TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-18 07:19:45

Gene list

Applied filters:

Genomic element: pCD

Number of genes found: 94

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_CD0072 targeted effector proteinpCD CDS65018 867 + 0.344867
NA YPA_CD0011 type III secretion proteinpCD CDS6927 1260 - 0.46746
NA YPA_CD0026 type III secretion proteinpCD CDS21262 369 + 0.495935
NA YPA_CD0054 transposasepCD CDS45551 1173 + 0.546462
NA YPA_CD0088 hypothetical proteinpCD CDS61967 450 + 0.451111
NA YPA_CD0085 hypothetical proteinpCD CDS43057 300 + 0.38
NA YPA_CD0017 pCD sig_peptide14764 87 - 0.505747
NA YPA_CD0021 type III secretion proteinpCD CDS17789 465 - 0.458065
NA YPA_CD0037 targeted effector proteinpCD CDS30367 1053 + 0.391263
NA YPA_CD0012 type III secretion proteinpCD CDS8183 1824 - 0.454496
NA YPA_CD0065 hypothetical proteinpCD CDS56829 318 + 0.493711
NA YPA_CD0034 hypothetical proteinpCD CDS28929 132 - 0.462121
NA YPA_CD0017 type III secretion proteinpCD CDS14584 267 - 0.453184
NA YPA_CD0003 type III secretion regulatory proteinpCD CDS2722 348 - 0.479885
NA YPA_CD0020 type III secretion proteinpCD CDS16422 1368 - 0.486842
NA YPA_CD0055 transposasepCD CDS46723 357 + 0.591036
NA YPA_CD0038 protein 25pCD CDS31462 300 - 0.436667
NA YPA_CD0006 pCD sig_peptide5203 66 - 0.30303
NA YPA_CD0039 hypothetical proteinpCD CDS31936 192 + 0.458333
NA YPA_CD0069 replication initiation proteinpCD CDS58943 867 + 0.542099
NA YPA_CD0075 protein-tyrosine phosphatase Yop effectorpCD CDS67567 1407 + 0.474058
NA YPA_CD0056 yopH targeting proteinpCD CDS47496 426 + 0.41784
NA YPA_CD0062 hypothetical proteinpCD CDS54615 921 + 0.421281
NA YPA_CD0053 hypothetical proteinpCD CDS44804 615 - 0.547967
NA YPA_CD0084 hypothetical proteinpCD CDS42105 174 - 0.471264
NA YPA_CD0030 V antigen, antihost protein/regulatorpCD CDS24840 981 + 0.377166
NA YPA_CD0078 transposasepCD CDS69790 381 - 0.435696
NA YPA_CD0050 hypothetical proteinpCD CDS42822 243 + 0.440329
NA YPA_CD0066 hypothetical proteinpCD CDS57170 408 + 0.539216
NA YPA_CD0079 Yop regulatorpCD CDS24551 288 + 0.46875
NA YPA_CD0058 transposasepCD CDS48902 267 - 0.479401
NA YPA_CD0008 type III secretion proteinpCD CDS5623 498 - 0.429719
NA YPA_CD0087 transposase remnantpCD CDS57839 96 + 0.479167
NA YPA_CD0063 hypothetical proteinpCD CDS55861 189 - 0.492063
NA YPA_CD0014 thermoregulatory proteinpCD CDS10828 816 - 0.416667
NA YPA_CD0002 ATP-binding proteinpCD CDS1110 780 + 0.503846
NA YPA_CD0043 hypothetical proteinpCD CDS36337 240 + 0.491667
NA YPA_CD0027 type III secretion proteinpCD CDS21627 345 + 0.46087
NA YPA_CD0049 plasmid partitioning control proteinpCD CDS40595 966 + 0.417184
NA YPA_CD0080 transposase ORFApCD CDS1899 276 - 0.460145
NA YPA_CD0007 type III secretion proteinpCD CDS5275 348 - 0.468391
NA YPA_CD0023 membrane-bound Yop targeting proteinpCD CDS19767 882 + 0.461451
NA YPA_CD0048 plasmid partitioning transcription repressorpCD CDS39390 1209 + 0.434243
NA YPA_CD0061 transposasepCD CDS50934 2316 + 0.51943
NA YPA_CD0051 outer membrane virulence proteinpCD CDS43496 660 - 0.510606
NA YPA_CD0009 type III secretion proteinpCD CDS6117 348 - 0.439655
NA YPA_CD0074 hypothetical proteinpCD CDS67078 207 + 0.608696
NA YPA_CD0032 Yop targeting proteinpCD CDS26317 1206 + 0.466833
NA YPA_CD0082 hypothetical proteinpCD CDS29444 123 - 0.463415
NA YPA_CD0083 hypothetical proteinpCD CDS38770 114 - 0.561404
NA YPA_CD0010 type III secretion proteinpCD CDS6466 264 - 0.416667
NA YPA_CD0016 type III secretion proteinpCD CDS13802 786 - 0.428753
NA YPA_CD0089 hypothetical proteinpCD CDS66165 93 + 0.387097
NA YPA_CD0008 pCD sig_peptide6061 60 - 0.45
NA YPA_CD0076 hypothetical proteinpCD CDS69194 180 - 0.466667
NA YPA_CD0059 resolvasepCD CDS50219 552 - 0.46558
NA YPA_CD0046 hypothetical proteinpCD CDS37868 459 + 0.551198
NA YPA_CD0052 yopE chaperonepCD CDS44349 393 + 0.409669
NA YPA_CD0067 Phospholipase D/TransphosphatidylasepCD CDS57994 249 + 0.493976
NA YPA_CD0025 type III secretion proteinpCD CDS20894 372 + 0.526882
NA YPA_CD0070 transposase remnantpCD CDS61393 279 + 0.508961
NA YPA_CD0018 Yop secretion membrane proteinpCD CDS14852 654 - 0.43578
NA YPA_CD0044 conjugative transfer surface exclusion proteinpCD CDS36803 618 + 0.487055
NA YPA_CD0071 targeted effector protein kinasepCD CDS62424 2199 + 0.481583
NA YPA_CD0041 yopT chaperonepCD CDS33779 399 - 0.411028
NA YPA_CD0036 hypothetical proteinpCD CDS29587 210 + 0.428571
NA YPA_CD0057 transposasepCD CDS48069 756 - 0.497355
NA YPA_CD0033 Yop negative regulation/targeting componentpCD CDS27541 921 + 0.431053
NA YPA_CD0086 hypothetical proteinpCD CDS55658 207 + 0.449275
NA YPA_CD0040 hypothetical proteinpCD CDS33092 123 - 0.406504
NA YPA_CD0042 cytotoxic effector proteinpCD CDS34177 969 - 0.431373
NA YPA_CD0031 yopB/yopD chaperonepCD CDS25833 507 + 0.441815
NA YPA_CD0047 transposase remnantpCD CDS38438 195 + 0.497436
NA YPA_CD0051 pCD sig_peptide44084 72 - 0.430556
NA YPA_CD0022 Yop secretion ATP synthasepCD CDS18250 1320 - 0.508333
NA YPA_CD0035 transposasepCD CDS29095 324 - 0.388889
NA YPA_CD0004 type III secretion proteinpCD CDS3294 633 - 0.450237
NA YPA_CD0028 membrane-bound Yop proteinpCD CDS21958 2115 + 0.463357
NA YPA_CD0060 hypothetical proteinpCD CDS53246 381 - 0.509186
NA YPA_CD0029 low calcium response locus protein RpCD CDS24069 441 + 0.489796
NA YPA_CD0077 transposasepCD CDS69485 309 - 0.459547
NA YPA_CD0006 type III secretion lipoproteinpCD CDS4534 735 - 0.428571
NA YPA_CD0013 hypothetical proteinpCD CDS10012 414 - 0.417874
NA YPA_CD0073 hypothetical proteinpCD CDS66470 648 - 0.503086
NA YPA_CD0081 type III secretion proteinpCD CDS6730 201 - 0.422886
NA YPA_CD0012 pCD sig_peptide9926 81 - 0.45679
NA YPA_CD0064 hypothetical proteinpCD CDS56199 459 + 0.555556
NA YPA_CD0001 transposasepCD CDS88 1023 + 0.527859
NA YPA_CD0015 type III secretion proteinpCD CDS12738 1065 - 0.431925
NA YPA_CD0005 type III secretion proteinpCD CDS3905 630 - 0.485714
NA YPA_CD0024 Yop secretion and targeting proteinpCD CDS20629 279 + 0.433692
NA YPA_CD0068 replication transcriptional regulatorpCD CDS58380 255 + 0.423529
NA YPA_CD0045 hypothetical proteinpCD CDS37527 318 + 0.487421
NA YPA_CD0019 type III secretion proteinpCD CDS15502 924 - 0.481602