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2024-05-18 08:23:55

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Yersinia enterocolitica subsp. enterocolitica 8081, 8081

Number of genes found: 169

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Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YE1460 putative siderophore ABC transporter,ATP-binding subunitchromosome CDS1640171 789 + 0.498099
NA YE2112 putative mandelate racemase / muconate lactonizing proteinchromosome CDS2313967 972 - 0.505144
NA YE0265 hypothetical proteinchromosome CDS303638 1497 + 0.487642
NA YE2669 putative ketopantoate reductasechromosome CDS2893724 891 - 0.575758
NA YE0685 hypothetical proteinchromosome CDS790279 621 - 0.47504
NA YE3585 putative iron transport permeasechromosome CDS3900505 960 - 0.501042
NA YE0307 putative transmembrane transport proteinchromosome CDS362987 1656 - 0.471618
NA YE3438 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS3750831 1131 + 0.500442
NA YE1459 putative FecCD-family membrane transport proteinchromosome CDS1639092 1083 + 0.536473
NA YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4555157 981 + 0.523955
NA YE2659 extracellular solute-binding proteinchromosome CDS2877238 1032 + 0.502907
NA YE3305 hypothetical proteinchromosome CDS3605181 810 - 0.477778
NA YE3584 putative iron transport permeasechromosome CDS3899508 1008 - 0.462302
NA YE3399 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS3712268 597 + 0.489112
NA YE4027 putative thiamine pyrophosphate-dependent proteinchromosome CDS4385072 1941 - 0.48068
NA YE3583 putative iron ABC transporter, ATP-binding proteinchromosome CDS3898753 759 - 0.428195
NA YE1365 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1520242 909 + 0.458746
adgA YE1038 putative glutamine-dependent NADchromosome CDS1160791 1623 + 0.497844
ads YE3045 putative FolD bifunctional proteinchromosome CDS3312100 882 + 0.5
apbA YE3149 2-dehydropantoate 2-reductasechromosome CDS3423990 912 + 0.496711
apbE YE3214 thiamine biosynthesis lipoproteinchromosome CDS3499602 1023 - 0.462366
b0025 YE0615 riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase)chromosome CDS706615 939 + 0.489883
b0420 YE3155 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS3428582 1860 + 0.500538
b2688 YE0838 glutamate--cysteine ligasechromosome CDS964870 1560 + 0.480128
b4040 YE3858 4-hydroxybenzoate octaprenyltransferasechromosome CDS4208400 867 - 0.480969
b4390 YE0580 transcriptional regulator NadRchromosome CDS664901 1284 + 0.469626
bcsE YE4077 hypothetical proteinchromosome CDS4454789 1560 + 0.503205
bioA YE2908 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS3160948 1278 + 0.526604
bioB YE2907 biotin synthasechromosome CDS3159796 1053 - 0.508072
bioD YE2024 putative dethiobiotin synthetasechromosome CDS2216044 669 + 0.442451
bioD YE2904 dethiobiotin synthetasechromosome CDS3157143 648 - 0.529321
bioF YE2906 8-amino-7-oxononanoate synthasechromosome CDS3158645 1152 - 0.552083
bioR YE0275 bifunctional protein BirAchromosome CDS320743 960 + 0.432292
bisA YE2899 molybdenum cofactor biosynthesis protein Achromosome CDS3150659 981 - 0.504587
bisB YE2828 molybdopterin biosynthesis proteinchromosome CDS3075244 1236 + 0.4911
btuC YE2195 putative vitamin B12 transport system permease proteinchromosome CDS2404955 1008 - 0.49504
btuD YE2193 putative vitamin B12 transport ATP-binding proteinchromosome CDS2403548 762 - 0.468504
btuR YE4035 cob(i)alamin adenosyltransferasechromosome CDS4397017 591 - 0.480541
btuR YE2205 cob(I)alamin adenosyltransferasechromosome CDS2415949 591 + 0.467005
budB YE4017 acetolactate synthase, catabolicchromosome CDS4373792 1680 + 0.502976
cbiA YE2725 cobyrinic acid A,C-diamide synthasechromosome CDS2960425 1404 - 0.543447
cbiB YE2724 hypothetical proteinchromosome CDS2959472 957 - 0.567398
cbiC YE2723 precorrin-8X methylmutasechromosome CDS2958811 648 - 0.537037
cbiD YE2722 hypothetical proteinchromosome CDS2957648 1167 - 0.556127
cbiE YE2721 decarboxylating precorrin-6Y C5,15-methyltransferasechromosome CDS2957049 603 - 0.527363
cbiF YE2719a precorrin-4 C11-methyltransferasechromosome CDS2955706 792 - 0.555556
cbiG YE2719 hypothetical proteinchromosome CDS2954670 1056 - 0.558712
cbiH YE2718 precorrin-3 C17-methyltransferasechromosome CDS2953945 726 - 0.524793
cbiJ YE2717 precorrin-6X reductasechromosome CDS2953121 828 - 0.551932
cbiL YE2715 precorrin-2 C20-methyltransferasechromosome CDS2951617 714 - 0.543417
cbiM YE2714 hypothetical proteinchromosome CDS2950709 732 - 0.51776
cbiP YE2711 cobyric acid synthasechromosome CDS2947385 1539 - 0.51332
cbiT YE2720 precorrin-8W decarboxylasechromosome CDS2956490 570 - 0.501754
cel YE0417 octaprenyl-diphosphate synthasechromosome CDS486490 972 - 0.483539
chlA3 YE2898 molybdenum cofactor biosynthesis protein Cchromosome CDS3150148 480 - 0.495833
chlA4 YE2897 molybdopterin [mpt] converting factor, subunit 1chromosome CDS3149906 246 - 0.52439
chlA5 YE2896 molybdopterin [mpt] converting factor, subunit 2chromosome CDS3149451 456 - 0.524123
chlB YE0017 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS23718 600 - 0.428333
chlG YE0605 molybdopterin biosynthesis proteinchromosome CDS694381 588 + 0.489796
chlN YE2829 molybdopterin biosynthesis proteinchromosome CDS3076519 786 + 0.482188
citG YE2648 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS2865158 969 - 0.539732
citX YE2649 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS2866131 549 - 0.551913
coaA YE0276 pantothenate kinasechromosome CDS321742 951 - 0.419558
coaD YE0067 phosphopantetheine adenylyltransferasechromosome CDS75792 480 - 0.475
cobA YE4038 uroporphyrin-III C-methyltransferasechromosome CDS4400906 783 + 0.455939
cobA YE2748 putative uroporphyrin-III C-methyltransferasechromosome CDS2981698 768 + 0.53125
cobB YE1714 putative Sir2 family proteinchromosome CDS1912439 837 + 0.504182
cobS YE2709 cobalamin [5'-phosphate] synthasechromosome CDS2946100 747 - 0.556894
cobT YE2707 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2944349 1059 - 0.533522
cobU YE2710 cobinamide kinase and guanylyltransferasechromosome CDS2946843 546 - 0.53663
cyoE YE3145 protoheme IX farnesyltransferasechromosome CDS3420676 891 + 0.460157
cysD YE0762 sulfate adenylyltransferase subunit 2chromosome CDS888307 909 + 0.514852
cysG YE0761 siroheme synthasechromosome CDS886878 1419 + 0.554616
cysG YE3968 siroheme synthasechromosome CDS4312558 1419 + 0.525018
cysH YE0757 phosphoadenosine phosphosulfate reductasechromosome CDS883782 735 + 0.506122
dedC YE1312 putative FolC bifunctional proteinchromosome CDS1459015 1269 + 0.514578
dfp YE0062 DNA/pantothenate metabolism flavoproteinchromosome CDS72017 1188 - 0.510943
dhpS YE0429 dihydropteroate synthasechromosome CDS497847 834 + 0.491607
fadI YE0266 NAD(P)H-flavin reductasechromosome CDS305189 702 + 0.48433
fepC YE3621 iron-siderophore transport system, ATP-binding componentchromosome CDS3947905 849 + 0.526502
fepD YE3619 ferric enterobactin transport system permease proteinchromosome CDS3945828 1071 + 0.54155
fepG YE3620 iron-siderophore transport system, membrane permease componentchromosome CDS3946895 1044 + 0.539272
fhuB YE0732 ferrichrome transport system permease protein FhuBchromosome CDS849378 1998 + 0.52002
fhuC YE0730 ferrichrome transport ATP-binding protein FhuCchromosome CDS847658 795 + 0.537107
folA YE0626 dihydrofolate reductasechromosome CDS720773 462 + 0.497835
folB YE3679 putative dihydroneopterin aldolasechromosome CDS4014278 360 - 0.488889
folE YE2818 GTP cyclohydrolase Ichromosome CDS3062705 663 - 0.466063
folK YE0722 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinasechromosome CDS837102 480 - 0.5375
gsa YE0734 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS853456 1281 - 0.502732
gsh-II YE3427 glutathione synthetasechromosome CDS3741574 954 + 0.504193
hemA YE2432 glutamyl-tRNA reductasechromosome CDS2622588 1263 - 0.511481
hemB YE0263 delta-aminolevulinic acid dehydratasechromosome CDS301770 1023 + 0.480938
hemC YE0187 porphobilinogen deaminasechromosome CDS222463 942 - 0.516985
hemD YE0186 uroporphyrinogen-III synthasechromosome CDS221720 747 - 0.514056
hemE YE0297 uroporphyrinogen decarboxylasechromosome CDS347286 1068 + 0.504682
hemF YE1168 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS1307152 927 - 0.495146
hemH YE3088 ferrochelatasechromosome CDS3358610 969 - 0.470588
hemN YE0024 oxygen-independent coproporphyrinogen III oxidasechromosome CDS32467 1374 + 0.458515
hemN YE0335 putative coproporphyrinogen III oxidasechromosome CDS398005 1314 - 0.500761
hemU YE0328 hemin transport system permease protein HmuUchromosome CDS391312 1005 - 0.555224
hemV YE0327 hemin transport system ATP-binding proteinchromosome CDS390519 801 - 0.54432
hemY YE0184 putative protoheme IX biogenesis proteinchromosome CDS219361 1200 - 0.523333
hslI YE2098 D-lactate dehydrogenasechromosome CDS2296932 993 + 0.472306
htrP YE3669 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4001890 654 - 0.503058
ilvB YE2060 putative acetolactate synthase large subunitchromosome CDS2254911 1683 + 0.507427
ilvC YE0155 ketol-acid reductoisomerasechromosome CDS184071 1479 + 0.48952
ilvE YE0150 branched-chain amino acid aminotransferasechromosome CDS176815 927 + 0.509169
ilvG YE0148 acetolactate synthase isozyme II large subunitchromosome CDS174892 1647 + 0.523983
ilvI YE0658 acetolactate synthase isozyme III large subunitchromosome CDS761712 1728 + 0.499421
ipdC YE1222 indole-3-pyruvate decarboxylasechromosome CDS1362066 1665 + 0.509309
irp9 YE2612 putative salicylate synthetasechromosome CDS2812607 1305 - 0.555556
ispA YE3154 geranyltranstransferasechromosome CDS3427608 921 + 0.523344
kbl YE0073 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS82105 1212 + 0.489274
lip YE3008 lipoic acid synthetasechromosome CDS3279468 966 + 0.485507
lipB YE3007 lipoate-protein ligase Bchromosome CDS3278566 714 + 0.501401
lplA YE2184 putative lipoate-protein ligase Achromosome CDS2393419 1017 - 0.480826
menA YE0103 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS112342 855 - 0.502924
menC YE1378 putative O-succinylbenzoate-CoA synthasechromosome CDS1537214 972 + 0.559671
menD YE1375 menaquinone biosynthesis proteinchromosome CDS1533849 1674 + 0.553763
menF YE1373 menaquinone-specific isochorismate synthasechromosome CDS1532262 1359 + 0.491538
menG YE0102 S-adenosylmethionine:2-demethylmenaquinone methyltransferasechromosome CDS111726 486 - 0.454733
metK YE3421 S-adenosylmethionine synthetasechromosome CDS3736915 1155 + 0.490909
mobB YE0016 probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS23194 528 - 0.407197
nadA YE2928 quinolinate synthetase Achromosome CDS3183947 1062 - 0.510358
nadB YE1009 L-aspartate oxidasechromosome CDS1128691 1638 - 0.493284
nadC YE0691 nicotinate-nucleotide pyrophosphorylasechromosome CDS795861 909 - 0.49615
nadD YE2999 putative nicotinate-nucleotide adenylyltransferasechromosome CDS3270595 663 + 0.484163
pabA YE3958 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS4299826 576 - 0.487847
pabB YE1781 para-aminobenzoate synthase component Ichromosome CDS1976289 1371 - 0.495988
pabC YE1638 4-amino-4-deoxychorismate lyasechromosome CDS1843200 825 + 0.506667
panB YE0720 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS836068 801 - 0.514357
panC YE0719 pantoate--beta-alanine ligasechromosome CDS835040 855 - 0.505263
panD YE0718 aspartate 1-decarboxylase precursorchromosome CDS834502 381 - 0.485564
panF YE3814 sodium/pantothenate symporterchromosome CDS4160685 1455 + 0.514777
pdxA YE0631 pyridoxal phosphate biosynthetic proteinchromosome CDS723477 996 - 0.488956
pdxH YE2140 pyridoxamine 5'-phosphate oxidasechromosome CDS2341125 654 - 0.492355
pdxJ YE1020 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1139955 732 + 0.509563
pdxY YE2138 pyridoxamine kinasechromosome CDS2338666 861 - 0.478513
pncB YE1565 putative nicotinate phosphoribosyltransferasechromosome CDS1761052 1206 - 0.460199
pnuC YE2927 intergral membrane NMN transport protein PnuCchromosome CDS3182971 729 - 0.465021
poxB YE1507 pyruvate dehydrogenasechromosome CDS1682410 1722 - 0.511034
pufX YE1394 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1558895 729 - 0.486968
putP YE1934 proline permeasechromosome CDS2113011 1485 + 0.490236
ribA YE1965 GTP cyclohydrolase IIchromosome CDS2146643 591 - 0.492386
ribC YE2162 riboflavin synthase alpha chainchromosome CDS2363153 651 - 0.456221
ribD YE3161 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS3433556 1110 - 0.541441
ribE YE3160 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS3432951 471 - 0.47983
serC YE1537 phosphoserine aminotransferasechromosome CDS1724940 1086 + 0.492634
sfuA YE1241 iron(III)-binding periplasmic proteinchromosome CDS1382354 1017 - 0.481809
sfuB YE1240 iron(III)-transport system permeasechromosome CDS1380681 1587 - 0.52426
thiC YE0293 thiamine biosynthesis protein ThiCchromosome CDS343427 1887 - 0.503445
thiD YE1088 putative phosphomethylpyrimidine kinasechromosome CDS1219890 801 + 0.534332
thiE YE0292 thiamine-phosphate pyrophosphorylasechromosome CDS342760 612 - 0.526144
thiF YE0291 thiamine biosynthesis proteinchromosome CDS341994 783 - 0.526181
thiH YE0289 thiamine biosynthesis protein ThiHchromosome CDS339869 1131 - 0.5084
thiI YE3151 thiamine biosynthesis proteinchromosome CDS3425622 1452 - 0.46832
thiL YE3158 thiamine-monophosphate kinasechromosome CDS3431440 990 - 0.5
thiM YE3599 hydroxyethylthiazole kinasechromosome CDS3920539 783 - 0.555556
thiP YE0641 thiamine transport system permease proteinchromosome CDS737324 1548 - 0.530362
thiS YE0290A thiamine biosynthesis proteinchromosome CDS341782 216 - 0.49537
trpE YE2209 anthranilate synthase component Ichromosome CDS2420029 1563 + 0.53167
trpG YE2210 anthranilate synthase component IIchromosome CDS2421606 591 + 0.527919
ubiC YE3859 putative chorismate--pyruvate lyasechromosome CDS4209291 507 - 0.524655
ubiE YE0256 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS295958 756 + 0.457672
ubiF YE2984 putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS3253760 1182 - 0.51692
ubiH YE3395 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3707997 1170 - 0.545299
ubiX YE1317 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1463680 573 + 0.488656
visC YE3394 putative monooxygenasechromosome CDS3706695 1215 - 0.535802
ygcM YE0754 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS879523 360 - 0.480556