Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Organism: Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
Number of genes found: 116
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
alaS | BUsg390 | alanyl-tRNA synthetase | chromosome | CDS | 440181 | 2652 | + | 0.237557 |
argS | BUsg237 | arginyl-tRNA synthetase | chromosome | CDS | 273397 | 1743 | - | 0.2358 |
asnS | BUsg348 | asparaginyl-tRNA synthetase | chromosome | CDS | 393231 | 1401 | - | 0.281228 |
aspS | BUsg306 | aspartyl-tRNA synthetase | chromosome | CDS | 349957 | 1755 | + | 0.243305 |
cca | BUsg058 | tRNA nucleotidyltransferase | chromosome | CDS | 66445 | 1239 | + | 0.248588 |
cysS | BUsg471 | cysteinyl-tRNA synthetase | chromosome | CDS | 537706 | 1392 | - | 0.243534 |
deaD | BUsg360 | ATP-dependent RNA helicase DeaD | chromosome | CDS | 409915 | 1806 | - | 0.316722 |
def | BUsg477 | polypeptide deformylase | chromosome | CDS | 545791 | 504 | + | 0.234127 |
efp | BUsg021 | elongation factor P | chromosome | CDS | 21429 | 564 | + | 0.257092 |
fmt | BUsg478 | methionyl-tRNA formyltransferase | chromosome | CDS | 546330 | 945 | + | 0.260317 |
frr | BUsg228 | ribosome recycling factor | chromosome | CDS | 258819 | 558 | + | 0.24552 |
ftsJ | BUsg370 | cell division protein FtsJ | chromosome | CDS | 424732 | 621 | - | 0.278583 |
fusA | BUsg508 | elongation factor G | chromosome | CDS | 562570 | 2109 | - | 0.323376 |
glnS | BUsg398 | glutaminyl-tRNA synthetase | chromosome | CDS | 450031 | 1704 | + | 0.238263 |
gltX | BUsg065 | glutamyl-tRNA synthetase | chromosome | CDS | 75095 | 1458 | + | 0.249657 |
glyQ | BUsg128 | glycyl-tRNA synthetase alpha subunit | chromosome | CDS | 142755 | 879 | - | 0.265074 |
glyS | BUsg127 | glyS: glycyl-tRNA synthetase beta chain | chromosome | CDS | 140651 | 2139 | - | 0.220664 |
gshB | BUsg529 | glutathione synthetase | chromosome | CDS | 584745 | 963 | + | 0.263759 |
hemK | BUsg166 | HemK | chromosome | CDS | 186370 | 828 | + | 0.247585 |
hisS | BUsg277 | histidyl-tRNA synthetase | chromosome | CDS | 315534 | 1287 | + | 0.236985 |
ileS | BUsg142 | isoleucyl-tRNA synthetase | chromosome | CDS | 157362 | 2817 | - | 0.247426 |
infA | BUsg305 | translation initiation factor IF-1 | chromosome | CDS | 349547 | 219 | + | 0.287671 |
infB | BUsg365 | translation initiation factor IF-2 | chromosome | CDS | 416304 | 2604 | - | 0.263825 |
infC | BUsg118 | translation initiation factor IF-3 | chromosome | CDS | 132879 | 540 | + | 0.305556 |
ksgA | BUsg134 | dimethyladenosine transferase | chromosome | CDS | 148228 | 825 | + | 0.215758 |
leuS | BUsg429 | leucyl-tRNA synthetase | chromosome | CDS | 485213 | 2586 | + | 0.253287 |
lysS | BUsg422 | lysyl-tRNA synthetase | chromosome | CDS | 477625 | 1512 | + | 0.236772 |
map | BUsg224 | methionine aminopeptidase | chromosome | CDS | 255297 | 786 | - | 0.270992 |
metG | BUsg102 | methionyl-tRNA synthetase | chromosome | CDS | 114350 | 1638 | + | 0.24359 |
pheS | BUsg121 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 134240 | 990 | + | 0.235354 |
pnp | BUsg361 | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 412142 | 2124 | - | 0.306497 |
prfA | BUsg165 | peptide chain release factor 1 | chromosome | CDS | 185288 | 1086 | + | 0.280847 |
prfC | BUsg523 | peptide chain release factor 3 | chromosome | CDS | 577410 | 1590 | - | 0.274843 |
proS | BUsg234 | prolyl-tRNA synthetase | chromosome | CDS | 268140 | 1716 | - | 0.247086 |
pth | BUsg184 | peptidyl-tRNA hydrolase | chromosome | CDS | 206033 | 549 | + | 0.233151 |
queA | BUsg124 | S-adenosylmethionine:tRNA ribosyltransferase | chromosome | CDS | 138018 | 1074 | + | 0.242086 |
rbfA | BUsg364 | ribosome-binding factor A | chromosome | CDS | 415871 | 375 | - | 0.218667 |
rimM | BUsg382 | 16S rRNA processing protein RimM | chromosome | CDS | 433895 | 528 | + | 0.200758 |
rluC | BUsg336 | ribosomal large subunit pseudouridine synthase | chromosome | CDS | 383734 | 945 | + | 0.261376 |
rluD | BUsg388 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 438286 | 948 | - | 0.270042 |
rne | BUsg335 | ribonuclease E | chromosome | CDS | 380518 | 2907 | - | 0.234606 |
rnpA | BUsg014 | ribonuclease P protein component | chromosome | CDS | 14337 | 345 | + | 0.223188 |
rplA | BUsg038 | 50S ribosomal protein L1 | chromosome | CDS | 46191 | 696 | - | 0.288793 |
rplB | BUsg502 | 50S ribosomal protein L2 | chromosome | CDS | 558328 | 822 | - | 0.340633 |
rplC | BUsg505 | 50S ribosomal protein L3 | chromosome | CDS | 560087 | 630 | - | 0.315873 |
rplD | BUsg504 | 50S ribosomal protein L4 | chromosome | CDS | 559464 | 606 | - | 0.326733 |
rplE | BUsg493 | 50S ribosomal protein L5 | chromosome | CDS | 554697 | 540 | - | 0.305556 |
rplF | BUsg490 | 50S ribosomal protein L6 | chromosome | CDS | 553404 | 576 | - | 0.321181 |
rplI | BUsg542 | 50S ribosomal protein L9 | chromosome | CDS | 595163 | 453 | - | 0.260486 |
rplJ | BUsg037 | 50S ribosomal protein L10 | chromosome | CDS | 45446 | 498 | - | 0.269076 |
rplK | BUsg039 | 50S ribosomal protein L11 | chromosome | CDS | 46888 | 429 | - | 0.305361 |
rplL | BUsg036 | 50S ribosomal protein L7/L12 | chromosome | CDS | 45007 | 390 | - | 0.310256 |
rplM | BUsg378 | 50S ribosomal protein L13 | chromosome | CDS | 430157 | 441 | - | 0.260771 |
rplN | BUsg495 | 50S ribosomal protein L14 | chromosome | CDS | 555590 | 369 | - | 0.349593 |
rplO | BUsg486 | 50S ribosomal protein L15 | chromosome | CDS | 551891 | 435 | - | 0.317241 |
rplP | BUsg498 | 50S ribosomal protein L16 | chromosome | CDS | 556538 | 411 | - | 0.360097 |
rplQ | BUsg479 | 50S ribosomal protein L17 | chromosome | CDS | 547397 | 417 | - | 0.275779 |
rplR | BUsg489 | 50S ribosomal protein L18 | chromosome | CDS | 553037 | 366 | - | 0.29235 |
rplS | BUsg384 | 50S ribosomal protein L19 | chromosome | CDS | 435240 | 348 | + | 0.304598 |
rplT | BUsg120 | 50S ribosomal protein L20 | chromosome | CDS | 133729 | 357 | + | 0.322129 |
rplU | BUsg374 | 50S ribosomal protein L21 | chromosome | CDS | 427917 | 324 | + | 0.231481 |
rplV | BUsg500 | 50S ribosomal protein L22 | chromosome | CDS | 557682 | 333 | - | 0.324324 |
rplW | BUsg503 | 50S ribosomal protein L23 | chromosome | CDS | 559165 | 303 | - | 0.250825 |
rplX | BUsg494 | 50S ribosomal protein L24 | chromosome | CDS | 555252 | 315 | - | 0.250794 |
rplY | BUsg131 | 50S ribosomal protein L25 | chromosome | CDS | 145504 | 291 | + | 0.250859 |
rpmA | BUsg375 | 50S ribosomal protein L27 | chromosome | CDS | 428247 | 255 | + | 0.32549 |
rpmB | BUsg079 | 50S ribosomal protein L28 | chromosome | CDS | 87863 | 237 | - | 0.295359 |
rpmC | BUsg497 | 50S ribosomal protein L29 | chromosome | CDS | 556341 | 198 | - | 0.277778 |
rpmD | BUsg487 | 50S ribosomal protein L30 | chromosome | CDS | 552330 | 180 | - | 0.288889 |
rpmE | BUsg556 | 50S ribosomal protein L31 | chromosome | CDS | 612168 | 219 | - | 0.269406 |
rpmF | BUsg337 | ribosomal protein L32 | chromosome | CDS | 384782 | 165 | + | 0.321212 |
rpmG | BUsg078 | 50S ribosomal protein L33 | chromosome | CDS | 87690 | 168 | - | 0.22619 |
rpmH | BUsg013 | 50S ribosomal protein L34 | chromosome | CDS | 14180 | 144 | + | 0.347222 |
rpmI | BUsg119 | 50S ribosomal protein L35 | chromosome | CDS | 133490 | 198 | + | 0.252525 |
rpmJ | BUsg484 | 50S ribosomal protein L36 | chromosome | CDS | 550411 | 117 | - | 0.34188 |
rpsA | BUsg299 | 30S ribosomal protein S1 | chromosome | CDS | 341938 | 1680 | - | 0.296429 |
rpsB | BUsg225 | 30S ribosomal protein S2 | chromosome | CDS | 256370 | 735 | + | 0.303401 |
rpsC | BUsg499 | 30S ribosomal protein S3 | chromosome | CDS | 556961 | 702 | - | 0.343305 |
rpsD | BUsg481 | 30S ribosomal protein S4 | chromosome | CDS | 548886 | 621 | - | 0.296296 |
rpsE | BUsg488 | 30S ribosomal protein S5 | chromosome | CDS | 552518 | 504 | - | 0.339286 |
rpsF | BUsg544 | 30S ribosomal protein S6 | chromosome | CDS | 595963 | 342 | - | 0.245614 |
rpsG | BUsg509 | 30S ribosomal protein S7 | chromosome | CDS | 564780 | 471 | - | 0.329087 |
rpsH | BUsg491 | 30S ribosomal protein S8 | chromosome | CDS | 553951 | 393 | - | 0.315522 |
rpsI | BUsg377 | 30S ribosomal protein S9 | chromosome | CDS | 429748 | 393 | - | 0.340967 |
rpsJ | BUsg506 | 30S ribosomal protein S10 | chromosome | CDS | 560753 | 312 | - | 0.375 |
rpsK | BUsg482 | 30S ribosomal protein S11 | chromosome | CDS | 549532 | 393 | - | 0.37659 |
rpsL | BUsg510 | 30S ribosomal protein S12 | chromosome | CDS | 565309 | 375 | - | 0.370667 |
rpsM | BUsg483 | 30S ribosomal protein S13 | chromosome | CDS | 549942 | 357 | - | 0.288515 |
rpsN | BUsg492 | 30S ribosomal protein S14 | chromosome | CDS | 554374 | 306 | - | 0.349673 |
rpsO | BUsg362 | ribosomal protein S15 | chromosome | CDS | 414539 | 270 | - | 0.22963 |
rpsP | BUsg381 | ribosomal protein S16 | chromosome | CDS | 433641 | 258 | + | 0.282946 |
rpsQ | BUsg496 | 30S ribosomal protein S17 | chromosome | CDS | 556090 | 255 | - | 0.270588 |
rpsR | BUsg543 | 30S ribosomal protein S18 | chromosome | CDS | 595672 | 228 | - | 0.337719 |
rpsS | BUsg501 | 30S ribosomal protein S19 | chromosome | CDS | 558033 | 279 | - | 0.311828 |
rpsT | BUsg144 | 30S ribosomal protein S20 | chromosome | CDS | 161309 | 270 | + | 0.266667 |
rpsU | BUsg054 | 30S ribosomal protein S21 | chromosome | CDS | 62833 | 216 | - | 0.351852 |
serS | BUsg303 | seryl-tRNA synthetase | chromosome | CDS | 346910 | 1284 | - | 0.267913 |
smpA | BUsg180 | small protein A | chromosome | CDS | 203016 | 315 | + | 0.203175 |
tgt | BUsg125 | queuine tRNA-ribosyltransferase | chromosome | CDS | 139148 | 1107 | + | 0.264679 |
thrS | BUsg117 | threonyl-tRNA synthetase | chromosome | CDS | 130947 | 1929 | + | 0.25661 |
trmD | BUsg383 | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 434413 | 789 | + | 0.259823 |
trmU | BUsg252 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 287920 | 1104 | + | 0.248188 |
trpS | BUsg517 | tryptophanyl-tRNA synthetase | chromosome | CDS | 570794 | 1011 | - | 0.232443 |
truA | BUsg193 | tRNA pseudouridine synthase A | chromosome | CDS | 216323 | 792 | + | 0.281566 |
truB | BUsg363 | tRNA pseudouridine synthase B | chromosome | CDS | 414910 | 939 | - | 0.268371 |
tsf | BUsg226 | elongation factor Ts | chromosome | CDS | 257146 | 804 | + | 0.263682 |
tufB | BUsg507 | elongation factor Tu | chromosome | CDS | 561327 | 1185 | - | 0.351899 |
tyrS | BUsg113 | tyrosyl-tRNA synthetase | chromosome | CDS | 126368 | 1269 | + | 0.247439 |
valS | BUsg354 | valyl-tRNA synthetase | chromosome | CDS | 402181 | 2883 | - | 0.245578 |
ychF | BUsg185 | probable GTP-binding protein | chromosome | CDS | 206655 | 1089 | + | 0.257117 |
yciL | BUsg271 | hypothetical 30.2 kDa protein | chromosome | CDS | 307632 | 774 | + | 0.241602 |
yfhC | BUsg246 | hypothetical 20.0 kDa protein | chromosome | CDS | 282303 | 456 | + | 0.254386 |
yhaR | BUsg359 | hypothetical protein | chromosome | CDS | 409462 | 387 | + | 0.217054 |
yjjT | BUsg319 | hypothetical 37.6 kDa protein | chromosome | CDS | 365092 | 1011 | + | 0.222552 |
yleA | BUsg426 | hypothetical 53.7 kDa protein | chromosome | CDS | 482212 | 1320 | + | 0.266667 |
yrdC | BUsg475 | hypothetical 20.8 kDa protein | chromosome | CDS | 544483 | 573 | - | 0.293194 |