Gene list
Applied filters:
COG category: Unclassified
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953
Number of genes found: 69
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pseudotuberculosis IP 32953, IP 32953 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pYV0033 | hypothetical protein | pYV | CDS | 25800 | 114 | + | 0.561404 |
NA | pYV0087 | yscK; putative type III secretion protein | pYV | CDS | 60457 | 651 | + | 0.482335 |
NA | pYptb0043 | hypothetical protein | pYptb32953 | CDS | 27458 | 123 | + | 0.276423 |
NA | pYptb0027 | hypothetical protein | pYptb32953 | CDS | 17550 | 123 | + | 0.520325 |
NA | pYV0012 | hypothetical protein | pYV | CDS | 8771 | 210 | - | 0.447619 |
NA | pYptb0040 | hypothetical protein | pYptb32953 | CDS | 26953 | 147 | + | 0.469388 |
NA | pYV0006 | hypothetical protein | pYV | CDS | 5803 | 153 | + | 0.490196 |
NA | pYV0069 | yscP; putative type III secretion protein | pYV | CDS | 47223 | 1368 | + | 0.487573 |
NA | pYptb0021 | hypothetical protein | pYptb32953 | CDS | 16529 | 273 | + | 0.377289 |
NA | pYV0083 | yscG; putative type III secretion protein | pYV | CDS | 58548 | 348 | + | 0.442529 |
NA | pYV0050 | hypothetical protein | pYV | CDS | 35445 | 123 | + | 0.463415 |
NA | pYV0084 | yscH, yopR, lcrP; putative type III secretion protein | pYV | CDS | 58892 | 498 | + | 0.427711 |
NA | pYptb0019 | hypothetical protein | pYptb32953 | CDS | 15826 | 267 | + | 0.318352 |
NA | pYV0098 | yopP, yopJ; putative targeted effector protein | pYV | CDS | 67275 | 867 | - | 0.346021 |
NA | pYptb0042 | hypothetical protein | pYptb32953 | CDS | 27236 | 147 | + | 0.272109 |
NA | pYptb0026 | hypothetical protein | pYptb32953 | CDS | 17463 | 60 | + | 0.483333 |
NA | pYV0066 | hypothetical protein | pYV | CDS | 45305 | 105 | + | 0.390476 |
NA | pYV0075 | virG; putative Yop targeting lipoprotein | pYV | CDS | 52850 | 396 | + | 0.444444 |
NA | pYptb0041 | hypothetical protein | pYptb32953 | CDS | 27120 | 102 | + | 0.362745 |
NA | pYV0052 | hypothetical protein | pYV | CDS | 35951 | 123 | + | 0.479675 |
NA | pYV0094 | yopH; putative protein-tyrosine phosphatase Yop effector | pYV | CDS | 64366 | 1407 | - | 0.474058 |
NA | pYV0045 | hypothetical protein | pYV | CDS | 32524 | 192 | - | 0.458333 |
NA | pYV0043 | possible transposase remnant | pYV | CDS | 31368 | 192 | + | 0.458333 |
NA | pYV0044 | hypothetical protein | pYV | CDS | 31576 | 420 | + | 0.388095 |
NA | pYptb0034 | hypothetical protein | pYptb32953 | CDS | 23751 | 249 | + | 0.401606 |
NA | pYV0077 | hypothetical protein | pYV | CDS | 54263 | 99 | + | 0.323232 |
NA | pYptb0025 | hypothetical protein | pYptb32953 | CDS | 17341 | 123 | + | 0.479675 |
NA | pYV0020 | sycH; putative yopH targeting protein | pYV | CDS | 16714 | 426 | - | 0.41784 |
NA | pYptb0038 | hypothetical protein | pYptb32953 | CDS | 26274 | 216 | + | 0.398148 |
NA | pYV0096 | transposase, IS630 family | pYV | CDS | 66691 | 129 | - | 0.434109 |
NA | pYptb0002 | hypothetical protein | pYptb32953 | CDS | 1316 | 309 | + | 0.339806 |
NA | pYV0065 | yopN, lcrE; putative membrane-bound Yop targeting protein | pYV | CDS | 44364 | 882 | - | 0.460317 |
NA | pYV0064 | tyeA; putative Yop secretion and targeting protein | pYV | CDS | 44105 | 279 | - | 0.433692 |
NA | pYV0024 | sycE, yerA; putative yopE chaperone | pYV | CDS | 19897 | 393 | - | 0.409669 |
NA | pYptb0036 | hypothetical protein | pYptb32953 | CDS | 25339 | 237 | + | 0.42616 |
NA | pYV0099 | hypothetical protein | pYV | CDS | 68142 | 135 | - | 0.392593 |
NA | pYptb0017 | hypothetical protein | pYptb32953 | CDS | 14071 | 306 | + | 0.506536 |
NA | pYV0004 | hypothetical protein | pYV | CDS | 3411 | 240 | - | 0.504167 |
NA | pYV0097 | hypothetical protein | pYV | CDS | 66902 | 93 | - | 0.387097 |
NA | pYV0029 | hypothetical protein | pYV | CDS | 22359 | 174 | + | 0.471264 |
NA | pYV0025 | putative outer membrane virulence protein | pYV | CDS | 20483 | 660 | + | 0.510606 |
NA | pYV0030 | hypothetical protein | pYV | CDS | 22682 | 294 | - | 0.5 |
NA | pYptb0003 | hypothetical protein | pYptb32953 | CDS | 1910 | 228 | + | 0.29386 |
NA | pYV0041 | yop targeted effector yopT | pYV | CDS | 29513 | 969 | + | 0.430341 |
NA | pYV0048 | hypothetical protein | pYV | CDS | 35009 | 96 | - | 0.40625 |
NA | pYV0049 | hypothetical protein | pYV | CDS | 35209 | 216 | - | 0.430556 |
NA | pYptb0032 | hypothetical protein | pYptb32953 | CDS | 23291 | 153 | + | 0.496732 |
NA | pYV0081 | yscE; putative type III secretion protein | pYV | CDS | 58082 | 201 | + | 0.422886 |
NA | pYV0042 | yopT chaperone | pYV | CDS | 30481 | 393 | + | 0.414758 |
NA | pYV0053 | hypothetical protein | pYV | CDS | 36160 | 168 | + | 0.428571 |
NA | pYV0002 | hypothetical protein | pYV | CDS | 2218 | 450 | - | 0.453333 |
NA | pYV0005 | repA, repA1; putative replication initiation protein | pYV | CDS | 4823 | 879 | - | 0.5438 |
NA | pYV0063 | sycN; putative type III secretion protein | pYV | CDS | 43747 | 372 | - | 0.524194 |
NA | pYptb0023 | hypothetical protein | pYptb32953 | CDS | 17081 | 132 | + | 0.477273 |
NA | pYV0082 | yscF; putative type III secretion protein | pYV | CDS | 58283 | 264 | + | 0.416667 |
NA | pYV0068 | yscO; putative type III secretion protein | pYV | CDS | 46759 | 465 | + | 0.455914 |
NA | pYptb0016 | hypothetical protein | pYptb32953 | CDS | 13272 | 423 | + | 0.503546 |
NA | pYptb0022 | hypothetical protein | pYptb32953 | CDS | 16823 | 174 | + | 0.545977 |
NA | pYptb0039 | hypothetical protein | pYptb32953 | CDS | 26513 | 294 | + | 0.479592 |
NA | pYptb0024 | hypothetical protein | pYptb32953 | CDS | 17219 | 126 | + | 0.547619 |
NA | pYV0062 | yscX; putative type III secretion protein | pYV | CDS | 43382 | 369 | - | 0.495935 |
NA | pYV0059 | lcrR; hypothetical protein lcrR | pYV | CDS | 40503 | 441 | - | 0.489796 |
NA | pYptb0010 | hypothetical protein | pYptb32953 | CDS | 7718 | 246 | + | 0.443089 |
NA | pYV0040 | yop targeting protein yopK, yopQ | pYV | CDS | 28491 | 549 | - | 0.333333 |
NA | pYptb0033 | hypothetical protein | pYptb32953 | CDS | 23475 | 162 | + | 0.382716 |
triB | pYptb0005 | TriB Protein | pYptb32953 | CDS | 3194 | 294 | + | 0.452381 |
triD | pYptb0007 | TriD protein | pYptb32953 | CDS | 6318 | 714 | + | 0.47619 |
triK | pYptb0029 | TriK protein | pYptb32953 | CDS | 18485 | 1782 | + | 0.407969 |
triL | pYptb0030 | TriL protein | pYptb32953 | CDS | 20274 | 741 | + | 0.388664 |