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2024-05-18 14:26:26

Gene list

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COG category: Amino acid transport and metabolism
Organism: Shigella flexneri 2a str. 2457T, 2457T

Number of genes found: 374

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Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S2501 aspartate aminotransferasechromosome CDS2395130 1218 + 0.504105
NA S2789 putative tail fiber proteinchromosome CDS2685470 987 - 0.511651
NA S1542 putative repressor proteinchromosome CDS1502389 567 - 0.412698
NA S2535 hypothetical proteinchromosome CDS2429284 2067 + 0.521529
NA S1563 putative transport proteinchromosome CDS1520895 1380 + 0.49058
NA S0823 putative transport proteinchromosome CDS809732 1539 + 0.521118
NA S2471 hypothetical proteinchromosome CDS2364796 669 + 0.505232
NA S0824 putative transport system permease proteinchromosome CDS811288 921 + 0.533116
NA S0841 putative DEOR-type transcriptional regulatorchromosome CDS827704 1209 - 0.544251
NA S0287 putative Rhs-family proteinchromosome CDS285407 408 + 0.541667
NA S1873 putative transport proteinchromosome CDS1815194 897 + 0.535117
NA S3363 putative L-serine deaminasechromosome CDS3240909 1365 - 0.534066
NA S1751 hypothetical proteinchromosome CDS1686236 822 + 0.515815
NA S1874 putative ATP-binding component of a transport systemchromosome CDS1816087 987 + 0.541033
NA S1852 putative transport system permease proteinchromosome CDS1791003 1146 + 0.446771
NA S2360 putative oxidoreductasechromosome CDS2236278 1239 + 0.513317
NA S2641 hypothetical proteinchromosome CDS2529811 660 - 0.563636
NA S0255 hypothetical proteinchromosome CDS259881 345 - 0.443478
NA S1384 putative glutamine synthetasechromosome CDS1353627 1419 - 0.532065
NA S2996 putative transport proteinchromosome CDS2874438 1353 - 0.522542
NA S0825 putative transport system permease proteinchromosome CDS812211 912 + 0.528509
NA S2567 sucrose-6 phosphate hydrolasechromosome CDS2364743 336 + 0.532738
NA S4552 transport of lysine/cadaverinechromosome CDS4456077 1053 - 0.489079
NA S3122 putative oxidoreductasechromosome CDS3005496 990 - 0.523232
NA S1758 putative arginine/ornithine antiporterchromosome CDS1693832 1383 + 0.532176
NA S2649 putative amino acid antiporterchromosome CDS2536123 1461 + 0.399042
NA S2533 hypothetical proteinchromosome CDS2426511 1179 - 0.569126
NA S1513 putative transport proteinchromosome CDS1474798 1485 - 0.513131
NA S1853 putative amino acid/amine transport proteinchromosome CDS1792442 1161 + 0.459087
NA S2577 hypothetical proteinchromosome CDS2471457 1695 - 0.464897
NA S1424 putative transport periplasmic proteinchromosome CDS1392226 1635 + 0.477676
NA S1906 putative transport system permease proteinchromosome CDS1849313 795 - 0.543396
NA S2648 hypothetical proteinchromosome CDS2535659 213 + 0.492958
NA S0500 hypothetical proteinchromosome CDS507702 252 + 0.47619
NA S2655 hypothetical proteinchromosome CDS2541598 408 - 0.490196
NA S2894 hypothetical proteinchromosome CDS2776847 960 + 0.548958
NA S2141 hypothetical bacteriophage proteinchromosome CDS2038773 480 + 0.54375
NA S1562 putative oxidoreductasechromosome CDS1519792 1077 + 0.498607
NA S1842 selenocysteine lyasechromosome CDS1779175 1221 - 0.551188
NA S4827 hypothetical proteinchromosome CDS3679197 1146 - 0.397906
NA S2654 hypothetical proteinchromosome CDS2541106 480 - 0.497917
NA S4825 hypothetical proteinchromosome CDS3074404 285 - 0.470175
NA S1596 hypothetical proteinchromosome CDS1553075 1032 + 0.562016
NA S2583 hypothetical proteinchromosome CDS2478246 1239 - 0.551251
NA S1212 hypothetical bacteriophage proteinchromosome CDS1180340 303 + 0.508251
NA S3053 putative transporter proteinchromosome CDS2941000 1119 + 0.436997
NA S1915 hypothetical proteinchromosome CDS1856431 342 - 0.461988
NA S2896 hypothetical proteinchromosome CDS2778150 738 + 0.5271
NA S3019 hypothetical proteinchromosome CDS2898463 1206 + 0.556385
adiA S3624 biodegradative arginine decarboxylasechromosome CDS3501868 2268 - 0.524691
ampG S0384 beta-lactamase induction signal transducer AmpGchromosome CDS386970 1476 - 0.542683
ansA S1571 cytoplasmic asparaginase Ichromosome CDS1529251 1017 - 0.508358
ansB S3157 periplasmic L-asparaginase IIchromosome CDS3033957 1047 - 0.52531
araE S3049 low-affinity L-arabinose transport system proton symport proteinchromosome CDS2935806 1419 - 0.512333
arcC S0460 carbamate kinasechromosome CDS468821 894 + 0.571588
argA S3026 N-acetylglutamate synthasechromosome CDS2904258 1332 + 0.527027
argB S3710 acetylglutamate kinasechromosome CDS3601673 774 - 0.550388
argC S3711 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS3602457 1005 - 0.534328
argD S4385 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase proteinchromosome CDS4313314 1221 + 0.543817
argE S3712 acetylornithine deacetylasechromosome CDS3603615 1152 + 0.513889
argG S3430 argininosuccinate synthasechromosome CDS3301936 1344 + 0.523065
argH S3709 argininosuccinate lyasechromosome CDS3600239 1374 - 0.560408
argI S4496 ornithine carbamoyltransferasechromosome CDS4401353 1014 + 0.504931
argT S2521 lysine-, arginine-, ornithine-binding periplasmic proteinchromosome CDS2414578 783 - 0.498084
aroA S0967 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS945133 1284 + 0.507788
aroB S4355 3-dehydroquinate synthasechromosome CDS4285004 1089 + 0.543618
aroC S2540 chorismate synthasechromosome CDS2433968 1086 - 0.566298
aroD S1855 3-dehydroquinate dehydratasechromosome CDS1794511 759 + 0.509881
aroE S3537 shikimate 5-dehydrogenasechromosome CDS3402985 819 - 0.492063
aroE S1854 shikimate 5-dehydrogenasechromosome CDS1793614 867 + 0.477509
aroF S2838 3-deoxy-7-phosphoheptulonate synthasechromosome CDS2733365 1071 - 0.512605
aroG S0558 3-deoxy-7-phosphoheptulonate synthasechromosome CDS567381 1053 - 0.512821
aroH S1644 3-deoxy-7-phosphoheptulonate synthasechromosome CDS1595903 1047 - 0.529131
aroK S4354 shikimate kinase Ichromosome CDS4284225 723 + 0.485477
aroL S0332 shikimate kinase IIchromosome CDS334782 525 + 0.52
aroP S0111 aromatic amino acid transport proteinchromosome CDS117929 1374 - 0.526929
artI S0859 arginine 3rd transport system periplasmic binding proteinchromosome CDS843808 732 - 0.489071
artJ S0856 arginine 3rd transport system periplasmic binding proteinchromosome CDS841394 732 - 0.456284
artM S0857 arginine 3rd transport system permease proteinchromosome CDS842417 669 - 0.527653
artP S0860 ATP-binding component of 3rd arginine transport systemchromosome CDS844557 729 - 0.526749
artQ S0858 arginine 3rd transport system permease proteinchromosome CDS843085 717 - 0.542538
asd S4307 aspartate-semialdehyde dehydrogenasechromosome CDS4225138 1104 + 0.540761
asnA S3944 asparagine synthetase AsnAchromosome CDS3837879 993 - 0.564955
asnB S0630 asparagine synthetase Bchromosome CDS648776 1665 + 0.515916
aspA S4560 aspartate ammonia-lyase (aspartase)chromosome CDS4462704 1482 - 0.489204
aspC S0989 aspartate aminotransferasechromosome CDS973712 1191 - 0.518052
avtA S4153 valine--pyruvate transaminasechromosome CDS4052685 1254 - 0.523923
bcr S2398 bicyclomycin resistance protein; transmembrane proteinchromosome CDS2281226 1191 - 0.530647
brnQ S0346 branched-chain amino-acid transport system II carrier proteinchromosome CDS348233 1320 + 0.555303
cadB S4478 chromosome pseudo4383674 1053 - 0.489079
carA S0031 carbamoyl-phosphate synthase small subunitchromosome CDS28567 1149 + 0.534378
carB S0032 carbamoyl-phosphate synthase large subunitchromosome CDS29733 3222 + 0.557107
cmr S0838 chloramphenicol resistance pump Cmrchromosome CDS825252 1227 + 0.521597
cycA S4543 transport protein for D-alanine, D-serine, and glycinechromosome CDS4448896 1413 - 0.527955
cysD S2968 sulfate adenylyltransferase subunit 2chromosome CDS2842262 909 - 0.537954
cysE S4122 serine acetyltransferasechromosome CDS4020059 822 + 0.53163
cysH S2971 phosphoadenosine phosphosulfate reductasechromosome CDS2846306 735 - 0.514286
cysK S2615 cysteine synthase A, O-acetylserine sulfhydrolase Achromosome CDS2507843 972 + 0.501029
cysM S2622 cysteine synthase B, O-acetylserine sulfhydrolase Bchromosome CDS2514109 912 - 0.559211
cysZ S2614 putative sulfate transport protein CysZchromosome CDS2506897 762 + 0.498688
dadA S1266 D-amino acid dehydrogenase small subunitchromosome CDS1224163 1299 + 0.555812
dapA S2671 dihydrodipicolinate synthasechromosome CDS2565073 879 - 0.516496
dapB S0030 dihydrodipicolinate reductasechromosome CDS27290 822 + 0.530414
dapD S0159 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferasechromosome CDS175554 825 - 0.528485
dapE S2665 succinyl-diaminopimelate desuccinylasechromosome CDS2557798 1128 + 0.531028
dapF S3869 diaminopimelate epimerasechromosome CDS3766019 828 - 0.550725
dcp S1682 dipeptidyl carboxypeptidase IIchromosome CDS1628062 2046 + 0.5
dgoT S3998 D-galactonate transport proteinchromosome CDS3892275 1338 - 0.530643
dppA S4191 dipeptide transport proteinchromosome CDS4096282 1608 + 0.518657
dppB S4192 dipeptide transport system permease protein 1chromosome CDS4098197 1020 + 0.561765
dppC S4193 dipeptide transport system permease protein 2chromosome CDS4099226 903 + 0.589147
dppD S4194 putative ATP-binding component of dipeptide transport systemchromosome CDS4100139 984 + 0.558943
dppF S4195 putative ATP-binding component of dipeptide transport systemchromosome CDS4101119 1005 + 0.558209
dsdA S2570 D-serine dehydratasechromosome CDS2460404 1329 + 0.505643
edd S1927 phosphogluconate dehydratasechromosome CDS1865860 1812 - 0.535872
emrB S2900 multidrug resistant protein emrBchromosome CDS2781149 1539 + 0.560754
emrD S3980 multidrug resistance protein Dchromosome CDS3875818 1152 + 0.574653
emrY S2571 multidrug resistance protein Ychromosome CDS2461840 1539 - 0.417804
exuT S3340 transport protein of hexuronateschromosome CDS3224314 1299 + 0.543495
flhE S2012 flagellar proteinchromosome CDS1934087 339 - 0.557522
fsr S0431 fosmidomycin resistance proteinchromosome CDS439698 1221 - 0.523342
gabP S2875 transport permease protein of gamma-aminobutyratechromosome CDS2761448 1401 + 0.512491
gabT S2874 4-aminobutyrate aminotransferasechromosome CDS2760083 1128 + 0.591312
gadA S4173 glutamate decarboxylase isozymechromosome CDS4078290 1401 - 0.538901
gadB S1867 glutamate decarboxylase isozymechromosome CDS1807985 1401 + 0.538901
galP S3138 galactose:proton symporter, MFS familychromosome CDS3018815 1356 + 0.533186
gatD S2277 galactitol-1-phosphate dehydrogenasechromosome CDS2159598 1041 - 0.483189
gcvH S3089 glycine cleavage system protein Hchromosome CDS2975163 390 - 0.523077
gcvP S3088 glycine dehydrogenasechromosome CDS2972171 2874 - 0.559847
gcvT S3090 aminomethyltransferasechromosome CDS2975576 1095 - 0.542466
ggt S4298 gamma-glutamyltranspeptidasechromosome CDS4216590 1743 + 0.550775
glnA S3806 glutamine synthetasechromosome CDS3702610 1410 + 0.528369
glnB S2772 regulatory protein P-II for glutamine synthetasechromosome CDS2665528 339 - 0.510324
glnH S0804 glutamine ABC transporter periplasmic-binding proteinchromosome CDS787477 747 - 0.485944
glnK S0401 nitrogen regulatory protein P-II 2chromosome CDS407492 339 + 0.510324
glnP S0803 glutamine ABC transporter permease componentchromosome CDS786679 660 - 0.536364
glnQ S0802 glutamine ABC transporter ATP-binding componentchromosome CDS785960 723 - 0.543568
gloA S1810 lactoylglutathione lyasechromosome CDS1745529 408 + 0.512255
glpB S2457 anaerobic glycerol-3-phosphate dehydrogenase subunit Bchromosome CDS2350476 1260 + 0.557936
gltB S3470 glutamate synthase, large subunitchromosome CDS3337901 4569 + 0.57146
gltD S3471 glutamate synthase, small subunitchromosome CDS3342482 1419 + 0.551092
gltJ S0649 glutamate/aspartate transport system permeasechromosome CDS660083 741 + 0.530364
gltK S0650 glutamate/aspartate transport system permeasechromosome CDS660823 675 + 0.502222
gltL S0651 ATP-binding protein of glutamate/aspartate transport systemchromosome CDS661497 726 + 0.523416
gltS S4076 glutamate transport proteinchromosome CDS3976411 1206 + 0.538972
glyA S2770 serine hydroxymethyltransferasechromosome CDS2662713 1254 - 0.5311
gntP S4455 gluconate transport system permease 3chromosome CDS4364235 1344 + 0.529018
gntT S4327 high-affinity transport permease for gluconatechromosome CDS4253505 1317 - 0.537585
gntU S4304 low-affinity gluconate transport permease proteinchromosome CDS4223019 1278 + 0.558685
goaG S1389 4-aminobutyrate aminotransferasechromosome CDS1359562 1266 + 0.57188
gsp S3236 glutathionylspermidine synthetase/amidasechromosome CDS3120643 1860 - 0.522581
hcaT S2755 MFS (major facilitator superfamily) transporterchromosome CDS2645147 1140 - 0.564035
hisA S2207 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasechromosome CDS2084376 738 + 0.562331
hisB S2205 imidazole glycerol-phosphate dehydratase/histidinol phosphatasechromosome CDS2082719 1068 + 0.531835
hisC S2204 histidinol-phosphate aminotransferasechromosome CDS2081649 1071 + 0.548086
hisD S2203 histidinol dehydrogenasechromosome CDS2080348 1305 + 0.577778
hisF S2208 imidazole glycerol phosphate synthase subunit HisFchromosome CDS2085095 777 + 0.519949
hisG S2202 ATP phosphoribosyltransferasechromosome CDS2079443 900 + 0.545556
hisH S2206 imidazole glycerol phosphate synthase subunit HisHchromosome CDS2083786 591 + 0.556684
hisI S2209 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase proteinchromosome CDS2085865 612 + 0.521242
hisJ S2520 histidine-binding periplasmic protein of high-affinity histidine transport systemchromosome CDS2413575 783 - 0.49553
hisM S2518 histidine transport, membrane protein Mchromosome CDS2412086 717 - 0.500697
hisP S2517 ATP-binding component of histidine transportchromosome CDS2411305 774 - 0.516796
hisQ S2519 histidine transport system permease proteinchromosome CDS2412799 687 - 0.534207
hpaF S4651 5-carboxymethyl-2-hydroxymuconate delta-isomerasechromosome CDS4545266 381 - 0.496063
hpaX S4648 putative 4-hydroxyphenylacetate permeasechromosome CDS4542204 1356 - 0.463864
ilvA S3912 threonine dehydratasechromosome CDS3806976 1545 - 0.586408
ilvB S3978 acetolactate synthase large subunitchromosome CDS3872959 1689 - 0.560687
ilvC S3910 ketol-acid reductoisomerasechromosome CDS3804464 1476 - 0.53523
ilvD S3913 dihydroxy-acid dehydratasechromosome CDS3808523 1851 - 0.56456
ilvE S3914 branched-chain amino acid aminotransferasechromosome CDS3810438 930 - 0.544086
ilvG S3917 acetolactate synthase II large subunitchromosome CDS3811647 1647 - 0.545841
ilvH S0075 acetolactate synthase small subunitchromosome CDS84684 492 + 0.502033
ilvI S0074 acetolactate synthase III large subunitchromosome CDS82873 1809 + 0.524599
ilvN S3977 acetolactate synthase small subunitchromosome CDS3872665 291 - 0.484536
imm S4057 putative membrane transport proteinchromosome CDS3954544 1194 + 0.569514
kgtP S2822 alpha-ketoglutarate permeasechromosome CDS2714933 1299 - 0.487298
ldcC S0179 lysine decarboxylase 2chromosome CDS200110 2142 + 0.507937
leuA S0071 2-isopropylmalate synthasechromosome CDS79286 1572 - 0.527354
leuB S0070 3-isopropylmalate dehydrogenasechromosome CDS78195 1095 - 0.552511
leuC S0069 isopropylmalate isomerase large subunitchromosome CDS76792 1401 - 0.553176
leuD S0068 isopropylmalate isomerase small subunitchromosome CDS76176 606 - 0.521452
livF S4291 ATP-binding component of leucine transportchromosome CDS4210058 714 + 0.57423
livG S4290 ATP-binding component of high-affinity branched-chain amino acid transport systemchromosome CDS4209289 768 + 0.539062
livH S4288 high-affinity branched-chain amino acid transport protein, membrane componentchromosome CDS4207092 927 + 0.557713
livJ S4285 high-affinity amino acid transport protein, periplasmic binding proteinchromosome CDS4203769 1161 + 0.537468
livK S4287 high-affinity leucine-specific transport protein, periplasmic binding proteinchromosome CDS4205935 1110 + 0.544144
livM S4289 high-affinity branched-chain amino acid transport protein, membrane componentchromosome CDS4208015 1278 + 0.562598
lysA S3046 diaminopimelate decarboxylasechromosome CDS2932679 1263 - 0.528899
lysC S3550 aspartate kinase IIIchromosome CDS3413860 1350 - 0.543704
lysP S2370 lysine-specific permeasechromosome CDS2248995 1470 - 0.530612
malY S1779 cystathionine beta-lyase; maltose regulon modulatorchromosome CDS1717311 1173 + 0.512361
metA S3651 homoserine O-succinyltransferasechromosome CDS3539458 930 - 0.504301
metB S3730 cystathionine gamma-synthasechromosome CDS3628308 1161 - 0.549526
metC S3256 cystathionine beta-lyasechromosome CDS3136340 1188 + 0.516835
metE S3848 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferasechromosome CDS3744856 2262 - 0.557471
metF S3728 5,10-methylenetetrahydrofolate reductasechromosome CDS3624634 891 - 0.523008
metH S3645 B12-dependent methionine synthasechromosome CDS3527156 3684 - 0.557275
metJ S3731 transcriptional repressor protein MetJchromosome CDS3629745 318 + 0.518868
metL S3729 bifunctional aspartate kinase II/homoserine dehydrogenase IIchromosome CDS3625873 2433 - 0.581176
mtr S3419 tryptophan-specific transport proteinchromosome CDS3287896 1245 - 0.53494
nanA S3478 N-acetylneuraminate lyasechromosome CDS3349862 894 - 0.521253
nanT S3477 putative sialic acid transporterchromosome CDS3348262 1521 - 0.552268
nikA S4269 periplasmic binding protein for nickelchromosome CDS4188238 1575 - 0.533968
nikB S4268 transport of nickel, membrane proteinchromosome CDS4187294 945 - 0.579894
nikC S4267 transport of nickel, membrane proteinchromosome CDS4186464 834 - 0.603118
nikD S4266 ATP-binding protein of nickel transport systemchromosome CDS4185700 765 - 0.589543
nikE S4265 ATP-binding protein of nickel transport systemchromosome CDS4184897 807 - 0.557621
nupG S3164 permease protein for nucleosideschromosome CDS3039941 1305 + 0.495785
oppA S1330 periplasmic oligopeptide binding proteinchromosome CDS1296130 1632 + 0.479167
oppB S1331 oligopeptide permease ABC transporter membrane componentchromosome CDS1297847 921 + 0.465798
oppC S1332 oligopeptide transport permease proteinchromosome CDS1298782 909 + 0.529153
oppD S1333 oligopeptide transporter ATP-binding componentchromosome CDS1299702 1014 + 0.514793
oppF S1334 ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1300712 1005 + 0.518408
ordL S1388 probable oxidoreductasechromosome CDS1358244 1281 + 0.576893
pabA S4384 para-aminobenzoate synthase component IIchromosome CDS4312665 564 + 0.537234
pabB S1531 para-aminobenzoate synthase component Ichromosome CDS1491052 1362 - 0.507342
pabC S1180 4-amino-4-deoxychorismate lyasechromosome CDS1143908 810 + 0.506173
pdxB S2531 erythronate-4-phosphate dehydrogenasechromosome CDS2424284 1137 - 0.5365
pepA S4490 leucyl aminopeptidasechromosome CDS4393843 1512 + 0.546958
pepB S2742 aminopeptidase Bchromosome CDS2633816 1284 - 0.560748
pepD S0306 aminoacyl-histidine dipeptidase (peptidase D)chromosome CDS305140 1458 - 0.514403
pepE S3643 peptidase Echromosome CDS3524525 690 + 0.542029
pepN S0993 aminopeptidase Nchromosome CDS979813 2616 + 0.534404
pepP S3093 proline aminopeptidase P IIchromosome CDS2979518 1326 - 0.536199
pepQ S3829 proline dipeptidasechromosome CDS3727869 1332 - 0.535285
pepT S1209 peptidase Tchromosome CDS1175192 1227 + 0.493888
pheA S2836 chorismate mutase-P and prephenate dehydratasechromosome CDS2731030 1161 + 0.490095
pheP S0491 phenylalanine transport protein phePchromosome CDS499989 1377 + 0.527233
potA S1208 putrescine/spermidine ABC transporter ATPasechromosome CDS1173806 1137 - 0.508355
potB S1207 spermidine/putrescine ABC transporter membrane componentchromosome CDS1172965 828 - 0.513285
potC S1206 spermidine/putrescine ABC transporter membrane componentchromosome CDS1172174 795 - 0.499371
potD S1205 spermidine/putrescine ABC transporter periplasmic substrate-binding componentchromosome CDS1171131 1047 - 0.512894
potE S0615 putrescine transport proteinchromosome CDS631391 1320 + 0.503788
potF S0850 periplasmic putrescine-binding protein; permease proteinchromosome CDS835358 1113 + 0.507637
potG S0851 ATP-binding component of putrescine transport systemchromosome CDS836484 1215 + 0.557202
potH S0852 putrescine transport protein; permeasechromosome CDS837708 954 + 0.506289
potI S0853 putrescine transport protein; permeasechromosome CDS838658 846 + 0.553191
poxB S0867 pyruvate dehydrogenasechromosome CDS853384 1719 - 0.536358
prlC S4239 oligopeptidase Achromosome CDS4152980 2043 + 0.552129
proA S0314 gamma-glutamyl phosphate reductasechromosome CDS312385 1254 + 0.543062
proB S0313 gamma-glutamyl kinasechromosome CDS311270 1104 + 0.557971
proC S0330 pyrroline-5-carboxylate reductasechromosome CDS333212 810 - 0.548148
proP S3618 low-affinity transport protein; proline permease IIchromosome CDS3494116 1503 + 0.499002
proV S2891 glycine betaine/L-proline transport ATP-binding proteinchromosome CDS2773346 1203 + 0.489609
proW S2892 glycine betaine/L-proline transport system permease proteinchromosome CDS2774541 1065 + 0.58216
proX S2893 glycine betaine/L-proline transport system permease proteinchromosome CDS2775663 993 + 0.526687
proY S0347 proline permease transport proteinchromosome CDS349628 1374 + 0.525473
prsA S1294 ribose-phosphate pyrophosphokinasechromosome CDS1257524 948 - 0.529536
ptrB S1921 protease IIchromosome CDS1859845 2061 - 0.499272
rfc S2219 O-antigen polymerasechromosome CDS2093827 1149 - 0.273281
sapA S1381 peptide transport periplasmic proteinchromosome CDS1349605 1644 - 0.541971
sdaA S1529 L-serine deaminasechromosome CDS1488922 1365 - 0.537729
sdaB S3006 L-serine dehydratase (deaminase), L-SD2chromosome CDS2884704 1368 + 0.546053
sdaC S3005 probable serine transporterchromosome CDS2883357 1290 + 0.524806
selA S4139 selenocysteine synthasechromosome CDS4039671 1392 + 0.563937
selD S1574 selenophosphate synthetasechromosome CDS1533119 1044 + 0.552682
serA S3098 D-3-phosphoglycerate dehydrogenasechromosome CDS2983573 1233 - 0.52717
serB S4691 3-phosphoserine phosphatasechromosome CDS4582652 969 + 0.568627
serC S0966 phosphoserine aminotransferasechromosome CDS943974 1089 + 0.504132
solA S1143 sarcosine oxidase-like proteinchromosome CDS1110118 1119 - 0.524576
sorE S3642 putative L-sorbose-1-P-reductasechromosome CDS3522914 1230 + 0.528455
speA S3133 arginine decarboxylasechromosome CDS3014414 1977 - 0.538189
speB S3129 agmatinasechromosome CDS3012114 921 - 0.555918
speC S3165 ornithine decarboxylase isozymechromosome CDS3041294 2196 - 0.520036
speD S0119 S-adenosylmethionine decarboxylase proenzymechromosome CDS132525 795 - 0.459119
speE S0120 spermidine synthasechromosome CDS133335 867 - 0.509804
tdcB S3369 threonine dehydratasechromosome CDS3247663 990 - 0.460606
tdcC S3368 anaerobically inducible permease for L-threonine and L-serinechromosome CDS3246310 1332 - 0.496246
tdh S4111 L-threonine 3-dehydrogenasechromosome CDS4011400 1026 + 0.524366
thrA S0002 bifunctional aspartokinase I/homeserine dehydrogenase Ichromosome CDS336 2463 + 0.53309
thrB S0003 homoserine kinasechromosome CDS2800 933 + 0.562701
thrC S0004 threonine synthasechromosome CDS3733 1287 + 0.530692
tnaA S4017 tryptophanasechromosome CDS3911341 1416 + 0.503531
tnaB S4018 low-affinity tryptophan permeasechromosome CDS3912847 1248 + 0.466346
trpA S1349 tryptophan synthase subunit alphachromosome CDS1312603 807 - 0.539033
trpB S1350 tryptophan synthase subunit betachromosome CDS1313409 1194 - 0.546064
trpC S1351 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerasechromosome CDS1314614 1362 - 0.524229
trpD S1352 anthranilate phosphoribosyltransferasechromosome CDS1315976 1596 - 0.561404
trpE S1353 anthranilate synthase component Ichromosome CDS1317571 1563 - 0.539987
tyrA S2837 chorismate mutase-T and prephenate dehydrogenasechromosome CDS2732233 1122 - 0.520499
tyrB S3579 aspartate aminotransferasechromosome CDS3448962 1194 + 0.524288
tyrP S2046 tyrosine-specific transport proteinchromosome CDS1962619 1212 + 0.509076
tyrR S1412 regulatory protein TyrRchromosome CDS1381480 1542 + 0.520104
usg S2530 hypothetical proteinchromosome CDS2423205 1014 - 0.554241
wcaB S2246 putative transferasechromosome CDS2120292 489 - 0.550102
xasA S1868 acid sensitivity protein, putative transporterchromosome CDS1809541 1536 + 0.483073
xylE S3557 xylose-proton symportorchromosome CDS3422719 1476 - 0.485772
yaaU S0044 putative transport proteinchromosome CDS44609 1395 + 0.522581
yabM S0067 putative transport proteinchromosome CDS74949 1179 + 0.480916
yaeD S0193 hypothetical proteinchromosome CDS213217 576 + 0.501736
yaeR S0180 hypothetical proteinchromosome CDS202281 417 + 0.508393
ybaS S0437 glutaminasechromosome CDS447762 933 + 0.533762
ybaT S0438 putative amino acid/amine transport proteinchromosome CDS448697 1293 + 0.531322
ybdA S0511 hypothetical membrane protein P43chromosome CDS521656 1233 + 0.570965
ybdL S0520 putative aminotransferasechromosome CDS532840 1161 + 0.537468
ybdR S0532 putative oxidoreductasechromosome CDS543827 1239 + 0.504439
ybeJ S0648 putative periplasmic binding transport proteinchromosome CDS659005 909 + 0.487349
ybgH S0601 putative transport proteinchromosome CDS610617 1482 + 0.523617
ybgJ S0599 putative carboxylasechromosome CDS608924 657 - 0.572298
ybiB S0791 hypothetical proteinchromosome CDS774030 963 + 0.551402
ybiK S0821 putative asparaginasechromosome CDS806889 966 + 0.564182
ybjM S0844 hypothetical proteinchromosome CDS831662 378 + 0.489418
ybjP S0861 putative enzymechromosome CDS845503 516 - 0.540698
ybjU S0866 putative arylsulfatasechromosome CDS852346 1002 - 0.56487
ycaD S0898 putative MFS family transporter proteinchromosome CDS892021 1149 + 0.517842
ycdX S1101 hypothetical proteinchromosome CDS1077989 738 + 0.48103
ycdZ S1103 hypothetical proteinchromosome CDS1079376 522 + 0.542146
yceL S1149 hypothetical proteinchromosome CDS1114771 1209 - 0.55335
ycjJ S1383 putative amino acid/amine transport proteinchromosome CDS1351939 1386 - 0.535354
ycjQ S1402 putative oxidoreductasechromosome CDS1369742 1053 + 0.558405
yddG S1885 hypothetical proteinchromosome CDS1827858 882 + 0.497732
ydeD S1688 hypothetical proteinchromosome CDS1634343 801 + 0.498127
ydeF S1687 putative transport proteinchromosome CDS1632862 1119 - 0.495085
ydgR S1791 putative transport proteinchromosome CDS1729125 1503 + 0.511643
ydhC S1820 putative transport proteinchromosome CDS1759190 1212 + 0.535479
ydjE S1569 putative transport proteinchromosome CDS1527148 1359 + 0.452539
ydjS S1599 succinylglutamate desuccinylasechromosome CDS1556904 969 + 0.534572
yecC S2056 putative ATP-binding component of a transport systemchromosome CDS1969863 753 - 0.545817
yecS S2057 putative transport system permease protein (former yecC)chromosome CDS1970612 669 - 0.533632
yedA S2098 putative transmembrane subunitchromosome CDS2006086 921 + 0.536373
yedO S2058 D-cysteine desulfhydrasechromosome CDS1971295 1083 - 0.529086
yeeF S2196 putative amino acid/amine transport proteinchromosome CDS2074188 1359 - 0.529065
yegB S2267 putative transport proteinchromosome CDS2151108 1416 + 0.554379
yehW S2342 putative transport system permease proteinchromosome CDS2217963 732 - 0.565574
yehX S2343 putative ATP-binding component of a transport systemchromosome CDS2218699 927 - 0.558792
yehY S2344 putative transport system permease proteinchromosome CDS2219618 1158 - 0.570812
yeiO S2384 putative transportchromosome CDS2265743 1179 + 0.53011
yejA S2393 hypothetical proteinchromosome CDS2275020 1815 + 0.506336
yffG S2661 putative oxidoreductase, Fe-S subunitchromosome CDS2549682 1980 - 0.55505
yfhB S2779 hypothetical proteinchromosome CDS2676374 573 - 0.532286
yfhO S2749 cysteine desulfurasechromosome CDS2638939 1215 - 0.53251
yfiK S2813 hypothetical proteinchromosome CDS2705908 588 + 0.511905
ygcS S2980 putative transport proteinchromosome CDS2855260 1410 - 0.529078
ygeD S3043 putative resistance proteinschromosome CDS2927713 1191 - 0.558354
ygfD S3103 arginine/ornithine transport system ATPasechromosome CDS2989337 996 + 0.538153
ygiC S3283 putative synthetase/amidasechromosome CDS3162220 1161 + 0.504737
ygjG S3320 probable ornithine aminotransferasechromosome CDS3198693 1290 + 0.550388
ygjI S3325 putative oxidoreductasechromosome CDS3205334 1434 + 0.498605
ygjU S3336 putative transport proteinchromosome CDS3219032 1245 + 0.548594
ygjV S3337 hypothetical proteinchromosome CDS3220281 552 - 0.5
yhaO S3361 putative transport system permease proteinchromosome CDS3239303 1332 - 0.502252
yhaU S3379 putative transport proteinchromosome CDS3256185 1335 - 0.506367
yhbE S3442 hypothetical proteinchromosome CDS3315070 966 - 0.526915
yhdW S3521 putative periplasmic binding transport proteinchromosome CDS3391510 918 + 0.489107
yhdY S3526 putative transport system permease proteinchromosome CDS3394451 1104 + 0.51721
yhdZ S3527 putative ATP-binding component of a transport systemchromosome CDS3395562 759 + 0.467721
yhfC S4380 hypothetical proteinchromosome CDS4309736 1182 - 0.51269
yhfX S4363 hypothetical proteinchromosome CDS4292500 1164 + 0.541237
yhhK S4286 hypothetical proteinchromosome CDS4205128 384 - 0.559896
yhhS S4272 hypothetical proteinchromosome CDS4191706 1260 + 0.55873
yhjE S4212 putative transport proteinchromosome CDS4127224 1323 - 0.560091
yhjV S4196 putative transporter proteinchromosome CDS4102153 1272 - 0.449686
yhjX S4188 putative resistance proteinchromosome CDS4092147 1209 + 0.515302
yidG S3982 hypothetical proteinchromosome CDS3877471 363 - 0.506887
yidR S3996 hypothetical proteinchromosome CDS3889875 1275 - 0.536471
yidY S4019 putative transport proteinchromosome CDS3914226 1176 + 0.529762
yieO S3930 putative transport proteinchromosome CDS3823225 1404 + 0.49359
yifK S3890 putative amino acid/amine transport proteinchromosome CDS3782457 1386 - 0.532468
yigJ S3854 hypothetical proteinchromosome CDS3751792 369 - 0.509485
yigK S3853 hypothetical proteinchromosome CDS3751314 417 + 0.503597
yigM S3850 hypothetical proteinchromosome CDS3748194 900 - 0.548889
yihN S3802 putative resistance proteinchromosome CDS3697339 1059 - 0.448536
yjcB S3587 hypothetical proteinchromosome CDS3457386 351 - 0.535613
yjdE S3622 putative amino acid/amine transport proteinchromosome CDS3499308 1338 - 0.543348
yjeH S4562 putative transport proteinchromosome CDS4464969 1257 - 0.514718
yjeK S4569 hypothetical proteinchromosome CDS4471209 1029 - 0.532556
yjfC S4608 putative synthetase/amidasechromosome CDS4508689 1164 + 0.532646
yjiZ S4657 putative transport proteinchromosome CDS4551811 1362 - 0.517621
ylbB S0458 N-carbamoyl-L-amino acid amidohydrolasechromosome CDS466942 1158 - 0.515544
yneH S1696 glutaminasechromosome CDS1640697 927 + 0.517799
yphC S2764 putative oxidoreductasechromosome CDS2653160 1095 - 0.541552
ytfF S4541 putative transmembrane subunitchromosome CDS4447116 966 + 0.554865
yzgL S4315 chromosome pseudo4237435 294 + 0.44898