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2024-05-18 12:59:04

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Yersinia pestis KIM, KIM

Number of genes found: 182

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y0551 hypothetical proteinchromosome CDS618106 1080 - 0.525
NA y1307 deaminasechromosome CDS1449259 603 + 0.533997
NA y1332 ATP synthase beta subunitchromosome CDS1478572 774 + 0.502584
NA y2845 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3145392 1131 - 0.521662
NA y0810 hypothetical proteinchromosome CDS907473 126 + 0.507937
NA y0680 hypothetical proteinchromosome CDS763503 294 - 0.438776
NA y1068 glucose-1-phosphate cytidylyltransferasechromosome CDS1203414 786 + 0.437659
NA y2298 GTP-binding proteinchromosome CDS2533619 1092 + 0.495421
NA y2407 hypothetical proteinchromosome CDS2678272 582 + 0.489691
NA y0793 hypothetical proteinchromosome CDS884396 576 - 0.565972
NA y1750 hypothetical proteinchromosome CDS1934904 1026 + 0.501949
NA y2240 hypothetical proteinchromosome CDS2469182 345 + 0.486957
NA y0554 hypothetical proteinchromosome CDS621131 1062 - 0.490584
NA y3708 hypothetical proteinchromosome CDS4122538 2448 + 0.35335
NA y0895 16S rRNA-processing proteinchromosome CDS1004825 561 + 0.467023
NA y2312 hypothetical proteinchromosome CDS2545915 1074 + 0.485102
NA y3834 pectate lyasechromosome CDS4266709 1719 + 0.4968
NA y3143 hypothetical proteinchromosome CDS3455475 774 - 0.48708
NA y3678 hypothetical proteinchromosome CDS4088198 621 + 0.489533
NA Y1032 hypothetical proteinpMT-1 CDS23344 456 + 0.576754
NA y1048 50S ribosomal protein L31chromosome CDS1181975 324 - 0.429012
NA y3590 enzymechromosome CDS3983335 1191 - 0.496222
NA y0574 hypothetical proteinchromosome CDS649215 1038 + 0.519268
NA y3920 hypothetical proteinchromosome CDS4376839 408 - 0.522059
NA y4027 hypothetical proteinchromosome CDS4464830 585 + 0.466667
NA y3551 hypothetical proteinchromosome CDS3932082 381 - 0.354331
NA y0618 lysyl-tRNA synthetasechromosome CDS696809 999 + 0.491491
NA y0638 hypothetical proteinchromosome CDS722960 741 + 0.538462
NA y1195 hypothetical proteinchromosome CDS1338920 1539 - 0.481481
NA y3542 hypothetical proteinchromosome CDS3924909 513 - 0.419103
NA y0928 amidasechromosome CDS1044498 1398 - 0.550072
NA y1584 adenine-specific methylasechromosome CDS1751198 1002 + 0.48004
NA y0156 sigma-54 modulation proteinchromosome CDS163798 174 + 0.385057
NA y1801 hypothetical proteinchromosome CDS1980775 627 - 0.492823
NA y0170 hypothetical proteinchromosome CDS175412 645 - 0.415504
NA y2355 hypothetical proteinchromosome CDS2595870 900 - 0.438889
NA y0155 sigma-54 modulation proteinchromosome CDS163684 108 + 0.361111
NA y2313 hypothetical proteinchromosome CDS2547779 906 + 0.40287
NA y3111 hypothetical proteinchromosome CDS3425034 441 - 0.489796
NA y2901 elongation factor Pchromosome CDS3204538 642 + 0.457944
NA y0920 hypothetical proteinchromosome CDS1036186 1182 + 0.532995
NA y0910 yhbH sigma 54 modulatorchromosome CDS1017874 465 - 0.434409
NA y2070 hypothetical proteinchromosome CDS2280805 327 + 0.477064
NA y2054 hypothetical proteinchromosome CDS2262752 1035 + 0.510145
NA y2053 hypothetical proteinchromosome CDS2261768 621 + 0.460548
NA y0163 hypothetical proteinchromosome CDS167848 426 + 0.476526
NA y3550 hypothetical proteinchromosome CDS3931393 405 - 0.511111
NA y3015 regulator proteinchromosome CDS3323569 945 - 0.486772
NA y0789 glutamyl-tRNA synthetasechromosome CDS881676 1155 - 0.500433
NA y1830 hypothetical proteinchromosome CDS2015426 408 - 0.426471
NA y1799 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1979034 1116 - 0.499104
NA y3782 hypothetical proteinchromosome CDS4202247 537 - 0.409683
NA y0213 dehydrogenasechromosome CDS228754 1068 + 0.5103
NA y1919 hypothetical proteinchromosome CDS2112386 2004 + 0.457585
NA y0071 hypothetical proteinchromosome CDS80349 585 + 0.488889
NA y3800 D-tyrosyl-tRNA deacylasechromosome CDS4219550 438 - 0.488584
alaS y0883 alanyl-tRNA synthetasechromosome CDS992238 2628 + 0.5
ansA y2161 cytoplasmic asparaginase Ichromosome CDS2389132 1017 + 0.476893
ansB y2787 periplasmic L-asparaginase IIchromosome CDS3082839 1038 - 0.467245
argS y2266 arginyl-tRNA synthetasechromosome CDS2494665 1731 + 0.499133
asnS y2758 asparaginyl-tRNA synthetasechromosome CDS3045805 1401 + 0.498929
aspS y2258 aspartyl-tRNA synthetasechromosome CDS2486068 1797 - 0.510295
cafA y0196 cytoplasmic filament proteinchromosome CDS211201 1470 - 0.476871
cca y3529 tRNA nucleotidyl transferasechromosome CDS3913843 1239 + 0.533495
cysS y1107 cysteinyl-tRNA synthetasechromosome CDS1245716 1431 + 0.494759
dbpA y2531 ATP-dependent RNA helicasechromosome CDS2792757 1383 - 0.501085
deaD y0696 inducible ATP-independent RNA helicasechromosome CDS781467 2010 + 0.535323
def y4023 peptide deformylasechromosome CDS4462047 513 - 0.452242
efp y0612 elongation factor Pchromosome CDS691748 567 + 0.485009
fmt y4022 methionyl-tRNA formyltransferasechromosome CDS4461075 948 - 0.470464
frr y3133 ribosome releasing factorchromosome CDS3446092 558 - 0.47491
ftsJ y0681 cell division proteinchromosome CDS763931 642 + 0.453271
fusA y3985 GTP-binding protein chain elongation factor EF-Gchromosome CDS4437385 2109 + 0.480797
glnS y1205 glutaminyl-tRNA synthetasechromosome CDS1352518 1797 + 0.491375
gltX y1498 glutamyl-tRNA synthetasechromosome CDS1659754 1416 - 0.492232
glyQ y4090 glycyl-tRNA synthetase alpha subunitchromosome CDS4540086 915 - 0.527869
glyS y4089 glycyl-tRNA synthetase beta subunitchromosome CDS4538007 2070 - 0.523188
gshB y3321 glutathione synthetasechromosome CDS3655274 960 + 0.491667
hemK y2289 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2525704 831 - 0.535499
hisS y1354 histidyl-tRNA synthetasechromosome CDS1505369 1275 + 0.508235
holE y2525 DNA polymerase III, theta subunitchromosome CDS2787116 270 + 0.444444
ileS y3700 isoleucyl-tRNA synthetasechromosome CDS4111052 2817 - 0.500887
infA y2807 translation initiation factor IF-1chromosome CDS3110712 219 + 0.497717
infB y0688 translation initiation factor IF-2chromosome CDS771942 2679 + 0.4972
infC y1904 protein chain initiation factor IF-3chromosome CDS2101260 351 + 0.475783
iucB y3382 acetyl CoA:N6-hydroxylsyine acetyl transferasechromosome CDS3727395 951 + 0.554154
ksgA y3683 dimethyladenosine transferasechromosome CDS4094820 819 + 0.47619
leuS y1184 leucyl-tRNA synthetasechromosome CDS1327045 2583 - 0.510647
lysS y3272 lysyl-tRNA synthetasechromosome CDS3601776 1518 - 0.479578
map y3138 methionine aminopeptidasechromosome CDS3449864 792 + 0.488636
map y0852 methionine aminopeptidasechromosome CDS954351 786 - 0.510178
miaA y0629 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS712247 942 + 0.511677
pcnB y0788 poly(A) polymerase Ichromosome CDS880112 1476 - 0.523713
pheS y1908 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2102797 984 + 0.47561
pnp y0694 polynucleotide phosphorylasechromosome CDS778073 2214 + 0.498645
prfA y2290 peptide chain release factor 1chromosome CDS2526534 1083 - 0.514312
prfB y3273 peptide chain release factor RF-2chromosome CDS3603303 933 - 0.46731
prfC y3749 peptide chain release factor 3chromosome CDS4169136 1590 - 0.497484
prmA y0212 ribosomal protein L11 methyltransferasechromosome CDS227347 921 + 0.53203
proS y3109 prolyl-tRNA synthetasechromosome CDS3422414 1719 + 0.499127
pth y2297 peptidyl-tRNA hydrolasechromosome CDS2532835 621 + 0.47182
queA y0990 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1120869 1071 + 0.513539
rbfA y0689 ribosome-binding factor Achromosome CDS774632 465 + 0.453763
rhlB y0359 ATP-dependent RNA helicasechromosome CDS400456 1287 - 0.486402
rimJ y2271 ribosomal-protein-alanine N-acetyltransferasechromosome CDS2506979 585 - 0.483761
rnd y2235 RNase Dchromosome CDS2462022 1161 - 0.477175
rne y1749 RNase Echromosome CDS1930742 3651 - 0.510819
rnpA y4115 ribonuclease Pchromosome CDS4567376 360 + 0.508333
rph y0097 ribonuclease PHchromosome CDS103145 717 - 0.51325
rplA y0481 50S ribosomal protein L1chromosome CDS537730 705 + 0.47234
rplB y3993 50S ribosomal protein L2chromosome CDS4444670 825 + 0.515152
rplC y3990 50S ribosomal protein L3chromosome CDS4443103 630 + 0.488889
rplD y3991 50S ribosomal protein L4chromosome CDS4443749 606 + 0.50165
rplE y4001 50S ribosomal protein L5chromosome CDS4448610 540 + 0.488889
rplF y4004 50S ribosomal protein L6chromosome CDS4449909 534 + 0.513109
rplI y0647 50S ribosomal protein L9chromosome CDS730390 453 + 0.494481
rplJ y0482 50S ribosomal protein L10chromosome CDS538799 498 + 0.493976
rplK y0480 50S ribosomal protein L11chromosome CDS537298 429 + 0.487179
rplL y0483 50S ribosomal subunit protein L7/L12chromosome CDS539363 369 + 0.468835
rplM y0134 50S ribosomal protein L13chromosome CDS145814 444 - 0.490991
rplN y3999 50S ribosomal protein L14chromosome CDS4447899 372 + 0.502688
rplO y4009 50S ribosomal protein L15chromosome CDS4451509 435 + 0.510345
rplP y3996 50S ribosomal protein L16chromosome CDS4446863 411 + 0.508516
rplQ y4016 50S ribosomal protein L17chromosome CDS4456049 390 + 0.54359
rplR y4006 50S ribosomal protein L18chromosome CDS4450452 354 + 0.516949
rplS y0897 50S ribosomal protein L19chromosome CDS1006245 348 + 0.477012
rplT y1905 50S ribosomal protein L20chromosome CDS2101942 357 + 0.498599
rplU y0672 50S ribosomal protein L21chromosome CDS756483 360 + 0.463889
rplV y3994 50S ribosomal protein L22chromosome CDS4445802 333 + 0.501502
rplW y3992 50S ribosomal protein L23chromosome CDS4444351 303 + 0.485149
rplX y4000 50S ribosomal protein L24chromosome CDS4448281 315 + 0.460317
rplY y2920 50S ribosomal protein L25chromosome CDS3226637 285 + 0.463158
rpmA y0673 50S ribosomal protein L27chromosome CDS756862 258 + 0.488372
rpmC y3998 50S ribosomal subunit protein L29chromosome CDS4447273 192 + 0.5
rpmD y4008 50S ribosomal protein L30chromosome CDS4451326 180 + 0.433333
rpmE y0299 50S ribosomal protein L31chromosome CDS319574 273 + 0.505495
rpmF y1753 50S ribosomal protein L32chromosome CDS1937327 168 + 0.553571
rpmG y0091 50S ribosomal protein L33chromosome CDS98285 168 - 0.392857
rpmH y4114 50S ribosomal protein L34chromosome CDS4567217 141 + 0.510638
rpsA y2781 30S ribosomal protein S1chromosome CDS3073855 1674 - 0.479092
rpsB y3137 30S ribosomal protein S2chromosome CDS3448704 810 - 0.47284
rpsC y3995 30S ribosomal protein S3chromosome CDS4446152 699 + 0.493562
rpsD y4014 30S ribosomal protein S4chromosome CDS4454373 621 + 0.478261
rpsE y4007 30S ribosomal protein S5chromosome CDS4450820 504 + 0.484127
rpsF y0645 30S ribosomal protein S6chromosome CDS729400 393 + 0.508906
rpsG y3984 30S ribosomal protein S7chromosome CDS4436821 471 + 0.47983
rpsH y4003 30S ribosomal protein S8chromosome CDS4449502 393 + 0.475827
rpsI y0133 30S ribosomal protein S9chromosome CDS145407 399 - 0.493734
rpsJ y3989 30S ribosomal protein S10chromosome CDS4442759 312 + 0.525641
rpsK y4013 30S ribosomal protein S11chromosome CDS4453953 390 + 0.502564
rpsL y3983 30S ribosomal protein S12chromosome CDS4436350 375 + 0.506667
rpsM y4012 30S ribosomal protein S13chromosome CDS4453580 357 + 0.504202
rpsN y4002 30S ribosomal protein S14chromosome CDS4449163 306 + 0.513072
rpsO y0691 30S ribosomal protein S15chromosome CDS776192 270 + 0.485185
rpsP y0894 30S ribosomal protein S16chromosome CDS1004567 249 + 0.502008
rpsR y0646 30S ribosomal protein S18chromosome CDS730123 228 + 0.473684
rpsT y3702 30S ribosomal protein S20chromosome CDS4115253 264 + 0.465909
rpsU y3535 30S ribosomal protein S21chromosome CDS3919191 216 + 0.462963
rsmC y3753 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4171842 1044 + 0.521073
rsuA y2917 16S pseudouridylate 516 synthasechromosome CDS3223497 708 - 0.519774
selB y4073 selenocysteinyl-tRNA-specific translation factorchromosome CDS4516344 1953 - 0.55658
serS y2796 seryl-tRNA synthetasechromosome CDS3095713 1293 - 0.491106
sfhB y0912 suppressor of ftsH mutationchromosome CDS1019458 978 + 0.482618
smpA y3076 small membrane protein Achromosome CDS3386972 351 + 0.45584
speG y1405 spermidine N1-acetyltransferasechromosome CDS1562612 546 - 0.39011
spoU y0104 RNA methylasechromosome CDS111081 693 + 0.496392
srmB y1287 ATP-dependent RNA helicasechromosome CDS1429871 1326 - 0.505279
sun y4021 hypothetical proteinchromosome CDS4459692 1290 - 0.460465
tccC1 y0190 toxin subunitchromosome CDS198944 2832 + 0.481992
tgt y0991 queuine tRNA-ribosyltransferasechromosome CDS1122032 1125 + 0.490667
thrS y1903 threonyl-tRNA synthetasechromosome CDS2099127 1929 + 0.473302
trmA y0324 tRNA (uracil-5-)-methyltransferasechromosome CDS351204 1104 - 0.477355
trmD y0896 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS1005367 798 + 0.518797
trpS y3940 tryptophanyl-tRNA synthetasechromosome CDS4394039 1041 + 0.48415
truA y1599 tRNA pseudouridine synthase Achromosome CDS1767991 882 + 0.50907
truB y0690 tRNA pseudouridine synthase Bchromosome CDS775096 975 + 0.494359
tsf y3135 elongation factor Tschromosome CDS3447719 858 - 0.480186
tuf y0477 elongation factor Tuchromosome CDS534742 1185 + 0.479325
tuf y3986 elongation factor Tuchromosome CDS4439566 1185 + 0.481857
tyrS y1966 tyrosyl-tRNA synthetasechromosome CDS2165848 1287 + 0.487956
valS y0743 valyl-tRNA synthetasechromosome CDS827335 2898 - 0.519669
ysuH y2639 siderophore biosynthetic proteinchromosome CDS2906820 582 - 0.484536