30S ribosomal protein S1chromosome CDS1012956 1674 + 0.511947
rpsB c0204 30S ribosomal protein S2chromosome CDS199974 924 + 0.504329
rpsC c4080 30S ribosomal protein S3chromosome CDS3880558 702 - 0.509971
rpsD c4057 30S ribosomal protein S4chromosome CDS3872431 621 - 0.507246
rpsE c4065 30S ribosomal protein S5chromosome CDS3876102 504 - 0.5
rpsF c5291 30S ribosomal protein S6chromosome CDS5033186 396 + 0.527778
rpsG c4114 30S ribosomal protein S7chromosome CDS3904999 471 - 0.496815
rpsH c4070 30S ribosomal protein S8chromosome CDS3877529 393 - 0.501272
rpsI c3984 30S ribosomal protein S9chromosome CDS3801295 393 - 0.521628
rpsJ c4092 30S ribosomal protein S10chromosome CDS3884335 312 - 0.554487
rpsK c4058 30S ribosomal protein S11chromosome CDS3873085 390 - 0.515385
rpsL c4116 30S ribosomal protein S12chromosome CDS3905566 435 - 0.508046
rpsM c4060 30S ribosomal protein S13chromosome CDS3873491 357 - 0.518207
rpsN c4071 30S ribosomal protein S14chromosome CDS3877955 306 - 0.526144
rpsO c3921 30S ribosomal protein S15chromosome CDS3745048 270 - 0.518519
rpsP c3130 30S ribosomal protein S16chromosome CDS3008635 309 - 0.511327
rpsQ c4076 30S ribosomal protein S17chromosome CDS3879690 255 - 0.47451
rpsR c5292 30S ribosomal protein S18chromosome CDS5033907 228 + 0.526316
rpsS c4083 30S ribosomal protein S19chromosome CDS3881624 279 - 0.491039
rpsT c0027 30S ribosomal protein S20chromosome CDS23077 264 - 0.462121
rpsU c3816 30S ribosomal protein S21chromosome CDS3651375 216 + 0.518519
rsmC c5450 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS5195590 1032 - 0.55814
rsuA c2720 Ribosomal small subunit pseudouridine synthase Achromosome CDS2570324 792 - 0.522727
rumA c3348 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3188517 1302 - 0.509985
selB c4411 Selenocysteine-specific elongation factorchromosome CDS4193717 1845 - 0.565854
serS c1030 seryl-tRNA synthetasechromosome CDS993610 1293 + 0.526682
sfhB c3116 Ribosomal large subunit pseudouridine synthase Dchromosome CDS2997732 981 - 0.530071
speG c1974 Spermidine N(1)-acetyltransferasechromosome CDS1816891 561 + 0.468806
spoU c4476 tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS4255517 690 + 0.556522
srmB c3100 ATP-dependent RNA helicase srmBchromosome CDS2975763 1335 + 0.546816
sun c4049 SUN proteinchromosome CDS3866580 1290 + 0.49845
tgt c0516 queuine tRNA-ribosyltransferasechromosome CDS500328 1128 + 0.512411
thrS c2116 threonyl-tRNA synthetasechromosome CDS1956610 1929 - 0.494038
trmA c4928 tRNA (uracil-5-)-methyltransferasechromosome CDS4694574 1101 - 0.503179
trmD c3128 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3007270 768 - 0.533854
trpS c4154 tryptophanyl-tRNA synthetasechromosome CDS3938687 1005 - 0.524378
truA c2863 tRNA pseudouridine synthase Achromosome CDS2716624 813 - 0.557196
truB c3922 tRNA pseudouridine synthase Bchromosome CDS3745466 945 - 0.528042
tsf c0206 elongation factor Tschromosome CDS201032 852 + 0.495305
tuf c4111 elongation factor Tuchromosome CDS3901533 1230 - 0.531707
tuf c4935 elongation factor Tuchromosome CDS4708192 1185 + 0.531646
tyrS c2029 tyrosyl-tRNA synthetasechromosome CDS1876477 1287 - 0.51826
valS c5358 valyl-tRNA synthetasechromosome CDS5099818 2856 - 0.55042
yabO c0069 Ribosomal large subunit pseudouridine synthase Achromosome CDS61489 660 - 0.542424
yadB c0177 glutamyl-tRNA synthetasechromosome CDS169735 927 - 0.536138
yadP c0180 2'-5' RNA ligasechromosome CDS172050 540 - 0.564815
yaeJ c0230 hypothetical proteinchromosome CDS224867 423 + 0.543735
ybjF c0992 23S rRNA (uracil-5-)-methyltransferasechromosome CDS952882 1128 + 0.542553
ycdK c1147 Hypothetical protein ycdKchromosome CDS1105268 387 - 0.547804
ycfB c1512 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1393561 1152 - 0.532118
ychF c1661 Probable GTP-binding protein ychFchromosome CDS1496597 1092 - 0.513736
yciH c1751 hypothetical proteinchromosome CDS1586948 330 + 0.493939
yciL c1734 Hypothetical protein yciLchromosome CDS1570452 876 + 0.534247
yciO c1732 Protein yciOchromosome CDS1567666 657 + 0.499239
yeiP c2708 elongation factor Pchromosome CDS2555730 828 + 0.503623
yfbG c2797 hypothetical proteinchromosome CDS2654421 1983 + 0.509329
yfcB c2876 Hypothetical adenine-specific methylase yfcBchromosome CDS2729306 1266 - 0.522907
yfhC c3082 Hypothetical protein yfhCchromosome CDS2960221 537 - 0.52514
yfhQ c3058 Hypothetical tRNA/rRNA methyltransferase yfhQchromosome CDS2930583 741 - 0.54251
yfiA c3119 Protein yfiAchromosome CDS2999854 342 + 0.461988
yfiF c3106 Hypothetical tRNA/rRNA methyltransferase yfiFchromosome CDS2980183 1113 - 0.566038
yfjA c3129 16S rRNA-processing proteinchromosome CDS3008068 558 - 0.489247
ygjO c3842 Putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3674810 1137 - 0.540018
yhaR c3871 TdcF proteinchromosome CDS3699101 453 - 0.518764
yhbH c3963 Probable sigma(54) modulation proteinchromosome CDS3779666 288 + 0.447917
yhbY c3937 Hypothetical protein yhbYchromosome CDS3761422 294 + 0.486395
yhdG c4026 Hypothetical protein yhdGchromosome CDS3842048 966 + 0.519669
yibK c4428 Hypothetical tRNA/rRNA methyltransferase yibKchromosome CDS4215398 474 + 0.548523
yicN c4587 Hypothetical protein yicNchromosome CDS4346744 480 - 0.527083
yihZ c4834 D-tyrosyl-tRNA deacylasechromosome CDS4599117 438 + 0.545662
yjbC c4988 Hypothetical protein yjbCchromosome CDS4766160 873 + 0.505155
yjbN c5018 Hypothetical protein yjbNchromosome CDS4792189 996 + 0.538153
yjeA c5243 lysyl-tRNA synthetasechromosome CDS4991283 1059 + 0.519358
yjeJ c5230 Hypothetical protein yjeJchromosome CDS4982246 870 - 0.452874
yjfH c5264 Hypothetical tRNA/rRNA methyltransferase yjfHchromosome CDS5017346 732 + 0.564208
yjgF c5342 Protein yjgFchromosome CDS5087601 459 - 0.511983
ykgM c0407 50S ribosomal protein L31chromosome CDS387632 267 - 0.460674
yleA c0747 Hypothetical protein yleAchromosome CDS726403 1425 - 0.548772
yliG c0920 Hypothetical protein yliGchromosome CDS897604 1326 - 0.522624
yoaB c2213 Hypothetical protein yoaBchromosome CDS2044991 393 + 0.508906
yohI c2672 Hypothetical protein yohIchromosome CDS2521130 1017 - 0.531957
yqcB c3357 Hypothetical protein yqcBchromosome CDS3197819 783 - 0.542784
yrdC c4043 Protein yrdCchromosome CDS3862210 618 - 0.524272
yrfH c4171 Heat shock protein 15chromosome CDS3955401 402 + 0.527363