Gene list
Applied filters:
Genomic element: pSD1_197
Number of genes found: 302
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella dysenteriae Sd197, Sd197 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pSD1_197 | repeat_region | 122402 | 1373 | + | 0.579752 | ||
NA | SDY_P033 | putative transposase, fragment | pSD1_197 | CDS | 28703 | 486 | + | 0.450617 |
NA | pSD1_197 | repeat_region | 113728 | 782 | - | 0.496164 | ||
NA | pSD1_197 | repeat_region | 38221 | 768 | - | 0.52474 | ||
NA | pSD1_197 | repeat_region | 69146 | 362 | - | 0.522099 | ||
NA | pSD1_197 | repeat_region | 108801 | 1353 | - | 0.563193 | ||
NA | SDY_P069 | ISSfl1 ORF1 | pSD1_197 | CDS | 59419 | 225 | - | 0.511111 |
NA | pSD1_197 | repeat_region | 59009 | 922 | + | 0.508677 | ||
NA | SDY_P057 | iso-IS1 ORF2 | pSD1_197 | CDS | 51512 | 396 | - | 0.517677 |
NA | SDY_P079 | IS600 ORF1 | pSD1_197 | CDS | 67139 | 303 | - | 0.468647 |
NA | SDY_P196 | IS3 ORF2 | pSD1_197 | CDS | 159179 | 429 | - | 0.568765 |
NA | SDY_P028 | iso-IS1 ORF1 | pSD1_197 | CDS | 23305 | 273 | + | 0.520147 |
NA | SDY_P133 | iso-IS1 ORF2 | pSD1_197 | CDS | 104960 | 396 | - | 0.520202 |
NA | SDY_P030 | IS100 ORF2 | pSD1_197 | CDS | 24880 | 642 | + | 0.5 |
NA | SDY_P065 | iso-IS1 ORF1 | pSD1_197 | CDS | 56996 | 273 | + | 0.505495 |
NA | SDY_P209 | hypothetical protein | pSD1_197 | CDS | 167342 | 252 | + | 0.559524 |
NA | pSD1_197 | repeat_region | 104946 | 766 | - | 0.506527 | ||
NA | SDY_P063 | hypothetical protein | pSD1_197 | CDS | 53802 | 252 | - | 0.555556 |
NA | pSD1_197 | repeat_region | 37283 | 938 | - | 0.493603 | ||
NA | pSD1_197 | repeat_region | 160460 | 225 | - | 0.471111 | ||
NA | SDY_P060 | putative transposase | pSD1_197 | CDS | 52645 | 579 | + | 0.499136 |
NA | pSD1_197 | repeat_region | 61882 | 923 | + | 0.510293 | ||
NA | pSD1_197 | repeat_region | 21735 | 1261 | + | 0.54322 | ||
NA | SDY_P146 | IS100 ORF2 | pSD1_197 | CDS | 113794 | 663 | - | 0.496229 |
NA | SDY_P217 | IS629 ORF2 | pSD1_197 | CDS | 175253 | 624 | + | 0.532051 |
NA | SDY_P052 | hypothetical protein | pSD1_197 | CDS | 45781 | 321 | + | 0.563863 |
NA | SDY_P054 | hypothetical protein | pSD1_197 | CDS | 46613 | 174 | - | 0.45977 |
NA | pSD1_197 | repeat_region | 82340 | 329 | + | 0.589666 | ||
NA | pSD1_197 | repeat_region | 163006 | 1306 | + | 0.540582 | ||
NA | SDY_P153 | IS600 ORF2 | pSD1_197 | CDS | 119550 | 714 | + | 0.519608 |
NA | SDY_P222 | IS3 ORF2 | pSD1_197 | CDS | 179875 | 153 | + | 0.490196 |
NA | SDY_P084 | IS100 ORF2 | pSD1_197 | CDS | 69951 | 234 | + | 0.482906 |
NA | SDY_P216 | IS2 ORF1 | pSD1_197 | CDS | 174754 | 366 | - | 0.530055 |
NA | SDY_P080 | hypothetical protein | pSD1_197 | CDS | 67698 | 156 | - | 0.5 |
NA | pSD1_197 | repeat_region | 53667 | 1310 | + | 0.535115 | ||
NA | SDY_P147 | IS1294 transposase | pSD1_197 | CDS | 114511 | 1293 | - | 0.571539 |
NA | SDY_P014 | putative transposase | pSD1_197 | CDS | 11826 | 378 | - | 0.529101 |
NA | SDY_P005 | iso-IS1 ORF2 | pSD1_197 | CDS | 4663 | 396 | + | 0.515152 |
NA | SDY_P156 | putative transposase | pSD1_197 | CDS | 121228 | 1116 | + | 0.578853 |
NA | SDY_P012 | IS2 ORF1 | pSD1_197 | CDS | 10361 | 366 | - | 0.530055 |
NA | SDY_P091 | putative IS orf, fragment | pSD1_197 | CDS | 73010 | 762 | + | 0.555118 |
NA | pSD1_197 | repeat_region | 85796 | 103 | - | 0.436893 | ||
NA | pSD1_197 | repeat_region | 169375 | 766 | - | 0.507833 | ||
NA | SDY_P208 | IS629 ORF2 | pSD1_197 | CDS | 166789 | 324 | - | 0.589506 |
NA | SDY_P066 | iso-IS1 ORF2 | pSD1_197 | CDS | 57295 | 396 | + | 0.517677 |
NA | pSD1_197 | repeat_region | 36896 | 113 | - | 0.39823 | ||
NA | SDY_P016 | IS3 orf2, fragment | pSD1_197 | CDS | 13547 | 120 | - | 0.441667 |
NA | pSD1_197 | repeat_region | 123860 | 1041 | - | 0.526417 | ||
NA | pSD1_197 | repeat_region | 13717 | 264 | - | 0.450758 | ||
NA | pSD1_197 | repeat_region | 14576 | 333 | - | 0.513514 | ||
NA | pSD1_197 | repeat_region | 67922 | 265 | - | 0.467925 | ||
NA | SDY_P215 | IS2 ORF2 | pSD1_197 | CDS | 173891 | 840 | - | 0.544048 |
NA | pSD1_197 | repeat_region | 175916 | 141 | - | 0.531915 | ||
NA | pSD1_197 | repeat_region | 4303 | 770 | + | 0.503896 | ||
NA | pSD1_197 | repeat_region | 16762 | 303 | + | 0.577558 | ||
NA | pSD1_197 | repeat_region | 6056 | 743 | - | 0.495289 | ||
NA | SDY_P039 | IS600 ORF2 | pSD1_197 | CDS | 37326 | 375 | - | 0.488 |
NA | SDY_P076 | hypothetical protein | pSD1_197 | CDS | 65116 | 396 | + | 0.525253 |
NA | SDY_P210 | IS629 ORF2 | pSD1_197 | CDS | 166995 | 357 | - | 0.54902 |
NA | pSD1_197 | repeat_region | 67505 | 188 | - | 0.446809 | ||
NA | SDY_P198 | hypothetical protein | pSD1_197 | CDS | 160815 | 777 | - | 0.312741 |
NA | pSD1_197 | repeat_region | 173880 | 1331 | - | 0.530428 | ||
NA | pSD1_197 | repeat_region | 9488 | 1330 | - | 0.530827 | ||
NA | SDY_P040 | IS600 ORF2 | pSD1_197 | CDS | 37678 | 456 | - | 0.515351 |
NA | SDY_P154 | IS1353 transposase | pSD1_197 | CDS | 120388 | 243 | + | 0.502058 |
NA | SDY_P081 | IS2 orf1, fragment | pSD1_197 | CDS | 68076 | 219 | - | 0.420091 |
NA | pSD1_197 | repeat_region | 51498 | 766 | - | 0.507833 | ||
NA | SDY_P157 | hypothetical protein | pSD1_197 | CDS | 121613 | 489 | + | 0.578732 |
NA | SDY_P139 | IS1294 transposase | pSD1_197 | CDS | 108972 | 1209 | - | 0.575682 |
NA | SDY_P089 | hypothetical protein | pSD1_197 | CDS | 71809 | 174 | + | 0.390805 |
NA | SDY_P150 | hypothetical protein | pSD1_197 | CDS | 116800 | 174 | - | 0.45977 |
NA | pSD1_197 | repeat_region | 44070 | 766 | - | 0.507833 | ||
NA | pSD1_197 | repeat_region | 67040 | 466 | - | 0.463519 | ||
NA | SDY_P218 | hypothetical protein | pSD1_197 | CDS | 176003 | 231 | + | 0.454545 |
NA | pSD1_197 | repeat_region | 3079 | 130 | + | 0.476923 | ||
NA | pSD1_197 | repeat_region | 182392 | 154 | - | 0.487013 | ||
NA | SDY_P134 | iso-IS1 ORF1 | pSD1_197 | CDS | 105382 | 273 | - | 0.501832 |
NA | SDY_P044 | hypothetical protein | pSD1_197 | CDS | 40229 | 168 | + | 0.482143 |
NA | SDY_P205 | putative IS91 ORF2 | pSD1_197 | CDS | 165211 | 258 | - | 0.457364 |
NA | pSD1_197 | repeat_region | 246 | 193 | - | 0.549223 | ||
NA | pSD1_197 | repeat_region | 112014 | 588 | - | 0.486395 | ||
NA | SDY_P148 | hypothetical protein | pSD1_197 | CDS | 115784 | 273 | - | 0.501832 |
NA | SDY_P203 | IS629 ORF2 | pSD1_197 | CDS | 163622 | 648 | + | 0.549383 |
NA | SDY_P068 | ISSfl1 ORF2 | pSD1_197 | CDS | 59024 | 390 | - | 0.512821 |
NA | SDY_P050 | iso-IS1 ORF1 | pSD1_197 | CDS | 44506 | 273 | - | 0.509158 |
NA | pSD1_197 | repeat_region | 16442 | 237 | - | 0.544304 | ||
NA | SDY_P043 | ISSfl1 ORF2 | pSD1_197 | CDS | 39701 | 390 | + | 0.512821 |
NA | SDY_P127 | hypothetical protein | pSD1_197 | CDS | 103259 | 303 | + | 0.432343 |
NA | SDY_P036 | hypothetical protein | pSD1_197 | CDS | 32204 | 321 | + | 0.563863 |
NA | SDY_P202 | hypothetical protein | pSD1_197 | CDS | 163141 | 321 | - | 0.563863 |
NA | SDY_P204 | IS91 ORF | pSD1_197 | CDS | 164747 | 402 | - | 0.529851 |
NA | pSD1_197 | repeat_region | 19890 | 129 | + | 0.426357 | ||
NA | SDY_P061 | hypothetical protein | pSD1_197 | CDS | 53208 | 291 | + | 0.560137 |
NA | SDY_P145 | hypothetical protein | pSD1_197 | CDS | 113078 | 291 | - | 0.453608 |
NA | pSD1_197 | repeat_region | 179873 | 185 | + | 0.491892 | ||
NA | pSD1_197 | repeat_region | 25608 | 348 | + | 0.522988 | ||
NA | SDY_P116 | IS600 ORF1 | pSD1_197 | CDS | 93224 | 303 | - | 0.465347 |
NA | SDY_P059 | putative transposase, fragment | pSD1_197 | CDS | 52421 | 129 | + | 0.48062 |
NA | pSD1_197 | repeat_region | 42895 | 138 | - | 0.492754 | ||
NA | SDY_P093 | putative IS orf, fragment | pSD1_197 | CDS | 73771 | 381 | + | 0.580052 |
NA | SDY_P114 | IS186 ORF1 | pSD1_197 | CDS | 91637 | 693 | + | 0.484848 |
NA | SDY_P048 | IS600 ORF1 | pSD1_197 | CDS | 43633 | 303 | + | 0.465347 |
NA | SDY_P072 | ISSfl1 ORF1 | pSD1_197 | CDS | 62292 | 450 | - | 0.531111 |
NA | SDY_P104 | putative IS orf | pSD1_197 | CDS | 82151 | 243 | - | 0.55144 |
NA | SDY_P022 | putative transposase, fragment | pSD1_197 | CDS | 18083 | 207 | + | 0.449275 |
NA | SDY_P195 | IS600 ORF2 | pSD1_197 | CDS | 158350 | 621 | - | 0.523349 |
NA | pSD1_197 | repeat_region | 23667 | 1942 | + | 0.516993 | ||
NA | SDY_P142 | IS600 ORF2 | pSD1_197 | CDS | 112011 | 189 | - | 0.529101 |
NA | SDY_P213 | iso-IS1 ORF1 | pSD1_197 | CDS | 169811 | 273 | - | 0.509158 |
NA | pSD1_197 | repeat_region | 111297 | 717 | + | 0.545328 | ||
NA | SDY_P095 | iso-IS1 ORF1 | pSD1_197 | CDS | 74948 | 273 | - | 0.509158 |
NA | SDY_P002 | IS2 ORF2 | pSD1_197 | CDS | 191 | 177 | - | 0.519774 |
NA | pSD1_197 | repeat_region | 66273 | 768 | - | 0.527344 | ||
NA | SDY_P149 | ISSfl4 ORF1 | pSD1_197 | CDS | 116076 | 588 | - | 0.493197 |
NA | SDY_P221 | hypothetical protein | pSD1_197 | CDS | 179127 | 711 | - | 0.340366 |
NA | pSD1_197 | repeat_region | 74513 | 765 | - | 0.508497 | ||
NA | SDY_P090 | plasmid stable inheritance protein | pSD1_197 | CDS | 72117 | 366 | - | 0.415301 |
NA | pSD1_197 | repeat_region | 43461 | 108 | - | 0.453704 | ||
NA | SDY_P053 | putative transposase | pSD1_197 | CDS | 46208 | 330 | - | 0.530303 |
NA | SDY_P129 | putative iso-IS1 orf | pSD1_197 | CDS | 104009 | 213 | - | 0.511737 |
NA | SDY_P122 | oriT nicking and unwinding protein, fragment | pSD1_197 | CDS | 96517 | 4194 | + | 0.599189 |
NA | pSD1_197 | repeat_region | 159216 | 647 | - | 0.547141 | ||
NA | SDY_P197 | IS3 ORF1 | pSD1_197 | CDS | 159579 | 219 | - | 0.502283 |
NA | SDY_P105 | IS3 ORF2 | pSD1_197 | CDS | 82491 | 219 | + | 0.579909 |
NA | SDY_P011 | IS2 ORF2 | pSD1_197 | CDS | 9498 | 840 | - | 0.542857 |
NA | SDY_P159 | IS100 ORF1 | pSD1_197 | CDS | 123820 | 927 | - | 0.529666 |
NA | pSD1_197 | repeat_region | 114660 | 1117 | - | 0.581916 | ||
NA | SDY_P141 | hypothetical protein | pSD1_197 | CDS | 110161 | 273 | - | 0.501832 |
NA | pSD1_197 | repeat_region | 91569 | 758 | + | 0.497361 | ||
NA | SDY_P062 | IS629 ORF2 | pSD1_197 | CDS | 54044 | 891 | + | 0.538721 |
NA | SDY_P027 | IS3 ORF2 | pSD1_197 | CDS | 22096 | 870 | + | 0.554023 |
NA | SDY_P138 | hypothetical protein | pSD1_197 | CDS | 108605 | 96 | + | 0.5625 |
NA | pSD1_197 | repeat_region | 39183 | 922 | - | 0.511931 | ||
NA | SDY_P152 | IS600 ORF1 | pSD1_197 | CDS | 119107 | 303 | + | 0.468647 |
NA | pSD1_197 | repeat_region | 43569 | 501 | + | 0.477046 | ||
NA | SDY_P123 | putative DNA helicase I, fragment | pSD1_197 | CDS | 100659 | 693 | + | 0.616162 |
NA | SDY_P058 | iso-IS1 ORF1 | pSD1_197 | CDS | 51934 | 273 | - | 0.509158 |
NA | SDY_P201 | putative transposase | pSD1_197 | CDS | 162546 | 378 | - | 0.529101 |
NA | SDY_P118 | hypothetical protein | pSD1_197 | CDS | 94961 | 414 | + | 0.55314 |
NA | SDY_P021 | putative IS orf, fragment | pSD1_197 | CDS | 16115 | 1200 | + | 0.555 |
NA | pSD1_197 | repeat_region | 37022 | 225 | - | 0.524444 | ||
NA | pSD1_197 | repeat_region | 165034 | 523 | - | 0.487572 | ||
NA | SDY_P098 | iso-IS1 ORF2 | pSD1_197 | CDS | 76543 | 396 | + | 0.512626 |
NA | SDY_P009 | IS600 ORF1 | pSD1_197 | CDS | 6432 | 303 | - | 0.465347 |
NA | pSD1_197 | repeat_region | 69937 | 211 | + | 0.488152 | ||
NA | SDY_P158 | ISSfl2 ORF | pSD1_197 | CDS | 122432 | 1197 | - | 0.578947 |
NA | pSD1_197 | repeat_region | 5589 | 132 | + | 0.545455 | ||
NA | SDY_P103 | IS4 ORF | pSD1_197 | CDS | 80794 | 1347 | + | 0.537491 |
NA | pSD1_197 | repeat_region | 23253 | 416 | + | 0.509615 | ||
NA | SDY_P026 | IS3 ORF1 | pSD1_197 | CDS | 21800 | 300 | + | 0.523333 |
NA | SDY_P019 | putative IS orf, fragment | pSD1_197 | CDS | 15233 | 408 | + | 0.529412 |
NA | SDY_P132 | hypothetical protein | pSD1_197 | CDS | 104850 | 114 | + | 0.368421 |
NA | pSD1_197 | repeat_region | 17238 | 198 | + | 0.469697 | ||
NA | SDY_P106 | hypothetical protein | pSD1_197 | CDS | 82697 | 2850 | - | 0.510175 |
NA | SDY_P212 | iso-IS1 ORF2 | pSD1_197 | CDS | 169389 | 396 | - | 0.517677 |
NA | pSD1_197 | repeat_region | 119043 | 1264 | + | 0.499209 | ||
NA | SDY_P085 | hypothetical protein | pSD1_197 | CDS | 70236 | 291 | - | 0.419244 |
NA | SDY_P111 | putative transposase | pSD1_197 | CDS | 90163 | 669 | + | 0.538117 |
NA | SDY_P077 | IS600 ORF2 | pSD1_197 | CDS | 65508 | 714 | - | 0.518207 |
NA | pSD1_197 | repeat_region | 103481 | 767 | - | 0.526727 | ||
NA | SDY_P206 | putative reverse transcriptase, fragment | pSD1_197 | CDS | 166459 | 201 | - | 0.567164 |
NA | SDY_P130 | hypothetical protein | pSD1_197 | CDS | 104290 | 231 | + | 0.489177 |
NA | SDY_P086 | hypothetical protein | pSD1_197 | CDS | 70533 | 213 | - | 0.441315 |
NA | SDY_P088 | hypothetical protein | pSD1_197 | CDS | 71481 | 276 | + | 0.492754 |
NA | SDY_P207 | IS3 ORF2 | pSD1_197 | CDS | 166574 | 243 | - | 0.559671 |
NA | pSD1_197 | repeat_region | 15685 | 308 | - | 0.574675 | ||
NA | SDY_P102 | putative IS orf | pSD1_197 | CDS | 80513 | 243 | + | 0.54321 |
NA | pSD1_197 | repeat_region | 76187 | 766 | + | 0.503916 | ||
NA | SDY_P051 | IS629 ORF2 | pSD1_197 | CDS | 44973 | 648 | - | 0.546296 |
NA | SDY_P092 | putative plasmid stable inheritance protein | pSD1_197 | CDS | 72514 | 498 | - | 0.355422 |
NA | pSD1_197 | repeat_region | 121221 | 335 | + | 0.58806 | ||
NA | pSD1_197 | repeat_region | 31354 | 1306 | - | 0.539816 | ||
NA | SDY_P200 | putative transposase | pSD1_197 | CDS | 162252 | 201 | - | 0.567164 |
NA | SDY_P073 | hypothetical protein | pSD1_197 | CDS | 62787 | 375 | - | 0.416 |
NA | pSD1_197 | repeat_region | 116137 | 609 | + | 0.489327 | ||
NA | pSD1_197 | repeat_region | 80728 | 1426 | + | 0.533661 | ||
NA | pSD1_197 | repeat_region | 158380 | 843 | - | 0.512456 | ||
NA | SDY_P199 | putative transposase | pSD1_197 | CDS | 162115 | 201 | - | 0.467662 |
NA | SDY_P223 | hypothetical protein | pSD1_197 | CDS | 180309 | 138 | - | 0.369565 |
NA | SDY_P035 | IS629 ORF2 | pSD1_197 | CDS | 31384 | 624 | - | 0.540064 |
NA | SDY_P047 | IS1 ORF, fragment | pSD1_197 | CDS | 42851 | 285 | - | 0.452632 |
NA | pSD1_197 | repeat_region | 13364 | 225 | - | 0.395556 | ||
NA | SDY_P113 | hypothetical protein | pSD1_197 | CDS | 91342 | 204 | - | 0.588235 |
NA | SDY_P087 | hypothetical protein | pSD1_197 | CDS | 71197 | 285 | + | 0.550877 |
NA | SDY_P007 | ISEc8 orf, fragment | pSD1_197 | CDS | 5493 | 402 | - | 0.559702 |
NA | SDY_P143 | IS600 ORF1 | pSD1_197 | CDS | 112235 | 303 | - | 0.465347 |
NA | SDY_P121 | oriT nicking and unwinding protein, fragment | pSD1_197 | CDS | 96090 | 420 | + | 0.561905 |
NA | SDY_P094 | iso-IS1 ORF2 | pSD1_197 | CDS | 74527 | 216 | - | 0.49537 |
NA | pSD1_197 | repeat_region | 44931 | 1306 | - | 0.539051 | ||
NA | SDY_P020 | ISSfl4 ORF2 | pSD1_197 | CDS | 15640 | 348 | + | 0.563218 |
NA | SDY_P144 | hypothetical protein | pSD1_197 | CDS | 112605 | 483 | - | 0.461698 |
NA | SDY_P024 | hypothetical protein | pSD1_197 | CDS | 20036 | 225 | - | 0.515556 |
NA | pSD1_197 | repeat_region | 92327 | 1264 | - | 0.488133 | ||
NA | SDY_P015 | hypothetical protein | pSD1_197 | CDS | 12740 | 579 | - | 0.319516 |
NA | SDY_P034 | putative reverse transcriptase | pSD1_197 | CDS | 29477 | 1128 | - | 0.481383 |
NA | SDY_P017 | hypothetical protein | pSD1_197 | CDS | 14675 | 288 | + | 0.493056 |
NA | SDY_P008 | IS600 ORF2 | pSD1_197 | CDS | 5974 | 423 | - | 0.534279 |
NA | pSD1_197 | repeat_region | 13980 | 600 | - | 0.501667 | ||
NA | pSD1_197 | repeat_region | 56939 | 766 | + | 0.506527 | ||
NA | SDY_P049 | iso-IS1 ORF2 | pSD1_197 | CDS | 44084 | 396 | - | 0.517677 |
NA | SDY_P071 | ISSfl1 ORF2 | pSD1_197 | CDS | 61897 | 390 | - | 0.510256 |
NA | SDY_P018 | IS91 ORF | pSD1_197 | CDS | 14289 | 402 | - | 0.529851 |
NA | pSD1_197 | repeat_region | 65465 | 808 | - | 0.506188 | ||
NA | SDY_P155 | IS1353 transposase | pSD1_197 | CDS | 120685 | 354 | + | 0.497175 |
NA | pSD1_197 | repeat_region | 164438 | 600 | - | 0.501667 | ||
NA | pSD1_197 | repeat_region | 58896 | 115 | - | 0.504348 | ||
NA | pSD1_197 | repeat_region | 25960 | 136 | + | 0.558824 | ||
NA | SDY_P083 | iso-IS1 ORF1 | pSD1_197 | CDS | 69343 | 273 | - | 0.498168 |
NA | SDY_P001 | putative resolvase, fragment | pSD1_197 | CDS | 359 | 465 | + | 0.509677 |
NA | pSD1_197 | repeat_region | 175297 | 622 | + | 0.540193 | ||
NA | SDY_P115 | IS600 ORF2 | pSD1_197 | CDS | 92370 | 714 | - | 0.518207 |
NA | SDY_P112 | hypothetical protein | pSD1_197 | CDS | 90973 | 309 | - | 0.543689 |
NA | SDY_P082 | hypothetical protein | pSD1_197 | CDS | 68349 | 639 | - | 0.370892 |
NA | pSD1_197 | repeat_region | 166621 | 369 | - | 0.574526 | ||
NA | SDY_P042 | ISSfl1 ORF1 | pSD1_197 | CDS | 39246 | 450 | + | 0.531111 |
NA | pSD1_197 | repeat_region | 18371 | 159 | + | 0.45283 | ||
NA | pSD1_197 | repeat_region | 166988 | 741 | - | 0.54386 | ||
NA | SDY_P029 | IS100 ORF1 | pSD1_197 | CDS | 23820 | 1089 | + | 0.535354 |
acp | SDY_P162 | Acp | pSD1_197 | CDS | 129030 | 237 | - | 0.299578 |
ccdA | SDY_P096 | post-segregation antitoxin | pSD1_197 | CDS | 75460 | 219 | + | 0.497717 |
ccdB | SDY_P097 | post-segregation toxin | pSD1_197 | CDS | 75680 | 306 | + | 0.506536 |
finO | SDY_P125 | FinO | pSD1_197 | CDS | 102172 | 561 | + | 0.565062 |
hmo | SDY_P131 | putative regulator | pSD1_197 | CDS | 104623 | 189 | + | 0.37037 |
icsA | SDY_P214 | IcsA | pSD1_197 | CDS | 170357 | 3309 | + | 0.409187 |
icsB | SDY_P170 | IcsB | pSD1_197 | CDS | 136657 | 1485 | - | 0.337374 |
icsP | SDY_P224 | IcsP | pSD1_197 | CDS | 181375 | 981 | + | 0.375127 |
insB | SDY_P078 | IS1 ORF2 | pSD1_197 | CDS | 66288 | 378 | - | 0.542328 |
insB | SDY_P041 | IS1 ORF2 | pSD1_197 | CDS | 38236 | 378 | - | 0.537037 |
insB | SDY_P128 | IS1 ORF2 | pSD1_197 | CDS | 103496 | 246 | - | 0.512195 |
ipaA | SDY_P163 | IpaA | pSD1_197 | CDS | 129270 | 1902 | - | 0.355941 |
ipaB | SDY_P166 | IpaB | pSD1_197 | CDS | 133340 | 1743 | - | 0.378084 |
ipaC | SDY_P165 | IpaC | pSD1_197 | CDS | 132229 | 1092 | - | 0.384615 |
ipaD | SDY_P164 | IpaD | pSD1_197 | CDS | 131180 | 999 | - | 0.353353 |
ipaH | SDY_P140 | invasion plasmid antigen, fragment | pSD1_197 | CDS | 110427 | 1545 | + | 0.541748 |
ipaH1.4 | SDY_P045 | invasion plasmid antigen | pSD1_197 | CDS | 40414 | 1749 | - | 0.457404 |
ipaH4.5 | SDY_P037 | invasion plasmid antigen | pSD1_197 | CDS | 32657 | 1725 | - | 0.473623 |
ipaH7.8 | SDY_P038 | invasion plasmid antigen | pSD1_197 | CDS | 34809 | 1698 | - | 0.46172 |
ipaH9.8 | SDY_P099 | invasion plasmid antigen | pSD1_197 | CDS | 77122 | 1668 | + | 0.482014 |
ipaJ | SDY_P160 | IpaJ | pSD1_197 | CDS | 126261 | 684 | + | 0.372807 |
ipgA | SDY_P169 | IpgA | pSD1_197 | CDS | 136255 | 390 | - | 0.302564 |
ipgB1 | SDY_P168 | IpgB1 | pSD1_197 | CDS | 135613 | 627 | - | 0.339713 |
ipgB2 | SDY_P025 | IpgB2 | pSD1_197 | CDS | 20653 | 576 | + | 0.328125 |
ipgC | SDY_P167 | IpgC | pSD1_197 | CDS | 135088 | 468 | - | 0.356838 |
ipgD | SDY_P171 | IpgD | pSD1_197 | CDS | 138455 | 1617 | + | 0.355597 |
ipgE | SDY_P172 | IpgE | pSD1_197 | CDS | 140081 | 363 | + | 0.347107 |
ipgF | SDY_P173 | IpgF | pSD1_197 | CDS | 140443 | 459 | + | 0.361656 |
mkaD | SDY_P013 | mouse killing factor | pSD1_197 | CDS | 10901 | 720 | - | 0.377778 |
msbB2 | SDY_P110 | MsbB2 | pSD1_197 | CDS | 89045 | 945 | + | 0.431746 |
mvpT | SDY_P120 | plasmid maintenance protein | pSD1_197 | CDS | 95781 | 228 | - | 0.535088 |
mxiA | SDY_P185 | MxiA | pSD1_197 | CDS | 148836 | 2067 | + | 0.347363 |
mxiC | SDY_P184 | MxiC | pSD1_197 | CDS | 147822 | 1008 | + | 0.338294 |
mxiD | SDY_P183 | MxiD | pSD1_197 | CDS | 146043 | 1701 | + | 0.336273 |
mxiE | SDY_P182 | MxiE | pSD1_197 | CDS | 145424 | 633 | + | 0.328594 |
mxiG | SDY_P174 | MxiG | pSD1_197 | CDS | 140910 | 1116 | + | 0.30914 |
mxiH | SDY_P175 | MxiH | pSD1_197 | CDS | 142033 | 252 | + | 0.349206 |
mxiI | SDY_P176 | MxiI | pSD1_197 | CDS | 142297 | 294 | + | 0.333333 |
mxiJ | SDY_P177 | MxiJ | pSD1_197 | CDS | 142596 | 726 | + | 0.34573 |
mxiK | SDY_P178 | MxiK | pSD1_197 | CDS | 143327 | 519 | + | 0.339114 |
mxiL | SDY_P180 | MxiL | pSD1_197 | CDS | 144475 | 408 | + | 0.306373 |
mxiM | SDY_P181 | MxiM | pSD1_197 | CDS | 144866 | 429 | + | 0.305361 |
mxiN | SDY_P179 | MxiN | pSD1_197 | CDS | 143787 | 696 | + | 0.320402 |
ospB | SDY_P003 | OspB | pSD1_197 | CDS | 1233 | 684 | + | 0.342105 |
ospC1 | SDY_P055 | OspC1 | pSD1_197 | CDS | 47797 | 1413 | + | 0.314933 |
ospC2 | SDY_P070 | OspC2 | pSD1_197 | CDS | 60293 | 1455 | + | 0.325773 |
ospC3 | SDY_P151 | OspC3 | pSD1_197 | CDS | 117314 | 1455 | + | 0.31134 |
ospC4 | SDY_P006 | pSD1_197 | pseudo | 3363 | 1785 | - | 0.387675 | |
ospD1 | SDY_P023 | OspD1 | pSD1_197 | CDS | 18877 | 678 | + | 0.359882 |
ospD2 | SDY_P010 | OspD2 | pSD1_197 | CDS | 7424 | 1719 | - | 0.33217 |
ospD3 | SDY_P056 | OspD3 | pSD1_197 | CDS | 49566 | 1650 | + | 0.364242 |
ospE2 | SDY_P046 | OspE2 | pSD1_197 | CDS | 42529 | 267 | - | 0.344569 |
ospG | SDY_P101 | OspG | pSD1_197 | CDS | 79518 | 591 | + | 0.357022 |
parA | SDY_P031 | plasmid segregation protein | pSD1_197 | CDS | 26268 | 1200 | + | 0.4425 |
parB | SDY_P032 | plasmid segregation protein | pSD1_197 | CDS | 27467 | 981 | + | 0.424057 |
phoN1 | SDY_P067 | PhoN1 | pSD1_197 | CDS | 58105 | 750 | + | 0.42 |
phoN2/apy | SDY_P004 | PhoN2/Apy | pSD1_197 | CDS | 2244 | 741 | + | 0.423752 |
repA | SDY_P137 | RepA | pSD1_197 | CDS | 107005 | 858 | + | 0.586247 |
repA | SDY_P220 | RepA | pSD1_197 | CDS | 176840 | 858 | + | 0.587413 |
repB | SDY_P136 | RepB | pSD1_197 | CDS | 106454 | 261 | + | 0.417625 |
repB | SDY_P219 | RepB | pSD1_197 | CDS | 176278 | 261 | + | 0.402299 |
rfbU | SDY_P108 | UDP-sugar hydrolase | pSD1_197 | CDS | 87084 | 942 | + | 0.434183 |
shf | SDY_P107 | putative carbohydrate transport protein | pSD1_197 | CDS | 86143 | 792 | + | 0.401515 |
spa-orf10 | SDY_P194 | hypothetical protein | pSD1_197 | CDS | 157540 | 234 | + | 0.320513 |
spa13 | SDY_P188 | Spa13 | pSD1_197 | CDS | 152756 | 288 | + | 0.326389 |
spa15 | SDY_P186 | Spa15 | pSD1_197 | CDS | 150915 | 402 | + | 0.330846 |
spa24 | SDY_P191 | Spa24 | pSD1_197 | CDS | 154788 | 651 | + | 0.345622 |
spa29 | SDY_P192 | Spa29 | pSD1_197 | CDS | 155713 | 771 | + | 0.328145 |
spa32 | SDY_P189 | Spa32 | pSD1_197 | CDS | 153030 | 879 | + | 0.311718 |
spa33 | SDY_P190 | Spa33 | pSD1_197 | CDS | 153902 | 882 | + | 0.320862 |
spa40 | SDY_P193 | Spa40 | pSD1_197 | CDS | 156490 | 1029 | + | 0.318756 |
spa47 | SDY_P187 | Spa47 | pSD1_197 | CDS | 151320 | 1293 | + | 0.392885 |
stbA | SDY_P075 | plasmid stable inheritance protein | pSD1_197 | CDS | 63742 | 960 | - | 0.396875 |
stbB | SDY_P074 | plasmid stable inheritance protein | pSD1_197 | CDS | 63347 | 396 | - | 0.388889 |
traD | SDY_P117 | hypothetical protein | pSD1_197 | CDS | 93565 | 1515 | + | 0.535314 |
traX | SDY_P124 | F pilin acetylation protein | pSD1_197 | CDS | 101371 | 747 | + | 0.575636 |
trbH | SDY_P119 | TrbH | pSD1_197 | CDS | 95374 | 720 | + | 0.5 |
ushA | SDY_P064 | UshA | pSD1_197 | CDS | 55224 | 1704 | + | 0.407864 |
virA | SDY_P211 | VirA | pSD1_197 | CDS | 167852 | 1203 | - | 0.352452 |
virB | SDY_P161 | VirB | pSD1_197 | CDS | 127894 | 930 | - | 0.34086 |
virK | SDY_P109 | VirK | pSD1_197 | CDS | 88030 | 951 | + | 0.416404 |
yacA | SDY_P100 | hypothetical protein | pSD1_197 | CDS | 78997 | 270 | + | 0.507407 |
yigA | SDY_P126 | hypothetical protein | pSD1_197 | CDS | 102863 | 213 | + | 0.615023 |
yihA | SDY_P135 | hypothetical protein | pSD1_197 | CDS | 105714 | 501 | + | 0.52495 |