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2024-05-18 10:52:51

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Escherichia coli O157:H7 str. Sakai, Sakai

Number of genes found: 191

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7 str. Sakai, Sakai
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECs3215 putative adenine-specific methylasechromosome CDS3173871 933 - 0.529475
NA ECs1709 peptidyl-tRNA hydrolasechromosome CDS1703811 585 - 0.502564
NA ECs0327 50S ribosomal protein L31chromosome CDS344922 264 - 0.462121
NA ECs4161 30S ribosomal protein S4chromosome CDS4176067 621 - 0.507246
NA ECs3939 tRNA nucleotidyl transferasechromosome CDS3941419 1239 + 0.563358
NA ECs4174 50S ribosomal protein L24chromosome CDS4182465 315 - 0.463492
NA ECs4154 RNA methyltransferasechromosome CDS4170219 1290 + 0.49845
NA ECs0939 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1023805 1128 + 0.548759
NA ECs5136 lysyl-tRNA synthetasechromosome CDS5236923 978 + 0.521472
NA ECs3948 30S ribosomal protein S21chromosome CDS3950312 216 + 0.518519
NA ECs4046 30S ribosomal protein S15chromosome CDS4053912 270 - 0.522222
NA ECs3063 elongation factor Pchromosome CDS3000379 573 + 0.500873
NA ECs3026 putative regulator proteinchromosome CDS2958367 951 - 0.539432
NA ECs3554 alanyl-tRNA synthetasechromosome CDS3543309 2631 - 0.535918
NA ECs3763 peptide chain release factor 2chromosome CDS3773333 1098 - 0.535519
NA ECs4119 ribonuclease Gchromosome CDS4131286 1470 - 0.523129
NA ECs4166 50S ribosomal protein L15chromosome CDS4179117 435 - 0.537931
NA ECs0148 glutamyl-tRNA synthetasechromosome CDS163508 927 - 0.538296
NA ECs4065 50S ribosomal protein L21chromosome CDS4075492 312 - 0.483974
NA ECs4863 50S ribosomal subunit protein L31chromosome CDS4928505 213 + 0.492958
NA ECs4191 elongation factor EF-2chromosome CDS4191306 2115 - 0.507329
NA ECs4226 tryptophanyl-tRNA synthetasechromosome CDS4224830 1005 - 0.526368
NA ECs5230 hypothetical proteinchromosome CDS5330975 1773 + 0.315849
NA ECs4164 50S ribosomal protein L36chromosome CDS4177630 117 - 0.478632
NA ECs1444 RimJchromosome CDS1484706 585 + 0.497436
NA ECs0457 queuine tRNA-ribosyltransferasechromosome CDS489766 1128 + 0.514184
NA ECs0263 peptide chain release factor 2chromosome CDS291589 501 + 0.552894
NA ECs4242 Hsp15chromosome CDS4241542 402 + 0.532338
NA ECs2624 hypothetical proteinchromosome CDS2596467 279 + 0.426523
NA ECs1607 hypothetical proteinchromosome CDS1616023 654 - 0.510703
NA ECs4173 50S ribosomal protein L5chromosome CDS4181911 540 - 0.498148
NA ECs4059 hypothetical proteinchromosome CDS4070288 294 + 0.486395
NA ECs0710 glutaminyl-tRNA synthetasechromosome CDS786116 1665 + 0.524324
NA ECs1013 asparaginyl-tRNA synthetasechromosome CDS1117056 1401 - 0.526767
NA ECs4526 putative RNA methylasechromosome CDS4568377 690 + 0.553623
NA ECs3442 ATP-dependent RNA helicasechromosome CDS3433269 1335 + 0.547566
NA ECs3966 hypothetical proteinchromosome CDS3974370 1137 - 0.542656
NA ECs3651 hypothetical proteinchromosome CDS3645402 783 - 0.537676
NA ECs0196 prolyl-tRNA synthetasechromosome CDS220388 1719 - 0.545084
NA ECs3147 polymyxin resistance protein Bchromosome CDS3103785 297 - 0.447811
NA ECs0650 RNase Ichromosome CDS725551 807 - 0.516729
NA ECs3472 30S ribosomal protein S16chromosome CDS3466057 249 - 0.514056
NA ECs4175 50S ribosomal protein L14chromosome CDS4182790 372 - 0.510753
NA ECs0170 methionine aminopeptidasechromosome CDS192198 795 - 0.498113
NA ECs4192 30S ribosomal protein S7chromosome CDS4193517 471 - 0.496815
NA ECs1605 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1614392 1107 - 0.533875
NA ECs1839 hypothetical proteinchromosome CDS1825118 621 + 0.491143
NA ECs0915 hypothetical proteinchromosome CDS1001998 1326 - 0.526395
NA ECs0699 hypothetical proteinchromosome CDS773692 1425 - 0.540351
NA ECs0151 hypothetical proteinchromosome CDS165823 531 - 0.557439
NA ECs3457 suppressor of ftsH mutationchromosome CDS3455150 981 - 0.523955
NA ECs3447 hypothetical proteinchromosome CDS3437689 1038 - 0.56262
NA ECs1194 hypothetical proteinchromosome CDS1261810 237 + 0.50211
NA ECs5289 hypothetical proteinchromosome CDS5415707 390 + 0.484615
NA ECs0994 30S ribosomal protein S1chromosome CDS1091638 1674 + 0.511947
NA ECs4909 50S ribosomal protein L7/L12chromosome CDS4989456 366 + 0.461749
NA pO157p74 transposasepO157 CDS76062 465 - 0.546237
NA ECs4183 50S ribosomal protein L23chromosome CDS4186394 303 - 0.481848
NA ECs0171 30S ribosomal protein S2chromosome CDS193360 726 + 0.513774
NA ECs4171 30S ribosomal protein S8chromosome CDS4181165 393 - 0.501272
NA ECs3075 16S pseudouridylate 516 synthasechromosome CDS3014718 696 - 0.530172
NA ECs5005 hypothetical proteinchromosome CDS5083746 873 + 0.521191
NA ECs5375 50S ribosomal protein L36chromosome CDS344782 141 - 0.432624
NA ECs5031 hypothetical proteinchromosome CDS5114823 1038 + 0.533719
NA ECs5361 hypothetical proteinchromosome CDS5497740 687 + 0.497817
NA ECs5220 hypothetical proteinchromosome CDS5326065 426 - 0.511737
NA ECs1467 50S ribosomal protein L32chromosome CDS1506462 174 + 0.54023
NA ECs3993 hypothetical proteinchromosome CDS3999350 390 - 0.517949
NA ECs1716 peptide chain release factor 1chromosome CDS1710894 1083 + 0.529086
NA ECs4148 hypothetical proteinchromosome CDS4165855 573 - 0.52356
NA ECs1256 hypothetical proteinchromosome CDS1312593 387 - 0.537468
NA ECs3471 16S rRNA-processing proteinchromosome CDS3465490 552 - 0.48913
NA ECs1330 50S ribosomal protein L31chromosome CDS1396594 264 + 0.42803
NA ECs2576 aspartyl-tRNA synthetasechromosome CDS2550680 1773 - 0.540891
NA ECs3077 50S ribosomal protein L25chromosome CDS3017447 285 + 0.498246
NA ECs2426 threonyl-tRNA synthetasechromosome CDS2400355 1929 - 0.499741
NA ECs4153 methionyl-tRNA formyltransferasechromosome CDS4169226 948 + 0.525316
NA ECs3425 putative deaminasechromosome CDS3417737 537 - 0.528864
NA ECs4170 50S ribosomal protein L6chromosome CDS4180619 534 - 0.520599
NA ECs0978 seryl-tRNA synthetasechromosome CDS1070540 1293 + 0.526682
NA ECs4043 inducible ATP-independent RNA helicasechromosome CDS4048468 1890 - 0.551852
NA ECs4163 30S ribosomal protein S13chromosome CDS4177127 357 - 0.518207
NA ECs3469 50S ribosomal protein L19chromosome CDS3464303 348 - 0.482759
NA ECs3398 putative ATP synthase beta subunitchromosome CDS3383087 738 - 0.548781
NA ECs4058 FtsJchromosome CDS4069533 630 - 0.504762
NA ECs4599 hypothetical proteinchromosome CDS4629083 480 - 0.51875
NA ECs1037 ribosome modulation factorchromosome CDS1145186 168 + 0.541667
NA ECs4193 30S ribosomal protein S12chromosome CDS4194084 375 - 0.533333
NA ECs4162 30S ribosomal protein S11chromosome CDS4176721 390 - 0.517949
NA ECs4131 ribosomal protein L11 methyltransferasechromosome CDS4144030 882 + 0.546485
NA ECs4132 putative dehydrogenasechromosome CDS4145240 966 + 0.522774
NA ECs2423 50S ribosomal protein L20chromosome CDS2399106 357 - 0.484594
NA ECs4082 putative sigma-54 modulation proteinchromosome CDS4088526 288 + 0.447917
NA ECs4550 EspFchromosome CDS4589257 747 - 0.543507
NA ECs4159 50S ribosomal protein L17chromosome CDS4174628 384 - 0.536458
NA ECs4048 ribosome-binding factor Achromosome CDS4055274 402 - 0.524876
NA ECs4185 50S ribosomal protein L3chromosome CDS4187309 630 - 0.512698
NA ECs4184 50S ribosomal protein L4chromosome CDS4186693 606 - 0.529703
NA ECs0193 hypothetical proteinchromosome CDS218177 411 + 0.545012
NA ECs5333 peptide chain release factor 3chromosome CDS5467460 1590 + 0.539623
NA ECs4169 50S ribosomal protein L18chromosome CDS4180256 354 - 0.536723
NA ECs4167 50S ribosomal protein L30chromosome CDS4179555 180 - 0.5
NA ECs0147 poly(A) polymerase Ichromosome CDS162051 1365 - 0.561172
NA ECs3479 small membrane protein Achromosome CDS3473803 153 + 0.464052
NA ECs0029 isoleucyl-tRNA synthetasechromosome CDS26802 2817 + 0.55733
NA ECs4178 50S ribosomal protein L16chromosome CDS4183771 411 - 0.515815
NA ECs2586 arginyl-tRNA synthetasechromosome CDS2561992 1734 + 0.530565
NA ECs1241 hypothetical proteinchromosome CDS1294546 1266 + 0.49684
NA ECs1841 hypothetical proteinchromosome CDS1827562 873 + 0.54181
NA ECs0456 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS488641 1071 + 0.54155
NA ECs4104 50S ribosomal protein L13chromosome CDS4113459 429 - 0.505827
NA ECs5147 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5252977 951 + 0.534175
NA ECs5156 hypothetical proteinchromosome CDS5263002 732 + 0.561475
NA ECs4103 30S ribosomal protein S9chromosome CDS4113051 393 - 0.519084
NA ECs2032 ribosomal-protein-serine N-acetyltransferasechromosome CDS2016447 297 + 0.40404
NA ECs5225 hypothetical proteinchromosome CDS5328352 396 - 0.472222
NA ECs0875 putative ATP-dependent RNA helicasechromosome CDS953239 1368 + 0.562865
NA ECs1855 hypothetical proteinchromosome CDS1843361 330 + 0.487879
NA ECs1708 putative GTP-binding proteinchromosome CDS1702603 1092 - 0.510989
NA ECs1927 ATP-dependent RNA helicasechromosome CDS1918983 1374 + 0.517467
NA ECs0062 hypothetical proteinchromosome CDS64619 660 - 0.540909
NA ECs4484 hypothetical proteinchromosome CDS4528047 474 + 0.546413
NA ECs4186 30S ribosomal protein S10chromosome CDS4187971 312 - 0.554487
NA ECs4713 ATP-dependent RNA helicasechromosome CDS4757771 1266 - 0.525276
NA ECs2425 translation initiation factor IF-3chromosome CDS2399809 543 - 0.486188
NA ECs4045 polynucleotide phosphorylasechromosome CDS4051530 2205 - 0.535147
NA ECs4511 50S ribosomal protein L33chromosome CDS4555109 168 - 0.404762
NA ECs3460 putative yhbH sigma 54 modulatorchromosome CDS3457273 342 + 0.461988
NA ECs4567 hypothetical proteinchromosome CDS4605314 378 - 0.354497
NA ECs5235 valyl-tRNA synthetasechromosome CDS5336379 2856 - 0.551471
NA ECs4467 selenocysteinyl-tRNA-specific translation factorchromosome CDS4500717 1845 - 0.56206
NA ECs0969 translation initiation factor IF-1chromosome CDS1057302 219 - 0.484018
NA ECs2290 spermidine N1-acetyltransferasechromosome CDS2255987 561 + 0.467023
NA ECs1199 putative antirepressor proteinchromosome CDS1263427 735 + 0.465306
NA ECs4176 30S ribosomal protein S17chromosome CDS4183326 255 - 0.47451
NA ECs2346 tyrosyl-tRNA synthetasechromosome CDS2315675 1275 - 0.518431
NA ECs1462 RNase Echromosome CDS1500288 3186 - 0.558067
NA ECs5128 elongation factor Pchromosome CDS5229980 567 + 0.500882
NA ECs1464 hypothetical proteinchromosome CDS1504046 960 + 0.51875
NA ECs4896 tRNA (uracil-5-)-methyltransferasechromosome CDS4971435 1101 - 0.511353
NA ECs5179 50S ribosomal protein L9chromosome CDS5279834 450 + 0.495556
NA ECs3833 periplasmic L-asparaginase IIchromosome CDS3841276 1047 - 0.528176
NA ECs4064 50S ribosomal protein L27chromosome CDS4075214 258 - 0.5
NA ECs2518 hypothetical proteinchromosome CDS2495148 393 + 0.508906
NA ECs0932 ribosomal protein S6 modification proteinchromosome CDS1017254 903 + 0.561462
NA ECs4182 50S ribosomal protein L2chromosome CDS4185555 822 - 0.53163
NA ECs4172 30S ribosomal protein S14chromosome CDS4181591 306 - 0.526144
NA ECs3143 hypothetical proteinchromosome CDS3098552 1983 + 0.515381
NA ECs4907 50S ribosomal protein L1chromosome CDS4987896 705 + 0.51773
NA ECs4512 50S ribosomal protein L28chromosome CDS4555297 237 - 0.531646
NA ECs3823 glutathione synthetasechromosome CDS3833377 948 + 0.531646
NA ECs1717 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1711976 834 + 0.557554
NA ECs2513 RNase Dchromosome CDS2488693 1128 - 0.541667
NA ECs4810 D-tyrosyl-tRNA deacylasechromosome CDS4873586 438 + 0.547945
NA ECs5126 hypothetical proteinchromosome CDS5227806 870 - 0.450575
NA ECs4638 50S ribosomal protein L34chromosome CDS4670569 141 + 0.51773
ansA ECs2474 cytoplasmic asparaginase Ichromosome CDS2451163 1017 + 0.508358
cysS ECs0588 cysteinyl-tRNA synthetasechromosome CDS647063 1386 + 0.546898
def ECs4152 peptide deformylasechromosome CDS4168702 510 + 0.466667
frr ECs0174 ribosome releasing factorchromosome CDS196216 558 + 0.508961
gltX ECs3278 glutamyl-tRNA synthetasechromosome CDS3247787 1416 - 0.530367
glyQ ECs4443 glycyl-tRNA synthetase alpha subunitchromosome CDS4470577 912 - 0.555921
glyS ECs4442 glycyl-tRNA synthetase beta subunitchromosome CDS4468498 2070 - 0.554106
hisS ECs3376 histidyl-tRNA synthetasechromosome CDS3355442 1275 - 0.546667
infB ECs4049 translation initiation factor IF-2chromosome CDS4055840 2673 - 0.534979
ksgA ECs0056 dimethyladenosine transferasechromosome CDS56584 822 - 0.53163
leuS ECs0680 leucyl-tRNA synthetasechromosome CDS753559 2583 - 0.531165
lysS ECs5111 lysyl-tRNA synthetasechromosome CDS5207650 1518 - 0.47892
lysS ECs3762 lysyl-tRNA synthetasechromosome CDS3771806 1518 - 0.523715
pheS ECs2421 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2397673 984 - 0.54065
rnpA ECs4639 ribonuclease Pchromosome CDS4670726 360 + 0.555556
rph ECs4518 ribonuclease PHchromosome CDS4559693 717 - 0.570432
rplJ ECs4908 50S ribosomal protein L10chromosome CDS4988892 498 + 0.524096
rplK ECs4906 50S ribosomal protein L11chromosome CDS4987464 429 + 0.519814
rplV ECs4180 50S ribosomal protein L22chromosome CDS4184913 333 - 0.498498
rpmC ECs4177 50S ribosomal protein L29chromosome CDS4183580 192 - 0.541667
rpmI ECs2424 50S ribosomal protein L35chromosome CDS2399515 213 - 0.483568
rpsC ECs4179 30S ribosomal protein S3chromosome CDS4184194 702 - 0.509971
rpsE ECs4168 30S ribosomal protein S5chromosome CDS4179738 504 - 0.498016
rpsF ECs5176 30S ribosomal protein S6chromosome CDS5278844 396 + 0.527778
rpsR ECs5178 30S ribosomal protein S18chromosome CDS5279565 228 + 0.526316
rpsS ECs4181 30S ribosomal protein S19chromosome CDS4185260 279 - 0.491039
rpsT ECs0026 30S ribosomal protein S20chromosome CDS25220 264 - 0.465909
rsmC ECs5329 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS5464715 1032 - 0.556202
rumA ECs3645 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3636098 1302 - 0.513057
trmD ECs3470 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3464692 768 - 0.53125
truA ECs3202 tRNA pseudouridine synthase Achromosome CDS3161177 813 - 0.557196
truB ECs4047 tRNA pseudouridine synthase Bchromosome CDS4054330 945 - 0.529101
tsf ECs0172 elongation factor Tschromosome CDS194343 852 + 0.497653
tuf ECs4190 elongation factor Tuchromosome CDS4190051 1185 - 0.531646
tuf ECs4903 elongation factor Tuchromosome CDS4984961 1185 + 0.533333