

Gene list
Applied filters:
Genomic element: chromosome
Number of genes found: 4581
| Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
| Escherichia coli K12, K-12 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | chromosome | repeat_region | 2099773 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 566000 | 1258 | + | 0.535771 | ||
| NA | chromosome | repeat_region | 2286941 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 3650059 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 15388 | 1343 | + | 0.513775 | ||
| NA | b0159 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase | chromosome | CDS | 178455 | 699 | - | 0.523605 |
| NA | chromosome | repeat_region | 1394068 | 1195 | - | 0.532218 | ||
| NA | chromosome | repeat_region | 2512296 | 1343 | + | 0.513775 | ||
| NA | chromosome | repeat_region | 2994383 | 1331 | + | 0.530428 | ||
| NA | chromosome | misc_feature | 1195443 | 15204 | + | 0.452973 | ||
| NA | chromosome | repeat_region | 4505482 | 1221 | - | 0.454545 | ||
| NA | b3022 | predicted cyanide hydratase | chromosome | CDS | 3166270 | 297 | - | 0.400673 |
| NA | chromosome | rep_origin | 3923767 | 232 | + | 0.409483 | ||
| NA | chromosome | repeat_region | 687074 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 1648867 | 706 | - | 0.543909 | ||
| NA | chromosome | misc_feature | 2064183 | 12873 | + | 0.517284 | ||
| NA | chromosome | misc_feature | 1409949 | 23060 | + | 0.465525 | ||
| NA | chromosome | repeat_region | 1976527 | 768 | - | 0.532552 | ||
| NA | chromosome | misc_feature | 2556721 | 6790 | + | 0.483358 | ||
| NA | chromosome | misc_feature | 2753971 | 22031 | + | 0.461305 | ||
| NA | chromosome | repeat_region | 3128168 | 1195 | - | 0.532218 | ||
| NA | chromosome | misc_feature | 564025 | 21302 | + | 0.432682 | ||
| NA | chromosome | repeat_region | 270930 | 822 | + | 0.540146 | ||
| NA | chromosome | repeat_region | 573814 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 269765 | 1221 | + | 0.454545 | ||
| NA | chromosome | repeat_region | 2066965 | 1331 | + | 0.530428 | ||
| NA | chromosome | repeat_region | 278387 | 768 | - | 0.535156 | ||
| NA | chromosome | repeat_region | 269430 | 565 | + | 0.446018 | ||
| NA | chromosome | repeat_region | 273179 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 2168195 | 1258 | + | 0.535771 | ||
| NA | chromosome | repeat_region | 380484 | 1331 | - | 0.530428 | ||
| NA | chromosome | repeat_region | 3363578 | 1195 | + | 0.532218 | ||
| NA | chromosome | repeat_region | 4506703 | 327 | - | 0.458716 | ||
| NA | chromosome | repeat_region | 4496204 | 1331 | - | 0.530428 | ||
| NA | chromosome | repeat_region | 3184118 | 1331 | - | 0.530428 | ||
| NA | chromosome | misc_feature | 2464407 | 10215 | + | 0.440627 | ||
| NA | chromosome | repeat_region | 279155 | 181 | + | 0.403315 | ||
| NA | chromosome | repeat_region | 289858 | 768 | - | 0.535156 | ||
| NA | chromosome | repeat_region | 1425623 | 1196 | + | 0.537625 | ||
| NA | chromosome | misc_feature | 4494563 | 40070 | + | 0.501622 | ||
| NA | chromosome | repeat_region | 3718656 | 1443 | + | 0.440748 | ||
| NA | chromosome | repeat_region | 3581451 | 768 | + | 0.532552 | ||
| NA | chromosome | misc_feature | 1588774 | 28 | - | 0.285714 | ||
| NA | chromosome | repeat_region | 4500113 | 1426 | - | 0.535063 | ||
| NA | chromosome | repeat_region | 4505138 | 338 | + | 0.446746 | ||
| NA | chromosome | repeat_region | 1093468 | 1258 | - | 0.535771 | ||
| NA | chromosome | repeat_region | 1465934 | 1331 | + | 0.530428 | ||
| NA | chromosome | repeat_region | 1467320 | 1221 | + | 0.454545 | ||
| NA | chromosome | repeat_region | 390933 | 1258 | - | 0.535771 | ||
| NA | chromosome | repeat_region | 314453 | 1255 | + | 0.536255 | ||
| NA | chromosome | misc_feature | 262182 | 34308 | + | 0.534482 | ||
| NA | chromosome | repeat_region | 4516495 | 768 | + | 0.516927 | ||
| NA | chromosome | repeat_region | 19796 | 768 | - | 0.532552 | ||
| NA | chromosome | misc_feature | 1630310 | 20469 | + | 0.444184 | ||
| NA | chromosome | repeat_region | 4507030 | 795 | + | 0.540881 | ||
| NA | chromosome | repeat_region | 1049001 | 768 | + | 0.53125 | ||
| NA | chromosome | repeat_region | 607231 | 1343 | + | 0.513775 | ||
| NA | chromosome | repeat_region | 2064183 | 1195 | + | 0.531381 | ||
| aaeA | b3241 | p-hydroxybenzoic acid efflux system component | chromosome | CDS | 3386216 | 933 | - | 0.535906 |
| aaeB | b3240 | p-hydroxybenzoic acid efflux system component | chromosome | CDS | 3384243 | 1968 | - | 0.525915 |
| aaeR | b3243 | predicted DNA-binding transcriptional regulator, efflux system | chromosome | CDS | 3387542 | 930 | + | 0.529032 |
| aaeX | b3242 | membrane protein of efflux system | chromosome | CDS | 3387156 | 204 | - | 0.47549 |
| aas | b2836 | 2-acyl-glycerophospho-ethanolamine acyltransferase | chromosome | CDS | 2971877 | 2160 | - | 0.526389 |
| aat | b0885 | leucyl/phenylalanyl-tRNA--protein transferase | chromosome | CDS | 925951 | 705 | - | 0.540426 |
| abgA | b1338 | predicted peptidase, aminobenzoyl-glutamate utilization protein | chromosome | CDS | 1401279 | 1311 | - | 0.55225 |
| abgB | b1337 | predicted peptidase, aminobenzoyl-glutamate utilization protein | chromosome | CDS | 1399834 | 1446 | - | 0.525588 |
| abgR | b1339 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1402765 | 909 | + | 0.49615 |
| abgT | b1336 | predicted cryptic aminobenzoyl-glutamate transporter | chromosome | CDS | 1398271 | 1527 | - | 0.492469 |
| abrB | b0715 | predicted regulator | chromosome | CDS | 745946 | 1047 | - | 0.561605 |
| accA | b0185 | acetyl-CoA carboxylase subunit alpha | chromosome | CDS | 208621 | 960 | + | 0.522917 |
| accB | b3255 | acetyl-CoA carboxylase | chromosome | CDS | 3403458 | 471 | + | 0.518047 |
| accC | b3256 | acetyl-CoA carboxylase | chromosome | CDS | 3403939 | 1350 | + | 0.534074 |
| accD | b2316 | acetyl-CoA carboxylase subunit beta | chromosome | CDS | 2431034 | 915 | - | 0.554098 |
| aceA | b4015 | isocitrate lyase | chromosome | CDS | 4215132 | 1305 | + | 0.553257 |
| aceB | b4014 | malate synthase | chromosome | CDS | 4213501 | 1602 | + | 0.517478 |
| aceE | b0114 | pyruvate dehydrogenase subunit E1 | chromosome | CDS | 123017 | 2664 | + | 0.530405 |
| aceF | b0115 | dihydrolipoamide acetyltransferase | chromosome | CDS | 125695 | 1893 | + | 0.546751 |
| aceK | b4016 | bifunctional isocitrate dehydrogenase kinase/phosphatase protein | chromosome | CDS | 4216619 | 1737 | + | 0.527922 |
| ackA | b2296 | acetate kinase | chromosome | CDS | 2411492 | 1203 | + | 0.522028 |
| acnA | b1276 | aconitate hydratase | chromosome | CDS | 1333855 | 2676 | + | 0.529148 |
| acnB | b0118 | aconitate hydratase | chromosome | CDS | 131615 | 2598 | + | 0.558891 |
| acpP | b1094 | acyl carrier protein | chromosome | CDS | 1150838 | 237 | + | 0.481013 |
| acpS | b2563 | 4'-phosphopantetheinyl transferase | chromosome | CDS | 2698640 | 381 | - | 0.514436 |
| acpT | b3475 | holo-(acyl carrier protein) synthase 2 | chromosome | CDS | 3610992 | 588 | + | 0.564626 |
| acrA | b0463 | multidrug efflux system | chromosome | CDS | 483650 | 1194 | - | 0.538526 |
| acrB | b0462 | multidrug efflux system protein | chromosome | CDS | 480478 | 3150 | - | 0.539683 |
| acrD | b2470 | aminoglycoside/multidrug efflux system | chromosome | CDS | 2585617 | 3114 | + | 0.544637 |
| acrE | b3265 | cytoplasmic membrane lipoprotein | chromosome | CDS | 3411886 | 1158 | + | 0.520725 |
| acrF | b3266 | multidrug efflux system protein | chromosome | CDS | 3413055 | 3105 | + | 0.515298 |
| acrR | b0464 | DNA-binding transcriptional repressor | chromosome | CDS | 484985 | 648 | + | 0.453704 |
| acs | b4069 | acetyl-coenzyme A synthetase | chromosome | CDS | 4283436 | 1959 | - | 0.568657 |
| actP | b4067 | acetate permease | chromosome | CDS | 4281276 | 1650 | - | 0.557576 |
| ada | b2213 | fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | chromosome | CDS | 2307363 | 1065 | - | 0.569014 |
| add | b1623 | adenosine deaminase | chromosome | CDS | 1700257 | 1002 | + | 0.538922 |
| ade | b3665 | cryptic adenine deaminase | chromosome | CDS | 3841987 | 1767 | + | 0.546123 |
| adhE | b1241 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase | chromosome | CDS | 1294669 | 2676 | - | 0.506353 |
| adhP | b1478 | alcohol dehydrogenase | chromosome | CDS | 1550852 | 1011 | - | 0.524233 |
| adiA | b4117 | biodegradative arginine decarboxylase | chromosome | CDS | 4336277 | 2271 | - | 0.52664 |
| adiC | b4115 | arginine:agmatin | chromosome | CDS | 4333717 | 1338 | - | 0.537369 |
| adiY | b4116 | DNA-binding transcriptional activator | chromosome | CDS | 4335191 | 762 | - | 0.413386 |
| adk | b0474 | adenylate kinase | chromosome | CDS | 496399 | 645 | + | 0.517829 |
| aegA | b2468 | fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit | chromosome | CDS | 2581568 | 1980 | - | 0.557071 |
| aer | b3072 | fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component | chromosome | CDS | 3215578 | 1521 | - | 0.547666 |
| aes | b0476 | acetyl esterase | chromosome | CDS | 498238 | 960 | - | 0.520833 |
| afuB | b0263 | CP4-6 prophage; predicted ferric trasnporter subunit | chromosome | CDS | 278038 | 363 | - | 0.559229 |
| afuC | b0262 | CP4-6 prophage; predicted ferric transporter subunit | chromosome | CDS | 276980 | 1047 | - | 0.563515 |
| agaA | b3135 | predicted truncated N-acetylgalactosamine-6-phosphate deacetylase | chromosome | CDS | 3279144 | 504 | + | 0.569444 |
| agaB | b3138 | N-acetylgalactosamine-specific enzyme IIB component of PTS | chromosome | CDS | 3282192 | 477 | + | 0.440252 |
| agaC | b3139 | N-acetylgalactosamine-specific enzyme IIC component of PTS | chromosome | CDS | 3282707 | 804 | + | 0.513682 |
| agaD | b3140 | N-acetylgalactosamine-specific enzyme IID component of PTS | chromosome | CDS | 3283500 | 792 | + | 0.493687 |
| agaI | b3141 | galactosamine-6-phosphate isomerase | chromosome | CDS | 3284292 | 756 | + | 0.502645 |
| agaR | b3131 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3275878 | 810 | - | 0.522222 |
| agaS | b3136 | tagatose-6-phosphate ketose/aldose isomerase | chromosome | CDS | 3279998 | 1155 | + | 0.566234 |
| agaV | b3133 | N-acetylgalactosamine-specific enzyme IIB component of PTS | chromosome | CDS | 3278239 | 474 | + | 0.506329 |
| agaW | b3134 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) | chromosome | CDS | 3278723 | 402 | + | 0.58209 |
| agp | b1002 | glucose-1-phosphatase/inositol phosphatase | chromosome | CDS | 1064808 | 1242 | + | 0.516103 |
| ahpC | b0605 | alkyl hydroperoxide reductase, C22 subunit | chromosome | CDS | 638168 | 564 | + | 0.5 |
| ahpF | b0606 | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding | chromosome | CDS | 638976 | 1566 | + | 0.53129 |
| aidB | b4187 | isovaleryl CoA dehydrogenase | chromosome | CDS | 4412298 | 1626 | + | 0.54305 |
| ais | b2252 | hypothetical protein | chromosome | CDS | 2363040 | 603 | - | 0.432836 |
| alaS | b2697 | alanyl-tRNA synthetase | chromosome | CDS | 2817403 | 2631 | - | 0.536298 |
| alaT | b3853 | tRNA-Ala | chromosome | tRNA | 4035283 | 76 | + | 0.631579 |
| alaU | b3276 | tRNA-Ala | chromosome | tRNA | 3424980 | 76 | - | 0.631579 |
| alaV | b0203 | tRNA-Ala | chromosome | tRNA | 225500 | 76 | + | 0.631579 |
| alaW | b2397 | tRNA-Ala | chromosome | tRNA | 2516178 | 76 | - | 0.605263 |
| alaX | b2396 | tRNA-Ala | chromosome | tRNA | 2516063 | 76 | - | 0.605263 |
| aldA | b1415 | aldehyde dehydrogenase A, NAD-linked | chromosome | CDS | 1486256 | 1440 | + | 0.509722 |
| aldB | b3588 | aldehyde dehydrogenase B | chromosome | CDS | 3752996 | 1539 | - | 0.547758 |
| alkA | b2068 | 3-methyl-adenine DNA glycosylase II | chromosome | CDS | 2144716 | 849 | - | 0.555948 |
| alkB | b2212 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions | chromosome | CDS | 2306713 | 651 | - | 0.526882 |
| allA | b0505 | ureidoglycolate hydrolase | chromosome | CDS | 531675 | 483 | + | 0.511387 |
| allB | b0512 | allantoinase | chromosome | CDS | 538371 | 1362 | + | 0.516153 |
| allC | b0516 | N-carbamoyl-L-amino acid amidohydrolase | chromosome | CDS | 543281 | 1236 | - | 0.513754 |
| allD | b0517 | ureidoglycolate dehydrogenase | chromosome | CDS | 544538 | 1050 | - | 0.52381 |
| allR | b0506 | DNA-binding transcriptional repressor | chromosome | CDS | 532235 | 816 | + | 0.525735 |
| alpA | b2624 | CP4-57 prophage; DNA-binding transcriptional activator | chromosome | CDS | 2756666 | 213 | + | 0.469484 |
| alr | b4053 | alanine racemase | chromosome | CDS | 4263805 | 1080 | + | 0.559259 |
| alsA | b4087 | fused D-allose transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 4307471 | 1533 | - | 0.479452 |
| alsB | b4088 | D-allose transporter subunit | chromosome | CDS | 4309130 | 936 | - | 0.485043 |
| alsC | b4086 | D-allose transporter subunit | chromosome | CDS | 4306512 | 981 | - | 0.524975 |
| alsE | b4085 | allulose-6-phosphate 3-epimerase | chromosome | CDS | 4305806 | 696 | - | 0.491379 |
| alsK | b4084 | D-allose kinase | chromosome | CDS | 4304893 | 930 | - | 0.549462 |
| alx | b3088 | predicted inner membrane protein, part of terminus | chromosome | CDS | 3236602 | 966 | + | 0.540373 |
| amiA | b2435 | N-acetylmuramoyl-l-alanine amidase I | chromosome | CDS | 2550374 | 870 | + | 0.497701 |
| amiB | b4169 | N-acetylmuramoyl-l-alanine amidase II | chromosome | CDS | 4394088 | 1338 | + | 0.550822 |
| amiC | b2817 | N-acetylmuramoyl-L-alanine amidase | chromosome | CDS | 2945779 | 1254 | - | 0.535088 |
| amn | b1982 | AMP nucleosidase | chromosome | CDS | 2053085 | 1455 | + | 0.502406 |
| ampC | b4150 | beta-lactamase/D-alanine carboxypeptidase | chromosome | CDS | 4375834 | 1134 | - | 0.501764 |
| ampD | b0110 | N-acetyl-anhydromuranmyl-L-alanine amidase | chromosome | CDS | 118733 | 552 | + | 0.538043 |
| ampE | b0111 | predicted inner membrane protein | chromosome | CDS | 119281 | 855 | + | 0.520468 |
| ampG | b0433 | muropeptide transporter | chromosome | CDS | 451294 | 1476 | - | 0.536585 |
| ampH | b0376 | beta-lactamase/D-alanine carboxypeptidase | chromosome | CDS | 394354 | 1158 | - | 0.553541 |
| amtB | b0451 | ammonium transporter | chromosome | CDS | 472190 | 1287 | + | 0.561772 |
| amyA | b1927 | cytoplasmic alpha-amylase | chromosome | CDS | 2004180 | 1488 | + | 0.497984 |
| ansA | b1767 | cytoplasmic asparaginase I | chromosome | CDS | 1848884 | 1017 | + | 0.511308 |
| ansB | b2957 | periplasmic L-asparaginase II | chromosome | CDS | 3097704 | 1047 | - | 0.526266 |
| ansP | b1453 | L-asparagine transporter | chromosome | CDS | 1522505 | 1500 | - | 0.52 |
| apaG | b0050 | hypothetical protein | chromosome | CDS | 51229 | 378 | - | 0.518519 |
| apaH | b0049 | diadenosinetetraphosphatase | chromosome | CDS | 50380 | 843 | - | 0.557533 |
| aphA | b4055 | acid phosphatase/phosphotransferase, class B, non-specific | chromosome | CDS | 4267437 | 714 | + | 0.494398 |
| appA | b0980 | phosphoanhydride phosphorylase | chromosome | CDS | 1039840 | 1299 | + | 0.538876 |
| appB | b0979 | cytochrome bd-II oxidase, subunit II | chromosome | CDS | 1038519 | 1137 | + | 0.532102 |
| appC | b0978 | cytochrome bd-II oxidase, subunit I | chromosome | CDS | 1036963 | 1545 | + | 0.540453 |
| appY | b0564 | DLP12 prophage; DNA-binding transcriptional activator | chromosome | CDS | 582904 | 750 | + | 0.317333 |
| apt | b0469 | adenine phosphoribosyltransferase | chromosome | CDS | 490636 | 552 | + | 0.543478 |
| aqpZ | b0875 | aquaporin Z | chromosome | CDS | 914575 | 696 | - | 0.522988 |
| araA | b0062 | L-arabinose isomerase | chromosome | CDS | 66835 | 1503 | - | 0.55489 |
| araB | b0063 | ribulokinase | chromosome | CDS | 68348 | 1701 | - | 0.580247 |
| araC | b0064 | DNA-binding transcriptional dual regulator | chromosome | CDS | 70387 | 879 | + | 0.525597 |
| araD | b0061 | L-ribulose-5-phosphate 4-epimerase | chromosome | CDS | 65855 | 696 | - | 0.553161 |
| araE | b2841 | arabinose transporter | chromosome | CDS | 2978786 | 1419 | - | 0.511628 |
| araF | b1901 | L-arabinose transporter subunit | chromosome | CDS | 1983163 | 990 | - | 0.518182 |
| araG | b1900 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 1981579 | 1515 | - | 0.522772 |
| araH | b4460 | fused L-arabinose transporter subunits of ABC superfamily: membrane components | chromosome | CDS | 1980578 | 990 | - | 0.511111 |
| araJ | b0396 | predicted transporter | chromosome | CDS | 410521 | 1185 | - | 0.507173 |
| arcA | b4401 | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA | chromosome | CDS | 4637613 | 717 | - | 0.51046 |
| arcB | b3210 | hybrid sensory histidine kinase in two-component regulatory system with ArcA | chromosome | CDS | 3348711 | 2337 | - | 0.506205 |
| argA | b2818 | N-acetylglutamate synthase | chromosome | CDS | 2947264 | 1332 | + | 0.525526 |
| argB | b3959 | acetylglutamate kinase | chromosome | CDS | 4154039 | 774 | + | 0.555556 |
| argC | b3958 | N-acetyl-gamma-glutamyl-phosphate reductase | chromosome | CDS | 4153024 | 1005 | + | 0.535323 |
| argD | b3359 | bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase | chromosome | CDS | 3486982 | 1221 | - | 0.545455 |
| argE | b3957 | acetylornithine deacetylase | chromosome | CDS | 4151719 | 1152 | - | 0.517361 |
| argF | b0273 | CP4-6 prophage; ornithine carbamoyltransferase 2, chain F | chromosome | CDS | 288525 | 1005 | - | 0.58806 |
| argG | b3172 | argininosuccinate synthase | chromosome | CDS | 3316659 | 1344 | + | 0.526042 |
| argH | b3960 | argininosuccinate lyase | chromosome | CDS | 4154873 | 1374 | + | 0.564774 |
| argI | b4254 | ornithine carbamoyltransferase 1 | chromosome | CDS | 4475330 | 1005 | - | 0.521393 |
| argK | b2918 | arginine/ornithine transport system ATPase | chromosome | CDS | 3061009 | 996 | + | 0.539157 |
| argO | b2923 | arginine exporter protein | chromosome | CDS | 3066195 | 636 | - | 0.507862 |
| argP | b2916 | chromosome replication initiation inhibitor protein | chromosome | CDS | 3057775 | 894 | + | 0.543624 |
| argQ | b2691 | tRNA-Arg | chromosome | tRNA | 2815806 | 77 | - | 0.597403 |
| argR | b3237 | arginine repressor | chromosome | CDS | 3382725 | 471 | + | 0.4862 |
| argS | b1876 | arginyl-tRNA synthetase | chromosome | CDS | 1958086 | 1734 | + | 0.532872 |
| argT | b2310 | lysine/arginine/ornithine transporter subunit | chromosome | CDS | 2425031 | 783 | - | 0.501916 |
| argU | b0536 | tRNA-Arg | chromosome | tRNA | 563946 | 77 | + | 0.61039 |
| argV | b2694 | tRNA-Arg | chromosome | tRNA | 2816495 | 77 | - | 0.597403 |
| argW | b2348 | tRNA-Arg | chromosome | tRNA | 2464331 | 75 | + | 0.493333 |
| argX | b3796 | tRNA-Arg | chromosome | tRNA | 3980398 | 77 | + | 0.675325 |
| argY | b2693 | tRNA-Arg | chromosome | tRNA | 2816220 | 77 | - | 0.597403 |
| argZ | b2692 | tRNA-Arg | chromosome | tRNA | 2816081 | 77 | - | 0.597403 |
| arnT | b2257 | 4-amino-4-deoxy-L-arabinose transferase | chromosome | CDS | 2368930 | 1653 | + | 0.509982 |
| aroA | b0908 | 3-phosphoshikimate 1-carboxyvinyltransferase | chromosome | CDS | 958035 | 1284 | + | 0.507788 |
| aroB | b3389 | 3-dehydroquinate synthase | chromosome | CDS | 3515420 | 1089 | - | 0.541781 |
| aroC | b2329 | chorismate synthase | chromosome | CDS | 2444410 | 1086 | - | 0.567219 |
| aroD | b1693 | 3-dehydroquinate dehydratase | chromosome | CDS | 1772710 | 759 | + | 0.504611 |
| aroE | b3281 | dehydroshikimate reductase, NAD(P)-binding | chromosome | CDS | 3428042 | 819 | - | 0.489621 |
| aroF | b2601 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible | chromosome | CDS | 2738102 | 1071 | - | 0.518207 |
| aroG | b0754 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible | chromosome | CDS | 784856 | 1053 | + | 0.521368 |
| aroH | b1704 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible | chromosome | CDS | 1786459 | 1047 | + | 0.531041 |
| aroK | b3390 | shikimate kinase I | chromosome | CDS | 3516565 | 522 | - | 0.492337 |
| aroL | b0388 | shikimate kinase II | chromosome | CDS | 405629 | 525 | + | 0.521905 |
| aroM | b0390 | hypothetical protein | chromosome | CDS | 406652 | 678 | + | 0.464602 |
| aroP | b0112 | aromatic amino acid transporter | chromosome | CDS | 120178 | 1374 | - | 0.526929 |
| arpA | b4017 | regulator of acetyl CoA synthetase | chromosome | CDS | 4218324 | 2187 | - | 0.376315 |
| arpB | b4494 | chromosome | pseudo | 1801118 | 1900 | + | 0.390526 | |
| arpB | b4494 | chromosome | pseudo | 1801118 | 1900 | + | 0.390526 | |
| arpB_1 | b1720 | chromosome | pseudo | 1801118 | 474 | + | 0.360759 | |
| arpB_2 | b1721 | chromosome | pseudo | 1801602 | 1416 | + | 0.40113 | |
| arsB | b3502 | arsenite/antimonite transporter | chromosome | CDS | 3646958 | 1290 | + | 0.539535 |
| arsC | b3503 | arsenate reductase | chromosome | CDS | 3648260 | 426 | + | 0.518779 |
| arsR | b3501 | DNA-binding transcriptional repressor | chromosome | CDS | 3646551 | 354 | + | 0.508475 |
| artI | b0863 | arginine transporter subunit | chromosome | CDS | 901480 | 732 | - | 0.502732 |
| artJ | b0860 | arginine transporter subunit | chromosome | CDS | 899067 | 732 | - | 0.448087 |
| artM | b0861 | arginine transporter subunit | chromosome | CDS | 900089 | 669 | - | 0.521674 |
| artP | b0864 | arginine transporter subunit | chromosome | CDS | 902229 | 729 | - | 0.526749 |
| artQ | b0862 | arginine transporter subunit | chromosome | CDS | 900757 | 717 | - | 0.549512 |
| ascB | b2716 | cryptic 6-phospho-beta-glucosidase | chromosome | CDS | 2839012 | 1425 | + | 0.515088 |
| ascF | b2715 | fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component | chromosome | CDS | 2837546 | 1458 | + | 0.561043 |
| ascG | b2714 | DNA-binding transcriptional repressor | chromosome | CDS | 2836276 | 1014 | - | 0.531558 |
| asd | b3433 | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 3571798 | 1104 | - | 0.541667 |
| aslA | b3801 | acrylsulfatase-like enzyme | chromosome | CDS | 3982375 | 1656 | - | 0.532005 |
| aslB | b3800 | predicted regulator of arylsulfatase activity | chromosome | CDS | 3980981 | 1236 | + | 0.526699 |
| asmA | b2064 | predicted assembly protein | chromosome | CDS | 2137783 | 1854 | - | 0.525351 |
| asnA | b3744 | asparagine synthetase AsnA | chromosome | CDS | 3925178 | 993 | + | 0.564955 |
| asnB | b0674 | asparagine synthetase B | chromosome | CDS | 696736 | 1665 | - | 0.521321 |
| asnC | b3743 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3924568 | 459 | - | 0.494553 |
| asnS | b0930 | asparaginyl-tRNA synthetase | chromosome | CDS | 986808 | 1401 | - | 0.523911 |
| asnT | b1977 | tRNA-Asn | chromosome | tRNA | 2042573 | 76 | + | 0.526316 |
| asnU | b1986 | tRNA-Asn | chromosome | tRNA | 2057875 | 76 | + | 0.526316 |
| asnV | b1989 | tRNA-Asn | chromosome | tRNA | 2060284 | 76 | + | 0.526316 |
| asnW | b1984 | tRNA-Asn | chromosome | tRNA | 2056051 | 76 | - | 0.526316 |
| aspA | b4139 | aspartate ammonia-lyase | chromosome | CDS | 4364914 | 1437 | - | 0.491997 |
| aspC | b0928 | aspartate aminotransferase, PLP-dependent | chromosome | CDS | 983742 | 1191 | - | 0.52225 |
| aspS | b1866 | aspartyl-tRNA synthetase | chromosome | CDS | 1946774 | 1773 | - | 0.537507 |
| aspT | b3760 | tRNA-Asp | chromosome | tRNA | 3944895 | 77 | + | 0.636364 |
| aspU | b0206 | tRNA-Asp | chromosome | tRNA | 228928 | 77 | + | 0.636364 |
| aspV | b0216 | tRNA-Asp | chromosome | tRNA | 236931 | 77 | + | 0.636364 |
| asr | b1597 | acid shock protein precursor | chromosome | CDS | 1669400 | 309 | + | 0.511327 |
| astA | b1747 | arginine succinyltransferase | chromosome | CDS | 1827755 | 1035 | - | 0.560386 |
| astB | b1745 | succinylarginine dihydrolase | chromosome | CDS | 1824940 | 1344 | - | 0.555804 |
| astC | b1748 | succinylornithine transaminase, PLP-dependent | chromosome | CDS | 1828786 | 1221 | - | 0.550369 |
| astD | b1746 | succinylglutamic semialdehyde dehydrogenase | chromosome | CDS | 1826280 | 1479 | - | 0.580798 |
| astE | b1744 | succinylglutamate desuccinylase | chromosome | CDS | 1823979 | 969 | - | 0.53354 |
| atoA | b2222 | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit | chromosome | CDS | 2322131 | 651 | + | 0.536098 |
| atoB | b2224 | acetyl-CoA acetyltransferase | chromosome | CDS | 2324131 | 1185 | + | 0.529958 |
| atoC | b2220 | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | chromosome | CDS | 2319888 | 1386 | + | 0.489899 |
| atoD | b2221 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit | chromosome | CDS | 2321469 | 663 | + | 0.538462 |
| atoE | b2223 | short chain fatty acid transporter | chromosome | CDS | 2322778 | 1323 | + | 0.530612 |
| atoS | b2219 | sensory histidine kinase in two-component regulatory system with AtoC | chromosome | CDS | 2318065 | 1827 | + | 0.485495 |
| atpA | b3734 | F0F1 ATP synthase subunit alpha | chromosome | CDS | 3916339 | 1542 | - | 0.533722 |
| atpB | b3738 | F0F1 ATP synthase subunit A | chromosome | CDS | 3919259 | 816 | - | 0.502451 |
| atpC | b3731 | F0F1 ATP synthase subunit epsilon | chromosome | CDS | 3913576 | 420 | - | 0.552381 |
| atpD | b3732 | F0F1 ATP synthase subunit beta | chromosome | CDS | 3914016 | 1383 | - | 0.547361 |
| atpE | b3737 | F0F1 ATP synthase subunit C | chromosome | CDS | 3918973 | 240 | - | 0.541667 |
| atpF | b3736 | F0F1 ATP synthase subunit B | chromosome | CDS | 3918441 | 471 | - | 0.528662 |
| atpG | b3733 | F0F1 ATP synthase subunit gamma | chromosome | CDS | 3915425 | 864 | - | 0.534722 |
| atpH | b3735 | F0F1 ATP synthase subunit delta | chromosome | CDS | 3917893 | 534 | - | 0.518727 |
| atpI | b3739 | F0F1 ATP synthase subunit I | chromosome | CDS | 3920083 | 381 | - | 0.52231 |
| avtA | b3572 | valine--pyruvate transaminase | chromosome | CDS | 3737728 | 1254 | + | 0.521531 |
| azoR | b1412 | acyl carrier protein phosphodiesterase | chromosome | CDS | 1480279 | 606 | - | 0.519802 |
| bacA | b3057 | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 3201332 | 822 | - | 0.524331 |
| baeR | b2079 | DNA-binding response regulator in two-component regulatory system with BaeS | chromosome | CDS | 2162300 | 723 | + | 0.540802 |
| baeS | b2078 | sensory histidine kinase in two-component regulatory system with BaeR | chromosome | CDS | 2160900 | 1404 | + | 0.537037 |
| barA | b2786 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY | chromosome | CDS | 2913079 | 2757 | + | 0.498368 |
| basR | b4113 | DNA-binding response regulator in two-component regulatory system with BasS | chromosome | CDS | 4331305 | 669 | - | 0.532138 |
| basS | b4112 | sensory histidine kinase in two-component regulatory system with BasR | chromosome | CDS | 4330204 | 1092 | - | 0.542125 |
| bax | b3570 | hypothetical protein | chromosome | CDS | 3734376 | 825 | - | 0.482424 |
| bcp | b2480 | thioredoxin-dependent thiol peroxidase | chromosome | CDS | 2598500 | 471 | + | 0.494692 |
| bcr | b2182 | bicyclomycin/multidrug efflux system | chromosome | CDS | 2276592 | 1191 | - | 0.533165 |
| bcsA | b3533 | cellulose synthase, catalytic subunit | chromosome | CDS | 3690641 | 2619 | - | 0.553646 |
| bcsB | b3532 | regulator of cellulose synthase, cyclic di-GMP binding | chromosome | CDS | 3688291 | 2340 | - | 0.549145 |
| bcsC | b3530 | cellulose synthase subunit | chromosome | CDS | 3683723 | 3474 | - | 0.5711 |
| bcsE | b3536 | hypothetical protein | chromosome | CDS | 3694481 | 1572 | + | 0.48855 |
| bcsF | b3537 | hypothetical protein | chromosome | CDS | 3696049 | 192 | + | 0.484375 |
| bcsG | b3538 | predicted inner membrane protein | chromosome | CDS | 3696237 | 1680 | + | 0.526786 |
| bcsZ | b3531 | endo-1,4-D-glucanase | chromosome | CDS | 3687178 | 1107 | - | 0.547425 |
| bdm | b1481 | biofilm-dependent modulation protein | chromosome | CDS | 1554089 | 216 | - | 0.453704 |
| betA | b0311 | choline dehydrogenase | chromosome | CDS | 324801 | 1671 | - | 0.570916 |
| betB | b0312 | betaine aldehyde dehydrogenase, NAD-dependent | chromosome | CDS | 326485 | 1473 | - | 0.582485 |
| betI | b0313 | transcriptional regulator BetI | chromosome | CDS | 327971 | 588 | - | 0.568027 |
| betT | b0314 | choline transporter of high affinity | chromosome | CDS | 328687 | 2034 | + | 0.553097 |
| bfd | b3337 | bacterioferritin-associated ferredoxin | chromosome | CDS | 3464819 | 195 | - | 0.461538 |
| bfr | b3336 | bacterioferritin, iron storage and detoxification protein | chromosome | CDS | 3464271 | 477 | - | 0.431866 |
| bglA | b2901 | 6-phospho-beta-glucosidase A | chromosome | CDS | 3041684 | 1440 | + | 0.507639 |
| bglB | b3721 | cryptic phospho-beta-glucosidase B | chromosome | CDS | 3900312 | 1413 | - | 0.485492 |
| bglF | b3722 | fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component | chromosome | CDS | 3901743 | 1878 | - | 0.511715 |
| bglG | b3723 | transcriptional antiterminator of the bgl operon | chromosome | CDS | 3903754 | 837 | - | 0.428913 |
| bglH | b3720 | carbohydrate-specific outer membrane porin, cryptic | chromosome | CDS | 3898627 | 1617 | - | 0.451453 |
| bglJ | b4366 | DNA-binding transcriptional activator | chromosome | CDS | 4602237 | 624 | + | 0.456731 |
| bglX | b2132 | beta-D-glucoside glucohydrolase, periplasmic | chromosome | CDS | 2217714 | 2298 | - | 0.542211 |
| bioA | b0774 | adenosylmethionine--8-amino-7-oxononanoate transaminase | chromosome | CDS | 807191 | 1290 | - | 0.562791 |
| bioB | b0775 | biotin synthase | chromosome | CDS | 808567 | 1041 | + | 0.555235 |
| bioC | b0777 | predicted methltransferase, enzyme of biotin synthesis | chromosome | CDS | 810745 | 756 | + | 0.564815 |
| bioD | b0778 | dethiobiotin synthetase | chromosome | CDS | 811493 | 678 | + | 0.536873 |
| bioF | b0776 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 809604 | 1155 | + | 0.580087 |
| bioH | b3412 | carboxylesterase of pimeloyl-CoA synthesis | chromosome | CDS | 3542096 | 771 | - | 0.561608 |
| bipA | b3871 | GTP-binding protein | chromosome | CDS | 4056430 | 1824 | + | 0.534539 |
| birA | b3973 | biotin--protein ligase | chromosome | CDS | 4171105 | 966 | + | 0.493789 |
| bisC | b3551 | biotin sulfoxide reductase | chromosome | CDS | 3712084 | 2280 | - | 0.542982 |
| blc | b4149 | outer membrane lipoprotein (lipocalin) | chromosome | CDS | 4375212 | 534 | - | 0.533708 |
| blr | b4409 | beta-lactam resistance membrane protein | chromosome | CDS | 1702575 | 126 | + | 0.428571 |
| bolA | b0435 | regulator of penicillin binding proteins and beta lactamase transcription (morphogene) | chromosome | CDS | 453696 | 318 | + | 0.484277 |
| borD | b0557 | DLP12 prophage; predicted lipoprotein | chromosome | CDS | 577823 | 294 | - | 0.414966 |
| brnQ | b0401 | predicted branched chain amino acid transporter (LIV-II) | chromosome | CDS | 418815 | 1320 | + | 0.556061 |
| btuB | b3966 | vitamin B12/cobalamin outer membrane transporter | chromosome | CDS | 4161662 | 1845 | + | 0.502439 |
| btuC | b1711 | vtamin B12-transporter permease | chromosome | CDS | 1792196 | 981 | - | 0.554536 |
| btuD | b1709 | vitamin B12-transporter ATPase | chromosome | CDS | 1790833 | 750 | - | 0.552 |
| btuE | b1710 | predicted glutathione peroxidase | chromosome | CDS | 1791582 | 552 | - | 0.494565 |
| btuF | b0158 | vitamin B12-transporter protein BtuF | chromosome | CDS | 177662 | 801 | - | 0.529338 |
| btuR | b1270 | cob(I)yrinic acid a,c-diamide adenosyltransferase | chromosome | CDS | 1325791 | 591 | - | 0.502538 |
| cadA | b4131 | lysine decarboxylase 1 | chromosome | CDS | 4354493 | 2148 | - | 0.475791 |
| cadB | b4132 | predicted lysine/cadaverine transporter | chromosome | CDS | 4356720 | 1335 | - | 0.494382 |
| cadC | b4133 | DNA-binding transcriptional activator | chromosome | CDS | 4358419 | 1539 | - | 0.419753 |
| caiA | b0039 | crotonobetaine reductase subunit II, FAD-binding | chromosome | CDS | 39244 | 1143 | - | 0.538933 |
| caiB | b0038 | crotonobetainyl-CoA:carnitineCoA-transferase | chromosome | CDS | 37898 | 1218 | - | 0.526273 |
| caiC | b0037 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 36271 | 1569 | - | 0.509879 |
| caiD | b0036 | carnitinyl-CoA dehydratase | chromosome | CDS | 35377 | 894 | - | 0.52349 |
| caiE | b0035 | predicted acyl transferase | chromosome | CDS | 34781 | 591 | - | 0.549915 |
| caiF | b0034 | DNA-binding transcriptional activator | chromosome | CDS | 34300 | 396 | + | 0.459596 |
| caiT | b0040 | L-carnitine/gamma-butyrobetaine antiporter | chromosome | CDS | 40417 | 1515 | - | 0.518152 |
| can | b0126 | carbonic anhydrase | chromosome | CDS | 142008 | 663 | - | 0.506787 |
| carA | b0032 | carbamoyl-phosphate synthase small subunit | chromosome | CDS | 29651 | 1149 | + | 0.533507 |
| carB | b0033 | carbamoyl-phosphate synthase large subunit | chromosome | CDS | 30817 | 3222 | + | 0.562694 |
| cbl | b1987 | DNA-binding transcriptional activator of cysteine biosynthesis | chromosome | CDS | 2057988 | 951 | - | 0.48265 |
| cbpA | b1000 | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK | chromosome | CDS | 1062078 | 921 | - | 0.528773 |
| cbpM | b0999 | modulator of CbpA co-chaperone | chromosome | CDS | 1061773 | 306 | - | 0.542484 |
| cbrA | b3690 | predicted oxidoreductase with FAD/NAD(P)-binding domain | chromosome | CDS | 3867400 | 1065 | + | 0.514554 |
| cbrC | b3717 | hypothetical protein | chromosome | CDS | 3896045 | 588 | + | 0.445578 |
| cca | b3056 | fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase | chromosome | CDS | 3199913 | 1239 | + | 0.56255 |
| cchA | b2457 | predicted carboxysome structural protein, ethanolamine utilization protein | chromosome | CDS | 2570179 | 294 | - | 0.581633 |
| cchB | b2456 | predicted carboxysome structural protein, ethanolamine utilization protein | chromosome | CDS | 2569785 | 288 | - | 0.53125 |
| ccmA | b2201 | heme exporter subunit | chromosome | CDS | 2295043 | 624 | - | 0.559295 |
| ccmB | b2200 | heme exporter subunit | chromosome | CDS | 2294384 | 663 | - | 0.559578 |
| ccmC | b2199 | heme exporter subunit | chromosome | CDS | 2293605 | 738 | - | 0.552846 |
| ccmD | b2198 | cytochrome c biogenesis protein | chromosome | CDS | 2293399 | 210 | - | 0.571429 |
| ccmE | b2197 | periplasmic heme chaperone | chromosome | CDS | 2292923 | 480 | - | 0.535417 |
| ccmF | b2196 | heme lyase, CcmF subunit | chromosome | CDS | 2290983 | 1944 | - | 0.570988 |
| ccmG | b2195 | periplasmic thioredoxin of cytochrome c-type biogenesis | chromosome | CDS | 2290429 | 558 | - | 0.544803 |
| ccmH | b2194 | heme lyase, CcmH subunit | chromosome | CDS | 2289380 | 1053 | - | 0.540361 |
| cdaR | b0162 | DNA-binding transcriptional activator | chromosome | CDS | 182463 | 1158 | + | 0.528497 |
| cdd | b2143 | cytidine deaminase | chromosome | CDS | 2229866 | 885 | + | 0.546893 |
| cdh | b3918 | CDP-diacylglycerol pyrophosphatase | chromosome | CDS | 4107953 | 756 | + | 0.486772 |
| cedA | b1731 | cell division modulator | chromosome | CDS | 1811445 | 264 | - | 0.515152 |
| cfa | b1661 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) | chromosome | CDS | 1739437 | 1149 | + | 0.479547 |
| chaA | b1216 | calcium/sodium:proton antiporter | chromosome | CDS | 1269972 | 1101 | - | 0.487738 |
| chaB | b1217 | cation transport regulator | chromosome | CDS | 1271342 | 231 | + | 0.454545 |
| chaC | b1218 | regulatory protein for cation transport | chromosome | CDS | 1271709 | 717 | + | 0.546722 |
| chbA | b1736 | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS | chromosome | CDS | 1817479 | 351 | - | 0.498576 |
| chbB | b1738 | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS | chromosome | CDS | 1819323 | 321 | - | 0.439252 |
| chbC | b1737 | N,N'-diacetylchitobiose-specific enzyme IIC component of PTS | chromosome | CDS | 1817880 | 1359 | - | 0.492274 |
| chbF | b1734 | cryptic phospho-beta-glucosidase, NAD(P)-binding | chromosome | CDS | 1815172 | 1353 | - | 0.467849 |
| chbG | b1733 | hypothetical protein | chromosome | CDS | 1814410 | 750 | - | 0.514667 |
| chbR | b1735 | DNA-binding transcriptional dual regulator | chromosome | CDS | 1816629 | 843 | - | 0.415184 |
| cheA | b1888 | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein | chromosome | CDS | 1971384 | 1965 | - | 0.531298 |
| cheB | b1883 | chemotaxis-specific methylesterase | chromosome | CDS | 1965476 | 1050 | - | 0.542857 |
| cheR | b1884 | chemotaxis regulator, protein-glutamate methyltransferase | chromosome | CDS | 1966528 | 861 | - | 0.542393 |
| cheW | b1887 | purine-binding chemotaxis protein | chromosome | CDS | 1970860 | 504 | - | 0.519841 |
| cheY | b1882 | chemotaxis regulator transmitting signal to flagellar motor component | chromosome | CDS | 1965072 | 390 | - | 0.492308 |
| cheZ | b1881 | chemotaxis regulator, protein phosphatase for CheY | chromosome | CDS | 1964417 | 645 | - | 0.534884 |
| chiA | b3338 | periplasmic endochitinase | chromosome | CDS | 3465182 | 2694 | - | 0.503712 |
| chpA | b2782 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease | chromosome | CDS | 2908778 | 336 | - | 0.46131 |
| chpB | b4225 | toxin of the ChpB-ChpS toxin-antitoxin system | chromosome | CDS | 4446715 | 351 | + | 0.538462 |
| chpR | b2783 | antitoxin of the ChpA-ChpR toxin-antitoxin system | chromosome | CDS | 2909113 | 249 | - | 0.485944 |
| chpS | b4224 | antitoxin of the ChpB-ChpS toxin-antitoxin system | chromosome | CDS | 4446470 | 252 | + | 0.503968 |
| cirA | b2155 | ferric iron-catecholate outer membrane transporter | chromosome | CDS | 2242800 | 1992 | - | 0.52761 |
| citA | b0619 | sensory histidine kinase in two-component regulatory system with citB | chromosome | CDS | 651458 | 1659 | + | 0.500904 |
| citB | b0620 | DNA-binding response regulator in two-component regulatory system with citA | chromosome | CDS | 653085 | 681 | + | 0.50514 |
| citC | b0618 | citrate lyase synthetase | chromosome | CDS | 650021 | 1059 | - | 0.508971 |
| citD | b0617 | citrate lyase, acyl carrier (gamma) subunit | chromosome | CDS | 649710 | 297 | - | 0.558923 |
| citE | b0616 | citrate lyase, citryl-ACP lyase (beta) subunit | chromosome | CDS | 648805 | 909 | - | 0.575358 |
| citF | b0615 | citrate lyase, citrate-ACP transferase (alpha) subunit | chromosome | CDS | 647262 | 1533 | - | 0.563601 |
| citG | b0613 | triphosphoribosyl-dephospho-CoA transferase | chromosome | CDS | 645854 | 879 | - | 0.547213 |
| citT | b0612 | citrate:succinate antiporter | chromosome | CDS | 644340 | 1464 | - | 0.506148 |
| citX | b0614 | 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyase | chromosome | CDS | 646707 | 552 | - | 0.583333 |
| clcA | b0155 | chloride channel protein | chromosome | CDS | 175107 | 1422 | + | 0.538678 |
| clcB | b1592 | putative voltage-gated ClC-type chloride channel ClcB | chromosome | CDS | 1663339 | 1257 | + | 0.542562 |
| cld | b2027 | regulator of length of O-antigen component of lipopolysaccharide chains | chromosome | CDS | 2095345 | 981 | - | 0.458716 |
| clpA | b0882 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | chromosome | CDS | 922487 | 2277 | + | 0.526131 |
| clpB | b2592 | protein disaggregation chaperone | chromosome | CDS | 2729622 | 2574 | - | 0.514374 |
| clpP | b0437 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 455901 | 624 | + | 0.511218 |
| clpS | b0881 | ATP-dependent Clp protease adaptor protein ClpS | chromosome | CDS | 922136 | 321 | + | 0.451713 |
| clpX | b0438 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 456650 | 1275 | + | 0.515294 |
| cls | b1249 | cardiolipin synthetase | chromosome | CDS | 1305209 | 1461 | - | 0.516769 |
| cmk | b0910 | cytidylate kinase | chromosome | CDS | 960424 | 684 | + | 0.53655 |
| cmr | b0842 | multidrug efflux system protein | chromosome | CDS | 882896 | 1233 | + | 0.523925 |
| cmtA | b2933 | predicted fused mannitol-specific PTS enzymes: IIB component/IIC component | chromosome | CDS | 3075493 | 1389 | - | 0.4982 |
| cmtB | b2934 | predicted mannitol-specific enzyme IIA component of PTS | chromosome | CDS | 3076909 | 444 | - | 0.423423 |
| coaA | b3974 | pantothenate kinase | chromosome | CDS | 4172099 | 951 | - | 0.440589 |
| coaD | b3634 | phosphopantetheine adenylyltransferase | chromosome | CDS | 3807848 | 480 | + | 0.527083 |
| coaE | b0103 | dephospho-CoA kinase | chromosome | CDS | 112599 | 621 | - | 0.52657 |
| cobB | b1120 | NAD-dependent deacetylase | chromosome | CDS | 1178743 | 840 | + | 0.517857 |
| cobC | b0638 | predicted alpha-ribazole-5'-P phosphatase | chromosome | CDS | 668519 | 612 | - | 0.511438 |
| cobS | b1992 | cobalamin synthase | chromosome | CDS | 2062503 | 744 | - | 0.534946 |
| cobT | b1991 | nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase | chromosome | CDS | 2061412 | 1080 | - | 0.512963 |
| cobU | b1993 | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | chromosome | CDS | 2063243 | 546 | - | 0.505495 |
| codA | b0337 | cytosine deaminase | chromosome | CDS | 355395 | 1284 | + | 0.534268 |
| codB | b0336 | cytosine transporter | chromosome | CDS | 354146 | 1260 | + | 0.538889 |
| cof | b0446 | thiamin pyrimidine pyrophosphate hydrolase | chromosome | CDS | 466636 | 819 | + | 0.514042 |
| copA | b0484 | copper transporter | chromosome | CDS | 508099 | 2505 | - | 0.582834 |
| corA | b3816 | magnesium/nickel/cobalt transporter | chromosome | CDS | 3999449 | 951 | + | 0.526814 |
| cpdA | b3032 | cyclic 3',5'-adenosine monophosphate phosphodiesterase | chromosome | CDS | 3174028 | 828 | - | 0.565217 |
| cpdB | b4213 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein | chromosome | CDS | 4432645 | 1944 | - | 0.494856 |
| cpsB | b2049 | mannose-1-phosphate guanyltransferase | chromosome | CDS | 2121108 | 1437 | - | 0.551844 |
| cpsG | b2048 | phosphomannomutase | chromosome | CDS | 2119633 | 1371 | - | 0.550693 |
| cpxA | b3911 | two-component sensor protein | chromosome | CDS | 4101625 | 1374 | - | 0.545852 |
| cpxP | b4484 | periplasmic protein combats stress | chromosome | CDS | 4103843 | 501 | + | 0.500998 |
| cpxR | b3912 | DNA-binding response regulator in two-component regulatory system with CpxA | chromosome | CDS | 4102995 | 699 | - | 0.513591 |
| crcA | b0622 | palmitoyl transferase for Lipid A | chromosome | CDS | 655780 | 561 | + | 0.468806 |
| crcB | b0624 | camphor resistance protein CrcB | chromosome | CDS | 656778 | 384 | - | 0.484375 |
| creA | b4397 | hypothetical protein | chromosome | CDS | 4633544 | 474 | + | 0.489451 |
| creB | b4398 | DNA-binding response regulator in two-component regulatory system with CreC | chromosome | CDS | 4634030 | 690 | + | 0.552174 |
| creC | b4399 | sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon | chromosome | CDS | 4634719 | 1425 | + | 0.538947 |
| creD | b4400 | inner membrane protein | chromosome | CDS | 4636201 | 1353 | + | 0.495935 |
| crl | b0240 | DNA-binding transcriptional regulator | chromosome | CDS | 257829 | 402 | + | 0.504975 |
| crp | b3357 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3484142 | 633 | + | 0.494471 |
| crr | b2417 | glucose-specific PTS system enzyme IIA component | chromosome | CDS | 2533856 | 510 | + | 0.472549 |
| csdA | b2810 | cysteine sulfinate desulfinase | chromosome | CDS | 2941359 | 1206 | + | 0.558872 |
| csgA | b1042 | cryptic curlin major subunit | chromosome | CDS | 1103670 | 456 | + | 0.510965 |
| csgB | b1041 | curlin nucleator protein, minor subunit in curli complex | chromosome | CDS | 1103174 | 456 | + | 0.41886 |
| csgC | b1043 | predicted curli production protein | chromosome | CDS | 1104184 | 333 | + | 0.426426 |
| csgD | b1040 | DNA-binding transcriptional activator in two-component regulatory system | chromosome | CDS | 1101769 | 651 | - | 0.417819 |
| csgE | b1039 | predicted transport protein | chromosome | CDS | 1101375 | 390 | - | 0.430769 |
| csgF | b1038 | predicted transport protein | chromosome | CDS | 1100934 | 417 | - | 0.42446 |
| csgG | b1037 | outer membrane lipoprotein | chromosome | CDS | 1100074 | 834 | - | 0.501199 |
| csiE | b2535 | stationary phase inducible protein | chromosome | CDS | 2663457 | 1281 | + | 0.515222 |
| csiR | b2664 | DNA-binding transcriptional dual regulator | chromosome | CDS | 2793696 | 663 | + | 0.535445 |
| cspA | b3556 | major cold shock protein | chromosome | CDS | 3718072 | 213 | + | 0.483568 |
| cspB | b1557 | Qin prophage; cold shock protein | chromosome | CDS | 1639363 | 216 | - | 0.351852 |
| cspC | b1823 | stress protein, member of the CspA-family | chromosome | CDS | 1905250 | 210 | - | 0.466667 |
| cspD | b0880 | cold shock protein homolog | chromosome | CDS | 921589 | 225 | - | 0.484444 |
| cspE | b0623 | cold shock protein E | chromosome | CDS | 656515 | 210 | + | 0.438095 |
| cspF | b1558 | Qin prophage; cold shock protein | chromosome | CDS | 1639879 | 213 | + | 0.483568 |
| cspG | b0990 | DNA-binding transcriptional regulator | chromosome | CDS | 1050684 | 213 | + | 0.441315 |
| cspH | b0989 | stress protein, member of the CspA-family | chromosome | CDS | 1050186 | 213 | - | 0.469484 |
| cspI | b1552 | Qin prophage; cold shock protein | chromosome | CDS | 1636479 | 213 | - | 0.403756 |
| csrA | b2696 | carbon storage regulator | chromosome | CDS | 2816983 | 186 | - | 0.494624 |
| csrB | b4408 | regulatory sRNA | chromosome | misc_RNA | 2922178 | 360 | - | 0.511111 |
| csrC | b4457 | regulatory RNA | chromosome | misc_RNA | 4049059 | 245 | + | 0.485714 |
| cstA | b0598 | carbon starvation protein | chromosome | CDS | 629117 | 2106 | + | 0.572175 |
| cueO | b0123 | multicopper oxidase (laccase) | chromosome | CDS | 137083 | 1551 | + | 0.546744 |
| cueR | b0487 | DNA-binding transcriptional activator of copper-responsive regulon genes | chromosome | CDS | 513217 | 408 | + | 0.585784 |
| cusA | b0575 | copper/silver efflux system, membrane component | chromosome | CDS | 597937 | 3144 | + | 0.556934 |
| cusB | b0574 | copper/silver efflux system, membrane fusion protein | chromosome | CDS | 596702 | 1224 | + | 0.55719 |
| cusC | b0572 | copper/silver efflux system, outer membrane component | chromosome | CDS | 594823 | 1374 | + | 0.512373 |
| cusF | b0573 | periplasmic copper-binding protein | chromosome | CDS | 596354 | 333 | + | 0.453453 |
| cusR | b0571 | DNA-binding response regulator in two-component regulatory system with CusS | chromosome | CDS | 593983 | 684 | - | 0.538012 |
| cusS | b0570 | sensory histidine kinase in two-component regulatory system with CusR, senses copper ions | chromosome | CDS | 592551 | 1443 | - | 0.520443 |
| cutA | b4137 | copper binding protein, copper sensitivity | chromosome | CDS | 4363041 | 339 | - | 0.501475 |
| cutC | b1874 | copper homeostasis protein | chromosome | CDS | 1956544 | 747 | - | 0.519411 |
| cvpA | b2313 | membrane protein required for colicin V production | chromosome | CDS | 2428297 | 489 | - | 0.490798 |
| cvrA | b1191 | potassium/proton antiporter | chromosome | CDS | 1239558 | 1737 | - | 0.523316 |
| cyaA | b3806 | adenylate cyclase | chromosome | CDS | 3989176 | 2547 | + | 0.519435 |
| cyaY | b3807 | frataxin-like protein | chromosome | CDS | 3991762 | 321 | - | 0.538941 |
| cybB | b1418 | cytochrome b561 | chromosome | CDS | 1488926 | 531 | + | 0.47646 |
| cybC | b4236 | cytochrome b562, truncated (pseudogene) | chromosome | CDS | 4457576 | 303 | + | 0.50165 |
| cycA | b4208 | D-alanine/D-serine/glycine transporter | chromosome | CDS | 4427887 | 1413 | + | 0.525832 |
| cydA | b0733 | cytochrome d terminal oxidase, subunit I | chromosome | CDS | 770681 | 1569 | + | 0.528999 |
| cydB | b0734 | cytochrome d terminal oxidase, subunit II | chromosome | CDS | 772265 | 1140 | + | 0.538597 |
| cydC | b0886 | fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 926697 | 1722 | - | 0.537747 |
| cydD | b0887 | fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 928419 | 1767 | - | 0.536503 |
| cynR | b0338 | DNA-binding transcriptional dual regulator | chromosome | CDS | 357015 | 900 | - | 0.55 |
| cynS | b0340 | cyanate hydratase | chromosome | CDS | 358713 | 471 | + | 0.505308 |
| cynT | b0339 | carbonic anhydrase | chromosome | CDS | 358023 | 660 | + | 0.572727 |
| cynX | b0341 | predicted cyanate transporter | chromosome | CDS | 359216 | 1155 | + | 0.587013 |
| cyoA | b0432 | cytochrome o ubiquinol oxidase subunit II | chromosome | CDS | 449887 | 948 | - | 0.509494 |
| cyoB | b0431 | cytochrome o ubiquinol oxidase subunit I | chromosome | CDS | 447874 | 1992 | - | 0.529619 |
| cyoC | b0430 | cytochrome o ubiquinol oxidase subunit III | chromosome | CDS | 447270 | 615 | - | 0.534959 |
| cyoD | b0429 | cytochrome o ubiquinol oxidase subunit IV | chromosome | CDS | 446941 | 330 | - | 0.49697 |
| cyoE | b0428 | protoheme IX farnesyltransferase | chromosome | CDS | 446039 | 891 | - | 0.537598 |
| cysA | b2422 | sulfate/thiosulfate transporter subunit | chromosome | CDS | 2537739 | 1098 | - | 0.586521 |
| cysB | b1275 | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding | chromosome | CDS | 1331879 | 975 | + | 0.483077 |
| cysC | b2750 | adenylylsulfate kinase | chromosome | CDS | 2871409 | 606 | - | 0.524752 |
| cysD | b2752 | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 2873443 | 909 | - | 0.530253 |
| cysE | b3607 | serine acetyltransferase | chromosome | CDS | 3779764 | 822 | - | 0.53528 |
| cysG | b3368 | fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase | chromosome | CDS | 3495850 | 1374 | + | 0.546579 |
| cysH | b2762 | phosphoadenosine phosphosulfate reductase | chromosome | CDS | 2885600 | 735 | - | 0.507483 |
| cysI | b2763 | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | chromosome | CDS | 2886409 | 1713 | - | 0.56042 |
| cysJ | b2764 | sulfite reductase, alpha subunit, flavoprotein | chromosome | CDS | 2888121 | 1800 | - | 0.560556 |
| cysK | b2414 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit | chromosome | CDS | 2530431 | 972 | + | 0.503086 |
| cysM | b2421 | cysteine synthase B (O-acetylserine sulfhydrolase B) | chromosome | CDS | 2536694 | 912 | - | 0.564693 |
| cysN | b2751 | sulfate adenylyltransferase subunit 1 | chromosome | CDS | 2872014 | 1428 | - | 0.546219 |
| cysP | b2425 | thiosulfate transporter subunit | chromosome | CDS | 2540534 | 1017 | - | 0.537856 |
| cysQ | b4214 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase | chromosome | CDS | 4434778 | 741 | + | 0.551957 |
| cysS | b0526 | cysteinyl-tRNA synthetase | chromosome | CDS | 553834 | 1386 | + | 0.544733 |
| cysT | b1910 | tRNA-Cys | chromosome | tRNA | 1989938 | 74 | - | 0.567568 |
| cysU | b2424 | sulfate/thiosulfate transporter subunit | chromosome | CDS | 2539701 | 834 | - | 0.56235 |
| cysW | b2423 | sulfate/thiosulfate transporter subunit | chromosome | CDS | 2538826 | 876 | - | 0.56621 |
| cysZ | b2413 | putative sulfate transport protein CysZ | chromosome | CDS | 2529485 | 762 | + | 0.501312 |
| cytR | b3934 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4121454 | 1026 | - | 0.520468 |
| dacA | b0632 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) | chromosome | CDS | 661975 | 1212 | - | 0.493399 |
| dacB | b3182 | D-alanyl-D-alanine carboxypeptidase | chromosome | CDS | 3326985 | 1434 | + | 0.531381 |
| dacC | b0839 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) | chromosome | CDS | 879950 | 1203 | + | 0.517041 |
| dacD | b2010 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) | chromosome | CDS | 2079405 | 1167 | - | 0.492716 |
| dadA | b1189 | D-amino acid dehydrogenase small subunit | chromosome | CDS | 1236794 | 1299 | + | 0.562741 |
| dadX | b1190 | alanine racemase | chromosome | CDS | 1238102 | 1071 | + | 0.579832 |
| dam | b3387 | DNA adenine methylase | chromosome | CDS | 3513099 | 837 | - | 0.495818 |
| damX | b3388 | hypothetical protein | chromosome | CDS | 3514042 | 1287 | - | 0.545455 |
| dapA | b2478 | dihydrodipicolinate synthase | chromosome | CDS | 2596904 | 879 | - | 0.517634 |
| dapB | b0031 | dihydrodipicolinate reductase | chromosome | CDS | 28374 | 822 | + | 0.534063 |
| dapD | b0166 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase | chromosome | CDS | 185123 | 825 | - | 0.530909 |
| dapE | b2472 | succinyl-diaminopimelate desuccinylase | chromosome | CDS | 2589629 | 1128 | + | 0.534574 |
| dapF | b3809 | diaminopimelate epimerase | chromosome | CDS | 3992785 | 825 | + | 0.551515 |
| dbpA | b1343 | ATP-dependent RNA helicase, specific for 23S rRNA | chromosome | CDS | 1407535 | 1374 | + | 0.519651 |
| dcd | b2065 | deoxycytidine triphosphate deaminase | chromosome | CDS | 2139658 | 582 | - | 0.603093 |
| dcm | b1961 | DNA cytosine methylase | chromosome | CDS | 2028923 | 1419 | - | 0.521494 |
| dcp | b1538 | dipeptidyl carboxypeptidase II | chromosome | CDS | 1623359 | 2046 | - | 0.499511 |
| dcrB | b3472 | periplasmic protein | chromosome | CDS | 3607978 | 558 | + | 0.521505 |
| dctA | b3528 | C4-dicarboxylate transport protein | chromosome | CDS | 3680184 | 1287 | - | 0.516706 |
| dcuA | b4138 | C4-dicarboxylate antiporter | chromosome | CDS | 4363495 | 1302 | - | 0.526114 |
| dcuB | b4123 | C4-dicarboxylate antiporter | chromosome | CDS | 4345427 | 1341 | - | 0.522744 |
| dcuC | b0621 | anaerobic C4-dicarboxylate transport | chromosome | CDS | 653806 | 1386 | - | 0.50938 |
| dcuD | b3227 | predicted transporter | chromosome | CDS | 3372891 | 1368 | + | 0.510234 |
| dcuR | b4124 | DNA-binding response regulator in two-component regulatory system with DcuS | chromosome | CDS | 4347338 | 720 | - | 0.493056 |
| dcuS | b4125 | sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration | chromosome | CDS | 4348054 | 1632 | - | 0.499387 |
| ddg | b2378 | lipid A biosynthesis palmitoleoyl acyltransferase | chromosome | CDS | 2493667 | 921 | + | 0.514658 |
| ddlA | b0381 | D-alanylalanine synthetase | chromosome | CDS | 399053 | 1095 | - | 0.510502 |
| ddlB | b0092 | D-alanylalanine synthetase | chromosome | CDS | 102233 | 921 | + | 0.515744 |
| ddpA | b1487 | D-ala-D-a la transporter subunit | chromosome | CDS | 1558955 | 1551 | - | 0.503546 |
| ddpB | b1486 | D-ala-D-ala transporter subunit | chromosome | CDS | 1557931 | 1023 | - | 0.549365 |
| ddpC | b1485 | D-ala-D-ala transporter subunit | chromosome | CDS | 1557038 | 897 | - | 0.530658 |
| ddpD | b1484 | D-ala-D-ala transporter subunit | chromosome | CDS | 1556055 | 987 | - | 0.541033 |
| ddpF | b1483 | D-ala-D-ala transporter subunit | chromosome | CDS | 1555136 | 927 | - | 0.545847 |
| ddpX | b1488 | D-ala-D-ala dipeptidase, Zn-dependent | chromosome | CDS | 1560519 | 582 | - | 0.52921 |
| deaD | b3162 | ATP-dependent RNA helicase | chromosome | CDS | 3303993 | 1890 | - | 0.555556 |
| dedA | b2317 | conserved inner membrane protein | chromosome | CDS | 2432104 | 660 | - | 0.489394 |
| dedD | b2314 | hypothetical protein | chromosome | CDS | 2429044 | 663 | - | 0.570136 |
| def | b3287 | peptide deformylase | chromosome | CDS | 3431712 | 510 | + | 0.462745 |
| degP | b0161 | serine endoprotease (protease Do), membrane-associated | chromosome | CDS | 180884 | 1425 | + | 0.539649 |
| degQ | b3234 | serine endoprotease, periplasmic | chromosome | CDS | 3378765 | 1368 | + | 0.520468 |
| degS | b3235 | serine endoprotease, periplasmic | chromosome | CDS | 3380222 | 1068 | + | 0.527154 |
| deoA | b4382 | thymidine phosphorylase | chromosome | CDS | 4616252 | 1323 | + | 0.551776 |
| deoB | b4383 | phosphopentomutase | chromosome | CDS | 4617626 | 1224 | + | 0.543301 |
| deoC | b4381 | deoxyribose-phosphate aldolase | chromosome | CDS | 4615346 | 780 | + | 0.553846 |
| deoD | b4384 | purine nucleoside phosphorylase | chromosome | CDS | 4618906 | 720 | + | 0.523611 |
| deoR | b0840 | DNA-binding transcriptional repressor | chromosome | CDS | 881199 | 759 | - | 0.507246 |
| der | b2511 | GTP-binding protein EngA | chromosome | CDS | 2633906 | 1473 | - | 0.522064 |
| dfp | b3639 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | chromosome | CDS | 3810754 | 1221 | + | 0.536446 |
| dgkA | b4042 | diacylglycerol kinase | chromosome | CDS | 4254660 | 369 | + | 0.517615 |
| dgoA | b4477 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | chromosome | CDS | 3871018 | 618 | - | 0.593851 |
| dgoD | b4478 | galactonate dehydratase | chromosome | CDS | 3869873 | 1149 | - | 0.528285 |
| dgoK | b3693 | 2-oxo-3-deoxygalactonate kinase | chromosome | CDS | 3871619 | 879 | - | 0.541524 |
| dgoR | b4479 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3872494 | 690 | - | 0.553623 |
| dgoT | b3691 | D-galactonate transporter | chromosome | CDS | 3868461 | 1293 | - | 0.529776 |
| dgsA | b1594 | DNA-binding transcriptional repressor | chromosome | CDS | 1665368 | 1221 | - | 0.522523 |
| dgt | b0160 | deoxyguanosinetriphosphate triphosphohydrolase | chromosome | CDS | 179237 | 1518 | + | 0.479578 |
| dhaH | b1198 | fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component | chromosome | CDS | 1246919 | 1419 | - | 0.501762 |
| dhaK | b1200 | dihydroxyacetone kinase, N-terminal domain | chromosome | CDS | 1248991 | 1071 | - | 0.530345 |
| dhaL | b1199 | dihydroxyacetone kinase, C-terminal domain | chromosome | CDS | 1248348 | 633 | - | 0.535545 |
| dhaR | b1201 | predicted DNA-binding transcriptional regulator, dihydroxyacetone | chromosome | CDS | 1250289 | 1920 | + | 0.514583 |
| dicA | b1570 | Qin prophage; predicted regulator for DicB | chromosome | CDS | 1645958 | 408 | + | 0.436274 |
| dicB | b1575 | Qin prophage; cell division inhibition protein | chromosome | CDS | 1647633 | 189 | + | 0.359788 |
| dicC | b1569 | Qin prophage; DNA-binding transcriptional regulator for DicB | chromosome | CDS | 1645644 | 231 | - | 0.467532 |
| dicF | b1574 | antisense RNA DicF | chromosome | misc_RNA | 1647406 | 53 | + | 0.54717 |
| dinB | b0231 | DNA polymerase IV | chromosome | CDS | 250898 | 1056 | + | 0.541667 |
| dinD | b3645 | DNA-damage-inducible protein | chromosome | CDS | 3815783 | 825 | + | 0.458182 |
| dinF | b4044 | DNA-damage-inducible SOS response protein | chromosome | CDS | 4255765 | 1380 | + | 0.557246 |
| dinG | b0799 | ATP-dependent DNA helicase | chromosome | CDS | 832293 | 2151 | + | 0.540679 |
| dinI | b1061 | DNA damage-inducible protein I | chromosome | CDS | 1120465 | 246 | - | 0.479675 |
| dinJ | b0226 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system | chromosome | CDS | 246242 | 261 | - | 0.467433 |
| dipZ | b4136 | thiol:disulfide interchange protein precursor | chromosome | CDS | 4361368 | 1698 | - | 0.54417 |
| djlA | b0055 | Dna-J like membrane chaperone protein | chromosome | CDS | 57364 | 816 | + | 0.526961 |
| djlB | b0646 | predicted chaperone | chromosome | CDS | 676638 | 1428 | + | 0.47479 |
| djlC | b0649 | Hsc56 co-chaperone of HscC | chromosome | CDS | 679435 | 1452 | + | 0.477273 |
| dkgA | b3012 | 2,5-diketo-D-gluconate reductase A | chromosome | CDS | 3154645 | 828 | + | 0.513285 |
| dkgB | b0207 | 2,5-diketo-D-gluconate reductase B | chromosome | CDS | 229167 | 804 | + | 0.462687 |
| dksA | b0145 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein | chromosome | CDS | 160149 | 456 | - | 0.526316 |
| dld | b2133 | D-lactate dehydrogenase, FAD-binding, NADH independent | chromosome | CDS | 2220207 | 1716 | + | 0.522144 |
| dmsA | b0894 | dimethyl sulfoxide reductase, anaerobic, subunit A | chromosome | CDS | 940182 | 2445 | + | 0.527198 |
| dmsB | b0895 | dimethyl sulfoxide reductase, anaerobic, subunit B | chromosome | CDS | 942637 | 618 | + | 0.517799 |
| dmsC | b0896 | dimethyl sulfoxide reductase, anaerobic, subunit C | chromosome | CDS | 943256 | 864 | + | 0.546296 |
| dmsD | b1591 | twin-argninine leader-binding protein for DmsA and TorA | chromosome | CDS | 1662530 | 615 | + | 0.533333 |
| dnaA | b3702 | chromosomal replication initiation protein | chromosome | CDS | 3880349 | 1404 | - | 0.540598 |
| dnaB | b4052 | replicative DNA helicase | chromosome | CDS | 4262337 | 1416 | + | 0.538136 |
| dnaC | b4361 | DNA biosynthesis protein | chromosome | CDS | 4598261 | 738 | - | 0.50542 |
| dnaE | b0184 | DNA polymerase III subunit alpha | chromosome | CDS | 205126 | 3483 | + | 0.549526 |
| dnaG | b3066 | DNA primase | chromosome | CDS | 3209129 | 1746 | + | 0.52291 |
| dnaJ | b0015 | chaperone Hsp40, co-chaperone with DnaK | chromosome | CDS | 14168 | 1131 | + | 0.551724 |
| dnaK | b0014 | molecular chaperone DnaK | chromosome | CDS | 12163 | 1917 | + | 0.511215 |
| dnaN | b3701 | DNA polymerase III subunit beta | chromosome | CDS | 3879244 | 1101 | - | 0.542234 |
| dnaQ | b0215 | DNA polymerase III subunit epsilon | chromosome | CDS | 236067 | 732 | + | 0.501366 |
| dnaT | b4362 | primosomal protein I | chromosome | CDS | 4599001 | 540 | - | 0.57037 |
| dnaX | b0470 | DNA polymerase III subunits gamma and tau | chromosome | CDS | 491316 | 1932 | + | 0.576605 |
| dos | b1489 | cAMP phosphodiesterase, heme-regulated | chromosome | CDS | 1561358 | 2400 | - | 0.502083 |
| dppA | b3544 | dipeptide transporter | chromosome | CDS | 3704121 | 1608 | - | 0.515547 |
| dppB | b3543 | dipeptide transporter | chromosome | CDS | 3702794 | 1020 | - | 0.564706 |
| dppC | b3542 | dipeptide transporter | chromosome | CDS | 3701882 | 903 | - | 0.590255 |
| dppD | b3541 | dipeptide transporter | chromosome | CDS | 3700888 | 984 | - | 0.567073 |
| dppF | b3540 | dipeptide transporter | chromosome | CDS | 3699887 | 1005 | - | 0.561194 |
| dps | b0812 | DNA protection during starvation conditions | chromosome | CDS | 847631 | 504 | - | 0.490079 |
| dsbA | b3860 | periplasmic protein disulfide isomerase I | chromosome | CDS | 4041441 | 627 | + | 0.480064 |
| dsbB | b1185 | disulfide bond formation protein B | chromosome | CDS | 1231723 | 531 | - | 0.527307 |
| dsbC | b2893 | protein disulfide isomerase II | chromosome | CDS | 3036134 | 711 | - | 0.483826 |
| dsbG | b0604 | periplasmic disulfide isomerase/thiol-disulphide oxidase | chromosome | CDS | 637050 | 747 | - | 0.468541 |
| dsdA | b2366 | D-serine dehydratase | chromosome | CDS | 2477224 | 1329 | + | 0.508653 |
| dsdC | b2364 | DNA-binding transcriptional dual regulator | chromosome | CDS | 2474716 | 936 | - | 0.480769 |
| dsdX | b2365 | predicted transporter | chromosome | CDS | 2475869 | 1338 | + | 0.487294 |
| dsrA | b1954 | regulatory antisense RNA | chromosome | misc_RNA | 2023251 | 87 | - | 0.436782 |
| dsrB | b1952 | hypothetical protein | chromosome | CDS | 2022659 | 189 | - | 0.513228 |
| dtd | b3887 | D-tyrosyl-tRNA deacylase | chromosome | CDS | 4075038 | 438 | + | 0.550228 |
| dusB | b3260 | tRNA-dihydrouridine synthase B | chromosome | CDS | 3408302 | 966 | + | 0.522774 |
| dusC | b2140 | tRNA-dihydrouridine synthase C | chromosome | CDS | 2227460 | 948 | - | 0.542194 |
| dut | b3640 | deoxyuridine 5'-triphosphate nucleotidohydrolase | chromosome | CDS | 3811955 | 456 | + | 0.546053 |
| dxr | b0173 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | chromosome | CDS | 193521 | 1197 | + | 0.526316 |
| dxs | b0420 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 437539 | 1863 | - | 0.542673 |
| eaeH | b0297 | attaching and effacing protein, pathogenesis factor | chromosome | CDS | 313581 | 888 | + | 0.483108 |
| eamA | b1533 | cysteine and O-acetyl-L-serine efflux system | chromosome | CDS | 1618262 | 900 | - | 0.497778 |
| ebgA | b3076 | cryptic beta-D-galactosidase, alpha subunit | chromosome | CDS | 3220655 | 3093 | + | 0.545425 |
| ebgC | b3077 | cryptic beta-D-galactosidase, beta subunit | chromosome | CDS | 3223744 | 450 | + | 0.455556 |
| ebgR | b3075 | DNA-binding transcriptional repressor | chromosome | CDS | 3219488 | 984 | + | 0.517276 |
| ecnA | b4410 | entericidin A membrane lipoprotein, antidote entericidin B | chromosome | CDS | 4374340 | 126 | + | 0.539683 |
| ecnB | b4411 | entericidin B membrane lipoprotein | chromosome | CDS | 4374576 | 147 | + | 0.482993 |
| eco | b2209 | ecotin precursor | chromosome | CDS | 2301927 | 489 | + | 0.494888 |
| ecpD | b0140 | predicted periplasmic pilin chaperone | chromosome | CDS | 155461 | 741 | - | 0.443995 |
| eda | b1850 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase | chromosome | CDS | 1930139 | 642 | - | 0.562305 |
| edd | b1851 | phosphogluconate dehydratase | chromosome | CDS | 1930817 | 1812 | - | 0.536424 |
| efp | b4147 | elongation factor P | chromosome | CDS | 4373722 | 567 | + | 0.493827 |
| elaA | b2267 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 2379104 | 462 | - | 0.478355 |
| elaB | b2266 | hypothetical protein | chromosome | CDS | 2378744 | 306 | - | 0.519608 |
| elaC | b2268 | ribonuclease Z | chromosome | CDS | 2379630 | 918 | + | 0.507625 |
| elaD | b2269 | predicted enzyme | chromosome | CDS | 2380735 | 1212 | + | 0.35396 |
| elbA | b1160 | hypothetical protein | chromosome | CDS | 1210903 | 324 | - | 0.339506 |
| elbB | b3209 | isoprenoid biosynthesis protein with amidotransferase-like domain | chromosome | CDS | 3347828 | 654 | - | 0.527523 |
| emrA | b2685 | multidrug efflux system | chromosome | CDS | 2809449 | 1173 | + | 0.533674 |
| emrB | b2686 | multidrug efflux system protein | chromosome | CDS | 2810638 | 1539 | + | 0.565952 |
| emrD | b3673 | multidrug efflux system protein | chromosome | CDS | 3851945 | 1185 | + | 0.571308 |
| emrE | b0543 | multidrug efflux protein | chromosome | CDS | 567538 | 333 | + | 0.411411 |
| emrK | b2368 | EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component | chromosome | CDS | 2480198 | 1164 | - | 0.419244 |
| emrY | b2367 | predicted multidrug efflux system | chromosome | CDS | 2478660 | 1539 | - | 0.416504 |
| emtA | b1193 | lytic murein endotransglycosylase E | chromosome | CDS | 1242403 | 612 | + | 0.519608 |
| endA | b2945 | DNA-specific endonuclease I | chromosome | CDS | 3088369 | 708 | + | 0.548023 |
| eno | b2779 | phosphopyruvate hydratase | chromosome | CDS | 2904665 | 1299 | - | 0.503464 |
| entA | b0596 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 627774 | 747 | + | 0.579652 |
| entB | b0595 | isochorismatase | chromosome | CDS | 626917 | 858 | + | 0.553613 |
| entC | b0593 | isochorismate synthase | chromosome | CDS | 624108 | 1176 | + | 0.564626 |
| entD | b0583 | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex | chromosome | CDS | 608682 | 630 | - | 0.474603 |
| entE | b0594 | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex | chromosome | CDS | 625293 | 1611 | + | 0.560521 |
| entF | b0586 | enterobactin synthase multienzyme complex component, ATP-dependent | chromosome | CDS | 613380 | 3882 | + | 0.56543 |
| envC | b3613 | protease with a role in cell division | chromosome | CDS | 3784861 | 1260 | + | 0.570635 |
| envR | b3264 | DNA-binding transcriptional regulator | chromosome | CDS | 3410825 | 663 | - | 0.441931 |
| envY | b0566 | DNA-binding transcriptional activator of porin biosynthesis | chromosome | CDS | 585370 | 762 | - | 0.463255 |
| envZ | b3404 | osmolarity sensor protein | chromosome | CDS | 3532538 | 1353 | - | 0.570584 |
| epd | b2927 | D-erythrose 4-phosphate dehydrogenase | chromosome | CDS | 3070694 | 1020 | - | 0.514706 |
| eptA | b4114 | predicted metal dependent hydrolase | chromosome | CDS | 4331970 | 1644 | - | 0.494526 |
| eptB | b3546 | predicted metal dependent hydrolase | chromosome | CDS | 3706807 | 1692 | - | 0.504137 |
| era | b2566 | GTP-binding protein Era | chromosome | CDS | 2700503 | 906 | - | 0.523179 |
| erfK | b1990 | conserved protein with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2060415 | 933 | - | 0.496249 |
| essD | b0554 | DLP12 prophage; predicted phage lysis protein | chromosome | CDS | 576621 | 216 | + | 0.476852 |
| essQ | b1556 | Qin prophage; predicted S lysis protein | chromosome | CDS | 1638394 | 216 | - | 0.462963 |
| etp | b0982 | phosphotyrosine-protein phosphatase | chromosome | CDS | 1043453 | 447 | - | 0.52349 |
| eutA | b2451 | reactivating factor for ethanolamine ammonia lyase | chromosome | CDS | 2563503 | 1404 | - | 0.591168 |
| eutB | b2441 | ethanolamine ammonia-lyase, large subunit, heavy chain | chromosome | CDS | 2555340 | 1362 | - | 0.556535 |
| eutC | b2440 | ethanolamine ammonia-lyase small subunit | chromosome | CDS | 2554432 | 888 | - | 0.566441 |
| eutE | b2455 | predicted aldehyde dehydrogenase, ethanolamine utilization protein | chromosome | CDS | 2568370 | 1404 | - | 0.571225 |
| eutG | b2453 | predicted alcohol dehydrogenase in ethanolamine utilization | chromosome | CDS | 2566346 | 1188 | - | 0.585859 |
| eutH | b2452 | predicted inner membrane protein | chromosome | CDS | 2564903 | 1227 | - | 0.551752 |
| eutI | b2458 | predicted phosphotransacetylase subunit | chromosome | CDS | 2570511 | 1017 | - | 0.582104 |
| eutJ | b2454 | predicted chaperonin, ethanolamine utilization protein | chromosome | CDS | 2567523 | 837 | - | 0.586619 |
| eutL | b2439 | predicted carboxysome structural protein with predicted role in ethanolamine utilization | chromosome | CDS | 2553763 | 660 | - | 0.563636 |
| eutP | b2461 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 2573000 | 480 | - | 0.497917 |
| eutQ | b2460 | hypothetical protein | chromosome | CDS | 2572324 | 702 | - | 0.559829 |
| eutT | b2459 | predicted cobalamin adenosyltransferase in ethanolamine utilization | chromosome | CDS | 2571524 | 804 | - | 0.585821 |
| evgA | b2369 | DNA-binding response regulator in two-component regulatory system with EvgS | chromosome | CDS | 2481777 | 615 | + | 0.4 |
| evgS | b2370 | hybrid sensory histidine kinase in two-component regulatory system with EvgA | chromosome | CDS | 2482396 | 3594 | + | 0.40818 |
| exbB | b3006 | membrane spanning protein in TonB-ExbB-ExbD complex | chromosome | CDS | 3149272 | 735 | - | 0.530612 |
| exbD | b3005 | membrane spanning protein in TonB-ExbB-ExbD complex | chromosome | CDS | 3148840 | 426 | - | 0.502347 |
| exo | b2798 | exonuclease IX | chromosome | CDS | 2928987 | 846 | + | 0.527187 |
| exoX | b1844 | exodeoxyribonuclease X | chromosome | CDS | 1924144 | 663 | + | 0.518854 |
| exuR | b3094 | DNA-binding transcriptional repressor | chromosome | CDS | 3244674 | 777 | + | 0.505791 |
| exuT | b3093 | hexuronate transporter | chromosome | CDS | 3243126 | 1419 | + | 0.542636 |
| fabA | b0954 | 3-hydroxydecanoyl-ACP dehydratase | chromosome | CDS | 1015175 | 519 | - | 0.531792 |
| fabB | b2323 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2438407 | 1221 | - | 0.56593 |
| fabD | b1092 | acyl carrier protein S-malonyltransferase | chromosome | CDS | 1148951 | 930 | + | 0.551613 |
| fabF | b1095 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1151162 | 1242 | + | 0.533011 |
| fabG | b1093 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1149893 | 735 | + | 0.515646 |
| fabH | b1091 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1147982 | 954 | + | 0.54717 |
| fabI | b1288 | enoyl-(acyl carrier protein) reductase | chromosome | CDS | 1348275 | 789 | - | 0.532319 |
| fabR | b3963 | DNA-binding transcriptional repressor | chromosome | CDS | 4159090 | 705 | + | 0.526241 |
| fabZ | b0180 | (3R)-hydroxymyristoyl ACP dehydratase | chromosome | CDS | 202101 | 456 | + | 0.504386 |
| fadA | b3845 | acetyl-CoA acetyltransferase | chromosome | CDS | 4025632 | 1164 | - | 0.57732 |
| fadB | b3846 | fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase | chromosome | CDS | 4026805 | 2190 | - | 0.552055 |
| fadD | b1805 | acyl-CoA synthase | chromosome | CDS | 1886085 | 1686 | - | 0.511862 |
| fadE | b0221 | acyl-CoA dehydrogenase | chromosome | CDS | 240859 | 2445 | - | 0.568916 |
| fadH | b3081 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked | chromosome | CDS | 3229687 | 2019 | + | 0.572065 |
| fadL | b2344 | long-chain fatty acid outer membrane transporter | chromosome | CDS | 2459322 | 1347 | + | 0.498144 |
| fadR | b1187 | fatty acid metabolism regulator | chromosome | CDS | 1234161 | 720 | + | 0.5125 |
| fbaA | b2925 | fructose-bisphosphate aldolase | chromosome | CDS | 3068187 | 1080 | - | 0.511111 |
| fbaB | b2097 | fructose-bisphosphate aldolase | chromosome | CDS | 2175534 | 1053 | - | 0.511871 |
| fbp | b4232 | fructose-1,6-bisphosphatase | chromosome | CDS | 4452634 | 999 | - | 0.514515 |
| fcl | b2052 | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase | chromosome | CDS | 2124249 | 966 | - | 0.564182 |
| fdhD | b3895 | formate dehydrogenase accessory protein | chromosome | CDS | 4084039 | 834 | + | 0.531175 |
| fdhE | b3891 | formate dehydrogenase accessory protein FdhE | chromosome | CDS | 4078322 | 930 | - | 0.546237 |
| fdhF | b4079 | formate dehydrogenase-H, selenopolypeptide subunit | chromosome | CDS | 4295242 | 2148 | - | 0.543762 |
| fdnG | b1474 | formate dehydrogenase-N, alpha subunit, nitrate-inducible | chromosome | CDS | 1545425 | 3048 | + | 0.541667 |
| fdnH | b1475 | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible | chromosome | CDS | 1548485 | 885 | + | 0.550282 |
| fdnI | b1476 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible | chromosome | CDS | 1549362 | 654 | + | 0.496942 |
| fdoG | b3894 | formate dehydrogenase-O, large subunit | chromosome | CDS | 4080795 | 3051 | - | 0.550967 |
| fdoH | b3893 | formate dehydrogenase-O, Fe-S subunit | chromosome | CDS | 4079880 | 903 | - | 0.554817 |
| fdoI | b3892 | formate dehydrogenase-O, cytochrome b556 subunit | chromosome | CDS | 4079248 | 636 | - | 0.525157 |
| fdrA | b0518 | membrane protein FdrA | chromosome | CDS | 545904 | 1668 | + | 0.555755 |
| fdx | b2525 | [2Fe-2S] ferredoxin | chromosome | CDS | 2654770 | 336 | - | 0.517857 |
| feaB | b1385 | phenylacetaldehyde dehydrogenase | chromosome | CDS | 1445543 | 1500 | + | 0.534 |
| feaR | b1384 | DNA-binding transcriptional dual regulator | chromosome | CDS | 1444402 | 906 | - | 0.485651 |
| fecA | b4291 | KpLE2 phage-like element; ferric citrate outer membrane transporter | chromosome | CDS | 4512376 | 2325 | - | 0.585376 |
| fecB | b4290 | KpLE2 phage-like element; iron-dicitrate transporter subunit | chromosome | CDS | 4511429 | 903 | - | 0.576966 |
| fecC | b4289 | KpLE2 phage-like element; iron-dicitrate transporter subunit | chromosome | CDS | 4510434 | 999 | - | 0.606607 |
| fecD | b4288 | KpLE2 phage-like element; iron-dicitrate transporter subunit | chromosome | CDS | 4509481 | 957 | - | 0.597701 |
| fecE | b4287 | KpLE2 phage-like element; iron-dicitrate transporter subunit | chromosome | CDS | 4508713 | 768 | - | 0.540365 |
| fecI | b4293 | KpLE2 phage-like element; RNA polymerase, sigma 19 factor | chromosome | CDS | 4515737 | 522 | - | 0.545977 |
| fecR | b4292 | KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport | chromosome | CDS | 4514787 | 954 | - | 0.590147 |
| feoA | b3408 | ferrous iron transport protein A | chromosome | CDS | 3538185 | 228 | + | 0.486842 |
| feoB | b3409 | ferrous iron transport protein B | chromosome | CDS | 3538429 | 2322 | + | 0.547373 |
| fepA | b0584 | iron-enterobactin outer membrane transporter | chromosome | CDS | 609477 | 2241 | - | 0.54083 |
| fepB | b0592 | iron-enterobactin transporter subunit | chromosome | CDS | 622777 | 957 | - | 0.550679 |
| fepC | b0588 | iron-enterobactin transporter subunit | chromosome | CDS | 618607 | 816 | - | 0.539216 |
| fepD | b0590 | iron-enterobactin transporter subunit | chromosome | CDS | 620408 | 1005 | - | 0.60995 |
| fepE | b0587 | regulator of length of O-antigen component of lipopolysaccharide chains | chromosome | CDS | 617477 | 1134 | + | 0.449735 |
| fepG | b0589 | iron-enterobactin transporter subunit | chromosome | CDS | 619419 | 993 | - | 0.582075 |
| fes | b0585 | enterobactin/ferric enterobactin esterase | chromosome | CDS | 612038 | 1125 | + | 0.550222 |
| ffh | b2610 | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) | chromosome | CDS | 2744456 | 1362 | - | 0.54185 |
| ffs | b0455 | 4.5S RNA | chromosome | misc_RNA | 475672 | 114 | + | 0.640351 |
| fhiA | b0229 | flagellar system protein, promoterless fragment (pseudogene) | chromosome | CDS | 248358 | 1713 | - | 0.580269 |
| fhlA | b2731 | DNA-binding transcriptional activator | chromosome | CDS | 2852360 | 2079 | + | 0.525734 |
| fhuA | b0150 | ferrichrome outer membrane transporter | chromosome | CDS | 167484 | 2244 | + | 0.512478 |
| fhuB | b0153 | fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components | chromosome | CDS | 171462 | 1983 | + | 0.597579 |
| fhuC | b0151 | iron-hydroxamate transporter subunit | chromosome | CDS | 169778 | 798 | + | 0.568922 |
| fhuD | b0152 | iron-hydroxamate transporter subunit | chromosome | CDS | 170575 | 891 | + | 0.546577 |
| fhuE | b1102 | ferric-rhodotorulic acid outer membrane transporter | chromosome | CDS | 1158585 | 2190 | - | 0.5 |
| fhuF | b4367 | ferric iron reductase involved in ferric hydroximate transport | chromosome | CDS | 4602898 | 789 | - | 0.531052 |
| fic | b3361 | stationary-phase protein, cell division | chromosome | CDS | 3488883 | 603 | - | 0.53068 |
| fieF | b3915 | ferrous iron efflux protein F | chromosome | CDS | 4104492 | 903 | + | 0.521595 |
| fimA | b4314 | major type 1 subunit fimbrin (pilin) | chromosome | CDS | 4541138 | 549 | + | 0.517304 |
| fimB | b4312 | tyrosine recombinase/inversion of on/off regulator of fimA | chromosome | CDS | 4538980 | 603 | + | 0.434494 |
| fimC | b4316 | chaperone, periplasmic | chromosome | CDS | 4542327 | 726 | + | 0.444904 |
| fimD | b4317 | outer membrane usher protein, type 1 fimbrial synthesis | chromosome | CDS | 4543119 | 2637 | + | 0.486159 |
| fimE | b4313 | tyrosine recombinase/inversion of on/off regulator of fimA | chromosome | CDS | 4540060 | 597 | + | 0.469012 |
| fimF | b4318 | minor component of type 1 fimbriae | chromosome | CDS | 4545765 | 531 | + | 0.495292 |
| fimG | b4319 | minor component of type 1 fimbriae | chromosome | CDS | 4546308 | 504 | + | 0.52381 |
| fimH | b4320 | minor component of type 1 fimbriae | chromosome | CDS | 4546831 | 903 | + | 0.501661 |
| fimI | b4315 | fimbrial protein involved in type 1 pilus biosynthesis | chromosome | CDS | 4541751 | 540 | + | 0.492593 |
| fimZ | b0535 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 563071 | 633 | - | 0.366509 |
| fis | b3261 | DNA-binding protein Fis | chromosome | CDS | 3409293 | 297 | + | 0.47138 |
| fiu | b0805 | predicted iron outer membrane transporter | chromosome | CDS | 838472 | 2283 | - | 0.538327 |
| fixA | b0041 | predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain | chromosome | CDS | 42403 | 771 | + | 0.525292 |
| fixB | b0042 | predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like | chromosome | CDS | 43188 | 942 | + | 0.566879 |
| fixC | b0043 | predicted oxidoreductase with FAD/NAD(P)-binding domain | chromosome | CDS | 44180 | 1287 | + | 0.54934 |
| fixX | b0044 | predicted 4Fe-4S ferredoxin-type protein | chromosome | CDS | 45463 | 288 | + | 0.569444 |
| fklB | b4207 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 4426958 | 621 | + | 0.557166 |
| fkpA | b3347 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 3474629 | 813 | - | 0.482165 |
| fkpB | b0028 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 25826 | 450 | + | 0.544444 |
| fldA | b0684 | flavodoxin 1 | chromosome | CDS | 710158 | 531 | - | 0.489642 |
| fldB | b2895 | flavodoxin 2 | chromosome | CDS | 3037877 | 522 | + | 0.51341 |
| flgA | b1072 | flagellar basal body P-ring biosynthesis protein A | chromosome | CDS | 1129427 | 660 | - | 0.522727 |
| flgB | b1073 | flagellar basal-body rod protein B | chromosome | CDS | 1130241 | 417 | + | 0.534772 |
| flgC | b1074 | flagellar basal-body rod protein C | chromosome | CDS | 1130661 | 405 | + | 0.528395 |
| flgD | b1075 | flagellar basal body rod modification protein D | chromosome | CDS | 1131077 | 696 | + | 0.545977 |
| flgE | b1076 | flagellar hook protein E | chromosome | CDS | 1131797 | 1209 | + | 0.515302 |
| flgF | b1077 | flagellar component of cell-proximal portion of basal-body rod | chromosome | CDS | 1133025 | 756 | + | 0.59127 |
| flgG | b1078 | flagellar component of cell-distal portion of basal-body rod | chromosome | CDS | 1133952 | 783 | + | 0.537676 |
| flgH | b1079 | flagellar L-ring protein precursor H | chromosome | CDS | 1134787 | 699 | + | 0.53505 |
| flgI | b1080 | flagellar P-ring protein precursor I | chromosome | CDS | 1135497 | 1098 | + | 0.541894 |
| flgJ | b1081 | flagellar biosynthesis protein FlgJ | chromosome | CDS | 1136594 | 942 | + | 0.546709 |
| flgK | b1082 | flagellar hook-associated protein K | chromosome | CDS | 1137601 | 1644 | + | 0.518248 |
| flgL | b1083 | flagellar hook-associated protein L | chromosome | CDS | 1139256 | 954 | + | 0.507338 |
| flgM | b1071 | anti-sigma factor for FliA (sigma 28) | chromosome | CDS | 1129058 | 294 | - | 0.527211 |
| flgN | b1070 | export chaperone for FlgK and FlgL | chromosome | CDS | 1128637 | 417 | - | 0.482014 |
| flhA | b1879 | flagellar biosynthesis protein A | chromosome | CDS | 1960996 | 2079 | - | 0.548822 |
| flhB | b1880 | flagellar biosynthesis protein B | chromosome | CDS | 1963067 | 1149 | - | 0.549173 |
| flhC | b1891 | DNA-binding transcriptional dual regulator with FlhD | chromosome | CDS | 1975290 | 579 | - | 0.490501 |
| flhD | b1892 | transcriptional activator FlhD | chromosome | CDS | 1975871 | 360 | - | 0.463889 |
| flhE | b1878 | hypothetical protein | chromosome | CDS | 1960604 | 393 | - | 0.526718 |
| fliA | b1922 | flagellar biosynthesis sigma factor | chromosome | CDS | 1999094 | 720 | - | 0.541667 |
| fliC | b1923 | flagellin | chromosome | CDS | 2000134 | 1497 | - | 0.47495 |
| fliD | b1924 | flagellar capping protein | chromosome | CDS | 2001896 | 1407 | + | 0.522388 |
| fliE | b1937 | flagellar hook-basal body protein FliE | chromosome | CDS | 2010724 | 315 | - | 0.539683 |
| fliF | b1938 | flagellar M-ring protein | chromosome | CDS | 2011253 | 1659 | + | 0.546112 |
| fliG | b1939 | flagellar motor switch protein G | chromosome | CDS | 2012904 | 996 | + | 0.556225 |
| fliH | b1940 | flagellar assembly protein H | chromosome | CDS | 2013892 | 687 | + | 0.570597 |
| fliI | b1941 | flagellum-specific ATP synthase | chromosome | CDS | 2014578 | 1374 | + | 0.585881 |
| fliJ | b1942 | flagellar biosynthesis chaperone | chromosome | CDS | 2015970 | 444 | + | 0.515766 |
| fliK | b1943 | flagellar hook-length control protein | chromosome | CDS | 2016410 | 1128 | + | 0.548759 |
| fliL | b1944 | flagellar basal body-associated protein FliL | chromosome | CDS | 2017642 | 465 | + | 0.533333 |
| fliM | b1945 | flagellar motor switch protein M | chromosome | CDS | 2018111 | 1005 | + | 0.533333 |
| fliN | b1946 | flagellar motor switch protein | chromosome | CDS | 2019112 | 414 | + | 0.550725 |
| fliO | b1947 | flagellar biosynthesis protein | chromosome | CDS | 2019528 | 366 | + | 0.546448 |
| fliP | b1948 | flagellar biosynthesis protein P | chromosome | CDS | 2019893 | 738 | + | 0.531165 |
| fliQ | b1949 | flagellar biosynthesis protein Q | chromosome | CDS | 2020640 | 270 | + | 0.503704 |
| fliR | b1950 | flagellar biosynthesis protein R | chromosome | CDS | 2020917 | 786 | + | 0.474555 |
| fliS | b1925 | flagellar protein FliS | chromosome | CDS | 2003327 | 411 | + | 0.498783 |
| fliT | b1926 | predicted chaperone | chromosome | CDS | 2003737 | 366 | + | 0.516393 |
| fliY | b1920 | cystine transporter subunit | chromosome | CDS | 1997609 | 801 | - | 0.498127 |
| fliZ | b1921 | predicted regulator of FliA activity | chromosome | CDS | 1998497 | 552 | - | 0.46558 |
| flk | b2321 | predicted flagella assembly protein | chromosome | CDS | 2435972 | 996 | + | 0.52008 |
| flu | b2000 | CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter | chromosome | CDS | 2069563 | 3120 | + | 0.582372 |
| flxA | b1566 | Qin prophage; predicted protein | chromosome | CDS | 1644429 | 333 | + | 0.429429 |
| fmt | b3288 | methionyl-tRNA formyltransferase | chromosome | CDS | 3432236 | 948 | + | 0.528481 |
| fnr | b1334 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth | chromosome | CDS | 1396798 | 753 | - | 0.5166 |
| focA | b0904 | formate transporter | chromosome | CDS | 952832 | 858 | - | 0.48951 |
| focB | b2492 | predicted formate transporter | chromosome | CDS | 2611956 | 849 | + | 0.512367 |
| folA | b0048 | dihydrofolate reductase | chromosome | CDS | 49823 | 480 | + | 0.527083 |
| folB | b3058 | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | chromosome | CDS | 3202243 | 369 | - | 0.509485 |
| folC | b2315 | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase | chromosome | CDS | 2429696 | 1269 | - | 0.560284 |
| folD | b0529 | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase | chromosome | CDS | 556098 | 867 | - | 0.543253 |
| folE | b2153 | GTP cyclohydrolase I | chromosome | CDS | 2241006 | 669 | - | 0.512706 |
| folK | b0142 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase | chromosome | CDS | 157253 | 480 | - | 0.5 |
| folM | b1606 | short chain dehydrogenase | chromosome | CDS | 1679000 | 723 | + | 0.50899 |
| folP | b3177 | 7,8-dihydropteroate synthase | chromosome | CDS | 3322085 | 849 | - | 0.515901 |
| folX | b2303 | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase | chromosome | CDS | 2419347 | 363 | + | 0.449036 |
| fpr | b3924 | ferredoxin-NADP reductase | chromosome | CDS | 4111749 | 747 | - | 0.535475 |
| frc | b2374 | formyl-coenzyme A transferase | chromosome | CDS | 2490026 | 1251 | - | 0.470823 |
| frdA | b4154 | fumarate reductase | chromosome | CDS | 4378533 | 1809 | - | 0.563847 |
| frdB | b4153 | fumarate reductase (anaerobic), Fe-S subunit | chromosome | CDS | 4377806 | 735 | - | 0.536054 |
| frdC | b4152 | fumarate reductase subunit C | chromosome | CDS | 4377400 | 396 | - | 0.492424 |
| frdD | b4151 | fumarate reductase subunit D | chromosome | CDS | 4377030 | 360 | - | 0.544444 |
| fre | b3844 | NAD(P)H-flavin reductase | chromosome | CDS | 4024550 | 702 | + | 0.52849 |
| frlA | b3370 | predicted fructoselysine transporter | chromosome | CDS | 3497932 | 1338 | + | 0.546338 |
| frlB | b3371 | fructoselysine-6-P-deglycase | chromosome | CDS | 3499290 | 1023 | + | 0.544477 |
| frlC | b4474 | predicted isomerase | chromosome | CDS | 3500362 | 831 | + | 0.548736 |
| frlD | b3374 | fructoselysine 6-kinase | chromosome | CDS | 3501189 | 786 | + | 0.573791 |
| frlR | b3375 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3502074 | 732 | + | 0.509563 |
| frmA | b0356 | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase | chromosome | CDS | 377686 | 1110 | - | 0.536937 |
| frmB | b0355 | predicted esterase | chromosome | CDS | 376759 | 834 | - | 0.485611 |
| frmR | b0357 | regulator protein that represses frmRAB operon | chromosome | CDS | 378830 | 276 | - | 0.532609 |
| frr | b0172 | ribosome releasing factor | chromosome | CDS | 192872 | 558 | + | 0.508961 |
| frsA | b0239 | fermentation/respiration switch protein | chromosome | CDS | 256527 | 1245 | + | 0.536546 |
| fruA | b2167 | fused fructose-specific PTS enzymes: IIBcomponent/IIC components | chromosome | CDS | 2257741 | 1692 | - | 0.557329 |
| fruB | b2169 | fused fructose-specific PTS enzymes: IIA component/HPr component | chromosome | CDS | 2260387 | 1131 | - | 0.555261 |
| fruK | b2168 | 1-phosphofructokinase | chromosome | CDS | 2259449 | 939 | - | 0.534611 |
| fruR | b0080 | DNA-binding transcriptional dual regulator | chromosome | CDS | 88028 | 1005 | + | 0.549254 |
| frvA | b3900 | predicted enzyme IIA component of PTS | chromosome | CDS | 4090400 | 447 | - | 0.501119 |
| frvB | b3899 | fused predicted PTS enzymes: IIB component/IIC component | chromosome | CDS | 4088938 | 1452 | - | 0.559229 |
| frvR | b3897 | predicted regulator | chromosome | CDS | 4086130 | 1749 | - | 0.500286 |
| frvX | b3898 | predicted endo-1,4-beta-glucanase | chromosome | CDS | 4087878 | 1071 | - | 0.525677 |
| frwB | b3950 | predicted enzyme IIB component of PTS | chromosome | CDS | 4141647 | 321 | + | 0.492212 |
| frwC | b3949 | predicted enzyme IIC component of PTS | chromosome | CDS | 4140553 | 1080 | + | 0.541667 |
| frwD | b3953 | predicted enzyme IIB component of PTS | chromosome | CDS | 4145161 | 342 | + | 0.561404 |
| fsaA | b0825 | fructose-6-phosphate aldolase 1 | chromosome | CDS | 862865 | 663 | + | 0.541478 |
| fsaB | b3946 | fructose-6-phosphate aldolase 2 | chromosome | CDS | 4137069 | 663 | - | 0.533937 |
| fsr | b0479 | predicted fosmidomycin efflux system | chromosome | CDS | 502700 | 1221 | - | 0.524161 |
| ftn | b1905 | ferritin iron storage protein (cytoplasmic) | chromosome | CDS | 1986740 | 498 | + | 0.427711 |
| ftsA | b0094 | cell division protein | chromosome | CDS | 103982 | 1263 | + | 0.520982 |
| ftsB | b2748 | cell divison protein FtsB | chromosome | CDS | 2870531 | 312 | - | 0.519231 |
| ftsE | b3463 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 3600102 | 669 | - | 0.563528 |
| ftsH | b3178 | protease, ATP-dependent zinc-metallo | chromosome | CDS | 3323023 | 1935 | - | 0.535917 |
| ftsI | b0084 | transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) | chromosome | CDS | 91413 | 1767 | + | 0.539898 |
| ftsK | b0890 | DNA-binding membrane protein required for chromosome resolution and partitioning | chromosome | CDS | 932447 | 3990 | + | 0.5401 |
| ftsL | b0083 | membrane bound cell division protein at septum containing leucine zipper motif | chromosome | CDS | 91032 | 366 | + | 0.502732 |
| ftsN | b3933 | essential cell division protein | chromosome | CDS | 4120403 | 960 | - | 0.573958 |
| ftsQ | b0093 | membrane anchored protein involved in growth of wall at septum | chromosome | CDS | 103155 | 831 | + | 0.533093 |
| ftsW | b0089 | integral membrane protein involved in stabilizing FstZ ring during cell division | chromosome | CDS | 98403 | 1245 | + | 0.53012 |
| ftsX | b3462 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 3599051 | 1059 | - | 0.530689 |
| ftsY | b3464 | fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein | chromosome | CDS | 3600773 | 1494 | - | 0.534806 |
| ftsZ | b0095 | cell division protein FtsZ | chromosome | CDS | 105305 | 1152 | + | 0.541667 |
| fucA | b2800 | L-fuculose phosphate aldolase | chromosome | CDS | 2931063 | 648 | - | 0.490741 |
| fucI | b2802 | L-fucose isomerase | chromosome | CDS | 2933606 | 1776 | + | 0.545045 |
| fucK | b2803 | L-fuculokinase | chromosome | CDS | 2935460 | 1449 | + | 0.509317 |
| fucO | b2799 | L-1,2-propanediol oxidoreductase | chromosome | CDS | 2929887 | 1152 | - | 0.534722 |
| fucP | b2801 | L-fucose transporter | chromosome | CDS | 2932257 | 1317 | + | 0.476841 |
| fucR | b2805 | DNA-binding transcriptional activator | chromosome | CDS | 2937390 | 732 | + | 0.48224 |
| fucU | b2804 | L-fucose mutarotase | chromosome | CDS | 2936910 | 423 | + | 0.489362 |
| fumA | b1612 | fumarate hydratase (fumarase A), aerobic Class I | chromosome | CDS | 1684755 | 1647 | - | 0.515483 |
| fumB | b4122 | anaerobic class I fumarate hydratase (fumarase B) | chromosome | CDS | 4343703 | 1647 | - | 0.546448 |
| fumC | b1611 | fumarate hydratase | chromosome | CDS | 1683209 | 1404 | - | 0.537749 |
| fur | b0683 | ferric uptake regulator | chromosome | CDS | 709423 | 447 | - | 0.478747 |
| fusA | b3340 | elongation factor EF-2 | chromosome | CDS | 3469422 | 2115 | - | 0.508274 |
| fxsA | b4140 | inner membrane protein | chromosome | CDS | 4366687 | 477 | + | 0.473795 |
| gabD | b2661 | succinate-semialdehyde dehydrogenase I, NADP-dependent | chromosome | CDS | 2789295 | 1449 | + | 0.583161 |
| gabP | b2663 | gamma-aminobutyrate transporter | chromosome | CDS | 2792275 | 1401 | + | 0.513205 |
| gabT | b2662 | 4-aminobutyrate aminotransferase | chromosome | CDS | 2790757 | 1281 | + | 0.593287 |
| gadA | b3517 | glutamate decarboxylase A, PLP-dependent | chromosome | CDS | 3664203 | 1401 | - | 0.539615 |
| gadB | b1493 | glutamate decarboxylase B, PLP-dependent | chromosome | CDS | 1568669 | 1401 | - | 0.533191 |
| gadC | b1492 | predicted glutamate:gamma-aminobutyric acid antiporter | chromosome | CDS | 1566978 | 1536 | - | 0.48112 |
| gadE | b3512 | DNA-binding transcriptional activator | chromosome | CDS | 3656389 | 528 | + | 0.329545 |
| gadW | b3515 | DNA-binding transcriptional activator | chromosome | CDS | 3661913 | 729 | - | 0.418381 |
| gadX | b3516 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3663009 | 825 | - | 0.409697 |
| gadY | b4452 | unknown RNA | chromosome | misc_RNA | 3662887 | 105 | + | 0.495238 |
| galE | b0759 | UDP-galactose-4-epimerase | chromosome | CDS | 790262 | 1017 | - | 0.543756 |
| galF | b2042 | predicted subunit with GalU | chromosome | CDS | 2111458 | 894 | - | 0.516779 |
| galK | b0757 | galactokinase | chromosome | CDS | 788054 | 1149 | - | 0.529156 |
| galM | b0756 | galactose-1-epimerase (mutarotase) | chromosome | CDS | 787020 | 1041 | - | 0.556196 |
| galP | b2943 | D-galactose transporter | chromosome | CDS | 3086306 | 1395 | + | 0.531183 |
| galR | b2837 | DNA-binding transcriptional repressor | chromosome | CDS | 2974621 | 1032 | + | 0.527132 |
| galS | b2151 | DNA-binding transcriptional repressor | chromosome | CDS | 2238650 | 1041 | - | 0.524496 |
| galT | b0758 | galactose-1-phosphate uridylyltransferase | chromosome | CDS | 789206 | 1047 | - | 0.557784 |
| galU | b1236 | glucose-1-phosphate uridylyltransferase | chromosome | CDS | 1290680 | 909 | + | 0.469747 |
| gapA | b1779 | glyceraldehyde-3-phosphate dehydrogenase | chromosome | CDS | 1860795 | 996 | + | 0.5 |
| gapC | b4493 | chromosome | pseudo | 1487737 | 1001 | - | 0.480519 | |
| gapC | b4493 | chromosome | pseudo | 1487737 | 1001 | - | 0.480519 | |
| gapC_1 | b1417 | chromosome | pseudo | 1487985 | 753 | - | 0.487384 | |
| gapC_2 | b1416 | chromosome | pseudo | 1487737 | 252 | - | 0.460317 | |
| garD | b3128 | (D)-galactarate dehydrogenase | chromosome | CDS | 3273304 | 1572 | + | 0.528626 |
| garK | b3124 | glycerate kinase I | chromosome | CDS | 3268647 | 1227 | - | 0.538712 |
| garL | b3126 | alpha-dehydro-beta-deoxy-D-glucarate aldolase | chromosome | CDS | 3270809 | 771 | - | 0.529183 |
| garP | b3127 | predicted (D)-galactarate transporter | chromosome | CDS | 3271595 | 1335 | - | 0.513109 |
| garR | b3125 | tartronate semialdehyde reductase | chromosome | CDS | 3269889 | 891 | - | 0.52862 |
| gatA | b2094 | galactitol-specific enzyme IIA component of PTS | chromosome | CDS | 2172619 | 453 | - | 0.426049 |
| gatB | b2093 | galactitol-specific enzyme IIB component of PTS | chromosome | CDS | 2172304 | 285 | - | 0.417544 |
| gatC | b2092 | galactitol-specific enzyme IIC component of PTS | chromosome | CDS | 2170945 | 1356 | - | 0.511799 |
| gatD | b2091 | galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 2169857 | 1041 | - | 0.487992 |
| gatR | b4498 | chromosome | pseudo | 2167717 | 2041 | - | 0.508574 | |
| gatR | b4498 | chromosome | pseudo | 2167717 | 2041 | - | 0.508574 | |
| gatR_1 | b2087 | chromosome | pseudo | 2167717 | 447 | - | 0.438479 | |
| gatR_2 | b2090 | chromosome | pseudo | 2169419 | 339 | - | 0.495575 | |
| gatY | b2096 | D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit | chromosome | CDS | 2174372 | 855 | - | 0.530994 |
| gatZ | b2095 | D-tagatose 1,6-bisphosphate aldolase 2, subunit | chromosome | CDS | 2173081 | 1263 | - | 0.489311 |
| gcd | b0124 | glucose dehydrogenase | chromosome | CDS | 138835 | 2391 | - | 0.554161 |
| gcl | b0507 | glyoxylate carboligase | chromosome | CDS | 533140 | 1782 | + | 0.529181 |
| gcvA | b2808 | DNA-binding transcriptional dual regulator | chromosome | CDS | 2939672 | 918 | - | 0.491285 |
| gcvB | b4443 | regulatory sRNA | chromosome | misc_RNA | 2940718 | 205 | + | 0.429268 |
| gcvH | b2904 | glycine cleavage system protein H | chromosome | CDS | 3047182 | 390 | - | 0.525641 |
| gcvP | b2903 | glycine dehydrogenase | chromosome | CDS | 3044190 | 2874 | - | 0.559499 |
| gcvR | b2479 | DNA-binding transcriptional repressor, regulatory protein accessory to GcvA | chromosome | CDS | 2597928 | 573 | + | 0.500873 |
| gcvT | b2905 | glycine cleavage system aminomethyltransferase T | chromosome | CDS | 3047595 | 1095 | - | 0.546119 |
| gdhA | b1761 | glutamate dehydrogenase | chromosome | CDS | 1840395 | 1344 | + | 0.532738 |
| geneA | b0175 | CDP-diglyceride synthase | chromosome | CDS | 195677 | 858 | + | 0.508159 |
| ggt | b3447 | gamma-glutamyltranspeptidase periplasmic precursor | chromosome | CDS | 3583104 | 1743 | - | 0.550201 |
| gidA | b3741 | glucose-inhibited division protein A | chromosome | CDS | 3921767 | 1890 | - | 0.543915 |
| gidB | b3740 | glucose-inhibited division protein B | chromosome | CDS | 3921080 | 624 | - | 0.487179 |
| glcB | b2976 | malate synthase | chromosome | CDS | 3119656 | 2172 | - | 0.53453 |
| glcC | b2980 | DNA-binding transcriptional dual regulator, glycolate-binding | chromosome | CDS | 3126294 | 765 | + | 0.550327 |
| glcD | b2979 | glycolate oxidase subunit, FAD-linked | chromosome | CDS | 3124544 | 1500 | - | 0.566667 |
| glcE | b4468 | glycolate oxidase FAD binding subunit | chromosome | CDS | 3123492 | 1053 | - | 0.575499 |
| glcF | b4467 | glycolate oxidase iron-sulfur subunit | chromosome | CDS | 3122258 | 1224 | - | 0.555556 |
| glcG | b2977 | hypothetical protein | chromosome | CDS | 3121849 | 405 | - | 0.545679 |
| gldA | b3945 | glycerol dehydrogenase | chromosome | CDS | 4135955 | 1104 | - | 0.547101 |
| glf | b2036 | UDP-galactopyranose mutase, FAD/NAD(P)-binding | chromosome | CDS | 2105250 | 1104 | - | 0.355978 |
| glgA | b3429 | glycogen synthase | chromosome | CDS | 3564623 | 1434 | - | 0.549512 |
| glgB | b3432 | glycogen branching enzyme | chromosome | CDS | 3569339 | 2187 | - | 0.532693 |
| glgC | b3430 | glucose-1-phosphate adenylyltransferase | chromosome | CDS | 3566056 | 1296 | - | 0.526235 |
| glgP | b3428 | glycogen phosphorylase | chromosome | CDS | 3562157 | 2448 | - | 0.509804 |
| glgS | b3049 | glycogen synthesis protein GlgS | chromosome | CDS | 3189761 | 201 | - | 0.452736 |
| glgX | b3431 | glycogen debranching enzyme | chromosome | CDS | 3567369 | 1974 | - | 0.543566 |
| glk | b2388 | glucokinase | chromosome | CDS | 2506483 | 966 | - | 0.515528 |
| glmM | b3176 | phosphoglucosamine mutase | chromosome | CDS | 3320755 | 1338 | - | 0.544096 |
| glmS | b3729 | D-fructose-6-phosphate amidotransferase | chromosome | CDS | 3909862 | 1830 | - | 0.535519 |
| glmU | b3730 | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | chromosome | CDS | 3911853 | 1371 | - | 0.526623 |
| glnA | b3870 | glutamine synthetase | chromosome | CDS | 4054648 | 1410 | - | 0.529078 |
| glnB | b2553 | regulatory protein P-II for glutamine synthetase | chromosome | CDS | 2685092 | 339 | - | 0.510324 |
| glnD | b0167 | PII uridylyl-transferase | chromosome | CDS | 185978 | 2673 | - | 0.539469 |
| glnE | b3053 | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase | chromosome | CDS | 3194823 | 2841 | - | 0.559662 |
| glnG | b3868 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | chromosome | CDS | 4051892 | 1410 | - | 0.569504 |
| glnH | b0811 | glutamine ABC transporter periplasmic protein | chromosome | CDS | 846481 | 747 | - | 0.487282 |
| glnK | b0450 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB | chromosome | CDS | 471822 | 339 | + | 0.507375 |
| glnL | b3869 | sensory histidine kinase in two-component regulatory system with GlnG | chromosome | CDS | 4053313 | 1050 | - | 0.552381 |
| glnP | b0810 | glutamine ABC transporter permease protein | chromosome | CDS | 845683 | 660 | - | 0.534849 |
| glnQ | b0809 | glutamine ABC transporter ATP-binding protein | chromosome | CDS | 844964 | 723 | - | 0.539419 |
| glnS | b0680 | glutaminyl-tRNA synthetase | chromosome | CDS | 705316 | 1665 | + | 0.524925 |
| glnU | b0670 | tRNA-Gln | chromosome | tRNA | 696088 | 75 | - | 0.573333 |
| glnV | b0665 | tRNA-Gln | chromosome | tRNA | 695765 | 75 | - | 0.586667 |
| glnW | b0668 | tRNA-Gln | chromosome | tRNA | 695979 | 75 | - | 0.573333 |
| glnX | b0664 | tRNA-Gln | chromosome | tRNA | 695653 | 75 | - | 0.586667 |
| gloA | b1651 | glyoxalase I, Ni-dependent | chromosome | CDS | 1725861 | 408 | + | 0.514706 |
| gloB | b0212 | predicted hydroxyacylglutathione hydrolase | chromosome | CDS | 234027 | 756 | - | 0.402116 |
| glpA | b2241 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding | chromosome | CDS | 2350669 | 1629 | + | 0.573358 |
| glpB | b2242 | anaerobic glycerol-3-phosphate dehydrogenase subunit B | chromosome | CDS | 2352287 | 1260 | + | 0.55873 |
| glpC | b2243 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit | chromosome | CDS | 2353543 | 1191 | + | 0.539882 |
| glpD | b3426 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding | chromosome | CDS | 3560036 | 1506 | + | 0.550465 |
| glpE | b3425 | thiosulfate sulfurtransferase | chromosome | CDS | 3559520 | 327 | - | 0.535168 |
| glpF | b3927 | glycerol facilitator | chromosome | CDS | 4115268 | 846 | - | 0.509456 |
| glpG | b3424 | predicted intramembrane serine protease | chromosome | CDS | 3558645 | 831 | - | 0.541516 |
| glpK | b3926 | glycerol kinase | chromosome | CDS | 4113737 | 1509 | - | 0.540755 |
| glpQ | b2239 | periplasmic glycerophosphodiester phosphodiesterase | chromosome | CDS | 2347957 | 1077 | - | 0.455896 |
| glpR | b3423 | DNA-binding transcriptional repressor | chromosome | CDS | 3557870 | 759 | - | 0.546772 |
| glpT | b2240 | sn-glycerol-3-phosphate transporter | chromosome | CDS | 2349038 | 1359 | - | 0.526122 |
| glpX | b3925 | fructose 1,6-bisphosphatase II | chromosome | CDS | 4112592 | 1011 | - | 0.567755 |
| gltA | b0720 | citrate synthase | chromosome | CDS | 752408 | 1284 | - | 0.507009 |
| gltB | b3212 | glutamate synthase, large subunit | chromosome | CDS | 3352654 | 4554 | + | 0.570487 |
| gltD | b3213 | glutamate synthase, 4Fe-4S protein, small subunit | chromosome | CDS | 3357220 | 1419 | + | 0.561663 |
| gltF | b3214 | periplasmic protein | chromosome | CDS | 3359198 | 765 | + | 0.453595 |
| gltI | b0655 | glutamate and aspartate transporter subunit | chromosome | CDS | 686062 | 909 | - | 0.487349 |
| gltJ | b0654 | glutamate and aspartate transporter subunit | chromosome | CDS | 685152 | 741 | - | 0.524966 |
| gltK | b0653 | glutamate and aspartate transporter subunit | chromosome | CDS | 684478 | 675 | - | 0.502222 |
| gltL | b0652 | glutamate and aspartate transporter subunit | chromosome | CDS | 683753 | 726 | - | 0.523416 |
| gltP | b4077 | glutamate/aspartate:proton symporter | chromosome | CDS | 4292504 | 1314 | + | 0.532724 |
| gltS | b3653 | glutamate transporter | chromosome | CDS | 3825483 | 1206 | - | 0.536484 |
| gltT | b3969 | tRNA-Glu | chromosome | tRNA | 4166395 | 76 | + | 0.644737 |
| gltU | b3757 | tRNA-Glu | chromosome | tRNA | 3941458 | 76 | + | 0.644737 |
| gltV | b4008 | tRNA-Glu | chromosome | tRNA | 4207797 | 76 | + | 0.644737 |
| gltW | b2590 | tRNA-Glu | chromosome | tRNA | 2727391 | 76 | - | 0.644737 |
| gltX | b2400 | glutamyl-tRNA synthetase | chromosome | CDS | 2517279 | 1416 | - | 0.525424 |
| glvB | b3682 | arbutin specific enzyme IIB component of PTS | chromosome | CDS | 3860010 | 486 | - | 0.506173 |
| glvC | b3683 | arbutin specific enzyme IIC component of PTS | chromosome | CDS | 3860520 | 1107 | - | 0.528455 |
| glvG | b3681 | predicted 6-phospho-beta-glucosidase (pseudogene) | chromosome | CDS | 3859372 | 639 | - | 0.532081 |
| glxK | b0514 | glycerate kinase II | chromosome | CDS | 541112 | 1146 | + | 0.555846 |
| glxR | b0509 | tartronate semialdehyde reductase, NADH-dependent | chromosome | CDS | 535810 | 879 | + | 0.507395 |
| glyA | b2551 | serine hydroxymethyltransferase | chromosome | CDS | 2682276 | 1254 | - | 0.533493 |
| glyQ | b3560 | glycyl-tRNA synthetase subunit alpha | chromosome | CDS | 3722430 | 912 | - | 0.561404 |
| glyS | b3559 | glycyl-tRNA synthetase subunit beta | chromosome | CDS | 3720351 | 2070 | - | 0.554106 |
| glyT | b3978 | tRNA-Gly | chromosome | tRNA | 4173696 | 75 | + | 0.573333 |
| glyU | b2864 | tRNA-Gly | chromosome | tRNA | 2997006 | 74 | - | 0.567568 |
| glyV | b4163 | tRNA-Gly | chromosome | tRNA | 4390383 | 76 | + | 0.605263 |
| glyW | b1911 | tRNA-Gly | chromosome | tRNA | 1990066 | 76 | - | 0.605263 |
| glyX | b4164 | tRNA-Gly | chromosome | tRNA | 4390495 | 76 | + | 0.605263 |
| glyY | b4165 | tRNA-Gly | chromosome | tRNA | 4390606 | 76 | + | 0.605263 |
| gmd | b2053 | GDP-D-mannose dehydratase, NAD(P)-binding | chromosome | CDS | 2125217 | 1122 | - | 0.548128 |
| gmhB | b0200 | hypothetical protein | chromosome | CDS | 222833 | 576 | + | 0.501736 |
| gmk | b3648 | guanylate kinase | chromosome | CDS | 3819451 | 624 | + | 0.490385 |
| gmr | b1285 | modulator of Rnase II stability | chromosome | CDS | 1342781 | 1986 | - | 0.484894 |
| gnd | b2029 | 6-phosphogluconate dehydrogenase | chromosome | CDS | 2097886 | 1407 | - | 0.501777 |
| gnsA | b4517 | predicted regulator of phosphatidylethanolamine synthesis | chromosome | CDS | 1051290 | 174 | + | 0.396552 |
| gnsB | b1550 | Qin prophage; predicted protein | chromosome | CDS | 1635633 | 174 | - | 0.298851 |
| gntK | b3437 | gluconate kinase 2 | chromosome | CDS | 3575088 | 528 | - | 0.496212 |
| gntP | b4321 | fructuronate transporter | chromosome | CDS | 4547976 | 1344 | - | 0.530506 |
| gntR | b3438 | DNA-binding transcriptional repressor | chromosome | CDS | 3575754 | 996 | - | 0.544177 |
| gntT | b3415 | gluconate transporter, high-affinity GNT I system | chromosome | CDS | 3544581 | 1317 | + | 0.533789 |
| gntU | b4476 | gluconate transporter, low affinity GNT 1 system | chromosome | CDS | 3573744 | 1341 | - | 0.550336 |
| gntX | b3413 | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system | chromosome | CDS | 3542904 | 684 | + | 0.559942 |
| gntY | b3414 | predicted gluconate transport associated protein | chromosome | CDS | 3543646 | 576 | + | 0.532986 |
| gor | b3500 | glutathione reductase | chromosome | CDS | 3644322 | 1353 | + | 0.538064 |
| gph | b3385 | phosphoglycolate phosphatase | chromosome | CDS | 3511653 | 759 | - | 0.528327 |
| gpmA | b0755 | phosphoglyceromutase | chromosome | CDS | 786066 | 753 | - | 0.50996 |
| gpmI | b3612 | phosphoglyceromutase | chromosome | CDS | 3783283 | 1545 | + | 0.534628 |
| gpp | b3779 | guanosine pentaphosphatase/exopolyphosphatase | chromosome | CDS | 3960768 | 1485 | - | 0.5367 |
| gpsA | b3608 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | chromosome | CDS | 3780665 | 1020 | - | 0.567647 |
| gpt | b0238 | xanthine phosphoribosyltransferase | chromosome | CDS | 255977 | 459 | + | 0.518519 |
| greA | b3181 | transcription elongation factor GreA | chromosome | CDS | 3326261 | 477 | - | 0.484277 |
| greB | b3406 | transcription elongation factor GreB | chromosome | CDS | 3534834 | 477 | + | 0.498952 |
| groL | b4143 | chaperonin GroEL | chromosome | CDS | 4369048 | 1647 | + | 0.52884 |
| groS | b4142 | co-chaperonin GroES | chromosome | CDS | 4368711 | 294 | + | 0.486395 |
| grpE | b2614 | heat shock protein | chromosome | CDS | 2748137 | 594 | - | 0.503367 |
| grxA | b0849 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) | chromosome | CDS | 889719 | 258 | - | 0.449612 |
| grxB | b1064 | glutaredoxin 2 (Grx2) | chromosome | CDS | 1122630 | 648 | - | 0.490741 |
| grxC | b3610 | glutaredoxin 3 | chromosome | CDS | 3782214 | 252 | - | 0.52381 |
| gshA | b2688 | glutamate--cysteine ligase | chromosome | CDS | 2812905 | 1557 | - | 0.513166 |
| gshB | b2947 | glutathione synthetase | chromosome | CDS | 3089900 | 951 | + | 0.534175 |
| gsk | b0477 | inosine/guanosine kinase | chromosome | CDS | 499349 | 1305 | + | 0.518774 |
| gspA | b3323 | general secretory pathway component, cryptic | chromosome | CDS | 3451951 | 1470 | - | 0.489796 |
| gspC | b3324 | general secretory pathway component, cryptic | chromosome | CDS | 3453600 | 816 | + | 0.42402 |
| gspD | b3325 | general secretory pathway component, cryptic | chromosome | CDS | 3454399 | 1953 | + | 0.501792 |
| gspE | b3326 | general secretory pathway component, cryptic | chromosome | CDS | 3456361 | 1482 | + | 0.524966 |
| gspF | b3327 | general secretory pathway component, cryptic | chromosome | CDS | 3457839 | 1197 | + | 0.510443 |
| gspG | b3328 | pseudopilin, cryptic, general secretion pathway | chromosome | CDS | 3459045 | 438 | + | 0.486301 |
| gspH | b3329 | predicted general secretory pathway component, cryptic | chromosome | CDS | 3459490 | 510 | + | 0.560784 |
| gspI | b3330 | general secretory pathway component, cryptic | chromosome | CDS | 3459996 | 378 | + | 0.478836 |
| gspJ | b3331 | predicted general secretory pathway component, cryptic | chromosome | CDS | 3460366 | 588 | + | 0.503401 |
| gspK | b3332 | general secretory pathway component, cryptic | chromosome | CDS | 3460946 | 984 | + | 0.502033 |
| gspL | b3333 | general secretory pathway component, cryptic | chromosome | CDS | 3461944 | 1164 | + | 0.486254 |
| gspM | b3334 | general secretory pathway component, cryptic | chromosome | CDS | 3463104 | 462 | + | 0.478355 |
| gspO | b3335 | bifunctional prepilin leader peptidase/ methylase | chromosome | CDS | 3463565 | 678 | + | 0.504425 |
| gss | b2988 | fused glutathionylspermidine amidase/glutathionylspermidine synthetase | chromosome | CDS | 3134685 | 1860 | - | 0.524731 |
| gst | b1635 | glutathionine S-transferase | chromosome | CDS | 1712401 | 606 | + | 0.504951 |
| guaA | b2507 | bifunctional GMP synthase/glutamine amidotransferase protein | chromosome | CDS | 2628980 | 1578 | - | 0.541191 |
| guaB | b2508 | inositol-5-monophosphate dehydrogenase | chromosome | CDS | 2630626 | 1467 | - | 0.546694 |
| guaC | b0104 | guanosine 5'-monophosphate oxidoreductase | chromosome | CDS | 113444 | 1044 | + | 0.51341 |
| guaD | b2883 | guanine deaminase | chromosome | CDS | 3023788 | 1320 | + | 0.489394 |
| gudD | b2787 | (D)-glucarate dehydratase 1 | chromosome | CDS | 2916067 | 1341 | - | 0.532438 |
| gudP | b2789 | predicted D-glucarate transporter | chromosome | CDS | 2918770 | 1353 | - | 0.522542 |
| gudX | b2788 | predicted glucarate dehydratase | chromosome | CDS | 2917428 | 1341 | - | 0.539896 |
| gutM | b2706 | DNA-binding transcriptional activator of glucitol operon | chromosome | CDS | 2826643 | 360 | + | 0.55 |
| gutQ | b2708 | predicted phosphosugar-binding protein | chromosome | CDS | 2827835 | 966 | + | 0.573499 |
| gyrA | b2231 | DNA gyrase subunit A | chromosome | CDS | 2334815 | 2628 | - | 0.539954 |
| gyrB | b3699 | DNA gyrase subunit B | chromosome | CDS | 3875728 | 2415 | - | 0.549896 |
| hcaB | b2541 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2669247 | 813 | + | 0.560886 |
| hcaC | b2540 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit | chromosome | CDS | 2668930 | 321 | + | 0.554517 |
| hcaD | b2542 | phenylpropionate dioxygenase, ferredoxin reductase subunit | chromosome | CDS | 2670069 | 1203 | + | 0.540316 |
| hcaE | b2538 | 3-phenylpropionate dioxygenase, large (alpha) subunit | chromosome | CDS | 2667054 | 1362 | + | 0.529369 |
| hcaF | b2539 | 3-phenylpropionate dioxygenase, small (beta) subunit | chromosome | CDS | 2668412 | 519 | + | 0.522158 |
| hcaR | b2537 | DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism | chromosome | CDS | 2666028 | 891 | - | 0.498316 |
| hcaT | b2536 | predicted 3-phenylpropionic transporter | chromosome | CDS | 2664729 | 1140 | - | 0.564912 |
| hchA | b1967 | chaperone protein HchA | chromosome | CDS | 2033859 | 852 | + | 0.485915 |
| hcp | b0873 | hydroxylamine reductase | chromosome | CDS | 911385 | 1653 | - | 0.547489 |
| hcr | b0872 | HCP oxidoreductase, NADH-dependent | chromosome | CDS | 910405 | 969 | - | 0.55418 |
| hda | b2496 | DNA replication initiation factor | chromosome | CDS | 2616097 | 747 | - | 0.531459 |
| hdeA | b3510 | stress response protein acid-resistance protein | chromosome | CDS | 3654431 | 333 | - | 0.429429 |
| hdeB | b3509 | acid-resistance protein | chromosome | CDS | 3653989 | 327 | - | 0.400612 |
| hdeD | b3511 | acid-resistance membrane protein | chromosome | CDS | 3655018 | 573 | + | 0.465969 |
| hdfR | b4480 | transcriptional regulator HdfR | chromosome | CDS | 3945151 | 840 | - | 0.484524 |
| hdhA | b1619 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1695297 | 768 | - | 0.472656 |
| helD | b0962 | DNA helicase IV | chromosome | CDS | 1023694 | 2055 | + | 0.530414 |
| hemA | b1210 | glutamyl-tRNA reductase | chromosome | CDS | 1262937 | 1257 | + | 0.543357 |
| hemB | b0369 | delta-aminolevulinic acid dehydratase | chromosome | CDS | 387977 | 975 | - | 0.539487 |
| hemC | b3805 | porphobilinogen deaminase | chromosome | CDS | 3987848 | 942 | - | 0.561571 |
| hemD | b3804 | uroporphyrinogen-III synthetase | chromosome | CDS | 3987111 | 741 | - | 0.529015 |
| hemE | b3997 | uroporphyrinogen decarboxylase | chromosome | CDS | 4195739 | 1065 | + | 0.560563 |
| hemF | b2436 | coproporphyrinogen III oxidase | chromosome | CDS | 2551247 | 900 | + | 0.546667 |
| hemG | b3850 | protoporphyrin oxidase, flavoprotein | chromosome | CDS | 4032631 | 546 | + | 0.518315 |
| hemH | b0475 | ferrochelatase | chromosome | CDS | 497279 | 963 | + | 0.538941 |
| hemL | b0154 | glutamate-1-semialdehyde aminotransferase | chromosome | CDS | 173602 | 1281 | - | 0.555035 |
| hemN | b3867 | coproporphyrinogen III oxidase | chromosome | CDS | 4050068 | 1374 | + | 0.531295 |
| hemX | b3803 | predicted uroporphyrinogen III methylase | chromosome | CDS | 3985908 | 1182 | - | 0.533841 |
| hemY | b3802 | predicted protoheme IX synthesis protein | chromosome | CDS | 3984709 | 1197 | - | 0.549708 |
| hepA | b0059 | ATP-dependent helicase HepA | chromosome | CDS | 60358 | 2907 | - | 0.54902 |
| hflC | b4175 | modulator for HflB protease specific for phage lambda cII repressor | chromosome | CDS | 4401323 | 1005 | + | 0.530348 |
| hflD | b1132 | hypothetical protein | chromosome | CDS | 1191213 | 642 | - | 0.571651 |
| hflK | b4174 | modulator for HflB protease specific for phage lambda cII repressor | chromosome | CDS | 4400061 | 1260 | + | 0.561905 |
| hflX | b4173 | predicted GTPase | chromosome | CDS | 4398695 | 1281 | + | 0.538642 |
| hfq | b4172 | RNA-binding protein Hfq | chromosome | CDS | 4398311 | 309 | + | 0.488673 |
| hha | b0460 | modulator of gene expression, with H-NS | chromosome | CDS | 479314 | 219 | - | 0.406393 |
| hinT | b1103 | purine nucleoside phosphoramidase | chromosome | CDS | 1161108 | 360 | + | 0.505556 |
| hipA | b1507 | regulator with hipB | chromosome | CDS | 1588878 | 1323 | - | 0.480726 |
| hipB | b1508 | DNA-binding transcriptional regulator | chromosome | CDS | 1590200 | 267 | - | 0.445693 |
| hisA | b2024 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | chromosome | CDS | 2093149 | 738 | + | 0.571816 |
| hisB | b2022 | imidazole glycerol-phosphate dehydratase/histidinol phosphatase | chromosome | CDS | 2091492 | 1068 | + | 0.533708 |
| hisC | b2021 | histidinol-phosphate aminotransferase | chromosome | CDS | 2090422 | 1071 | + | 0.553688 |
| hisD | b2020 | histidinol dehydrogenase | chromosome | CDS | 2089121 | 1305 | + | 0.580843 |
| hisF | b2025 | imidazole glycerol phosphate synthase subunit HisF | chromosome | CDS | 2093868 | 777 | + | 0.518661 |
| hisG | b2019 | ATP phosphoribosyltransferase | chromosome | CDS | 2088216 | 900 | + | 0.541111 |
| hisH | b2023 | imidazole glycerol phosphate synthase subunit HisH | chromosome | CDS | 2092559 | 591 | + | 0.566836 |
| hisI | b2026 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein | chromosome | CDS | 2094638 | 612 | + | 0.545752 |
| hisJ | b2309 | histidine/lysine/arginine/ornithine transporter subunit | chromosome | CDS | 2424028 | 783 | - | 0.487867 |
| hisL | b2018 | his operon leader peptide | chromosome | CDS | 2088020 | 51 | + | 0.431373 |
| hisM | b2307 | histidine/lysine/arginine/ornithine transporter subunit | chromosome | CDS | 2422539 | 717 | - | 0.496513 |
| hisP | b2306 | histidine/lysine/arginine/ornithine transporter subunit | chromosome | CDS | 2421758 | 774 | - | 0.51938 |
| hisQ | b2308 | histidine/lysine/arginine/ornithine transporter subunit | chromosome | CDS | 2423252 | 687 | - | 0.525473 |
| hisR | b3797 | tRNA-His | chromosome | tRNA | 3980532 | 77 | + | 0.532468 |
| hisS | b2514 | histidyl-tRNA synthetase | chromosome | CDS | 2637323 | 1275 | - | 0.547451 |
| hlpA | b0178 | periplasmic chaperone | chromosome | CDS | 200482 | 486 | + | 0.502058 |
| hlyE | b1182 | hemolysin E | chromosome | CDS | 1228706 | 912 | - | 0.411184 |
| hmp | b2552 | fused nitric oxide dioxygenase/dihydropteridine reductase 2 | chromosome | CDS | 2683857 | 1191 | + | 0.524769 |
| hns | b1237 | global DNA-binding transcriptional dual regulator H-NS | chromosome | CDS | 1291732 | 414 | - | 0.466184 |
| hofB | b0107 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 115714 | 1386 | - | 0.534632 |
| hofC | b0106 | assembly protein in type IV pilin biogenesis, transmembrane protein | chromosome | CDS | 114522 | 1203 | - | 0.519534 |
| hofQ | b3391 | predicted fimbrial transporter | chromosome | CDS | 3517487 | 1239 | - | 0.544794 |
| hokA | b4455 | toxic polypeptide, small | chromosome | CDS | 3718471 | 153 | - | 0.352941 |
| hokB | b4428 | toxic polypeptide, small | chromosome | CDS | 1489946 | 150 | - | 0.533333 |
| hokC | b4412 | toxic membrane protein, small | chromosome | CDS | 16751 | 153 | - | 0.529412 |
| hokD | b1562 | Qin prophage; small toxic polypeptide | chromosome | CDS | 1643143 | 156 | - | 0.519231 |
| hokE | b4415 | toxic polypeptide, small | chromosome | CDS | 607059 | 153 | + | 0.477124 |
| holA | b0640 | DNA polymerase III subunit delta | chromosome | CDS | 669797 | 1032 | - | 0.523256 |
| holB | b1099 | DNA polymerase III subunit delta' | chromosome | CDS | 1154985 | 1005 | + | 0.540299 |
| holC | b4259 | DNA polymerase III subunit chi | chromosome | CDS | 4481860 | 444 | - | 0.540541 |
| holD | b4372 | DNA polymerase III subunit psi | chromosome | CDS | 4605826 | 414 | + | 0.577295 |
| holE | b1842 | DNA polymerase III, theta subunit | chromosome | CDS | 1923132 | 231 | + | 0.484848 |
| hpt | b0125 | hypoxanthine-guanine phosphoribosyltransferase | chromosome | CDS | 141431 | 537 | + | 0.506518 |
| hrpA | b1413 | ATP-dependent helicase | chromosome | CDS | 1481142 | 3846 | + | 0.535101 |
| hrpB | b0148 | predicted ATP-dependent helicase | chromosome | CDS | 162105 | 2430 | + | 0.565844 |
| hscA | b2526 | chaperone protein HscA | chromosome | CDS | 2655107 | 1851 | - | 0.576985 |
| hscB | b2527 | co-chaperone HscB | chromosome | CDS | 2656974 | 516 | - | 0.523256 |
| hscC | b0650 | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription | chromosome | CDS | 680946 | 1671 | - | 0.500299 |
| hsdM | b4349 | DNA methylase M | chromosome | CDS | 4579482 | 1590 | - | 0.548428 |
| hsdR | b4350 | endonuclease R | chromosome | CDS | 4581272 | 3567 | - | 0.537146 |
| hsdS | b4348 | specificity determinant for hsdM and hsdR | chromosome | CDS | 4578091 | 1395 | - | 0.404301 |
| hslJ | b1379 | heat-inducible protein | chromosome | CDS | 1439345 | 423 | - | 0.468085 |
| hslO | b3401 | Hsp33-like chaperonin | chromosome | CDS | 3527796 | 879 | + | 0.52901 |
| hslR | b3400 | ribosome-associated heat shock protein Hsp15 | chromosome | CDS | 3527370 | 402 | + | 0.534826 |
| hslU | b3931 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 4118439 | 1332 | - | 0.526276 |
| hslV | b3932 | ATP-dependent protease peptidase subunit | chromosome | CDS | 4119780 | 531 | - | 0.527307 |
| hsrA | b3754 | predicted multidrug or homocysteine efflux system | chromosome | CDS | 3937208 | 1428 | - | 0.490896 |
| htgA | b0012 | hypothetical protein | chromosome | CDS | 10830 | 486 | + | 0.481481 |
| htpG | b0473 | heat shock protein 90 | chromosome | CDS | 494344 | 1875 | + | 0.528533 |
| htpX | b1829 | heat shock protein HtpX | chromosome | CDS | 1909719 | 882 | - | 0.535147 |
| htrC | b3989 | heat shock protein | chromosome | CDS | 4187809 | 540 | + | 0.424074 |
| htrE | b0139 | predicted outer membrane usher protein | chromosome | CDS | 152829 | 2598 | - | 0.43341 |
| htrG | b3055 | predicted signal transduction protein (SH3 domain) | chromosome | CDS | 3199229 | 621 | + | 0.52657 |
| htrL | b3618 | hypothetical protein | chromosome | CDS | 3790849 | 858 | - | 0.370629 |
| hupA | b4000 | HU, DNA-binding transcriptional regulator, alpha subunit | chromosome | CDS | 4198304 | 273 | + | 0.483516 |
| hupB | b0440 | HU, DNA-binding transcriptional regulator, beta subunit | chromosome | CDS | 460675 | 273 | + | 0.490842 |
| hyaA | b0972 | hydrogenase 1, small subunit | chromosome | CDS | 1031362 | 1119 | + | 0.561215 |
| hyaB | b0973 | hydrogenase 1, large subunit | chromosome | CDS | 1032477 | 1794 | + | 0.565217 |
| hyaC | b0974 | hydrogenase 1, b-type cytochrome subunit | chromosome | CDS | 1034289 | 708 | + | 0.518362 |
| hyaD | b0975 | protein involved in processing of HyaA and HyaB proteins | chromosome | CDS | 1034993 | 588 | + | 0.588435 |
| hyaE | b0976 | protein involved in processing of HyaA and HyaB proteins | chromosome | CDS | 1035577 | 399 | + | 0.566416 |
| hyaF | b0977 | protein involved in nickel incorporation into hydrogenase-1 proteins | chromosome | CDS | 1035972 | 858 | + | 0.548951 |
| hybA | b2996 | hydrogenase 2 4Fe-4S ferredoxin-type component | chromosome | CDS | 3142176 | 987 | - | 0.545086 |
| hybB | b2995 | predicted hydrogenase 2 cytochrome b type component | chromosome | CDS | 3141008 | 1179 | - | 0.541137 |
| hybC | b2994 | hydrogenase 2, large subunit | chromosome | CDS | 3139308 | 1704 | - | 0.529343 |
| hybD | b2993 | predicted maturation element for hydrogenase 2 | chromosome | CDS | 3138814 | 495 | - | 0.547475 |
| hybE | b2992 | hydrogenase 2-specific chaperone | chromosome | CDS | 3138333 | 489 | - | 0.543967 |
| hybF | b2991 | protein involved with the maturation of hydrogenases 1 and 2 | chromosome | CDS | 3137999 | 342 | - | 0.549708 |
| hybG | b2990 | hydrogenase 2 accessory protein | chromosome | CDS | 3137738 | 249 | - | 0.522088 |
| hybO | b2997 | hydrogenase 2, small subunit | chromosome | CDS | 3143165 | 1119 | - | 0.543342 |
| hycA | b2725 | regulator of the transcriptional regulator FhlA | chromosome | CDS | 2847996 | 462 | - | 0.502164 |
| hycB | b2724 | hydrogenase 3, Fe-S subunit | chromosome | CDS | 2847260 | 612 | - | 0.573529 |
| hycC | b2723 | NADH dehydrogenase subunit N | chromosome | CDS | 2845437 | 1827 | - | 0.581828 |
| hycD | b2722 | hydrogenase 3, membrane subunit | chromosome | CDS | 2844511 | 924 | - | 0.584416 |
| hycE | b2721 | hydrogenase 3, large subunit | chromosome | CDS | 2842784 | 1710 | - | 0.569006 |
| hycF | b2720 | formate hydrogenlyase complex iron-sulfur protein | chromosome | CDS | 2842232 | 543 | - | 0.556169 |
| hycG | b2719 | hydrogenase 3 and formate hydrogenase complex, HycG subunit | chromosome | CDS | 2841465 | 768 | - | 0.563802 |
| hycH | b2718 | protein required for maturation of hydrogenase 3 | chromosome | CDS | 2841058 | 411 | - | 0.527981 |
| hycI | b2717 | protease involved in processing C-terminal end of HycE | chromosome | CDS | 2840595 | 471 | - | 0.539278 |
| hydN | b2713 | formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit | chromosome | CDS | 2835600 | 528 | - | 0.522727 |
| hyfA | b2481 | hydrogenase 4, 4Fe-4S subunit | chromosome | CDS | 2599223 | 618 | + | 0.563107 |
| hyfB | b2482 | NADH dehydrogenase subunit N | chromosome | CDS | 2599840 | 2019 | + | 0.547301 |
| hyfC | b2483 | hydrogenase 4, membrane subunit | chromosome | CDS | 2601869 | 948 | + | 0.53692 |
| hyfD | b2484 | hydrogenase 4 membrane subunit | chromosome | CDS | 2602833 | 1440 | + | 0.553472 |
| hyfE | b2485 | hydrogenase 4, membrane subunit | chromosome | CDS | 2604284 | 651 | + | 0.533026 |
| hyfF | b2486 | NADH dehydrogenase subunit N | chromosome | CDS | 2604939 | 1581 | + | 0.538899 |
| hyfG | b2487 | hydrogenase 4, subunit | chromosome | CDS | 2606509 | 1668 | + | 0.543165 |
| hyfH | b2488 | hydrogenase 4, Fe-S subunit | chromosome | CDS | 2608186 | 546 | + | 0.549451 |
| hyfI | b2489 | hydrogenase 4, Fe-S subunit | chromosome | CDS | 2608728 | 759 | + | 0.557312 |
| hyfJ | b2490 | predicted processing element hydrogenase 4 | chromosome | CDS | 2609479 | 414 | + | 0.52657 |
| hyfR | b2491 | DNA-binding transcriptional activator, formate sensing | chromosome | CDS | 2609922 | 2013 | + | 0.52608 |
| hyi | b0508 | hydroxypyruvate isomerase | chromosome | CDS | 534934 | 777 | + | 0.446589 |
| hypA | b2726 | protein involved in nickel insertion into hydrogenases 3 | chromosome | CDS | 2848669 | 351 | + | 0.529915 |
| hypB | b2727 | GTP hydrolase involved in nickel liganding into hydrogenases | chromosome | CDS | 2849023 | 873 | + | 0.552119 |
| hypC | b2728 | protein required for maturation of hydrogenases 1 and 3 | chromosome | CDS | 2849886 | 273 | + | 0.553114 |
| hypD | b2729 | protein required for maturation of hydrogenases | chromosome | CDS | 2850158 | 1122 | + | 0.554367 |
| hypE | b2730 | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein | chromosome | CDS | 2851318 | 969 | + | 0.570691 |
| hypF | b2712 | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases | chromosome | CDS | 2833195 | 2253 | - | 0.576121 |
| hyuA | b2873 | dihydropyrimidinase | chromosome | CDS | 3008050 | 1386 | + | 0.528139 |
| iaaA | b0828 | L-asparaginase | chromosome | CDS | 865791 | 966 | + | 0.565217 |
| iadA | b4328 | isoaspartyl dipeptidase | chromosome | CDS | 4556377 | 1173 | - | 0.56607 |
| iap | b2753 | aminopeptidase in alkaline phosphatase isozyme conversion | chromosome | CDS | 2874603 | 1038 | + | 0.493256 |
| ibpA | b3687 | heat shock chaperone | chromosome | CDS | 3865032 | 414 | - | 0.471014 |
| ibpB | b3686 | heat shock chaperone | chromosome | CDS | 3864492 | 429 | - | 0.48951 |
| icd | b1136 | isocitrate dehydrogenase | chromosome | CDS | 1194346 | 1251 | + | 0.501998 |
| icdC | b4519 | chromosome | pseudo | 1210648 | 153 | + | 0.457516 | |
| icdC | b4519 | chromosome | pseudo | 1210648 | 153 | + | 0.457516 | |
| iclR | b4018 | DNA-binding transcriptional repressor | chromosome | CDS | 4220827 | 825 | - | 0.541818 |
| idi | b2889 | isopentenyl-diphosphate delta-isomerase | chromosome | CDS | 3031087 | 549 | + | 0.500911 |
| idnD | b4267 | L-idonate 5-dehydrogenase, NAD-binding | chromosome | CDS | 4491398 | 1032 | - | 0.473837 |
| idnK | b4268 | D-gluconate kinase, thermosensitive | chromosome | CDS | 4492646 | 564 | + | 0.434397 |
| idnO | b4266 | gluconate 5-dehydrogenase | chromosome | CDS | 4490610 | 765 | - | 0.494118 |
| idnR | b4264 | DNA-binding transcriptional repressor, 5-gluconate-binding | chromosome | CDS | 4488164 | 999 | - | 0.47047 |
| idnT | b4265 | L-idonate and D-gluconate transporter | chromosome | CDS | 4489229 | 1320 | - | 0.506061 |
| ihfA | b1712 | integration host factor subunit alpha | chromosome | CDS | 1793277 | 300 | - | 0.5 |
| ihfB | b0912 | integration host factor subunit beta | chromosome | CDS | 963051 | 285 | + | 0.491228 |
| ileS | b0026 | isoleucyl-tRNA synthetase | chromosome | CDS | 22391 | 2817 | + | 0.557685 |
| ileT | b3852 | tRNA-Ile | chromosome | tRNA | 4035164 | 77 | + | 0.571429 |
| ileU | b3277 | tRNA-Ile | chromosome | tRNA | 3425098 | 77 | - | 0.571429 |
| ileV | b0202 | tRNA-Ile | chromosome | tRNA | 225381 | 77 | + | 0.571429 |
| ileX | b3069 | tRNA-Ile | chromosome | tRNA | 3213620 | 76 | + | 0.592105 |
| ileY | b2652 | tRNA-Ile | chromosome | tRNA | 2783784 | 76 | - | 0.565789 |
| ilvA | b3772 | threonine dehydratase | chromosome | CDS | 3953354 | 1545 | + | 0.587702 |
| ilvB | b3671 | acetolactate synthase large subunit | chromosome | CDS | 3849119 | 1689 | - | 0.563055 |
| ilvC | b3774 | ketol-acid reductoisomerase | chromosome | CDS | 3955993 | 1476 | + | 0.53794 |
| ilvD | b3771 | dihydroxy-acid dehydratase | chromosome | CDS | 3951501 | 1851 | + | 0.563479 |
| ilvE | b3770 | branched-chain amino acid aminotransferase | chromosome | CDS | 3950507 | 930 | + | 0.549462 |
| ilvG | b4488 | chromosome | pseudo | 3948583 | 1645 | + | 0.546505 | |
| ilvG | b4488 | chromosome | pseudo | 3948583 | 1645 | + | 0.546505 | |
| ilvG_1 | b3767 | chromosome | pseudo | 3948583 | 984 | + | 0.553862 | |
| ilvG_2 | b3768 | chromosome | pseudo | 3949646 | 582 | + | 0.524055 | |
| ilvH | b0078 | acetolactate synthase small subunit | chromosome | CDS | 87357 | 492 | + | 0.502033 |
| ilvI | b0077 | acetolactate synthase III large subunit | chromosome | CDS | 85630 | 1725 | + | 0.529275 |
| ilvL | b3766 | ilvG operon leader peptide | chromosome | CDS | 3948345 | 99 | + | 0.535354 |
| ilvM | b3769 | acetolactate synthase II, small subunit | chromosome | CDS | 3950224 | 264 | + | 0.492424 |
| ilvN | b3670 | acetolactate synthase small subunit | chromosome | CDS | 3848825 | 291 | - | 0.484536 |
| ilvY | b3773 | DNA-binding transcriptional dual regulator | chromosome | CDS | 3954950 | 894 | - | 0.576063 |
| imp | b0054 | organic solvent tolerance protein precursor | chromosome | CDS | 54755 | 2355 | - | 0.5138 |
| inaA | b2237 | hypothetical protein | chromosome | CDS | 2346844 | 651 | - | 0.494624 |
| infA | b0884 | translation initiation factor IF-1 | chromosome | CDS | 925448 | 219 | - | 0.484018 |
| infB | b3168 | translation initiation factor IF-2 | chromosome | CDS | 3311364 | 2673 | - | 0.534231 |
| infC | b1718 | translation initiation factor IF-3 | chromosome | CDS | 1798120 | 543 | - | 0.486188 |
| insA-1 | b0022 | IS1 repressor protein InsA | chromosome | CDS | 20233 | 276 | - | 0.528986 |
| insA-2 | b0265 | CP4-6 prophage; IS1 repressor protein InsA | chromosome | CDS | 278824 | 276 | - | 0.532609 |
| insA-3 | b0275 | CP4-6 prophage; IS1 repressor protein InsA | chromosome | CDS | 290295 | 276 | - | 0.532609 |
| insA-4 | b4516 | IS1 repressor protein InsA | chromosome | CDS | 1049056 | 276 | + | 0.528986 |
| insA-5 | b1894 | IS1 repressor protein InsA | chromosome | CDS | 1976964 | 276 | - | 0.528986 |
| insA-6 | b3444 | IS1 repressor protein InsA | chromosome | CDS | 3581506 | 276 | + | 0.528986 |
| insA-7 | b4294 | KpLE2 phage-like element; IS1 repressor protein InsA | chromosome | CDS | 4516550 | 276 | + | 0.528986 |
| insB-1 | b0021 | IS1 transposase InsAB' | chromosome | CDS | 19811 | 504 | - | 0.545635 |
| insB-2 | b0264 | CP4-6 prophage; IS1 transposase InsAB' | chromosome | CDS | 278402 | 504 | - | 0.551587 |
| insB-3 | b0274 | CP4-6 prophage; IS1 transposase InsAB' | chromosome | CDS | 289873 | 504 | - | 0.551587 |
| insB-4 | b0988 | IS1 transposase InsAB' | chromosome | CDS | 1049250 | 504 | + | 0.547619 |
| insB-5 | b1893 | IS1 transposase InsAB' | chromosome | CDS | 1976542 | 504 | - | 0.545635 |
| insB-6 | b3445 | IS1 transposase InsAB' | chromosome | CDS | 3581700 | 504 | + | 0.545635 |
| insB-7 | b4576 | chromosome | pseudo | 4516744 | 504 | + | 0.525794 | |
| insB-7 | b4576 | chromosome | pseudo | 4516744 | 504 | + | 0.525794 | |
| insB-7_1 | b4563 | chromosome | pseudo | 4516744 | 294 | + | 0.561224 | |
| insB-7_2 | b4564 | chromosome | pseudo | 4517038 | 210 | + | 0.47619 | |
| insC-1 | b0360 | IS2 insertion element repressor InsA | chromosome | CDS | 380530 | 411 | + | 0.508516 |
| insC-2 | b1403 | IS2 insertion element repressor InsA | chromosome | CDS | 1466808 | 411 | - | 0.508516 |
| insC-3 | b1997 | CP4-44 prophage; IS2 insertion element repressor InsA | chromosome | CDS | 2067839 | 411 | - | 0.508516 |
| insC-4 | b2861 | IS2 insertion element repressor InsA | chromosome | CDS | 2995257 | 411 | - | 0.508516 |
| insC-5 | b3044 | IS2 insertion element repressor InsA | chromosome | CDS | 3184164 | 411 | + | 0.508516 |
| insC-6 | b4272 | KpLE2 phage-like element; IS2 insertion element repressor InsA | chromosome | CDS | 4496250 | 411 | + | 0.508516 |
| insD-1 | b0361 | IS2 insertion element transposase InsAB' | chromosome | CDS | 380898 | 906 | + | 0.550773 |
| insD-2 | b1402 | IS2 insertion element transposase InsAB' | chromosome | CDS | 1465945 | 906 | - | 0.550773 |
| insD-3 | b1996 | CP4-44 prophage; IS2 insertion element transposase InsAB' | chromosome | CDS | 2066976 | 906 | - | 0.550773 |
| insD-4 | b2860 | IS2 insertion element transposase InsAB' | chromosome | CDS | 2994394 | 906 | - | 0.550773 |
| insD-5 | b3045 | IS2 insertion element transposase InsAB' | chromosome | CDS | 3184532 | 906 | + | 0.550773 |
| insD-6 | b4273 | KpLE2 phage-like element; IS2 insertion element transposase InsAB' | chromosome | CDS | 4496618 | 906 | + | 0.550773 |
| insD-7 | b1578 | Qin prophage; IS2 insertion element transposase InsAB', C-ter fragment (pseudogene) | chromosome | CDS | 1648905 | 657 | + | 0.543379 |
| insE-1 | b0298 | IS3 element protein InsE | chromosome | CDS | 314506 | 309 | + | 0.501618 |
| insE-2 | b0373 | IS3 element protein InsE | chromosome | CDS | 391826 | 309 | - | 0.501618 |
| insE-3 | b0540 | DLP12 prophage; IS3 element protein InsE | chromosome | CDS | 566056 | 309 | + | 0.501618 |
| insE-4 | b1027 | IS3 element protein InsE | chromosome | CDS | 1094361 | 309 | - | 0.501618 |
| insE-5 | b2088 | IS3 element protein InsE | chromosome | CDS | 2168251 | 309 | + | 0.501618 |
| insF-1 | b0299 | IS3 element protein InsF | chromosome | CDS | 314811 | 867 | + | 0.551326 |
| insF-2 | b0372 | IS3 element protein InsF | chromosome | CDS | 390963 | 867 | - | 0.551326 |
| insF-3 | b0541 | DLP12 prophage; IS3 element protein InsF | chromosome | CDS | 566361 | 867 | + | 0.551326 |
| insF-4 | b1026 | IS3 element protein InsF | chromosome | CDS | 1093498 | 867 | - | 0.551326 |
| insF-5 | b2089 | IS3 element protein InsF | chromosome | CDS | 2168556 | 867 | + | 0.551326 |
| insG | b4278 | KpLE2 phage-like element; IS4 predicted transposase | chromosome | CDS | 4500126 | 1329 | - | 0.541761 |
| insH-1 | b0259 | CP4-6 prophage; IS5 transposase and trans-activator | chromosome | CDS | 273325 | 1017 | - | 0.546706 |
| insH-10 | b3218 | IS5 transposase and trans-activator | chromosome | CDS | 3363724 | 1017 | - | 0.546706 |
| insH-11 | b3505 | IS5 transposase and trans-activator | chromosome | CDS | 3650205 | 1017 | - | 0.546706 |
| insH-2 | b0552 | DLP12 prophage; IS5 transposase and trans-activator | chromosome | CDS | 573960 | 1017 | - | 0.546706 |
| insH-3 | b0656 | IS5 transposase and trans-activator | chromosome | CDS | 687220 | 1017 | - | 0.546706 |
| insH-4 | b1331 | IS5 transposase and trans-activator | chromosome | CDS | 1394100 | 1017 | + | 0.546706 |
| insH-5 | b1370 | Rac prophage; IS5 transposase and trans-activator | chromosome | CDS | 1425770 | 981 | - | 0.554536 |
| insH-6 | b1994 | CP4-44 prophage; IS5 transposase and trans-activator | chromosome | CDS | 2064329 | 1017 | - | 0.546706 |
| insH-7 | b2030 | IS5 transposase and trans-activator | chromosome | CDS | 2099919 | 1017 | - | 0.546706 |
| insH-8 | b2192 | IS5 transposase and trans-activator | chromosome | CDS | 2287087 | 1017 | - | 0.546706 |
| insH-9 | b2982 | IS5 transposase and trans-activator | chromosome | CDS | 3128200 | 1017 | + | 0.546706 |
| insI-1 | b0256 | CP4-6 prophage; IS30 transposase | chromosome | CDS | 269827 | 1152 | + | 0.458333 |
| insI-2 | b1404 | IS30 transposase | chromosome | CDS | 1467382 | 1152 | + | 0.458333 |
| insI-3 | b4284 | KpLE2 phage-like element; IS30 transposase | chromosome | CDS | 4505489 | 1152 | - | 0.458333 |
| insJ | b3557 | IS150 protein InsA | chromosome | CDS | 3718703 | 522 | + | 0.461686 |
| insK | b3558 | IS150 conserved protein InsB | chromosome | CDS | 3719221 | 852 | + | 0.428404 |
| insL-1 | b0016 | IS186/IS421 transposase | chromosome | CDS | 15445 | 1113 | + | 0.519317 |
| insL-2 | b0582 | IS186/IS421 transposase | chromosome | CDS | 607288 | 1113 | + | 0.519317 |
| insL-3 | b2394 | IS186/IS421 transposase | chromosome | CDS | 2512353 | 1113 | + | 0.519317 |
| insM | b4561 | transposase | chromosome | CDS | 4506597 | 369 | - | 0.444444 |
| insN-1 | b0255 | CP4-6 prophage; partial regulator of insertion element IS911A | chromosome | CDS | 269466 | 405 | + | 0.437037 |
| insN-2 | b4283 | KpLE2 phage-like element; partial regulator of insertion element IS911B | chromosome | CDS | 4505220 | 267 | + | 0.430712 |
| insO-1 | b0257 | CP4-6 prophage; partial transposase of insertion element IS911A | chromosome | CDS | 271054 | 426 | + | 0.556338 |
| insO-2 | b4285 | KpLE2 phage-like element; partial transposase of insertion element IS911B | chromosome | CDS | 4506981 | 597 | + | 0.552764 |
| intA | b2622 | CP4-57 prophage; integrase | chromosome | CDS | 2754181 | 1242 | + | 0.475845 |
| intB | b4271 | KpLE2 phage-like element; predicted integrase | chromosome | CDS | 4494773 | 1191 | + | 0.457599 |
| intD | b0537 | DLP12 prophage; predicted integrase | chromosome | CDS | 564038 | 1164 | - | 0.469072 |
| intE | b1140 | e14 prophage; predicted integrase | chromosome | CDS | 1198902 | 1128 | - | 0.447695 |
| intF | b0281 | CP4-6 prophage; predicted phage integrase | chromosome | CDS | 294920 | 1401 | - | 0.443255 |
| intG | b1936 | predicted defective phage integrase (pseudogene) | chromosome | CDS | 2010526 | 279 | + | 0.480287 |
| intQ | b1579 | Qin prophage; predicted defective integrase | chromosome | CDS | 1649536 | 1197 | + | 0.421888 |
| intR | b1345 | Rac prophage; integrase | chromosome | CDS | 1410024 | 1236 | - | 0.429612 |
| intS | b2349 | CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase | chromosome | CDS | 2464567 | 1158 | + | 0.477547 |
| intZ | b2442 | CPZ-55 prophage; predicted integrase | chromosome | CDS | 2556793 | 1296 | + | 0.534722 |
| iscA | b2528 | iron-sulfur cluster assembly protein | chromosome | CDS | 2657585 | 324 | - | 0.515432 |
| iscR | b2531 | DNA-binding transcriptional repressor | chromosome | CDS | 2659665 | 489 | - | 0.535787 |
| iscS | b2530 | cysteine desulfurase | chromosome | CDS | 2658339 | 1215 | - | 0.533333 |
| iscU | b2529 | scaffold protein | chromosome | CDS | 2657925 | 387 | - | 0.501292 |
| ispA | b0421 | geranyltranstransferase | chromosome | CDS | 439426 | 900 | - | 0.542222 |
| ispB | b3187 | octaprenyl diphosphate synthase | chromosome | CDS | 3331732 | 972 | + | 0.526749 |
| ispD | b2747 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | chromosome | CDS | 2869802 | 711 | - | 0.554149 |
| ispE | b1208 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | chromosome | CDS | 1261249 | 852 | - | 0.534038 |
| ispF | b2746 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | chromosome | CDS | 2869323 | 480 | - | 0.5375 |
| ispG | b2515 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | chromosome | CDS | 2638708 | 1119 | - | 0.532618 |
| ispH | b0029 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | chromosome | CDS | 26277 | 951 | + | 0.550999 |
| ispU | b0174 | undecaprenyl pyrophosphate synthase | chromosome | CDS | 194903 | 762 | + | 0.5 |
| isrA | b4426 | unknown RNA | chromosome | misc_RNA | 1403676 | 158 | - | 0.449367 |
| isrB | b4434 | unknown RNA | chromosome | misc_RNA | 1985863 | 160 | - | 0.43125 |
| isrC | b4435 | unknown RNA | chromosome | misc_RNA | 2069339 | 204 | + | 0.426471 |
| ivbL | b3672 | ilvB operon leader peptide | chromosome | CDS | 3850913 | 99 | - | 0.585859 |
| ivy | b0220 | inhibitor of vertebrate C-lysozyme | chromosome | CDS | 240343 | 474 | + | 0.5 |
| katE | b1732 | hydroperoxidase HPII(III) (catalase) | chromosome | CDS | 1811891 | 2262 | + | 0.520778 |
| katG | b3942 | catalase/hydroperoxidase HPI(I) | chromosome | CDS | 4131858 | 2181 | + | 0.557542 |
| kbaY | b3137 | tagatose 6-phosphate aldolase 1, kbaY subunit | chromosome | CDS | 3281165 | 861 | + | 0.520325 |
| kbaZ | b3132 | tagatose 6-phosphate aldolase 1, kbaZ subunit | chromosome | CDS | 3276936 | 1281 | + | 0.552693 |
| kbl | b3617 | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 3789378 | 1197 | - | 0.542189 |
| kch | b1250 | voltage-gated potassium channel | chromosome | CDS | 1307040 | 1254 | - | 0.423445 |
| kdgK | b3526 | ketodeoxygluconokinase | chromosome | CDS | 3677442 | 930 | + | 0.570968 |
| kdgR | b1827 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1907332 | 792 | - | 0.497475 |
| kdgT | b3909 | 2-keto-3-deoxygluconate permease | chromosome | CDS | 4099713 | 984 | + | 0.527439 |
| kdpA | b0698 | potassium-transporting ATPase subunit A | chromosome | CDS | 726282 | 1674 | - | 0.554958 |
| kdpB | b0697 | potassium-transporting ATPase subunit B | chromosome | CDS | 724211 | 2049 | - | 0.562225 |
| kdpC | b0696 | potassium-transporting ATPase subunit C | chromosome | CDS | 723630 | 573 | - | 0.535777 |
| kdpD | b0695 | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein | chromosome | CDS | 720953 | 2685 | - | 0.575791 |
| kdpE | b0694 | DNA-binding response regulator in two-component regulatory system with KdpD | chromosome | CDS | 720279 | 678 | - | 0.566372 |
| kdpF | b4513 | potassium ion accessory transporter subunit | chromosome | CDS | 727955 | 90 | - | 0.488889 |
| kdsA | b1215 | 2-dehydro-3-deoxyphosphooctonate aldolase | chromosome | CDS | 1267388 | 855 | + | 0.515789 |
| kdsB | b0918 | 3-deoxy-manno-octulosonate cytidylyltransferase | chromosome | CDS | 970075 | 747 | + | 0.527443 |
| kdsC | b3198 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | chromosome | CDS | 3340295 | 567 | + | 0.525573 |
| kdsD | b3197 | D-arabinose 5-phosphate isomerase | chromosome | CDS | 3339288 | 987 | + | 0.518744 |
| kdtA | b3633 | 3-deoxy-D-manno-octulosonic-acid transferase | chromosome | CDS | 3806563 | 1278 | + | 0.539124 |
| kduD | b2842 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2980519 | 762 | - | 0.519685 |
| kduI | b2843 | 5-keto-4-deoxyuronate isomerase | chromosome | CDS | 2981310 | 837 | - | 0.495818 |
| kefA | b0465 | fused conserved protein | chromosome | CDS | 485760 | 3363 | + | 0.518882 |
| kefB | b3350 | glutathione-regulated potassium-efflux system protein | chromosome | CDS | 3476824 | 1806 | - | 0.547619 |
| kefC | b0047 | glutathione-regulated potassium-efflux system protein | chromosome | CDS | 47769 | 1863 | + | 0.555019 |
| kefF | b0046 | glutathione-regulated potassium-efflux system ancillary protein | chromosome | CDS | 47246 | 531 | + | 0.546139 |
| kefG | b3351 | glutathione-regulated potassium-efflux system ancillary protein | chromosome | CDS | 3478629 | 555 | - | 0.565766 |
| kgtP | b2587 | alpha-ketoglutarate transporter | chromosome | CDS | 2722470 | 1299 | - | 0.487298 |
| kil | b1352 | Rac prophage; inhibitor of ftsZ, killing protein | chromosome | CDS | 1416032 | 222 | - | 0.418919 |
| kptA | b4331 | RNA 2'-phosphotransferase-like protein | chromosome | CDS | 4558953 | 555 | + | 0.508108 |
| ksgA | b0051 | dimethyladenosine transferase | chromosome | CDS | 51609 | 822 | - | 0.530414 |
| lacA | b0342 | galactoside O-acetyltransferase | chromosome | CDS | 360473 | 612 | - | 0.428105 |
| lacI | b0345 | lac repressor | chromosome | CDS | 365652 | 1083 | - | 0.56325 |
| lacY | b0343 | galactoside permease | chromosome | CDS | 361150 | 1254 | - | 0.463317 |
| lacZ | b0344 | beta-D-galactosidase | chromosome | CDS | 362455 | 3075 | - | 0.562602 |
| lamB | b4036 | maltoporin precursor | chromosome | CDS | 4245994 | 1341 | + | 0.516779 |
| lar | b1348 | Rac prophage; restriction alleviation protein | chromosome | CDS | 1411757 | 195 | - | 0.405128 |
| ldcA | b1192 | L,D-carboxypeptidase A | chromosome | CDS | 1241389 | 915 | - | 0.530055 |
| ldcC | b0186 | lysine decarboxylase 2, constitutive | chromosome | CDS | 209679 | 2142 | + | 0.50887 |
| ldhA | b1380 | D-lactate dehydrogenase | chromosome | CDS | 1439878 | 990 | - | 0.50101 |
| ldrA | b4419 | toxic polypeptide, small | chromosome | CDS | 1268391 | 108 | - | 0.555556 |
| ldrB | b4421 | toxic polypeptide, small | chromosome | CDS | 1268926 | 108 | - | 0.583333 |
| ldrC | b4423 | toxic polypeptide, small | chromosome | CDS | 1269461 | 108 | - | 0.555556 |
| ldrD | b4453 | toxic polypeptide, small | chromosome | CDS | 3698003 | 108 | - | 0.527778 |
| lepA | b2569 | GTP-binding protein LepA | chromosome | CDS | 2703347 | 1800 | - | 0.537222 |
| lepB | b2568 | leader peptidase (signal peptidase I) | chromosome | CDS | 2702357 | 975 | - | 0.52 |
| leuA | b0074 | 2-isopropylmalate synthase | chromosome | CDS | 81958 | 1572 | - | 0.529898 |
| leuB | b0073 | 3-isopropylmalate dehydrogenase | chromosome | CDS | 80867 | 1092 | - | 0.554945 |
| leuC | b0072 | isopropylmalate isomerase large subunit | chromosome | CDS | 79464 | 1401 | - | 0.557459 |
| leuD | b0071 | isopropylmalate isomerase small subunit | chromosome | CDS | 78848 | 606 | - | 0.514852 |
| leuL | b0075 | leu operon leader peptide | chromosome | CDS | 83622 | 87 | - | 0.471264 |
| leuO | b0076 | leucine transcriptional activator | chromosome | CDS | 84368 | 945 | + | 0.457143 |
| leuP | b4369 | tRNA-Leu | chromosome | tRNA | 4604223 | 87 | - | 0.597701 |
| leuQ | b4370 | tRNA-Leu | chromosome | tRNA | 4604338 | 87 | - | 0.609195 |
| leuS | b0642 | leucyl-tRNA synthetase | chromosome | CDS | 671424 | 2583 | - | 0.533488 |
| leuT | b3798 | tRNA-Leu | chromosome | tRNA | 3980629 | 87 | + | 0.609195 |
| leuU | b3174 | tRNA-Leu | chromosome | tRNA | 3320094 | 87 | - | 0.574713 |
| leuV | b4368 | tRNA-Leu | chromosome | tRNA | 4604102 | 87 | - | 0.609195 |
| leuW | b0672 | tRNA-Leu | chromosome | tRNA | 696186 | 85 | - | 0.6 |
| leuX | b4270 | tRNA-Leu | chromosome | tRNA | 4494428 | 85 | + | 0.541176 |
| leuZ | b1909 | tRNA-Leu | chromosome | tRNA | 1989839 | 87 | - | 0.597701 |
| lexA | b4043 | LexA repressor | chromosome | CDS | 4255138 | 609 | + | 0.518883 |
| lgt | b2828 | prolipoprotein diacylglyceryl transferase | chromosome | CDS | 2963184 | 876 | - | 0.528539 |
| lhr | b1653 | predicted ATP-dependent helicase | chromosome | CDS | 1727111 | 4617 | + | 0.568984 |
| ligA | b2411 | NAD-dependent DNA ligase LigA | chromosome | CDS | 2526183 | 2016 | - | 0.544147 |
| ligB | b3647 | NAD-dependent DNA ligase LigB | chromosome | CDS | 3817511 | 1683 | - | 0.525847 |
| ligT | b0147 | 2'-5' RNA ligase | chromosome | CDS | 161501 | 531 | - | 0.559322 |
| lipA | b0628 | lipoyl synthase | chromosome | CDS | 658474 | 966 | - | 0.534162 |
| lipB | b0630 | lipoyltransferase | chromosome | CDS | 660860 | 642 | - | 0.476636 |
| lit | b1139 | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression | chromosome | CDS | 1197918 | 894 | + | 0.368009 |
| livF | b3454 | leucine/isoleucine/valine transporter subunit | chromosome | CDS | 3590747 | 714 | - | 0.567227 |
| livG | b3455 | leucine/isoleucine/valine transporter subunit | chromosome | CDS | 3591462 | 768 | - | 0.552083 |
| livH | b3457 | leucine/isoleucine/valine transporter subunit | chromosome | CDS | 3593500 | 927 | - | 0.562028 |
| livJ | b3460 | leucine/isoleucine/valine transporter subunit | chromosome | CDS | 3596578 | 1104 | - | 0.544384 |
| livK | b3458 | leucine transporter subunit | chromosome | CDS | 3594474 | 1110 | - | 0.541441 |
| livM | b3456 | leucine/isoleucine/valine transporter subunit | chromosome | CDS | 3592226 | 1278 | - | 0.565728 |
| lldD | b3605 | L-lactate dehydrogenase, FMN-linked | chromosome | CDS | 3777850 | 1191 | + | 0.556675 |
| lldP | b3603 | L-lactate permease | chromosome | CDS | 3775422 | 1656 | + | 0.551328 |
| lldR | b3604 | DNA-binding transcriptional repressor | chromosome | CDS | 3777077 | 777 | + | 0.540541 |
| lnt | b0657 | apolipoprotein N-acyltransferase | chromosome | CDS | 688566 | 1539 | - | 0.556855 |
| lolA | b0891 | outer-membrane lipoprotein carrier protein precursor | chromosome | CDS | 936592 | 615 | + | 0.508943 |
| lolB | b1209 | outer membrane lipoprotein LolB precursor | chromosome | CDS | 1262100 | 624 | - | 0.514423 |
| lolC | b1116 | outer membrane-specific lipoprotein transporter subunit | chromosome | CDS | 1174650 | 1200 | + | 0.541667 |
| lolD | b1117 | outer membrane-specific lipoprotein transporter subunit | chromosome | CDS | 1175842 | 702 | + | 0.551282 |
| lolE | b1118 | outer membrane-specific lipoprotein transporter subunit | chromosome | CDS | 1176543 | 1245 | + | 0.518875 |
| lomR | b4570 | chromosome | pseudo | 1425419 | 1590 | + | 0.545283 | |
| lomR | b4570 | chromosome | pseudo | 1425419 | 1590 | + | 0.545283 | |
| lomR_1 | b1369 | Rac prophage; predicted protein, N-ter fragment (pseudogene) | chromosome | CDS | 1425482 | 156 | + | 0.564103 |
| lomR_2 | b1371 | Rac prophage; predicted protein, C-ter fragment (pseudogene) | chromosome | CDS | 1426838 | 171 | + | 0.578947 |
| lon | b0439 | DNA-binding ATP-dependent protease La | chromosome | CDS | 458112 | 2355 | + | 0.523142 |
| lpcA | b0222 | phosphoheptose isomerase | chromosome | CDS | 243543 | 579 | + | 0.509499 |
| lpd | b0116 | dihydrolipoamide dehydrogenase | chromosome | CDS | 127912 | 1425 | + | 0.530526 |
| lplA | b4386 | lipoate-protein ligase A | chromosome | CDS | 4621124 | 1017 | - | 0.578171 |
| lpp | b1677 | murein lipoprotein | chromosome | CDS | 1755445 | 237 | + | 0.506329 |
| lpxA | b0181 | UDP-N-acetylglucosamine acyltransferase | chromosome | CDS | 202560 | 789 | + | 0.531052 |
| lpxB | b0182 | lipid-A-disaccharide synthase | chromosome | CDS | 203348 | 1149 | + | 0.537859 |
| lpxC | b0096 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | chromosome | CDS | 106557 | 918 | + | 0.510893 |
| lpxD | b0179 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | chromosome | CDS | 200971 | 1026 | + | 0.528265 |
| lpxH | b0524 | UDP-2,3-diacylglucosamine hydrolase | chromosome | CDS | 552441 | 723 | - | 0.544952 |
| lpxK | b0915 | tetraacyldisaccharide 4'-kinase | chromosome | CDS | 967589 | 987 | + | 0.547112 |
| lpxL | b1054 | lipid A biosynthesis lauroyl acyltransferase | chromosome | CDS | 1114885 | 921 | - | 0.529859 |
| lpxM | b1855 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | chromosome | CDS | 1937246 | 972 | - | 0.515432 |
| lrhA | b2289 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes | chromosome | CDS | 2403725 | 939 | - | 0.497338 |
| lrp | b0889 | DNA-binding transcriptional dual regulator, leucine-binding | chromosome | CDS | 931818 | 495 | + | 0.478788 |
| lspA | b0027 | signal peptidase II | chromosome | CDS | 25207 | 495 | + | 0.535354 |
| lsrA | b1513 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 1599514 | 1536 | + | 0.533203 |
| lsrB | b1516 | AI2 transporter | chromosome | CDS | 1603075 | 1023 | + | 0.496579 |
| lsrC | b1514 | AI2 transporter | chromosome | CDS | 1601043 | 1029 | + | 0.537415 |
| lsrD | b1515 | AI2 transporter | chromosome | CDS | 1602071 | 993 | + | 0.532729 |
| lsrF | b1517 | hypothetical protein | chromosome | CDS | 1604124 | 876 | + | 0.496575 |
| lsrG | b1518 | autoinducer-2 (AI-2) modifying protein LsrG | chromosome | CDS | 1605023 | 291 | + | 0.463918 |
| lsrK | b1511 | autoinducer-2 (AI-2) kinase | chromosome | CDS | 1596641 | 1593 | - | 0.522285 |
| lsrR | b1512 | lsr operon transcriptional repressor | chromosome | CDS | 1598312 | 954 | - | 0.507338 |
| ltaE | b0870 | L-allo-threonine aldolase, PLP-dependent | chromosome | CDS | 907516 | 1002 | - | 0.561876 |
| luxS | b2687 | S-ribosylhomocysteinase | chromosome | CDS | 2812240 | 516 | - | 0.515504 |
| lysA | b2838 | diaminopimelate decarboxylase, PLP-binding | chromosome | CDS | 2975659 | 1263 | - | 0.530483 |
| lysC | b4024 | aspartate kinase III | chromosome | CDS | 4229907 | 1350 | - | 0.538519 |
| lysP | b2156 | lysine transporter | chromosome | CDS | 2245085 | 1470 | - | 0.534694 |
| lysQ | b0749 | tRNA-Lys | chromosome | tRNA | 780800 | 76 | + | 0.5 |
| lysR | b2839 | DNA-binding transcriptional dual regulator | chromosome | CDS | 2977043 | 936 | + | 0.534188 |
| lysS | b2890 | lysine tRNA synthetase, constitutive | chromosome | CDS | 3031679 | 1518 | - | 0.530962 |
| lysT | b0743 | tRNA-Lys | chromosome | tRNA | 779777 | 76 | + | 0.5 |
| lysU | b4129 | lysine tRNA synthetase, inducible | chromosome | CDS | 4351223 | 1518 | - | 0.474308 |
| lysV | b2404 | tRNA-Lys | chromosome | tRNA | 2519275 | 76 | + | 0.5 |
| lysW | b0745 | tRNA-Lys | chromosome | tRNA | 780066 | 76 | + | 0.5 |
| lysY | b0747 | tRNA-Lys | chromosome | tRNA | 780370 | 76 | + | 0.5 |
| lysZ | b0748 | tRNA-Lys | chromosome | tRNA | 780592 | 76 | + | 0.5 |
| lyxK | b3580 | L-xylulose kinase | chromosome | CDS | 3745107 | 1497 | + | 0.574482 |
| maa | b0459 | maltose O-acetyltransferase | chromosome | CDS | 478591 | 552 | - | 0.483696 |
| macA | b0878 | macrolide transporter subunit, membrane fusion protein (MFP) component | chromosome | CDS | 918458 | 1116 | + | 0.530466 |
| macB | b0879 | fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component | chromosome | CDS | 919570 | 1947 | + | 0.539291 |
| maeB | b2463 | malic enzyme | chromosome | CDS | 2574120 | 2280 | - | 0.541228 |
| mak | b0394 | fructokinase | chromosome | CDS | 409368 | 909 | + | 0.556656 |
| malE | b4034 | maltose ABC transporter periplasmic protein | chromosome | CDS | 4243252 | 1191 | - | 0.510495 |
| malF | b4033 | maltose transporter subunit | chromosome | CDS | 4241554 | 1545 | - | 0.532686 |
| malG | b4032 | maltose transporter subunit | chromosome | CDS | 4240649 | 891 | - | 0.545455 |
| malI | b1620 | DNA-binding transcriptional repressor | chromosome | CDS | 1696176 | 1029 | - | 0.539359 |
| malK | b4035 | fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein | chromosome | CDS | 4244807 | 1116 | + | 0.548387 |
| malM | b4037 | maltose regulon periplasmic protein | chromosome | CDS | 4247577 | 921 | + | 0.534202 |
| malP | b3417 | maltodextrin phosphorylase | chromosome | CDS | 3548102 | 2394 | - | 0.522974 |
| malQ | b3416 | 4-alpha-glucanotransferase (amylomaltase) | chromosome | CDS | 3546008 | 2085 | - | 0.551559 |
| malS | b3571 | periplasmic alpha-amylase precursor | chromosome | CDS | 3735520 | 2031 | + | 0.528311 |
| malT | b3418 | transcriptional regulator MalT | chromosome | CDS | 3551107 | 2706 | + | 0.54102 |
| malX | b1621 | fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component | chromosome | CDS | 1697379 | 1593 | + | 0.527307 |
| malY | b1622 | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon | chromosome | CDS | 1698981 | 1173 | + | 0.509804 |
| malZ | b0403 | maltodextrin glucosidase | chromosome | CDS | 421739 | 1818 | + | 0.545655 |
| manA | b1613 | mannose-6-phosphate isomerase | chromosome | CDS | 1686600 | 1176 | + | 0.507653 |
| manX | b1817 | fused mannose-specific PTS enzymes: IIA component/IIB component | chromosome | CDS | 1900072 | 972 | + | 0.503086 |
| manY | b1818 | mannose-specific enzyme IIC component of PTS | chromosome | CDS | 1901106 | 801 | + | 0.515606 |
| manZ | b1819 | mannose-specific enzyme IID component of PTS | chromosome | CDS | 1901910 | 861 | + | 0.527294 |
| maoC | b1387 | fused aldehyde dehydrogenase/enoyl-CoA hydratase | chromosome | CDS | 1449621 | 2046 | - | 0.542033 |
| map | b0168 | methionine aminopeptidase | chromosome | CDS | 188712 | 795 | - | 0.504403 |
| marA | b1531 | DNA-binding transcriptional dual activator of multiple antibiotic resistance | chromosome | CDS | 1617598 | 384 | + | 0.458333 |
| marB | b1532 | hypothetical protein | chromosome | CDS | 1618013 | 219 | + | 0.502283 |
| marC | b1529 | predicted transporter | chromosome | CDS | 1616267 | 666 | - | 0.510511 |
| marR | b1530 | DNA-binding transcriptional repressor of multiple antibiotic resistance | chromosome | CDS | 1617144 | 435 | + | 0.494253 |
| mazG | b2781 | nucleoside triphosphate pyrophosphohydrolase | chromosome | CDS | 2907916 | 792 | - | 0.507576 |
| mbhA | b0230 | chromosome | pseudo | 250072 | 756 | + | 0.527778 | |
| mbhA | b0230 | chromosome | pseudo | 250072 | 756 | + | 0.527778 | |
| mcrA | b1159 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B | chromosome | CDS | 1209569 | 834 | + | 0.383693 |
| mcrB | b4346 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB | chromosome | CDS | 4575981 | 1380 | - | 0.403623 |
| mcrC | b4345 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC | chromosome | CDS | 4574935 | 1047 | - | 0.374403 |
| mdaB | b3028 | NADPH quinone reductase | chromosome | CDS | 3170552 | 582 | + | 0.505155 |
| mdh | b3236 | malate dehydrogenase | chromosome | CDS | 3381352 | 939 | - | 0.522897 |
| mdlA | b0448 | fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 468095 | 1773 | + | 0.540327 |
| mdlB | b0449 | fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 469860 | 1782 | + | 0.562851 |
| mdoB | b4359 | phosphoglycerol transferase I | chromosome | CDS | 4595173 | 2292 | - | 0.52007 |
| mdoC | b1047 | glucans biosynthesis protein | chromosome | CDS | 1107007 | 1158 | - | 0.438687 |
| mdoD | b1424 | glucan biosynthesis protein, periplasmic | chromosome | CDS | 1494910 | 1626 | + | 0.51107 |
| mdoG | b1048 | glucan biosynthesis protein, periplasmic | chromosome | CDS | 1108558 | 1536 | + | 0.498698 |
| mdoH | b1049 | glucosyltransferase MdoH | chromosome | CDS | 1110086 | 2544 | + | 0.549528 |
| mdtA | b2074 | multidrug efflux system, subunit A | chromosome | CDS | 2152040 | 1248 | + | 0.552885 |
| mdtB | b2075 | multidrug efflux system, subunit B | chromosome | CDS | 2153287 | 3123 | + | 0.566122 |
| mdtC | b2076 | multidrug efflux system, subunit C | chromosome | CDS | 2156410 | 3078 | + | 0.562703 |
| mdtD | b2077 | multidrug efflux system protein | chromosome | CDS | 2159488 | 1416 | + | 0.555085 |
| mdtE | b3513 | multidrug resistance efflux transporter | chromosome | CDS | 3657255 | 1158 | + | 0.545769 |
| mdtF | b3514 | multidrug transporter, RpoS-dependent | chromosome | CDS | 3658437 | 3114 | + | 0.530186 |
| mdtG | b1053 | predicted drug efflux system | chromosome | CDS | 1113487 | 1227 | - | 0.524857 |
| mdtH | b1065 | predicted drug efflux system | chromosome | CDS | 1123341 | 1209 | - | 0.55335 |
| mdtI | b1599 | multidrug efflux system transporter | chromosome | CDS | 1670844 | 330 | - | 0.515152 |
| mdtJ | b1600 | multidrug efflux system transporter | chromosome | CDS | 1671160 | 366 | - | 0.423497 |
| mdtK | b1663 | multidrug efflux protein NorM | chromosome | CDS | 1741481 | 1374 | + | 0.52984 |
| mdtL | b3710 | multidrug efflux system protein | chromosome | CDS | 3889638 | 1176 | + | 0.530612 |
| melA | b4119 | alpha-galactosidase, NAD(P)-binding | chromosome | CDS | 4339934 | 1356 | + | 0.524336 |
| melB | b4120 | melibiose:sodium symporter | chromosome | CDS | 4341404 | 1410 | + | 0.459574 |
| melR | b4118 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4338743 | 909 | - | 0.50275 |
| menA | b3930 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | chromosome | CDS | 4117446 | 927 | - | 0.533981 |
| menB | b2262 | naphthoate synthase | chromosome | CDS | 2373984 | 858 | - | 0.555944 |
| menC | b2261 | O-succinylbenzoate synthase | chromosome | CDS | 2373022 | 963 | - | 0.589823 |
| menD | b2264 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | chromosome | CDS | 2375611 | 1671 | - | 0.581089 |
| menE | b2260 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2371670 | 1356 | - | 0.560472 |
| menF | b2265 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2377370 | 1296 | - | 0.533951 |
| mepA | b2328 | penicillin-insensitive murein endopeptidase | chromosome | CDS | 2443582 | 825 | - | 0.553939 |
| metA | b4013 | homoserine O-succinyltransferase | chromosome | CDS | 4212303 | 930 | + | 0.5 |
| metB | b3939 | cystathionine gamma-synthase | chromosome | CDS | 4126695 | 1161 | + | 0.549526 |
| metC | b3008 | cystathionine beta-lyase | chromosome | CDS | 3150258 | 1188 | + | 0.510101 |
| metE | b3829 | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | chromosome | CDS | 4011076 | 2262 | + | 0.562334 |
| metF | b3941 | 5,10-methylenetetrahydrofolate reductase | chromosome | CDS | 4130639 | 891 | + | 0.518519 |
| metG | b2114 | methionyl-tRNA synthetase | chromosome | CDS | 2192322 | 2034 | + | 0.530482 |
| metH | b4019 | B12-dependent methionine synthase | chromosome | CDS | 4221851 | 3684 | + | 0.55836 |
| metI | b0198 | DL-methionine transporter subunit | chromosome | CDS | 220968 | 654 | - | 0.522936 |
| metJ | b3938 | transcriptional repressor protein MetJ | chromosome | CDS | 4126101 | 318 | - | 0.518868 |
| metK | b2942 | S-adenosylmethionine synthetase | chromosome | CDS | 3084728 | 1155 | + | 0.532468 |
| metL | b3940 | bifunctional aspartate kinase II/homoserine dehydrogenase II | chromosome | CDS | 4127858 | 2433 | + | 0.583231 |
| metN | b0199 | DL-methionine transporter subunit | chromosome | CDS | 221614 | 1032 | - | 0.52907 |
| metQ | b0197 | DL-methionine transporter subunit | chromosome | CDS | 220113 | 816 | - | 0.491422 |
| metR | b3828 | DNA-binding transcriptional activator, homocysteine-binding | chromosome | CDS | 4009886 | 954 | - | 0.562893 |
| metT | b0673 | tRNA-Met | chromosome | tRNA | 696280 | 77 | - | 0.519481 |
| metU | b0666 | tRNA-Met | chromosome | tRNA | 695887 | 77 | - | 0.519481 |
| metV | b2816 | tRNA-Met | chromosome | tRNA | 2945629 | 77 | + | 0.662338 |
| metW | b2815 | tRNA-Met | chromosome | tRNA | 2945519 | 77 | + | 0.662338 |
| metY | b3171 | tRNA-Met | chromosome | tRNA | 3316235 | 77 | - | 0.649351 |
| metZ | b2814 | tRNA-Met | chromosome | tRNA | 2945409 | 77 | + | 0.662338 |
| mfd | b1114 | transcription-repair coupling factor | chromosome | CDS | 1169741 | 3447 | - | 0.547723 |
| mglA | b2149 | fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 2235791 | 1521 | - | 0.453649 |
| mglB | b2150 | methyl-galactoside transporter subunit | chromosome | CDS | 2237372 | 999 | - | 0.510511 |
| mglC | b2148 | beta-methylgalactoside transporter inner membrane component | chromosome | CDS | 2234765 | 1011 | - | 0.502473 |
| mgsA | b0963 | methylglyoxal synthase | chromosome | CDS | 1025780 | 459 | - | 0.527233 |
| mgtA | b4242 | magnesium transporter | chromosome | CDS | 4465648 | 2697 | + | 0.524657 |
| mhpA | b0347 | 3-(3-hydroxyphenyl)propionate hydroxylase | chromosome | CDS | 367835 | 1665 | + | 0.56997 |
| mhpB | b0348 | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | chromosome | CDS | 369501 | 945 | + | 0.577778 |
| mhpC | b0349 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | chromosome | CDS | 370448 | 882 | + | 0.545351 |
| mhpD | b0350 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 371339 | 810 | + | 0.551852 |
| mhpE | b0352 | 4-hydroxy-2-ketovalerate aldolase | chromosome | CDS | 373092 | 1014 | + | 0.565089 |
| mhpF | b0351 | acetaldehyde dehydrogenase | chromosome | CDS | 372145 | 951 | + | 0.54469 |
| mhpR | b0346 | DNA-binding transcriptional activator, 3HPP-binding | chromosome | CDS | 366811 | 948 | - | 0.53692 |
| mhpT | b0353 | predicted 3-hydroxyphenylpropionic transporter | chromosome | CDS | 374683 | 1212 | + | 0.574257 |
| miaA | b4171 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 4397275 | 951 | + | 0.534175 |
| miaB | b0661 | isopentenyl-adenosine A37 tRNA methylthiolase | chromosome | CDS | 692754 | 1425 | - | 0.541754 |
| micC | b4427 | regulatory sRNA | chromosome | misc_RNA | 1435145 | 109 | + | 0.385321 |
| micF | b4439 | regulatory sRNA | chromosome | misc_RNA | 2311106 | 93 | + | 0.354839 |
| minC | b1176 | septum formation inhibitor | chromosome | CDS | 1224608 | 696 | - | 0.510057 |
| minD | b1175 | membrane ATPase of the MinC-MinD-MinE system | chromosome | CDS | 1223772 | 813 | - | 0.499385 |
| minE | b1174 | cell division topological specificity factor MinE | chromosome | CDS | 1223502 | 267 | - | 0.434457 |
| mioC | b3742 | flavodoxin | chromosome | CDS | 3924035 | 444 | - | 0.5 |
| mipA | b1782 | scaffolding protein for murein synthesizing machinery | chromosome | CDS | 1863750 | 747 | - | 0.522088 |
| mlrA | b2127 | DNA-binding transcriptional regulator | chromosome | CDS | 2212888 | 732 | + | 0.528689 |
| mltA | b2813 | membrane-bound lytic murein transglycosylase A | chromosome | CDS | 2944103 | 1098 | - | 0.528233 |
| mltB | b2701 | membrane-bound lytic murein transglycosylase B | chromosome | CDS | 2822513 | 1086 | - | 0.551565 |
| mltC | b2963 | membrane-bound lytic murein transglycosylase C | chromosome | CDS | 3102455 | 1080 | + | 0.511111 |
| mltD | b0211 | predicted membrane-bound lytic murein transglycosylase D | chromosome | CDS | 232597 | 1359 | - | 0.5195 |
| mmuM | b0261 | homocysteine methyltransferase | chromosome | CDS | 275939 | 933 | + | 0.60343 |
| mmuP | b0260 | CP4-6 prophage; predicted S-methylmethionine transporter | chromosome | CDS | 274549 | 1404 | + | 0.548433 |
| mngA | b0731 | fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component | chromosome | CDS | 765207 | 1977 | + | 0.545776 |
| mngB | b0732 | alpha-mannosidase | chromosome | CDS | 767201 | 2634 | + | 0.493546 |
| mngR | b0730 | DNA-binding transcriptional dual regulator, fatty-acyl-binding | chromosome | CDS | 764376 | 723 | - | 0.481328 |
| mntH | b2392 | manganese transport protein MntH | chromosome | CDS | 2509490 | 1239 | - | 0.532688 |
| mntR | b0817 | DNA-binding transcriptional regulator of mntH | chromosome | CDS | 852406 | 468 | + | 0.540598 |
| moaA | b0781 | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 816267 | 990 | + | 0.541414 |
| moaB | b0782 | molybdopterin biosynthesis protein B | chromosome | CDS | 817278 | 513 | + | 0.520468 |
| moaC | b0783 | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 817793 | 486 | + | 0.559671 |
| moaD | b0784 | molybdopterin synthase, small subunit | chromosome | CDS | 818271 | 246 | + | 0.556911 |
| moaE | b0785 | molybdopterin synthase, large subunit | chromosome | CDS | 818518 | 453 | + | 0.567329 |
| mobA | b3857 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 4039438 | 585 | - | 0.500855 |
| mobB | b3856 | molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 4038929 | 513 | - | 0.487329 |
| modA | b0763 | molybdate transporter subunit | chromosome | CDS | 794312 | 774 | + | 0.509044 |
| modB | b0764 | molybdate ABC transporter permease protein | chromosome | CDS | 795085 | 690 | + | 0.54058 |
| modC | b0765 | molybdate transporter subunit | chromosome | CDS | 795777 | 1059 | + | 0.535411 |
| modE | b0761 | DNA-binding transcriptional dual regulator | chromosome | CDS | 793079 | 789 | - | 0.525982 |
| modF | b0760 | fused molybdate transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 791539 | 1473 | - | 0.526816 |
| moeA | b0827 | molybdopterin biosynthesis protein | chromosome | CDS | 864352 | 1236 | - | 0.563916 |
| moeB | b0826 | molybdopterin biosynthesis protein MoeB | chromosome | CDS | 863603 | 750 | - | 0.552 |
| mog | b0009 | molybdenum cofactor biosynthesis protein | chromosome | CDS | 9306 | 588 | + | 0.544218 |
| mokB | b1420 | regulatory peptide | chromosome | CDS | 1489986 | 168 | - | 0.511905 |
| mokC | b0018 | regulatory protein for HokC, overlaps CDS of hokC | chromosome | CDS | 16751 | 210 | - | 0.514286 |
| molR | b4499 | chromosome | pseudo | 2194496 | 3796 | + | 0.502898 | |
| molR | b4499 | chromosome | pseudo | 2194496 | 3796 | + | 0.502898 | |
| molR_1 | b2115 | chromosome | pseudo | 2194496 | 825 | + | 0.458182 | |
| molR_2 | b2116 | chromosome | pseudo | 2195432 | 1938 | + | 0.506708 | |
| molR_3 | b2117 | chromosome | pseudo | 2197344 | 948 | + | 0.544304 | |
| motA | b1890 | flagellar motor protein MotA | chromosome | CDS | 1974276 | 888 | - | 0.513514 |
| motB | b1889 | flagellar motor protein MotB | chromosome | CDS | 1973353 | 927 | - | 0.531823 |
| mpaA | b1326 | murein peptide amidase A | chromosome | CDS | 1387894 | 789 | - | 0.538657 |
| mpl | b4233 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | chromosome | CDS | 4453808 | 1374 | + | 0.55313 |
| mppA | b1329 | murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit | chromosome | CDS | 1391251 | 1614 | + | 0.479554 |
| mprA | b2684 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux | chromosome | CDS | 2808792 | 531 | + | 0.491525 |
| mqo | b2210 | malate:quinone oxidoreductase | chromosome | CDS | 2303130 | 1647 | - | 0.540376 |
| mraW | b0082 | S-adenosyl-methyltransferase | chromosome | CDS | 90094 | 942 | + | 0.552017 |
| mraY | b0087 | phospho-N-acetylmuramoyl-pentapeptide-transferase | chromosome | CDS | 96002 | 1083 | + | 0.533703 |
| mraZ | b0081 | hypothetical protein | chromosome | CDS | 89634 | 459 | + | 0.520697 |
| mrcA | b3396 | fused penicillin-binding protein 1a: murein transglycosylase/murein transpeptidase | chromosome | CDS | 3520893 | 2553 | + | 0.555425 |
| mrcB | b0149 | penicillin-binding protein 1b | chromosome | CDS | 164730 | 2535 | + | 0.551479 |
| mrdA | b0635 | transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) | chromosome | CDS | 665539 | 1902 | - | 0.525237 |
| mrdB | b0634 | cell wall shape-determining protein | chromosome | CDS | 664424 | 1113 | - | 0.520216 |
| mreB | b3251 | cell wall structural complex MreBCD, actin-like component MreB | chromosome | CDS | 3398066 | 1044 | - | 0.543103 |
| mreC | b3250 | cell wall structural complex MreBCD transmembrane component MreC | chromosome | CDS | 3396897 | 1104 | - | 0.559783 |
| mreD | b3249 | cell wall structural complex MreBCD transmembrane component MreD | chromosome | CDS | 3396409 | 489 | - | 0.513292 |
| mrp | b2113 | antiporter inner membrane protein | chromosome | CDS | 2191081 | 1110 | - | 0.53964 |
| mrr | b4351 | methylated adenine and cytosine restriction protein | chromosome | CDS | 4584972 | 915 | + | 0.506011 |
| msbA | b0914 | fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 965844 | 1749 | + | 0.508862 |
| mscL | b3291 | large-conductance mechanosensitive channel | chromosome | CDS | 3436046 | 411 | + | 0.450122 |
| mscS | b2924 | mechanosensitive channel | chromosome | CDS | 3066969 | 861 | - | 0.499419 |
| msrA | b4219 | methionine sulfoxide reductase A | chromosome | CDS | 4439561 | 639 | - | 0.544601 |
| msyB | b1051 | hypothetical protein | chromosome | CDS | 1113030 | 375 | - | 0.501333 |
| mtgA | b3208 | monofunctional biosynthetic peptidoglycan transglycosylase | chromosome | CDS | 3347103 | 729 | - | 0.51989 |
| mtlA | b3599 | fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components | chromosome | CDS | 3770304 | 1914 | + | 0.538662 |
| mtlD | b3600 | mannitol-1-phosphate 5-dehydrogenase | chromosome | CDS | 3772447 | 1149 | + | 0.523934 |
| mtlR | b3601 | DNA-binding repressor | chromosome | CDS | 3773595 | 588 | + | 0.510204 |
| mtr | b3161 | tryptophan transporter of high affinity | chromosome | CDS | 3302595 | 1245 | - | 0.530924 |
| mukB | b0924 | cell division protein MukB | chromosome | CDS | 975549 | 4461 | + | 0.556602 |
| mukE | b0923 | condesin subunit E | chromosome | CDS | 974872 | 678 | + | 0.523599 |
| mukF | b0922 | condesin subunit F | chromosome | CDS | 973542 | 1323 | + | 0.528345 |
| murA | b3189 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | chromosome | CDS | 3333257 | 1260 | - | 0.533333 |
| murB | b3972 | UDP-N-acetylenolpyruvoylglucosamine reductase | chromosome | CDS | 4170080 | 1029 | + | 0.45967 |
| murC | b0091 | UDP-N-acetylmuramate--L-alanine ligase | chromosome | CDS | 100765 | 1476 | + | 0.547425 |
| murD | b0088 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase | chromosome | CDS | 97087 | 1317 | + | 0.548975 |
| murE | b0085 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase | chromosome | CDS | 93166 | 1488 | + | 0.56586 |
| murF | b0086 | UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase | chromosome | CDS | 94650 | 1359 | + | 0.551141 |
| murG | b0090 | N-acetylglucosaminyl transferase | chromosome | CDS | 99644 | 1068 | + | 0.560861 |
| murI | b3967 | glutamate racemase | chromosome | CDS | 4163451 | 858 | + | 0.515152 |
| murP | b2429 | N-acetylmuramic acid phosphotransfer permease | chromosome | CDS | 2544695 | 1425 | + | 0.565614 |
| mutH | b2831 | DNA mismatch repair protein | chromosome | CDS | 2967684 | 690 | + | 0.536232 |
| mutL | b4170 | DNA mismatch repair protein | chromosome | CDS | 4395435 | 1848 | + | 0.562771 |
| mutM | b3635 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 3808366 | 810 | - | 0.538272 |
| mutS | b2733 | DNA mismatch repair protein | chromosome | CDS | 2855115 | 2562 | + | 0.56128 |
| mutT | b0099 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP | chromosome | CDS | 111044 | 390 | + | 0.492308 |
| mutY | b2961 | adenine DNA glycosylase | chromosome | CDS | 3101035 | 1053 | + | 0.551757 |
| mviM | b1068 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 1126029 | 924 | + | 0.55303 |
| mviN | b1069 | predicted inner membrane protein | chromosome | CDS | 1127062 | 1536 | + | 0.537109 |
| nac | b1988 | DNA-binding transcriptional dual regulator of nitrogen assimilation | chromosome | CDS | 2059040 | 918 | - | 0.481481 |
| nadA | b0750 | quinolinate synthetase | chromosome | CDS | 781308 | 1044 | + | 0.501916 |
| nadB | b2574 | L-aspartate oxidase | chromosome | CDS | 2708442 | 1623 | + | 0.531731 |
| nadC | b0109 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 117752 | 894 | - | 0.53132 |
| nadD | b0639 | nicotinic acid mononucleotide adenyltransferase | chromosome | CDS | 669154 | 642 | - | 0.5 |
| nadE | b1740 | NAD synthetase | chromosome | CDS | 1820482 | 828 | + | 0.495169 |
| nadR | b4390 | nicotinamide-nucleotide adenylyltransferase | chromosome | CDS | 4625338 | 1233 | + | 0.509327 |
| nagA | b0677 | N-acetylglucosamine-6-phosphate deacetylase | chromosome | CDS | 700826 | 1149 | - | 0.517842 |
| nagB | b0678 | glucosamine-6-phosphate deaminase | chromosome | CDS | 702034 | 801 | - | 0.48814 |
| nagC | b0676 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine | chromosome | CDS | 699597 | 1221 | - | 0.529894 |
| nagD | b0675 | UMP phosphatase | chromosome | CDS | 698797 | 753 | - | 0.52988 |
| nagE | b0679 | fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components | chromosome | CDS | 703167 | 1947 | + | 0.547509 |
| nagK | b1119 | N-acetyl-D-glucosamine kinase | chromosome | CDS | 1177816 | 912 | + | 0.527412 |
| nagZ | b1107 | beta-hexosaminidase | chromosome | CDS | 1163318 | 1026 | + | 0.530214 |
| nanA | b3225 | N-acetylneuraminate lyase | chromosome | CDS | 3370705 | 894 | - | 0.520134 |
| nanE | b3223 | predicted N-acetylmannosamine-6-P epimerase | chromosome | CDS | 3368369 | 690 | - | 0.582609 |
| nanK | b3222 | N-acetylmannosamine kinase | chromosome | CDS | 3367497 | 876 | - | 0.584475 |
| nanR | b3226 | transcriptional regulator NanR | chromosome | CDS | 3371720 | 792 | - | 0.522727 |
| nanT | b3224 | sialic acid transporter | chromosome | CDS | 3369106 | 1491 | - | 0.550637 |
| napA | b2206 | nitrate reductase, periplasmic, large subunit | chromosome | CDS | 2298289 | 2487 | - | 0.561319 |
| napB | b2203 | nitrate reductase, small, cytochrome C550 subunit, periplasmic | chromosome | CDS | 2296291 | 450 | - | 0.555556 |
| napC | b2202 | nitrate reductase, cytochrome c-type, periplasmic | chromosome | CDS | 2295679 | 603 | - | 0.515755 |
| napD | b2207 | assembly protein for periplasmic nitrate reductase | chromosome | CDS | 2300772 | 264 | - | 0.545455 |
| napF | b2208 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) | chromosome | CDS | 2301025 | 495 | - | 0.553535 |
| napG | b2205 | quinol dehydrogenase periplasmic component | chromosome | CDS | 2297587 | 696 | - | 0.590517 |
| napH | b2204 | quinol dehydrogenase membrane component | chromosome | CDS | 2296737 | 864 | - | 0.559028 |
| narG | b1224 | nitrate reductase 1, alpha subunit | chromosome | CDS | 1279087 | 3744 | + | 0.549412 |
| narH | b1225 | nitrate reductase 1, beta (Fe-S) subunit | chromosome | CDS | 1282827 | 1539 | + | 0.537362 |
| narI | b1227 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit | chromosome | CDS | 1285072 | 678 | + | 0.558997 |
| narJ | b1226 | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 | chromosome | CDS | 1284362 | 711 | + | 0.563994 |
| narK | b1223 | nitrate/nitrite transporter | chromosome | CDS | 1277180 | 1392 | + | 0.536638 |
| narL | b1221 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) | chromosome | CDS | 1274402 | 651 | - | 0.517665 |
| narP | b2193 | DNA-binding response regulator in two-component regulatory system with NarQ or NarX | chromosome | CDS | 2288522 | 648 | + | 0.524691 |
| narQ | b2469 | sensory histidine kinase in two-component regulatory system with NarP (NarL) | chromosome | CDS | 2583753 | 1701 | + | 0.516167 |
| narU | b1469 | nitrate/nitrite transporter | chromosome | CDS | 1540696 | 1389 | - | 0.489561 |
| narV | b1465 | nitrate reductase 2 (NRZ), gamma subunit | chromosome | CDS | 1533961 | 681 | - | 0.527166 |
| narW | b1466 | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) | chromosome | CDS | 1534638 | 696 | - | 0.563218 |
| narX | b1222 | sensory histidine kinase in two-component regulatory system with NarL | chromosome | CDS | 1275045 | 1797 | - | 0.533667 |
| narY | b1467 | nitrate reductase 2 (NRZ), beta subunit | chromosome | CDS | 1535333 | 1545 | - | 0.543042 |
| narZ | b1468 | nitrate reductase 2 (NRZ), alpha subunit | chromosome | CDS | 1536874 | 3741 | - | 0.550388 |
| ndh | b1109 | respiratory NADH dehydrogenase 2/cupric reductase | chromosome | CDS | 1165308 | 1305 | + | 0.529502 |
| ndk | b2518 | nucleoside diphosphate kinase | chromosome | CDS | 2642455 | 432 | - | 0.523148 |
| nei | b0714 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase | chromosome | CDS | 745158 | 792 | + | 0.52399 |
| nemA | b1650 | N-ethylmaleimide reductase, FMN-linked | chromosome | CDS | 1724683 | 1098 | + | 0.534608 |
| nfi | b3998 | endonuclease V | chromosome | CDS | 4196813 | 672 | + | 0.587798 |
| nfnB | b0578 | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive | chromosome | CDS | 603994 | 654 | - | 0.51529 |
| nfo | b2159 | endonuclease IV | chromosome | CDS | 2248862 | 858 | + | 0.524476 |
| nfrA | b0568 | bacteriophage N4 receptor, outer membrane subunit | chromosome | CDS | 587205 | 2973 | - | 0.550622 |
| nfrB | b0569 | bacteriophage N4 receptor, inner membrane subunit | chromosome | CDS | 590164 | 2238 | - | 0.525022 |
| nfsA | b0851 | nitroreductase A, NADPH-dependent, FMN-dependent | chromosome | CDS | 890407 | 723 | + | 0.525588 |
| nhaA | b0019 | pH-dependent sodium/proton antiporter | chromosome | CDS | 17489 | 1167 | + | 0.514139 |
| nhaB | b1186 | sodium/proton antiporter | chromosome | CDS | 1232399 | 1542 | - | 0.528534 |
| nhaR | b0020 | DNA-binding transcriptional activator | chromosome | CDS | 18715 | 906 | + | 0.474614 |
| nhoA | b1463 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1532048 | 846 | + | 0.514184 |
| nikA | b3476 | nickel transporter subunit | chromosome | CDS | 3611690 | 1575 | + | 0.533333 |
| nikB | b3477 | nickel transporter subunit | chromosome | CDS | 3613264 | 945 | + | 0.584127 |
| nikC | b3478 | nickel transporter subunit | chromosome | CDS | 3614205 | 834 | + | 0.609113 |
| nikD | b3479 | nickel transporter subunit | chromosome | CDS | 3615038 | 765 | + | 0.592157 |
| nikE | b3480 | nickel transporter subunit | chromosome | CDS | 3615799 | 807 | + | 0.562577 |
| nikR | b3481 | nickel responsive regulator | chromosome | CDS | 3616611 | 402 | + | 0.572139 |
| ninE | b0548 | DLP12 prophage; conserved protein | chromosome | CDS | 572144 | 171 | + | 0.48538 |
| nirB | b3365 | nitrite reductase, large subunit, NAD(P)H-binding | chromosome | CDS | 3492033 | 2544 | + | 0.542846 |
| nirC | b3367 | nitrite transporter | chromosome | CDS | 3495025 | 807 | + | 0.548947 |
| nirD | b3366 | nitrite reductase small subunit | chromosome | CDS | 3494573 | 327 | + | 0.559633 |
| nlpA | b3661 | cytoplasmic membrane lipoprotein-28 | chromosome | CDS | 3837198 | 819 | - | 0.473748 |
| nlpB | b2477 | lipoprotein | chromosome | CDS | 2595853 | 1035 | - | 0.554589 |
| nlpC | b1708 | predicted lipoprotein | chromosome | CDS | 1790291 | 465 | - | 0.496774 |
| nlpD | b2742 | predicted outer membrane lipoprotein | chromosome | CDS | 2865636 | 1140 | - | 0.524561 |
| nlpE | b0192 | lipoprotein involved with copper homeostasis and adhesion | chromosome | CDS | 215269 | 711 | + | 0.523207 |
| nlpI | b3163 | hypothetical protein | chromosome | CDS | 3306062 | 885 | - | 0.482486 |
| nmpC | b0553 | DLP12 prophage; truncated outer membrane porin (pseudogene) | chromosome | CDS | 574981 | 1128 | - | 0.435284 |
| nohA | b1548 | Qin prophage; predicted packaging protein | chromosome | CDS | 1633822 | 570 | - | 0.536842 |
| nohB | b0560 | DLP12 prophage; DNA packaging protein | chromosome | CDS | 580057 | 546 | + | 0.525641 |
| norR | b2709 | anaerobic nitric oxide reductase transcription regulator | chromosome | CDS | 2828797 | 1515 | - | 0.568317 |
| norV | b2710 | anaerobic nitric oxide reductase flavorubredoxin | chromosome | CDS | 2830498 | 1440 | + | 0.533333 |
| norW | b2711 | nitric oxide reductase | chromosome | CDS | 2831934 | 1134 | + | 0.540564 |
| npr | b3206 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) | chromosome | CDS | 3345988 | 273 | + | 0.490842 |
| nrdA | b2234 | ribonucleotide-diphosphate reductase alpha subunit | chromosome | CDS | 2342887 | 2286 | + | 0.536745 |
| nrdB | b2235 | ribonucleotide-diphosphate reductase beta subunit | chromosome | CDS | 2345406 | 1131 | + | 0.505747 |
| nrdD | b4238 | anaerobic ribonucleoside triphosphate reductase | chromosome | CDS | 4458545 | 2139 | - | 0.535297 |
| nrdE | b2675 | ribonucleotide-diphosphate reductase alpha subunit | chromosome | CDS | 2799370 | 2145 | + | 0.518415 |
| nrdF | b2676 | ribonucleotide-diphosphate reductase beta subunit | chromosome | CDS | 2801524 | 960 | + | 0.482292 |
| nrdG | b4237 | anaerobic ribonucleotide reductase activating protein | chromosome | CDS | 4457923 | 465 | - | 0.509677 |
| nrdH | b2673 | glutaredoxin-like protein | chromosome | CDS | 2798745 | 246 | + | 0.53252 |
| nrdI | b2674 | hypothetical protein | chromosome | CDS | 2798987 | 411 | + | 0.559611 |
| nrfA | b4070 | nitrite reductase, formate-dependent, cytochrome | chromosome | CDS | 4285787 | 1437 | + | 0.522617 |
| nrfB | b4071 | nitrite reductase, formate-dependent, penta-heme cytochrome c | chromosome | CDS | 4287268 | 567 | + | 0.539683 |
| nrfC | b4072 | formate-dependent nitrite reductase, 4Fe4S subunit | chromosome | CDS | 4287831 | 672 | + | 0.578869 |
| nrfD | b4073 | formate-dependent nitrite reductase, membrane subunit | chromosome | CDS | 4288499 | 957 | + | 0.575758 |
| nrfE | b4074 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE | chromosome | CDS | 4289535 | 1659 | + | 0.573237 |
| nrfF | b4075 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF | chromosome | CDS | 4291186 | 384 | + | 0.523438 |
| nrfG | b4076 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG | chromosome | CDS | 4291566 | 597 | + | 0.517588 |
| nth | b1633 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) | chromosome | CDS | 1709547 | 636 | + | 0.492138 |
| nudB | b1865 | dATP pyrophosphohydrolase | chromosome | CDS | 1946204 | 453 | - | 0.525386 |
| nudC | b3996 | NADH pyrophosphatase | chromosome | CDS | 4194926 | 774 | + | 0.5323 |
| nudD | b2051 | GDP-mannose mannosyl hydrolase | chromosome | CDS | 2123767 | 480 | - | 0.545833 |
| nudE | b3397 | ADP-ribose diphosphatase | chromosome | CDS | 3523611 | 561 | - | 0.508021 |
| nudF | b3034 | ADP-ribose pyrophosphatase | chromosome | CDS | 3175303 | 630 | - | 0.507937 |
| nudG | b1759 | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase | chromosome | CDS | 1839514 | 408 | + | 0.54902 |
| nudH | b2830 | dinucleoside polyphosphate hydrolase | chromosome | CDS | 2966469 | 531 | - | 0.493409 |
| nuoA | b2288 | NADH dehydrogenase subunit A | chromosome | CDS | 2402651 | 444 | - | 0.533784 |
| nuoB | b2287 | NADH dehydrogenase subunit B | chromosome | CDS | 2401973 | 663 | - | 0.517345 |
| nuoC | b2286 | NADH:ubiquinone oxidoreductase, chain C,D | chromosome | CDS | 2400077 | 1803 | - | 0.557404 |
| nuoE | b2285 | NADH dehydrogenase subunit E | chromosome | CDS | 2399574 | 501 | - | 0.552894 |
| nuoF | b2284 | NADH:ubiquinone oxidoreductase, chain F | chromosome | CDS | 2398240 | 1338 | - | 0.562033 |
| nuoG | b2283 | NADH dehydrogenase subunit G | chromosome | CDS | 2395461 | 2733 | - | 0.563483 |
| nuoH | b2282 | NADH dehydrogenase subunit H | chromosome | CDS | 2394487 | 978 | - | 0.541922 |
| nuoI | b2281 | NADH dehydrogenase subunit I | chromosome | CDS | 2393930 | 543 | - | 0.543278 |
| nuoJ | b2280 | NADH dehydrogenase subunit J | chromosome | CDS | 2393364 | 555 | - | 0.538739 |
| nuoK | b2279 | NADH dehydrogenase subunit K | chromosome | CDS | 2393065 | 303 | - | 0.547855 |
| nuoL | b2278 | NADH dehydrogenase subunit L | chromosome | CDS | 2391227 | 1842 | - | 0.571661 |
| nuoM | b2277 | NADH dehydrogenase subunit M | chromosome | CDS | 2389534 | 1530 | - | 0.547059 |
| nuoN | b2276 | NADH dehydrogenase subunit N | chromosome | CDS | 2388070 | 1278 | - | 0.574335 |
| nupC | b2393 | nucleoside (except guanosine) transporter | chromosome | CDS | 2511064 | 1203 | + | 0.498753 |
| nupG | b2964 | nucleoside transporter | chromosome | CDS | 3103736 | 1257 | + | 0.497216 |
| nusA | b3169 | transcription elongation factor NusA | chromosome | CDS | 3314061 | 1488 | - | 0.527554 |
| nusB | b0416 | transcription antitermination protein NusB | chromosome | CDS | 434361 | 420 | + | 0.538095 |
| nusG | b3982 | transcription antitermination protein NusG | chromosome | CDS | 4175766 | 546 | + | 0.516484 |
| obgE | b3183 | GTPase involved in cell partioning and DNA repair | chromosome | CDS | 3328604 | 1173 | - | 0.531969 |
| ogrK | b2082 | DNA-binding transcriptional regulator prophage P2 remnant | chromosome | CDS | 2165326 | 219 | - | 0.506849 |
| ogt | b1335 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase | chromosome | CDS | 1397745 | 516 | - | 0.531008 |
| ompA | b0957 | outer membrane protein A (3a;II*;G;d) | chromosome | CDS | 1018236 | 1041 | - | 0.537944 |
| ompC | b2215 | outer membrane porin protein C | chromosome | CDS | 2309668 | 1104 | - | 0.506341 |
| ompF | b0929 | outer membrane porin 1a (Ia;b;F) | chromosome | CDS | 985117 | 1089 | - | 0.477502 |
| ompG | b1319 | outer membrane porin | chromosome | CDS | 1379971 | 906 | + | 0.498896 |
| ompL | b3875 | predicted outer membrane porin L | chromosome | CDS | 4061626 | 693 | - | 0.408369 |
| ompN | b1377 | outer membrane pore protein N, non-specific | chromosome | CDS | 1433784 | 1134 | - | 0.46649 |
| ompR | b3405 | osmolarity response regulator | chromosome | CDS | 3533887 | 720 | - | 0.551389 |
| ompT | b0565 | DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) | chromosome | CDS | 583903 | 954 | - | 0.433962 |
| ompW | b1256 | outer membrane protein W | chromosome | CDS | 1312044 | 639 | + | 0.500782 |
| ompX | b0814 | outer membrane protein X | chromosome | CDS | 849673 | 516 | + | 0.513566 |
| oppA | b1243 | oligopeptide transporter subunit | chromosome | CDS | 1299206 | 1632 | + | 0.477328 |
| oppB | b1244 | oligopeptide permease ABC transporter membrane protein | chromosome | CDS | 1300923 | 921 | + | 0.457112 |
| oppC | b1245 | oligopeptide transporter subunit | chromosome | CDS | 1301858 | 909 | + | 0.523652 |
| oppD | b1246 | oligopeptide transporter ATP-binding component | chromosome | CDS | 1302778 | 1014 | + | 0.517751 |
| oppF | b1247 | oligopeptide transporter subunit | chromosome | CDS | 1303788 | 1005 | + | 0.515423 |
| orn | b4162 | oligoribonuclease | chromosome | CDS | 4389627 | 546 | + | 0.540293 |
| osmB | b1283 | lipoprotein | chromosome | CDS | 1341134 | 219 | - | 0.520548 |
| osmC | b1482 | osmotically inducible, stress-inducible membrane protein | chromosome | CDS | 1554649 | 432 | + | 0.5 |
| osmE | b1739 | DNA-binding transcriptional activator | chromosome | CDS | 1819942 | 339 | - | 0.495575 |
| osmY | b4376 | periplasmic protein | chromosome | CDS | 4609419 | 606 | + | 0.516502 |
| otsA | b1896 | trehalose-6-phosphate synthase | chromosome | CDS | 1978212 | 1425 | - | 0.49193 |
| otsB | b1897 | trehalose-6-phosphate phosphatase, biosynthetic | chromosome | CDS | 1979611 | 801 | - | 0.505618 |
| oxc | b2373 | hypothetical protein | chromosome | CDS | 2488278 | 1695 | - | 0.466077 |
| oxyR | b3961 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4156513 | 918 | + | 0.554466 |
| oxyS | b4458 | global regulatory RNA | chromosome | misc_RNA | 4156308 | 110 | - | 0.490909 |
| paaA | b1388 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1451951 | 930 | + | 0.521505 |
| paaB | b1389 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1452892 | 288 | + | 0.496528 |
| paaC | b1390 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1453188 | 747 | + | 0.53012 |
| paaD | b1391 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1453949 | 498 | + | 0.558233 |
| paaE | b1392 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1454454 | 1071 | + | 0.533147 |
| paaF | b1393 | enoyl-CoA hydratase-isomerase | chromosome | CDS | 1455521 | 768 | + | 0.545573 |
| paaG | b1394 | enoyl-CoA hydratase | chromosome | CDS | 1456288 | 789 | + | 0.544994 |
| paaH | b1395 | 3-hydroxybutyryl-CoA dehydrogenase | chromosome | CDS | 1457078 | 1428 | + | 0.532213 |
| paaI | b1396 | predicted thioesterase | chromosome | CDS | 1458495 | 423 | + | 0.515366 |
| paaJ | b1397 | acetyl-CoA acetyltransferase | chromosome | CDS | 1458917 | 1206 | + | 0.559702 |
| paaK | b1398 | phenylacetyl-CoA ligase | chromosome | CDS | 1460149 | 1314 | + | 0.518265 |
| paaX | b1399 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive | chromosome | CDS | 1461563 | 951 | + | 0.50368 |
| paaY | b1400 | predicted hexapeptide repeat acetyltransferase | chromosome | CDS | 1462495 | 591 | + | 0.505922 |
| pabA | b3360 | para-aminobenzoate synthase component II | chromosome | CDS | 3488288 | 564 | - | 0.533688 |
| pabB | b1812 | para-aminobenzoate synthase component I | chromosome | CDS | 1892829 | 1362 | + | 0.509545 |
| pabC | b1096 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1152523 | 810 | + | 0.506173 |
| pal | b0741 | peptidoglycan-associated outer membrane lipoprotein | chromosome | CDS | 778290 | 522 | + | 0.51341 |
| panB | b0134 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 148807 | 795 | - | 0.545912 |
| panC | b0133 | pantoate--beta-alanine ligase | chromosome | CDS | 147944 | 852 | - | 0.526995 |
| panD | b0131 | aspartate 1-decarboxylase precursor | chromosome | CDS | 146314 | 381 | - | 0.524934 |
| panE | b0425 | 2-dehydropantoate 2-reductase | chromosome | CDS | 442828 | 912 | - | 0.51864 |
| panF | b3258 | sodium/panthothenate symporter | chromosome | CDS | 3405629 | 1452 | + | 0.543388 |
| parC | b3019 | DNA topoisomerase IV subunit A | chromosome | CDS | 3161737 | 2259 | - | 0.546702 |
| parE | b3030 | DNA topoisomerase IV subunit B | chromosome | CDS | 3171526 | 1893 | - | 0.535658 |
| pbl | b2854 | predicted peptidoglycan-binding enzyme (pseudogene) | chromosome | CDS | 2992063 | 375 | + | 0.333333 |
| pbpC | b2519 | fused transglycosylase/transpeptidase | chromosome | CDS | 2643035 | 2313 | - | 0.567229 |
| pbpG | b2134 | D-alanyl-D-alanine endopeptidase | chromosome | CDS | 2221960 | 933 | - | 0.506967 |
| pck | b3403 | phosphoenolpyruvate carboxykinase | chromosome | CDS | 3530840 | 1623 | + | 0.536044 |
| pcm | b2743 | protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 2866915 | 627 | - | 0.53429 |
| pcnB | b0143 | poly(A) polymerase I | chromosome | CDS | 157729 | 1398 | - | 0.558655 |
| pdhR | b0113 | transcriptional regulator of pyruvate dehydrogenase complex | chromosome | CDS | 122092 | 765 | + | 0.55817 |
| pdxA | b0052 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 52427 | 990 | - | 0.563636 |
| pdxB | b2320 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 2434737 | 1137 | - | 0.530343 |
| pdxH | b1638 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 1715375 | 657 | - | 0.519026 |
| pdxJ | b2564 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 2699020 | 732 | - | 0.564208 |
| pdxK | b2418 | pyridoxine kinase | chromosome | CDS | 2534408 | 852 | - | 0.5223 |
| pdxY | b1636 | pyridoxine kinase | chromosome | CDS | 1713050 | 864 | - | 0.530093 |
| pepA | b4260 | leucyl aminopeptidase | chromosome | CDS | 4482463 | 1512 | - | 0.55291 |
| pepB | b2523 | aminopeptidase B | chromosome | CDS | 2653097 | 1284 | - | 0.568536 |
| pepD | b0237 | aminoacyl-histidine dipeptidase (peptidase D) | chromosome | CDS | 254259 | 1458 | - | 0.513717 |
| pepE | b4021 | peptidase E | chromosome | CDS | 4227476 | 690 | - | 0.543478 |
| pepN | b0932 | aminopeptidase N | chromosome | CDS | 989845 | 2613 | + | 0.534635 |
| pepP | b2908 | proline aminopeptidase P II | chromosome | CDS | 3051537 | 1326 | - | 0.535445 |
| pepQ | b3847 | proline dipeptidase | chromosome | CDS | 4029184 | 1332 | + | 0.536787 |
| pepT | b1127 | peptidase T | chromosome | CDS | 1185067 | 1227 | + | 0.498778 |
| perR | b0254 | CP4-6 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 268513 | 894 | - | 0.479866 |
| pfkA | b3916 | 6-phosphofructokinase | chromosome | CDS | 4105575 | 963 | + | 0.534787 |
| pfkB | b1723 | 6-phosphofructokinase II | chromosome | CDS | 1804394 | 930 | + | 0.54086 |
| pflA | b0902 | pyruvate formate lyase activating enzyme 1 | chromosome | CDS | 949563 | 741 | - | 0.503374 |
| pflB | b0903 | pyruvate formate lyase I | chromosome | CDS | 950495 | 2283 | - | 0.512046 |
| pflC | b3952 | pyruvate formate lyase II activase | chromosome | CDS | 4144281 | 879 | + | 0.549488 |
| pflD | b3951 | predicted formate acetyltransferase 2 (pyruvate formate lyase II) | chromosome | CDS | 4142018 | 2298 | + | 0.531332 |
| pgi | b4025 | glucose-6-phosphate isomerase | chromosome | CDS | 4231781 | 1650 | + | 0.513333 |
| pgk | b2926 | phosphoglycerate kinase | chromosome | CDS | 3069481 | 1164 | - | 0.523196 |
| pgm | b0688 | phosphoglucomutase | chromosome | CDS | 712781 | 1641 | + | 0.552712 |
| pgpA | b0418 | phosphatidylglycerophosphatase A | chromosome | CDS | 435813 | 519 | + | 0.531792 |
| pgpB | b1278 | phosphatidylglycerophosphatase B | chromosome | CDS | 1337354 | 765 | + | 0.505882 |
| pgsA | b1912 | phosphatidylglycerophosphate synthetase | chromosome | CDS | 1990293 | 549 | - | 0.52459 |
| pheA | b2599 | fused chorismate mutase P/prephenate dehydratase | chromosome | CDS | 2735767 | 1161 | + | 0.491817 |
| pheL | b2598 | pheA gene leader peptide | chromosome | CDS | 2735621 | 48 | + | 0.375 |
| pheM | b1715 | phenylalanyl-tRNA synthetase operon leader peptide | chromosome | CDS | 1797250 | 45 | - | 0.355556 |
| pheP | b0576 | phenylalanine transporter | chromosome | CDS | 601182 | 1377 | + | 0.525054 |
| pheS | b1714 | phenylalanyl-tRNA synthetase alpha subunit | chromosome | CDS | 1795983 | 984 | - | 0.538618 |
| pheT | b1713 | phenylalanyl-tRNA synthetase beta subunit | chromosome | CDS | 1793581 | 2388 | - | 0.543551 |
| pheU | b4134 | tRNA-Phe | chromosome | tRNA | 4360574 | 76 | - | 0.592105 |
| pheV | b2967 | tRNA-Phe | chromosome | tRNA | 3108388 | 76 | + | 0.592105 |
| phnA | b4108 | hypothetical protein | chromosome | CDS | 4324422 | 336 | - | 0.464286 |
| phnB | b4107 | hypothetical protein | chromosome | CDS | 4323321 | 444 | - | 0.515766 |
| phnC | b4106 | phosphonate/organophosphate ester transporter subunit | chromosome | CDS | 4322400 | 789 | - | 0.585551 |
| phnD | b4105 | phosphonate/organophosphate ester transporter subunit | chromosome | CDS | 4321359 | 1017 | - | 0.554572 |
| phnE_1 | b4104 | phosphonate/organophosphate ester transporter subunit | chromosome | CDS | 4320684 | 621 | - | 0.634461 |
| phnE_2 | b4103 | phosphonate/organophosphate ester transporter (pseudogene) | chromosome | CDS | 4320466 | 369 | - | 0.601626 |
| phnF | b4102 | predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation | chromosome | CDS | 4319720 | 726 | - | 0.618457 |
| phnG | b4101 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4319267 | 453 | - | 0.626932 |
| phnH | b4100 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4318686 | 585 | - | 0.608547 |
| phnI | b4099 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4317622 | 1065 | - | 0.626291 |
| phnJ | b4098 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4316784 | 846 | - | 0.582742 |
| phnK | b4097 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4316029 | 759 | - | 0.613966 |
| phnL | b4096 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4315238 | 681 | - | 0.602056 |
| phnM | b4095 | carbon-phosphorus lyase complex subunit | chromosome | CDS | 4314105 | 1137 | - | 0.613017 |
| phnN | b4094 | ribose 1,5-bisphosphokinase | chromosome | CDS | 4313548 | 558 | - | 0.602151 |
| phnO | b4093 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 4313127 | 435 | - | 0.57931 |
| phnP | b4092 | carbon-phosphorus lyase complex accessory protein | chromosome | CDS | 4312367 | 759 | - | 0.592885 |
| phoA | b0383 | bacterial alkaline phosphatase | chromosome | CDS | 400971 | 1416 | + | 0.533898 |
| phoB | b0399 | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) | chromosome | CDS | 416366 | 690 | + | 0.544928 |
| phoE | b0241 | outer membrane phosphoporin protein E | chromosome | CDS | 258269 | 1056 | - | 0.44697 |
| phoH | b1020 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1084215 | 1065 | + | 0.522066 |
| phoP | b1130 | DNA-binding response regulator in two-component regulatory system with PhoQ | chromosome | CDS | 1188999 | 672 | - | 0.477679 |
| phoQ | b1129 | sensory histidine kinase in two-compoent regulatory system with PhoP | chromosome | CDS | 1187539 | 1461 | - | 0.513347 |
| phoR | b0400 | sensory histidine kinase in two-component regulatory system with PhoB | chromosome | CDS | 417113 | 1296 | + | 0.530093 |
| phoU | b3724 | negative regulator of PhoR/PhoB two-component regulator | chromosome | CDS | 3904876 | 726 | - | 0.526171 |
| php | b3379 | predicted hydrolase | chromosome | CDS | 3505734 | 879 | - | 0.530148 |
| phr | b0708 | deoxyribodipyrimidine photolyase, FAD-binding | chromosome | CDS | 738730 | 1419 | + | 0.534884 |
| pin | b1158 | e14 prophage; site-specific DNA recombinase | chromosome | CDS | 1208908 | 555 | + | 0.488288 |
| pinH | b2648 | predicted invertase fragment (pseudogene) | chromosome | CDS | 2781087 | 144 | - | 0.451389 |
| pinQ | b1545 | Qin prophage; predicted site-specific recombinase | chromosome | CDS | 1631646 | 591 | + | 0.448393 |
| pinR | b1374 | Rac prophage; predicted site-specific recombinase | chromosome | CDS | 1431108 | 591 | - | 0.446701 |
| pioO | b3322 | part of gsp divergon involved in type II protein secretion | chromosome | CDS | 3451530 | 420 | - | 0.459524 |
| pitA | b3493 | phosphate transporter, low-affinity | chromosome | CDS | 3635665 | 1500 | + | 0.540667 |
| pitB | b2987 | phosphate transporter | chromosome | CDS | 3132894 | 1500 | - | 0.519333 |
| pldA | b3821 | outer membrane phospholipase A | chromosome | CDS | 4002885 | 870 | + | 0.512644 |
| pldB | b3825 | lysophospholipase L(2) | chromosome | CDS | 4007193 | 1023 | + | 0.537634 |
| plsB | b4041 | glycerol-3-phosphate acyltransferase | chromosome | CDS | 4252066 | 2424 | - | 0.551568 |
| plsC | b3018 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | chromosome | CDS | 3160766 | 738 | - | 0.49458 |
| plsX | b1090 | fatty acid/phospholipid synthesis protein | chromosome | CDS | 1146844 | 1071 | + | 0.521008 |
| pmbA | b4235 | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 | chromosome | CDS | 4455982 | 1353 | + | 0.542498 |
| pmrD | b2259 | polymyxin resistance protein B | chromosome | CDS | 2371294 | 267 | - | 0.468165 |
| pncA | b1768 | nicotinamidase/pyrazinamidase | chromosome | CDS | 1849911 | 642 | + | 0.531153 |
| pncB | b0931 | nicotinate phosphoribosyltransferase | chromosome | CDS | 988377 | 1203 | - | 0.512053 |
| pnp | b3164 | polynucleotide phosphorylase/polyadenylase | chromosome | CDS | 3307055 | 2205 | - | 0.536961 |
| pntA | b1603 | NAD(P) transhydrogenase subunit alpha | chromosome | CDS | 1674395 | 1533 | - | 0.524462 |
| pntB | b1602 | pyridine nucleotide transhydrogenase | chromosome | CDS | 1672996 | 1389 | - | 0.526278 |
| pnuC | b0751 | predicted nicotinamide mononucleotide transporter | chromosome | CDS | 782389 | 720 | + | 0.481944 |
| polA | b3863 | DNA polymerase I | chromosome | CDS | 4044989 | 2787 | + | 0.519555 |
| polB | b0060 | DNA polymerase II | chromosome | CDS | 63429 | 2352 | - | 0.553571 |
| potA | b1126 | putrescine/spermidine ABC transporter ATPase protein | chromosome | CDS | 1183681 | 1137 | - | 0.508355 |
| potB | b1125 | spermidine/putrescine ABC transporter membrane protein | chromosome | CDS | 1182840 | 828 | - | 0.508454 |
| potC | b1124 | spermidine/putrescine ABC transporter membrane protein | chromosome | CDS | 1182049 | 795 | - | 0.501887 |
| potD | b1123 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein | chromosome | CDS | 1181006 | 1047 | - | 0.508118 |
| potE | b0692 | putrescine/proton symporter: putrescine/ornithine antiporter | chromosome | CDS | 716169 | 1320 | - | 0.506061 |
| potF | b0854 | putrescine transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 893007 | 1113 | + | 0.508536 |
| potG | b0855 | putrescine transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 894214 | 1134 | + | 0.552028 |
| potH | b0856 | putrescine transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 895357 | 954 | + | 0.509434 |
| potI | b0857 | putrescine transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 896307 | 846 | + | 0.547281 |
| poxA | b4155 | lysyl-tRNA synthetase | chromosome | CDS | 4380666 | 978 | + | 0.526585 |
| poxB | b0871 | pyruvate dehydrogenase | chromosome | CDS | 908554 | 1719 | - | 0.54043 |
| ppa | b4226 | inorganic pyrophosphatase | chromosome | CDS | 4447145 | 531 | - | 0.512241 |
| ppc | b3956 | phosphoenolpyruvate carboxylase | chromosome | CDS | 4148470 | 2652 | - | 0.556561 |
| ppdA | b2826 | hypothetical protein | chromosome | CDS | 2961729 | 471 | - | 0.541401 |
| ppdB | b2825 | hypothetical protein | chromosome | CDS | 2961175 | 564 | - | 0.52305 |
| ppdC | b2823 | hypothetical protein | chromosome | CDS | 2960463 | 324 | - | 0.549383 |
| ppdD | b0108 | predicted major pilin subunit | chromosome | CDS | 117109 | 441 | - | 0.530612 |
| pphA | b1838 | serine/threonine-specific protein phosphatase 1 | chromosome | CDS | 1920337 | 657 | - | 0.47793 |
| pphB | b2734 | serine/threonine-specific protein phosphatase 2 | chromosome | CDS | 2857782 | 657 | + | 0.423135 |
| ppiA | b3363 | peptidyl-prolyl cis-trans isomerase A (rotamase A) | chromosome | CDS | 3489747 | 573 | - | 0.511344 |
| ppiB | b0525 | peptidyl-prolyl cis-trans isomerase B (rotamase B) | chromosome | CDS | 553166 | 495 | - | 0.478788 |
| ppiC | b3775 | peptidyl-prolyl cis-trans isomerase C (rotamase C) | chromosome | CDS | 3957555 | 282 | - | 0.51773 |
| ppiD | b0441 | peptidyl-prolyl cis-trans isomerase (rotamase D) | chromosome | CDS | 461139 | 1872 | + | 0.523504 |
| ppk | b2501 | polyphosphate kinase | chromosome | CDS | 2621066 | 2067 | + | 0.488631 |
| pppA | b2972 | bifunctional prepilin leader peptidase/ methylase | chromosome | CDS | 3111565 | 810 | - | 0.517284 |
| pps | b1702 | phosphoenolpyruvate synthase | chromosome | CDS | 1782758 | 2379 | - | 0.546448 |
| ppx | b2502 | exopolyphosphatase | chromosome | CDS | 2623137 | 1542 | + | 0.511673 |
| pqiA | b0950 | paraquat-inducible membrane protein A | chromosome | CDS | 1011224 | 1254 | + | 0.522329 |
| pqiB | b0951 | paraquat-inducible protein B | chromosome | CDS | 1012482 | 1641 | + | 0.502133 |
| pqqL | b1494 | predicted peptidase | chromosome | CDS | 1570431 | 2796 | - | 0.466381 |
| prc | b1830 | carboxy-terminal protease for penicillin-binding protein 3 | chromosome | CDS | 1910792 | 2049 | - | 0.50366 |
| prfA | b1211 | peptide chain release factor 1 | chromosome | CDS | 1264235 | 1083 | + | 0.530009 |
| prfB | b2891 | peptide chain release factor 2 | chromosome | CDS | 3033206 | 1098 | - | 0.535519 |
| prfC | b4375 | peptide chain release factor 3 | chromosome | CDS | 4607437 | 1590 | + | 0.540252 |
| prfH | b0236 | peptide chain release factor 2 | chromosome | CDS | 253702 | 501 | + | 0.542914 |
| priA | b3935 | primosome assembly protein PriA | chromosome | CDS | 4122635 | 2199 | - | 0.574807 |
| priB | b4201 | primosomal replication protein N | chromosome | CDS | 4423543 | 315 | + | 0.52381 |
| priC | b0467 | primosomal replication protein N'' | chromosome | CDS | 489509 | 528 | - | 0.589015 |
| prkB | b3355 | predicted phosphoribulokinase | chromosome | CDS | 3482512 | 870 | + | 0.532184 |
| prlC | b3498 | oligopeptidase A | chromosome | CDS | 3641163 | 2043 | - | 0.547234 |
| prmA | b3259 | ribosomal protein L11 methyltransferase | chromosome | CDS | 3407092 | 882 | + | 0.543084 |
| prmB | b2330 | N5-glutamine methyltransferase | chromosome | CDS | 2445530 | 933 | - | 0.525188 |
| prmC | b1212 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1265317 | 834 | + | 0.551559 |
| proA | b0243 | gamma-glutamyl phosphate reductase | chromosome | CDS | 260727 | 1254 | + | 0.543062 |
| proB | b0242 | gamma-glutamyl kinase | chromosome | CDS | 259612 | 1104 | + | 0.5625 |
| proC | b0386 | pyrroline-5-carboxylate reductase | chromosome | CDS | 404059 | 810 | - | 0.545679 |
| proK | b3545 | tRNA-Pro | chromosome | tRNA | 3706639 | 77 | - | 0.61039 |
| proL | b2189 | tRNA-Pro | chromosome | tRNA | 2284233 | 77 | + | 0.662338 |
| proM | b3799 | tRNA-Pro | chromosome | tRNA | 3980758 | 77 | + | 0.623377 |
| proP | b4111 | proline/glycine betaine transporter | chromosome | CDS | 4328525 | 1503 | + | 0.504325 |
| proQ | b1831 | putative solute/DNA competence effector | chromosome | CDS | 1912860 | 699 | - | 0.529328 |
| proS | b0194 | prolyl-tRNA synthetase | chromosome | CDS | 217057 | 1719 | - | 0.545084 |
| proV | b2677 | glycine betaine transporter subunit | chromosome | CDS | 2802837 | 1203 | + | 0.490441 |
| proW | b2678 | glycine betaine transporter subunit | chromosome | CDS | 2804032 | 1065 | + | 0.581221 |
| proX | b2679 | glycine betaine transporter subunit | chromosome | CDS | 2805154 | 993 | + | 0.52568 |
| proY | b0402 | predicted cryptic proline transporter | chromosome | CDS | 420210 | 1374 | + | 0.529112 |
| prpB | b0331 | 2-methylisocitrate lyase | chromosome | CDS | 347906 | 891 | + | 0.561167 |
| prpC | b0333 | 2-methylcitrate synthase | chromosome | CDS | 349236 | 1170 | + | 0.55641 |
| prpD | b0334 | 2-methylcitrate dehydratase | chromosome | CDS | 350439 | 1452 | + | 0.569559 |
| prpE | b0335 | predicted propionyl-CoA synthetase with ATPase domain | chromosome | CDS | 351930 | 1887 | + | 0.583996 |
| prpR | b0330 | DNA-binding transcriptional activator | chromosome | CDS | 346081 | 1587 | - | 0.551985 |
| prsA | b1207 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 1260151 | 948 | - | 0.525316 |
| psd | b4160 | phosphatidylserine decarboxylase | chromosome | CDS | 4387415 | 969 | - | 0.534572 |
| psiF | b0384 | hypothetical protein | chromosome | CDS | 402505 | 321 | + | 0.476636 |
| pspA | b1304 | regulatory protein for phage-shock-protein operon | chromosome | CDS | 1366103 | 669 | + | 0.493274 |
| pspB | b1305 | phage shock protein B | chromosome | CDS | 1366825 | 225 | + | 0.475556 |
| pspC | b1306 | DNA-binding transcriptional activator | chromosome | CDS | 1367049 | 360 | + | 0.502778 |
| pspD | b1307 | peripheral inner membrane phage-shock protein | chromosome | CDS | 1367417 | 222 | + | 0.545045 |
| pspE | b1308 | thiosulfate:cyanide sulfurtransferase (rhodanese) | chromosome | CDS | 1367713 | 315 | + | 0.507937 |
| pspF | b1303 | DNA-binding transcriptional activator | chromosome | CDS | 1364959 | 978 | - | 0.517382 |
| pssA | b2585 | phosphatidylserine synthase | chromosome | CDS | 2720749 | 1356 | + | 0.488938 |
| pstA | b3726 | phosphate transporter subunit | chromosome | CDS | 3906572 | 891 | - | 0.56229 |
| pstB | b3725 | phosphate transporter subunit | chromosome | CDS | 3905616 | 774 | - | 0.523256 |
| pstC | b3727 | phosphate transporter subunit | chromosome | CDS | 3907462 | 960 | - | 0.546875 |
| pstS | b3728 | phosphate transporter subunit | chromosome | CDS | 3908508 | 1041 | - | 0.51489 |
| pta | b2297 | phosphate acetyltransferase | chromosome | CDS | 2412769 | 2145 | + | 0.555245 |
| pth | b1204 | peptidyl-tRNA hydrolase | chromosome | CDS | 1257152 | 585 | - | 0.497436 |
| ptr | b2821 | protease III | chromosome | CDS | 2954018 | 2889 | - | 0.511596 |
| ptrB | b1845 | protease II | chromosome | CDS | 1924803 | 2061 | - | 0.498302 |
| ptsA | b3947 | fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component | chromosome | CDS | 4137743 | 2502 | - | 0.553557 |
| ptsG | b1101 | fused glucose-specific PTS enzymes: IIB component/IIC component | chromosome | CDS | 1157092 | 1434 | + | 0.526499 |
| ptsH | b2415 | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) | chromosome | CDS | 2531786 | 258 | + | 0.507752 |
| ptsI | b2416 | PEP-protein phosphotransferase of PTS system (enzyme I) | chromosome | CDS | 2532088 | 1728 | + | 0.496528 |
| ptsN | b3204 | sugar-specific enzyme IIA component of PTS | chromosome | CDS | 3344600 | 492 | + | 0.522358 |
| ptsP | b2829 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein | chromosome | CDS | 2964210 | 2247 | - | 0.538941 |
| purA | b4177 | adenylosuccinate synthetase | chromosome | CDS | 4402710 | 1299 | + | 0.538876 |
| purB | b1131 | adenylosuccinate lyase | chromosome | CDS | 1189839 | 1371 | - | 0.522976 |
| purC | b2476 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | chromosome | CDS | 2594927 | 714 | - | 0.522409 |
| purD | b4005 | phosphoribosylamine--glycine ligase | chromosome | CDS | 4202665 | 1290 | - | 0.582171 |
| purE | b0523 | phosphoribosylaminoimidazole carboxylase catalytic subunit | chromosome | CDS | 551814 | 510 | - | 0.590196 |
| purF | b2312 | amidophosphoribosyltransferase | chromosome | CDS | 2426743 | 1518 | - | 0.528986 |
| purH | b4006 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | chromosome | CDS | 4203966 | 1590 | - | 0.562893 |
| purK | b0522 | phosphoribosylaminoimidazole carboxylase | chromosome | CDS | 550750 | 1068 | - | 0.564607 |
| purL | b2557 | phosphoribosylformylglycinamidine synthase | chromosome | CDS | 2689678 | 3888 | - | 0.56893 |
| purM | b2499 | phosphoribosylaminoimidazole synthetase | chromosome | CDS | 2619219 | 1038 | + | 0.528902 |
| purN | b2500 | phosphoribosylglycinamide formyltransferase | chromosome | CDS | 2620256 | 639 | + | 0.536776 |
| purR | b1658 | DNA-binding transcriptional repressor, hypoxanthine-binding | chromosome | CDS | 1735868 | 1026 | + | 0.538012 |
| purT | b1849 | phosphoribosylglycinamide formyltransferase 2 | chromosome | CDS | 1928905 | 1179 | + | 0.537744 |
| purU | b1232 | formyltetrahydrofolate deformylase | chromosome | CDS | 1287005 | 843 | - | 0.472123 |
| putA | b1014 | fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | chromosome | CDS | 1074143 | 3963 | - | 0.56977 |
| putP | b1015 | proline:sodium symporter | chromosome | CDS | 1078528 | 1509 | + | 0.536779 |
| puuA | b1297 | gamma-Glu-putrescine synthase | chromosome | CDS | 1357514 | 1419 | - | 0.534884 |
| puuB | b1301 | gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding | chromosome | CDS | 1362256 | 1281 | + | 0.582358 |
| puuC | b1300 | gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent | chromosome | CDS | 1360767 | 1488 | + | 0.573253 |
| puuD | b1298 | gamma-Glu-GABA hydrolase | chromosome | CDS | 1359144 | 765 | + | 0.522876 |
| puuE | b1302 | GABA aminotransferase, PLP-dependent | chromosome | CDS | 1363574 | 1266 | + | 0.576619 |
| puuP | b1296 | putrescine importer | chromosome | CDS | 1355826 | 1386 | - | 0.533189 |
| puuR | b1299 | DNA-binding transcriptional repressor | chromosome | CDS | 1359935 | 558 | + | 0.508961 |
| pykA | b1854 | pyruvate kinase | chromosome | CDS | 1935673 | 1443 | + | 0.528067 |
| pykF | b1676 | pyruvate kinase | chromosome | CDS | 1753722 | 1413 | + | 0.498938 |
| pyrB | b4245 | aspartate carbamoyltransferase catalytic subunit | chromosome | CDS | 4469483 | 936 | - | 0.537393 |
| pyrC | b1062 | dihydroorotase | chromosome | CDS | 1120784 | 1047 | - | 0.531041 |
| pyrD | b0945 | dihydroorotate dehydrogenase | chromosome | CDS | 1003991 | 1011 | + | 0.469832 |
| pyrE | b3642 | orotate phosphoribosyltransferase | chromosome | CDS | 3813150 | 642 | - | 0.531153 |
| pyrF | b1281 | orotidine 5'-phosphate decarboxylase | chromosome | CDS | 1339945 | 738 | + | 0.52981 |
| pyrG | b2780 | CTP synthetase | chromosome | CDS | 2906051 | 1638 | - | 0.518926 |
| pyrH | b0171 | uridylate kinase | chromosome | CDS | 191855 | 726 | + | 0.527548 |
| pyrI | b4244 | aspartate carbamoyltransferase regulatory subunit | chromosome | CDS | 4469009 | 462 | - | 0.484848 |
| pyrL | b4246 | pyrBI operon leader peptide | chromosome | CDS | 4470422 | 135 | - | 0.503704 |
| qor | b4051 | quinone oxidoreductase, NADPH-dependent | chromosome | CDS | 4261271 | 984 | - | 0.530488 |
| qseB | b3025 | DNA-binding response regulator in two-component regulatory system with QseC | chromosome | CDS | 3167850 | 660 | + | 0.516667 |
| qseC | b3026 | sensory histidine kinase in two-component regulatory system with QseB | chromosome | CDS | 3168506 | 1350 | + | 0.53037 |
| queA | b0405 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | chromosome | CDS | 424235 | 1071 | + | 0.54155 |
| racC | b1351 | Rac prophage; predicted protein | chromosome | CDS | 1415512 | 276 | - | 0.391304 |
| racR | b1356 | Rac prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1417789 | 477 | - | 0.419287 |
| radA | b4389 | predicted repair protein | chromosome | CDS | 4623935 | 1383 | + | 0.577007 |
| rarA | b1009 | predicted hydrolase | chromosome | CDS | 1070188 | 801 | - | 0.579276 |
| rarD | b3819 | predicted chloramphenical resistance permease | chromosome | CDS | 4001311 | 891 | - | 0.506173 |
| rbbA | b3486 | fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein | chromosome | CDS | 3624826 | 2736 | - | 0.567251 |
| rbfA | b3167 | ribosome-binding factor A | chromosome | CDS | 3310799 | 402 | - | 0.529851 |
| rbn | b3886 | ribonuclease BN | chromosome | CDS | 4074169 | 873 | + | 0.508591 |
| rbsA | b3749 | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 3931801 | 1506 | + | 0.511952 |
| rbsB | b3751 | D-ribose transporter subunit | chromosome | CDS | 3934301 | 891 | + | 0.52862 |
| rbsC | b3750 | ribose ABC transporter permease protein | chromosome | CDS | 3933311 | 966 | + | 0.534162 |
| rbsD | b3748 | predicted cytoplasmic sugar-binding protein | chromosome | CDS | 3931374 | 420 | + | 0.47619 |
| rbsK | b3752 | ribokinase | chromosome | CDS | 3935317 | 930 | + | 0.519355 |
| rbsR | b3753 | DNA-binding transcriptional repressor of ribose metabolism | chromosome | CDS | 3936250 | 993 | + | 0.506546 |
| rcsA | b1951 | DNA-binding transcriptional activator, co-regulator with RcsB | chromosome | CDS | 2021992 | 624 | + | 0.38141 |
| rcsB | b2217 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN | chromosome | CDS | 2314199 | 651 | + | 0.477727 |
| rcsC | b2218 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN | chromosome | CDS | 2315049 | 2802 | - | 0.509993 |
| rcsD | b2216 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC | chromosome | CDS | 2311510 | 2673 | + | 0.493827 |
| rcsF | b0196 | predicted outer membrane protein, signal | chromosome | CDS | 219591 | 405 | - | 0.533333 |
| rdgC | b0393 | recombination associated protein | chromosome | CDS | 408332 | 912 | - | 0.515351 |
| rdlA | b4420 | regulatory antisense RNA | chromosome | misc_RNA | 1268546 | 67 | + | 0.522388 |
| rdlB | b4422 | regulatory antisense sRNA | chromosome | misc_RNA | 1269081 | 66 | + | 0.5 |
| rdlC | b4424 | regulatory antisense sRNA | chromosome | misc_RNA | 1269616 | 68 | + | 0.485294 |
| rdlD | b4454 | regulatory antisense sRNA | chromosome | misc_RNA | 3698159 | 64 | + | 0.546875 |
| recA | b2699 | recombinase A | chromosome | CDS | 2820730 | 1062 | - | 0.541431 |
| recB | b2820 | exonuclease V (RecBCD complex), beta subunit | chromosome | CDS | 2950483 | 3543 | - | 0.545583 |
| recC | b2822 | exonuclease V (RecBCD complex), gamma chain | chromosome | CDS | 2957082 | 3369 | - | 0.536064 |
| recD | b2819 | exonuclease V (RecBCD complex), alpha chain | chromosome | CDS | 2948657 | 1827 | - | 0.552819 |
| recE | b1350 | Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease | chromosome | CDS | 1412810 | 2601 | - | 0.494041 |
| recF | b3700 | recombination protein F | chromosome | CDS | 3878171 | 1074 | - | 0.550279 |
| recG | b3652 | ATP-dependent DNA helicase | chromosome | CDS | 3823233 | 2082 | + | 0.572046 |
| recJ | b2892 | ssDNA exonuclease, 5' --> 3'-specific | chromosome | CDS | 3034395 | 1734 | - | 0.566321 |
| recN | b2616 | recombination and repair protein | chromosome | CDS | 2749817 | 1662 | + | 0.518051 |
| recO | b2565 | DNA repair protein RecO | chromosome | CDS | 2699763 | 729 | - | 0.540466 |
| recQ | b3822 | ATP-dependent DNA helicase | chromosome | CDS | 4003887 | 1830 | + | 0.551366 |
| recR | b0472 | recombination protein RecR | chromosome | CDS | 493629 | 606 | + | 0.577558 |
| recT | b1349 | Rac prophage; recombination and repair protein | chromosome | CDS | 1412008 | 810 | - | 0.471605 |
| recX | b2698 | RecA regulator RecX | chromosome | CDS | 2820161 | 501 | - | 0.518962 |
| relA | b2784 | (p)ppGpp synthetase I/GTP pyrophosphokinase | chromosome | CDS | 2909439 | 2235 | - | 0.537808 |
| relB | b1564 | Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor | chromosome | CDS | 1643657 | 240 | - | 0.470833 |
| relE | b1563 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system | chromosome | CDS | 1643370 | 288 | - | 0.46875 |
| rem | b1561 | Qin prophage; predicted protein | chromosome | CDS | 1642675 | 252 | - | 0.404762 |
| renD | b0542 | DLP12 prophage; predicted protein | chromosome | CDS | 567285 | 186 | + | 0.489247 |
| rep | b3778 | DNA helicase and single-stranded DNA-dependent ATPase | chromosome | CDS | 3958700 | 2022 | + | 0.534619 |
| rfaB | b3628 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase | chromosome | CDS | 3801081 | 1110 | - | 0.393694 |
| rfaC | b3621 | ADP-heptose:LPS heptosyl transferase I | chromosome | CDS | 3794002 | 960 | + | 0.510417 |
| rfaD | b3619 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding | chromosome | CDS | 3792010 | 933 | + | 0.50911 |
| rfaE | b3052 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | chromosome | CDS | 3193342 | 1434 | - | 0.557183 |
| rfaF | b3620 | ADP-heptose:LPS heptosyltransferase II | chromosome | CDS | 3792952 | 1047 | + | 0.536772 |
| rfaG | b3631 | glucosyltransferase I | chromosome | CDS | 3803966 | 1125 | - | 0.448 |
| rfaH | b3842 | transcriptional activator RfaH | chromosome | CDS | 4022356 | 489 | - | 0.496933 |
| rfaI | b3627 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase | chromosome | CDS | 3800062 | 1020 | - | 0.361765 |
| rfaJ | b3626 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase | chromosome | CDS | 3799006 | 1017 | - | 0.33825 |
| rfaK | b3623 | lipopolysaccharide core biosynthesis | chromosome | CDS | 3796262 | 1074 | - | 0.310056 |
| rfaL | b3622 | O-antigen ligase | chromosome | CDS | 3794971 | 1260 | + | 0.319048 |
| rfaP | b3630 | kinase that phosphorylates core heptose of lipopolysaccharide | chromosome | CDS | 3803176 | 798 | - | 0.433584 |
| rfaQ | b3632 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3805087 | 1035 | - | 0.446377 |
| rfaS | b3629 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3802204 | 936 | - | 0.268162 |
| rfaY | b3625 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3798290 | 699 | - | 0.353362 |
| rfaZ | b3624 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3797368 | 852 | - | 0.325117 |
| rfbA | b2039 | glucose-1-phosphate thymidylyltransferase | chromosome | CDS | 2108162 | 882 | - | 0.427438 |
| rfbB | b2041 | dTDP-glucose 4,6 dehydratase, NAD(P)-binding | chromosome | CDS | 2110000 | 1086 | - | 0.436464 |
| rfbC | b2038 | dTDP-4-deoxyrhamnose-3,5-epimerase | chromosome | CDS | 2107605 | 558 | - | 0.387097 |
| rfbD | b2040 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase | chromosome | CDS | 2109101 | 900 | - | 0.465556 |
| rfbX | b2037 | predicted polisoprenol-linked O-antigen transporter | chromosome | CDS | 2106361 | 1248 | - | 0.354167 |
| rfe | b3784 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase | chromosome | CDS | 3965939 | 1104 | + | 0.494565 |
| rffA | b3791 | TDP-4-oxo-6-deoxy-D-glucose transaminase | chromosome | CDS | 3973169 | 1131 | + | 0.543767 |
| rffC | b3790 | TDP-fucosamine acetyltransferase | chromosome | CDS | 3972619 | 546 | + | 0.543956 |
| rffD | b3787 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase | chromosome | CDS | 3969283 | 1263 | + | 0.537609 |
| rffE | b3786 | UDP-N-acetyl glucosamine-2-epimerase | chromosome | CDS | 3968156 | 1131 | + | 0.526083 |
| rffG | b3788 | dTDP-glucose 4,6-dehydratase | chromosome | CDS | 3970545 | 1068 | + | 0.537453 |
| rffH | b3789 | glucose-1-phosphate thymidylyltransferase | chromosome | CDS | 3971631 | 882 | + | 0.55102 |
| rffM | b3794 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase | chromosome | CDS | 3977979 | 741 | + | 0.531714 |
| rffT | b4481 | 4-alpha-L-fucosyltransferase | chromosome | CDS | 3975548 | 1080 | + | 0.528704 |
| rhaA | b3903 | L-rhamnose isomerase | chromosome | CDS | 4092746 | 1260 | - | 0.561111 |
| rhaB | b3904 | rhamnulokinase | chromosome | CDS | 4094002 | 1470 | - | 0.547619 |
| rhaD | b3902 | rhamnulose-1-phosphate aldolase | chromosome | CDS | 4091471 | 825 | - | 0.557576 |
| rhaR | b3906 | DNA-binding transcriptional activator, L-rhamnose-binding | chromosome | CDS | 4096579 | 939 | + | 0.497338 |
| rhaS | b3905 | DNA-binding transcriptional activator, L-rhamnose-binding | chromosome | CDS | 4095759 | 837 | + | 0.518519 |
| rhaT | b3907 | L-rhamnose:proton symporter | chromosome | CDS | 4097514 | 1035 | - | 0.516908 |
| rhlB | b3780 | ATP-dependent RNA helicase | chromosome | CDS | 3962388 | 1266 | - | 0.525276 |
| rhlE | b0797 | RNA helicase | chromosome | CDS | 830095 | 1365 | + | 0.567033 |
| rho | b3783 | transcription termination factor Rho | chromosome | CDS | 3964440 | 1260 | + | 0.503175 |
| rhoL | b3782 | rho operon leader peptide | chromosome | CDS | 3964254 | 102 | + | 0.490196 |
| rhsA | b3593 | rhsA element core protein RshA | chromosome | CDS | 3760206 | 4134 | + | 0.595307 |
| rhsB | b3482 | rhsB element core protein RshB | chromosome | CDS | 3617215 | 4236 | + | 0.588055 |
| rhsC | b0700 | rhsC element core protein RshC | chromosome | CDS | 728806 | 4194 | + | 0.591559 |
| rhsD | b0497 | rhsD element protein | chromosome | CDS | 522485 | 4281 | + | 0.601261 |
| rhsE | b1456 | rhsE element core protein RshE | chromosome | CDS | 1525914 | 2049 | + | 0.581747 |
| rhtA | b0813 | threonine and homoserine efflux system | chromosome | CDS | 848433 | 888 | - | 0.53491 |
| rhtB | b3824 | neutral amino-acid efflux system | chromosome | CDS | 4006462 | 621 | - | 0.521739 |
| rhtC | b3823 | threonine efflux system | chromosome | CDS | 4005780 | 621 | + | 0.52496 |
| ribA | b1277 | GTP cyclohydrolase II protein | chromosome | CDS | 1336594 | 591 | - | 0.500846 |
| ribB | b3041 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 3181835 | 654 | - | 0.518349 |
| ribC | b1662 | riboflavin synthase subunit alpha | chromosome | CDS | 1740625 | 642 | - | 0.475078 |
| ribD | b0414 | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase | chromosome | CDS | 432679 | 1104 | + | 0.553442 |
| ribE | b0415 | riboflavin synthase subunit beta | chromosome | CDS | 433871 | 471 | + | 0.522293 |
| ribF | b0025 | hypothetical protein | chromosome | CDS | 21407 | 942 | + | 0.536093 |
| rihA | b0651 | ribonucleoside hydrolase 1 | chromosome | CDS | 682700 | 936 | - | 0.508547 |
| rihB | b2162 | ribonucleoside hydrolase 2 | chromosome | CDS | 2252267 | 942 | - | 0.52017 |
| rihC | b0030 | ribonucleoside hydrolase 3 | chromosome | CDS | 27293 | 915 | + | 0.562842 |
| rimI | b4373 | ribosomal-protein-alanine N-acetyltransferase | chromosome | CDS | 4606208 | 447 | + | 0.52349 |
| rimJ | b1066 | ribosomal-protein-S5-alanine N-acetyltransferase | chromosome | CDS | 1124785 | 585 | + | 0.494017 |
| rimK | b0852 | ribosomal protein S6 modification protein | chromosome | CDS | 891190 | 903 | + | 0.562569 |
| rimL | b1427 | ribosomal-protein-L7/L12-serine acetyltransferase | chromosome | CDS | 1496962 | 540 | + | 0.433333 |
| rimM | b2608 | 16S rRNA-processing protein | chromosome | CDS | 2743392 | 549 | - | 0.489982 |
| rlmB | b4180 | 23S rRNA (Gm2251)-methyltransferase | chromosome | CDS | 4407298 | 732 | + | 0.562842 |
| rlpA | b0633 | minor lipoprotein | chromosome | CDS | 663325 | 1089 | - | 0.573003 |
| rlpB | b0641 | minor lipoprotein | chromosome | CDS | 670828 | 582 | - | 0.522337 |
| rluA | b0058 | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) | chromosome | CDS | 59687 | 660 | - | 0.539394 |
| rluB | b1269 | 23S rRNA pseudouridylate synthase | chromosome | CDS | 1324876 | 876 | + | 0.537671 |
| rluC | b1086 | 23S rRNA pseudouridylate synthase | chromosome | CDS | 1144163 | 960 | + | 0.514583 |
| rluD | b2594 | 23S rRNA pseudouridine synthase | chromosome | CDS | 2733053 | 981 | - | 0.528033 |
| rmf | b0953 | ribosome modulation factor | chromosome | CDS | 1014938 | 168 | + | 0.541667 |
| rmuC | b3832 | predicted recombination limiting protein | chromosome | CDS | 4015356 | 1428 | + | 0.530812 |
| rna | b0611 | ribonuclease I | chromosome | CDS | 643420 | 807 | - | 0.511772 |
| rnb | b1286 | exoribonuclease II | chromosome | CDS | 1345002 | 1935 | - | 0.5323 |
| rnc | b2567 | ribonuclease III | chromosome | CDS | 2701405 | 681 | - | 0.506608 |
| rnd | b1804 | ribonuclease D | chromosome | CDS | 1884888 | 1128 | - | 0.54078 |
| rne | b1084 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein | chromosome | CDS | 1140405 | 3186 | - | 0.556497 |
| rng | b3247 | ribonuclease G | chromosome | CDS | 3394348 | 1470 | - | 0.521088 |
| rnhA | b0214 | ribonuclease H | chromosome | CDS | 235535 | 468 | - | 0.504274 |
| rnhB | b0183 | ribonuclease HII | chromosome | CDS | 204493 | 597 | + | 0.572864 |
| rnk | b0610 | nucleoside diphosphate kinase regulator | chromosome | CDS | 642780 | 411 | - | 0.547445 |
| rnpA | b3704 | ribonuclease P | chromosome | CDS | 3882516 | 360 | + | 0.558333 |
| rnpB | b3123 | RNase P RNA component precursor RnpB | chromosome | misc_RNA | 3268238 | 377 | - | 0.618037 |
| rnr | b4179 | exoribonuclease R, RNase R | chromosome | CDS | 4404677 | 2442 | + | 0.552826 |
| rnt | b1652 | ribonuclease T | chromosome | CDS | 1726371 | 648 | + | 0.541667 |
| rob | b4396 | DNA-binding transcriptional activator | chromosome | CDS | 4632464 | 870 | - | 0.532184 |
| rof | b0189 | modulator of Rho-dependent transcription termination | chromosome | CDS | 213678 | 255 | - | 0.478431 |
| rpe | b3386 | ribulose-phosphate 3-epimerase | chromosome | CDS | 3512404 | 678 | - | 0.510324 |
| rph | b3643 | ribonuclease PH | chromosome | CDS | 3813886 | 687 | - | 0.561863 |
| rpiA | b2914 | ribose-5-phosphate isomerase A | chromosome | CDS | 3056688 | 660 | - | 0.518182 |
| rpiB | b4090 | ribose-5-phosphate isomerase B | chromosome | CDS | 4311373 | 450 | + | 0.502222 |
| rpiR | b4089 | DNA-binding transcriptional repressor | chromosome | CDS | 4310124 | 891 | - | 0.474747 |
| rplA | b3984 | 50S ribosomal protein L1 | chromosome | CDS | 4176902 | 705 | + | 0.516312 |
| rplB | b3317 | 50S ribosomal protein L2 | chromosome | CDS | 3448565 | 822 | - | 0.526764 |
| rplC | b3320 | 50S ribosomal protein L3 | chromosome | CDS | 3450319 | 630 | - | 0.514286 |
| rplD | b3319 | 50S ribosomal protein L4 | chromosome | CDS | 3449703 | 606 | - | 0.529703 |
| rplE | b3308 | 50S ribosomal protein L5 | chromosome | CDS | 3444921 | 540 | - | 0.498148 |
| rplF | b3305 | 50S ribosomal protein L6 | chromosome | CDS | 3443629 | 534 | - | 0.520599 |
| rplI | b4203 | 50S ribosomal protein L9 | chromosome | CDS | 4424131 | 450 | + | 0.497778 |
| rplJ | b3985 | 50S ribosomal protein L10 | chromosome | CDS | 4178019 | 498 | + | 0.524096 |
| rplK | b3983 | 50S ribosomal protein L11 | chromosome | CDS | 4176470 | 429 | + | 0.522144 |
| rplL | b3986 | 50S ribosomal protein L7/L12 | chromosome | CDS | 4178583 | 366 | + | 0.461749 |
| rplM | b3231 | 50S ribosomal protein L13 | chromosome | CDS | 3376245 | 429 | - | 0.505827 |
| rplN | b3310 | 50S ribosomal protein L14 | chromosome | CDS | 3445800 | 372 | - | 0.510753 |
| rplO | b3301 | 50S ribosomal protein L15 | chromosome | CDS | 3442127 | 435 | - | 0.535632 |
| rplP | b3313 | 50S ribosomal protein L16 | chromosome | CDS | 3446781 | 411 | - | 0.518248 |
| rplQ | b3294 | 50S ribosomal protein L17 | chromosome | CDS | 3437638 | 384 | - | 0.536458 |
| rplR | b3304 | 50S ribosomal protein L18 | chromosome | CDS | 3443266 | 354 | - | 0.536723 |
| rplS | b2606 | 50S ribosomal protein L19 | chromosome | CDS | 2742205 | 348 | - | 0.482759 |
| rplT | b1716 | 50S ribosomal protein L20 | chromosome | CDS | 1797417 | 357 | - | 0.481793 |
| rplU | b3186 | 50S ribosomal protein L21 | chromosome | CDS | 3331162 | 312 | - | 0.483974 |
| rplV | b3315 | 50S ribosomal protein L22 | chromosome | CDS | 3447923 | 333 | - | 0.498498 |
| rplW | b3318 | 50S ribosomal protein L23 | chromosome | CDS | 3449404 | 303 | - | 0.481848 |
| rplX | b3309 | 50S ribosomal protein L24 | chromosome | CDS | 3445475 | 315 | - | 0.460317 |
| rplY | b2185 | 50S ribosomal protein L25 | chromosome | CDS | 2280539 | 285 | + | 0.505263 |
| rpmA | b3185 | 50S ribosomal protein L27 | chromosome | CDS | 3330884 | 258 | - | 0.5 |
| rpmB | b3637 | 50S ribosomal protein L28 | chromosome | CDS | 3809461 | 237 | - | 0.531646 |
| rpmC | b3312 | 50S ribosomal protein L29 | chromosome | CDS | 3446590 | 192 | - | 0.541667 |
| rpmD | b3302 | 50S ribosomal protein L30 | chromosome | CDS | 3442565 | 180 | - | 0.5 |
| rpmE | b3936 | 50S ribosomal subunit protein L31 | chromosome | CDS | 4125036 | 213 | + | 0.492958 |
| rpmF | b1089 | 50S ribosomal protein L32 | chromosome | CDS | 1146590 | 174 | + | 0.54023 |
| rpmG | b3636 | 50S ribosomal protein L33 | chromosome | CDS | 3809273 | 168 | - | 0.404762 |
| rpmH | b3703 | 50S ribosomal protein L34 | chromosome | CDS | 3882359 | 141 | + | 0.51773 |
| rpmI | b1717 | 50S ribosomal protein L35 | chromosome | CDS | 1797826 | 198 | - | 0.5 |
| rpmJ | b3299 | 50S ribosomal protein L36 | chromosome | CDS | 3440640 | 117 | - | 0.478632 |
| rpoA | b3295 | DNA-directed RNA polymerase subunit alpha | chromosome | CDS | 3438062 | 990 | - | 0.522222 |
| rpoB | b3987 | DNA-directed RNA polymerase subunit beta | chromosome | CDS | 4179268 | 4029 | + | 0.526185 |
| rpoC | b3988 | DNA-directed RNA polymerase subunit beta' | chromosome | CDS | 4183373 | 4224 | + | 0.538352 |
| rpoD | b3067 | RNA polymerase sigma factor | chromosome | CDS | 3211069 | 1842 | + | 0.529859 |
| rpoE | b2573 | RNA polymerase, sigma 24 (sigma E) factor | chromosome | CDS | 2707459 | 576 | - | 0.487847 |
| rpoH | b3461 | RNA polymerase sigma factor | chromosome | CDS | 3597952 | 855 | - | 0.54152 |
| rpoN | b3202 | DNA-directed RNA polymerase subunit N | chromosome | CDS | 3342739 | 1434 | + | 0.528591 |
| rpoS | b2741 | RNA polymerase sigma factor | chromosome | CDS | 2864581 | 993 | - | 0.520644 |
| rpoZ | b3649 | DNA-directed RNA polymerase subunit omega | chromosome | CDS | 3820129 | 276 | + | 0.532609 |
| rprA | b4431 | regulatory sRNA | chromosome | misc_RNA | 1768396 | 105 | + | 0.390476 |
| rpsA | b0911 | 30S ribosomal protein S1 | chromosome | CDS | 961218 | 1674 | + | 0.511947 |
| rpsB | b0169 | 30S ribosomal protein S2 | chromosome | CDS | 189874 | 726 | + | 0.513774 |
| rpsC | b3314 | 30S ribosomal protein S3 | chromosome | CDS | 3447204 | 702 | - | 0.509971 |
| rpsD | b3296 | 30S ribosomal protein S4 | chromosome | CDS | 3439077 | 621 | - | 0.507246 |
| rpsE | b3303 | 30S ribosomal protein S5 | chromosome | CDS | 3442748 | 504 | - | 0.501984 |
| rpsF | b4200 | 30S ribosomal protein S6 | chromosome | CDS | 4423141 | 396 | + | 0.525253 |
| rpsG | b3341 | 30S ribosomal protein S7 | chromosome | CDS | 3471564 | 540 | - | 0.501852 |
| rpsH | b3306 | 30S ribosomal protein S8 | chromosome | CDS | 3444175 | 393 | - | 0.501272 |
| rpsI | b3230 | 30S ribosomal protein S9 | chromosome | CDS | 3375837 | 393 | - | 0.524173 |
| rpsJ | b3321 | 30S ribosomal protein S10 | chromosome | CDS | 3450981 | 312 | - | 0.554487 |
| rpsK | b3297 | 30S ribosomal protein S11 | chromosome | CDS | 3439731 | 390 | - | 0.515385 |
| rpsL | b3342 | 30S ribosomal protein S12 | chromosome | CDS | 3472200 | 375 | - | 0.533333 |
| rpsM | b3298 | 30S ribosomal protein S13 | chromosome | CDS | 3440137 | 357 | - | 0.518207 |
| rpsN | b3307 | 30S ribosomal protein S14 | chromosome | CDS | 3444601 | 306 | - | 0.526144 |
| rpsO | b3165 | 30S ribosomal protein S15 | chromosome | CDS | 3309437 | 270 | - | 0.518519 |
| rpsP | b2609 | 30S ribosomal protein S16 | chromosome | CDS | 2743959 | 249 | - | 0.514056 |
| rpsQ | b3311 | 30S ribosomal protein S17 | chromosome | CDS | 3446336 | 255 | - | 0.47451 |
| rpsR | b4202 | 30S ribosomal protein S18 | chromosome | CDS | 4423862 | 228 | + | 0.526316 |
| rpsS | b3316 | 30S ribosomal protein S19 | chromosome | CDS | 3448270 | 279 | - | 0.487455 |
| rpsT | b0023 | 30S ribosomal protein S20 | chromosome | CDS | 20815 | 264 | - | 0.465909 |
| rpsU | b3065 | 30S ribosomal protein S21 | chromosome | CDS | 3208803 | 216 | + | 0.518519 |
| rraA | b3929 | ribonuclease activity regulator protein RraA | chromosome | CDS | 4116868 | 486 | - | 0.522634 |
| rrfA | b3855 | 5S ribosomal RNA | chromosome | rRNA | 4038540 | 120 | + | 0.625 |
| rrfB | b3971 | 5S ribosomal RNA | chromosome | rRNA | 4169660 | 120 | + | 0.633333 |
| rrfC | b3759 | 5S ribosomal RNA | chromosome | rRNA | 3944723 | 120 | + | 0.641667 |
| rrfD | b3274 | 5S ribosomal RNA | chromosome | rRNA | 3421690 | 120 | - | 0.641667 |
| rrfE | b4010 | 5S ribosomal RNA | chromosome | rRNA | 4211063 | 120 | + | 0.633333 |
| rrfF | b3272 | 5S ribosomal RNA | chromosome | rRNA | 3421445 | 120 | - | 0.616667 |
| rrfG | b2588 | 5S ribosomal RNA | chromosome | rRNA | 2724091 | 120 | - | 0.641667 |
| rrfH | b0205 | 5S ribosomal RNA | chromosome | rRNA | 228756 | 120 | + | 0.641667 |
| rrlA | b3854 | 23S ribosomal RNA | chromosome | rRNA | 4035542 | 2905 | + | 0.53253 |
| rrlB | b3970 | 23S ribosomal RNA | chromosome | rRNA | 4166664 | 2904 | + | 0.534091 |
| rrlC | b3758 | 23S ribosomal RNA | chromosome | rRNA | 3941727 | 2904 | + | 0.533058 |
| rrlD | b3275 | 23S ribosomal RNA | chromosome | rRNA | 3421902 | 2904 | - | 0.533402 |
| rrlE | b4009 | 23S ribosomal RNA | chromosome | rRNA | 4208066 | 2904 | + | 0.534091 |
| rrlG | b2589 | 23S ribosomal RNA | chromosome | rRNA | 2724303 | 2904 | - | 0.534091 |
| rrlH | b0204 | 23S ribosomal RNA | chromosome | rRNA | 225759 | 2904 | + | 0.532369 |
| rrmA | b1822 | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1904275 | 810 | - | 0.51358 |
| rrmJ | b3179 | 23S rRNA methyltransferase | chromosome | CDS | 3325057 | 630 | - | 0.504762 |
| rrsA | b3851 | 16S ribosomal RNA | chromosome | rRNA | 4033554 | 1542 | + | 0.54345 |
| rrsB | b3968 | 16S ribosomal RNA | chromosome | rRNA | 4164682 | 1542 | + | 0.544099 |
| rrsC | b3756 | 16S ribosomal RNA | chromosome | rRNA | 3939831 | 1542 | + | 0.544099 |
| rrsD | b3278 | 16S ribosomal RNA | chromosome | rRNA | 3425243 | 1542 | - | 0.545396 |
| rrsE | b4007 | 16S ribosomal RNA | chromosome | rRNA | 4206170 | 1542 | + | 0.544099 |
| rrsG | b2591 | 16S ribosomal RNA | chromosome | rRNA | 2727638 | 1542 | - | 0.546044 |
| rrsH | b0201 | 16S ribosomal RNA | chromosome | rRNA | 223771 | 1542 | + | 0.54345 |
| rsd | b3995 | stationary phase protein, binds sigma 70 RNA polymerase subunit | chromosome | CDS | 4194355 | 477 | - | 0.490566 |
| rseA | b2572 | anti-sigma factor | chromosome | CDS | 2706776 | 651 | - | 0.522273 |
| rseB | b2571 | periplasmic negative regulator of sigmaE | chromosome | CDS | 2705820 | 957 | - | 0.507837 |
| rseC | b2570 | RseC protein involved in reduction of the SoxR iron-sulfur cluster | chromosome | CDS | 2705344 | 480 | - | 0.547917 |
| rsgA | b4161 | ribosome-associated GTPase | chromosome | CDS | 4388480 | 1053 | - | 0.539411 |
| rsmB | b3289 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent | chromosome | CDS | 3433229 | 1290 | + | 0.496899 |
| rsmC | b4371 | 16S ribosomal RNA m2G1207 methyltransferase | chromosome | CDS | 4604692 | 1032 | - | 0.557171 |
| rspA | b1581 | predicted dehydratase | chromosome | CDS | 1651951 | 1215 | - | 0.506996 |
| rspB | b1580 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 1650920 | 1020 | - | 0.44902 |
| rssA | b1234 | hypothetical protein | chromosome | CDS | 1288429 | 945 | + | 0.502645 |
| rssB | b1235 | response regulator of RpoS | chromosome | CDS | 1289465 | 1014 | + | 0.486193 |
| rstA | b1608 | DNA-binding response regulator in two-component regulatory system with RstB | chromosome | CDS | 1680174 | 729 | + | 0.491084 |
| rstB | b1609 | sensory histidine kinase in two-component regulatory system with RstA | chromosome | CDS | 1680906 | 1302 | + | 0.506912 |
| rsuA | b2183 | 16S rRNA pseudouridylate 516 synthase | chromosome | CDS | 2277810 | 696 | - | 0.528736 |
| rsxA | b1627 | Na(+)-translocating NADH-quinone reductase subunit E | chromosome | CDS | 1703791 | 582 | + | 0.515464 |
| rsxB | b1628 | electron transport complex protein RnfB | chromosome | CDS | 1704372 | 579 | + | 0.545769 |
| rsxC | b1629 | electron transport complex protein RnfC | chromosome | CDS | 1704943 | 2223 | + | 0.553756 |
| rsxD | b1630 | electron transport complex protein RnfD | chromosome | CDS | 1707166 | 1059 | + | 0.525968 |
| rsxE | b1632 | NADH-ubiquinone oxidoreductase | chromosome | CDS | 1708852 | 696 | + | 0.527299 |
| rsxG | b1631 | electron transport complex protein RnfG | chromosome | CDS | 1708228 | 621 | + | 0.531401 |
| rtcA | b4475 | RNA 3'-terminal-phosphate cyclase | chromosome | CDS | 3553855 | 1017 | - | 0.596853 |
| rtcB | b3421 | hypothetical protein | chromosome | CDS | 3554875 | 1227 | - | 0.509372 |
| rtcR | b3422 | sigma 54-dependent transcriptional regulator of rtcBA expression | chromosome | CDS | 3556290 | 1599 | + | 0.557849 |
| rtn | b2176 | hypothetical protein | chromosome | CDS | 2268748 | 1557 | + | 0.505459 |
| rttR | b4425 | regulatory sRNA | chromosome | misc_RNA | 1286289 | 171 | - | 0.578947 |
| rumA | b2785 | 23S rRNA (uracil-5-)-methyltransferase | chromosome | CDS | 2911721 | 1302 | - | 0.514593 |
| rumB | b0859 | 23S rRNA m(5)U747-methyltransferase | chromosome | CDS | 897741 | 1128 | + | 0.546099 |
| rusA | b0550 | DLP12 prophage; endonuclease RUS | chromosome | CDS | 572594 | 363 | + | 0.53168 |
| ruvA | b1861 | Holliday junction DNA helicase motor protein | chromosome | CDS | 1943389 | 612 | - | 0.53268 |
| ruvB | b1860 | Holliday junction DNA helicase B | chromosome | CDS | 1942370 | 1011 | - | 0.527201 |
| ruvC | b1863 | Holliday junction resolvase | chromosome | CDS | 1944879 | 522 | - | 0.559387 |
| rybA | b4416 | unknown RNA | chromosome | misc_RNA | 852175 | 89 | - | 0.47191 |
| rybB | b4417 | unknown RNA | chromosome | misc_RNA | 887199 | 79 | - | 0.455696 |
| rydB | b4430 | regulatory sRNA | chromosome | misc_RNA | 1762737 | 68 | - | 0.529412 |
| ryeA | b4432 | unknown RNA | chromosome | misc_RNA | 1921090 | 249 | + | 0.457831 |
| ryeB | b4433 | unknown RNA | chromosome | misc_RNA | 1921188 | 121 | - | 0.46281 |
| ryeC | b4436 | unknown RNA | chromosome | misc_RNA | 2151299 | 149 | + | 0.463087 |
| ryeD | b4437 | unknown RNA | chromosome | misc_RNA | 2151634 | 143 | + | 0.482517 |
| ryeE | b4438 | unknown RNA | chromosome | misc_RNA | 2165136 | 86 | + | 0.44186 |
| ryfA | b4440 | unknown RNA | chromosome | misc_RNA | 2651877 | 304 | + | 0.526316 |
| rygA | b4444 | unknown RNA | chromosome | misc_RNA | 2974124 | 88 | - | 0.5 |
| rygB | b4445 | unknown RNA | chromosome | misc_RNA | 2974332 | 76 | - | 0.513158 |
| rygC | b4446 | unknown RNA | chromosome | misc_RNA | 3054837 | 151 | + | 0.410596 |
| rygD | b4447 | unknown RNA | chromosome | misc_RNA | 3192773 | 150 | - | 0.42 |
| ryhA | b4450 | unknown RNA | chromosome | misc_RNA | 3348599 | 108 | + | 0.537037 |
| ryhB | b4451 | regulatory sRNA | chromosome | misc_RNA | 3578946 | 94 | - | 0.510638 |
| ryiA | b4456 | regulatory sRNA | chromosome | misc_RNA | 3984455 | 172 | + | 0.476744 |
| ryjA | b4459 | unknown RNA | chromosome | misc_RNA | 4275950 | 140 | - | 0.521429 |
| rzoD | b4510 | DLP12 prophage; predicted lipoprotein | chromosome | CDS | 577550 | 183 | + | 0.568306 |
| rzoR | b4528 | Rac prophage; predicted lipoprotein | chromosome | CDS | 1421424 | 186 | + | 0.569892 |
| rzpD | b0556 | DLP12 prophage; predicted murein endopeptidase | chromosome | CDS | 577330 | 462 | + | 0.512987 |
| rzpR | b1362 | Rac prophage; predicted defective peptidase | chromosome | CDS | 1421369 | 300 | + | 0.533333 |
| sanA | b2144 | hypothetical protein | chromosome | CDS | 2230900 | 720 | + | 0.477778 |
| sapA | b1294 | predicted antimicrobial peptide transporter subunit | chromosome | CDS | 1353491 | 1644 | - | 0.542579 |
| sapB | b1293 | predicted antimicrobial peptide transporter subunit | chromosome | CDS | 1352529 | 966 | - | 0.514493 |
| sapC | b1292 | predicted antimicrobial peptide transporter subunit | chromosome | CDS | 1351652 | 891 | - | 0.569024 |
| sapD | b1291 | predicted antimicrobial peptide transporter subunit | chromosome | CDS | 1350660 | 993 | - | 0.513595 |
| sapF | b1290 | predicted antimicrobial peptide transporter subunit | chromosome | CDS | 1349852 | 807 | - | 0.511772 |
| sbcB | b2011 | exonuclease I | chromosome | CDS | 2080780 | 1428 | + | 0.5007 |
| sbcC | b0397 | exonuclease, dsDNA, ATP-dependent | chromosome | CDS | 411831 | 3147 | - | 0.537973 |
| sbcD | b0398 | exonuclease, dsDNA, ATP-dependent | chromosome | CDS | 414974 | 1203 | - | 0.532835 |
| sbmA | b0377 | predicted transporter | chromosome | CDS | 395863 | 1221 | + | 0.513514 |
| sbmC | b2009 | DNA gyrase inhibitor | chromosome | CDS | 2078813 | 474 | - | 0.472574 |
| sbp | b3917 | sulfate transporter subunit | chromosome | CDS | 4106857 | 990 | + | 0.506061 |
| sdaA | b1814 | L-serine deaminase I | chromosome | CDS | 1894956 | 1365 | + | 0.539927 |
| sdaB | b2797 | L-serine deaminase II | chromosome | CDS | 2927598 | 1368 | + | 0.549708 |
| sdaC | b2796 | predicted serine transporter | chromosome | CDS | 2926251 | 1290 | + | 0.523256 |
| sdhA | b0723 | succinate dehydrogenase flavoprotein subunit | chromosome | CDS | 755130 | 1767 | + | 0.563101 |
| sdhB | b0724 | succinate dehydrogenase, FeS subunit | chromosome | CDS | 756912 | 717 | + | 0.516039 |
| sdhC | b0721 | succinate dehydrogenase cytochrome b556 large membrane subunit | chromosome | CDS | 754400 | 390 | + | 0.492308 |
| sdhD | b0722 | succinate dehydrogenase cytochrome b556 small membrane subunit | chromosome | CDS | 754783 | 348 | + | 0.511494 |
| sdiA | b1916 | DNA-binding transcriptional activator | chromosome | CDS | 1994134 | 723 | - | 0.467497 |
| secA | b0098 | translocase | chromosome | CDS | 108279 | 2706 | + | 0.524021 |
| secB | b3609 | export protein SecB | chromosome | CDS | 3781684 | 468 | - | 0.508547 |
| secD | b0408 | protein export protein SecD | chromosome | CDS | 426871 | 1848 | + | 0.531926 |
| secE | b3981 | translocase | chromosome | CDS | 4175381 | 384 | + | 0.549479 |
| secF | b0409 | protein export protein SecF | chromosome | CDS | 428729 | 972 | + | 0.516461 |
| secG | b3175 | protein-export membrane protein | chromosome | CDS | 3320195 | 333 | - | 0.495495 |
| secM | b0097 | SecA regulator SecM | chromosome | CDS | 107705 | 513 | + | 0.539961 |
| secY | b3300 | protein translocase subunit SecY | chromosome | CDS | 3440788 | 1332 | - | 0.496997 |
| selA | b3591 | selenocysteine synthase | chromosome | CDS | 3757881 | 1392 | - | 0.560345 |
| selB | b3590 | selenocysteinyl-tRNA-specific translation factor | chromosome | CDS | 3756040 | 1845 | - | 0.563686 |
| selC | b3658 | tRNA-Sec | chromosome | tRNA | 3834245 | 95 | + | 0.642105 |
| selD | b1764 | selenophosphate synthetase | chromosome | CDS | 1844989 | 1044 | - | 0.549808 |
| seqA | b0687 | regulatory protein for replication initiation | chromosome | CDS | 712210 | 546 | + | 0.496337 |
| serA | b2913 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 3055200 | 1233 | - | 0.529603 |
| serB | b4388 | 3-phosphoserine phosphatase | chromosome | CDS | 4622918 | 969 | + | 0.566563 |
| serC | b0907 | phosphoserine aminotransferase | chromosome | CDS | 956876 | 1089 | + | 0.501377 |
| serS | b0893 | seryl-tRNA synthetase | chromosome | CDS | 938651 | 1293 | + | 0.526682 |
| serT | b0971 | tRNA-Ser | chromosome | tRNA | 1030848 | 88 | - | 0.602273 |
| serU | b1975 | tRNA-Ser | chromosome | tRNA | 2041492 | 90 | - | 0.633333 |
| serV | b2695 | tRNA-Ser | chromosome | tRNA | 2816575 | 93 | - | 0.645161 |
| serW | b0883 | tRNA-Ser | chromosome | tRNA | 925107 | 88 | - | 0.613636 |
| serX | b1032 | tRNA-Ser | chromosome | tRNA | 1096788 | 88 | - | 0.613636 |
| setA | b0070 | broad specificity sugar efflux system | chromosome | CDS | 77621 | 1179 | + | 0.485157 |
| setB | b2170 | lactose/glucose efflux system | chromosome | CDS | 2261885 | 1182 | + | 0.530457 |
| setC | b3659 | predicted sugar efflux system | chromosome | CDS | 3834976 | 1185 | + | 0.460759 |
| sfcA | b1479 | malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) | chromosome | CDS | 1551996 | 1698 | - | 0.520024 |
| sfmA | b0530 | predicted fimbrial-like adhesin protein | chromosome | CDS | 557435 | 543 | + | 0.445672 |
| sfmC | b0531 | pilin chaperone, periplasmic | chromosome | CDS | 558197 | 693 | + | 0.425685 |
| sfmD | b0532 | predicted outer membrane export usher protein | chromosome | CDS | 558920 | 2604 | + | 0.478111 |
| sfmF | b0534 | predicted fimbrial-like adhesin protein | chromosome | CDS | 562553 | 516 | + | 0.5 |
| sfmH | b0533 | predicted fimbrial-like adhesin protein | chromosome | CDS | 561565 | 978 | + | 0.453988 |
| sfsA | b0146 | sugar fermentation stimulation protein A | chromosome | CDS | 160782 | 705 | - | 0.493617 |
| sfsB | b3188 | DNA-binding transcriptional activator of maltose metabolism | chromosome | CDS | 3332931 | 279 | + | 0.501792 |
| sgbE | b3583 | L-ribulose-5-phosphate 4-epimerase | chromosome | CDS | 3748109 | 696 | + | 0.573276 |
| sgbH | b3581 | 3-keto-L-gulonate 6-phosphate decarboxylase | chromosome | CDS | 3746600 | 663 | + | 0.594269 |
| sgbU | b3582 | predicted L-xylulose 5-phosphate 3-epimerase | chromosome | CDS | 3747255 | 861 | + | 0.557491 |
| sgcA | b4302 | KpLE2 phage-like element; predicted phosphotransferase enzyme IIA component | chromosome | CDS | 4525572 | 432 | - | 0.543981 |
| sgcB | b4565 | predicted enzyme IIB component of PTS | chromosome | CDS | 4528278 | 279 | - | 0.483871 |
| sgcC | b4304 | KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component | chromosome | CDS | 4526953 | 1314 | - | 0.517504 |
| sgcE | b4301 | ribulose-phosphate 3-epimerase | chromosome | CDS | 4524928 | 633 | - | 0.554502 |
| sgcQ | b4303 | KpLE2 phage-like element; predicted nucleoside triphosphatase | chromosome | CDS | 4526134 | 807 | - | 0.532838 |
| sgcR | b4300 | KpLE2 phage-like element; predicted DNA-binding transcriptional regulator | chromosome | CDS | 4524129 | 783 | - | 0.496807 |
| sgcX | b4305 | KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain | chromosome | CDS | 4528553 | 1122 | - | 0.524064 |
| sgrR | b0069 | DNA-binding transcriptional regulator | chromosome | CDS | 75644 | 1656 | - | 0.548913 |
| sgrS | b4577 | small antisense RNA | chromosome | misc_RNA | 77367 | 227 | + | 0.475771 |
| shiA | b1981 | shikimate transporter | chromosome | CDS | 2051667 | 1317 | + | 0.504176 |
| sieB | b1353 | Rac prophage; phage superinfection exclusion protein | chromosome | CDS | 1416695 | 489 | + | 0.372188 |
| sixA | b2340 | phosphohistidine phosphatase | chromosome | CDS | 2454349 | 486 | - | 0.532922 |
| slp | b3506 | outer membrane lipoprotein | chromosome | CDS | 3651984 | 567 | + | 0.458554 |
| slt | b4392 | lytic murein transglycosylase, soluble | chromosome | CDS | 4628756 | 1938 | + | 0.545408 |
| slyA | b1642 | transcriptional regulator SlyA | chromosome | CDS | 1718414 | 435 | - | 0.482759 |
| slyB | b1641 | outer membrane lipoprotein | chromosome | CDS | 1717900 | 468 | + | 0.512821 |
| slyD | b3349 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 3475929 | 591 | - | 0.553299 |
| slyX | b3348 | hypothetical protein | chromosome | CDS | 3475662 | 219 | + | 0.52968 |
| smf | b4473 | hypothetical protein | chromosome | CDS | 3430458 | 1125 | - | 0.509333 |
| smg | b3284 | hypothetical protein | chromosome | CDS | 3430013 | 474 | - | 0.459916 |
| smpA | b2617 | small membrane lipoprotein | chromosome | CDS | 2751627 | 342 | + | 0.494152 |
| smpB | b2620 | SsrA-binding protein | chromosome | CDS | 2752918 | 483 | + | 0.517598 |
| smtA | b0921 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 972760 | 786 | + | 0.515267 |
| sodA | b3908 | superoxide dismutase, Mn | chromosome | CDS | 4098833 | 621 | + | 0.533011 |
| sodB | b1656 | superoxide dismutase, Fe | chromosome | CDS | 1733402 | 582 | + | 0.501718 |
| sodC | b1646 | superoxide dismutase, Cu, Zn | chromosome | CDS | 1722158 | 522 | - | 0.528736 |
| sohA | b3129 | predicted regulator | chromosome | CDS | 3275024 | 336 | + | 0.47619 |
| sohB | b1272 | predicted inner membrane peptidase | chromosome | CDS | 1327356 | 1050 | + | 0.505714 |
| sokB | b4429 | regulatory antisense sRNA | chromosome | misc_RNA | 1490143 | 53 | + | 0.528302 |
| sokC | b4413 | regulatory antisense RNA | chromosome | misc_RNA | 16952 | 55 | + | 0.472727 |
| solA | b1059 | N-methyltryptophan oxidase, FAD-binding | chromosome | CDS | 1118691 | 1119 | - | 0.524576 |
| soxR | b4063 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing | chromosome | CDS | 4275492 | 465 | + | 0.52043 |
| soxS | b4062 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4275083 | 324 | - | 0.509259 |
| speA | b2938 | arginine decarboxylase | chromosome | CDS | 3081957 | 1977 | - | 0.542742 |
| speB | b2937 | agmatinase | chromosome | CDS | 3080899 | 921 | - | 0.546145 |
| speC | b2965 | ornithine decarboxylase, constitutive | chromosome | CDS | 3105042 | 2136 | - | 0.522004 |
| speD | b0120 | S-adenosylmethionine decarboxylase proenzyme | chromosome | CDS | 134788 | 795 | - | 0.461635 |
| speE | b0121 | spermidine synthase | chromosome | CDS | 135598 | 867 | - | 0.507497 |
| speF | b0693 | ornithine decarboxylase isozyme, inducible | chromosome | CDS | 717485 | 2199 | - | 0.493406 |
| speG | b1584 | spermidine N1-acetyltransferase | chromosome | CDS | 1654208 | 561 | + | 0.468806 |
| spf | b3864 | Spot 42 RNA | chromosome | misc_RNA | 4047922 | 109 | + | 0.422018 |
| spoT | b3650 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | chromosome | CDS | 3820423 | 2109 | + | 0.537221 |
| sppA | b1766 | protease IV (signal peptide peptidase) | chromosome | CDS | 1846861 | 1857 | + | 0.517501 |
| spr | b2175 | predicted peptidase, outer membrane lipoprotein | chromosome | CDS | 2268001 | 567 | + | 0.467372 |
| sprT | b2944 | hypothetical protein | chromosome | CDS | 3087777 | 498 | + | 0.552209 |
| spy | b1743 | envelope stress induced periplasmic protein | chromosome | CDS | 1823164 | 486 | - | 0.50823 |
| sra | b1480 | 30S ribosomal subunit protein S22 | chromosome | CDS | 1553850 | 138 | - | 0.442029 |
| sraB | b4418 | unknown RNA | chromosome | misc_RNA | 1145812 | 169 | + | 0.384615 |
| sraD | b4442 | unknown RNA | chromosome | misc_RNA | 2812823 | 75 | + | 0.426667 |
| sraF | b4448 | unknown RNA | chromosome | misc_RNA | 3236396 | 188 | + | 0.494681 |
| sraG | b4449 | unknown RNA | chromosome | misc_RNA | 3309247 | 174 | + | 0.494253 |
| srlA | b2702 | glucitol/sorbitol-specific enzyme IIC component of PTS | chromosome | CDS | 2823854 | 564 | + | 0.501773 |
| srlB | b2704 | glucitol/sorbitol-specific enzyme IIA component of PTS | chromosome | CDS | 2825384 | 372 | + | 0.551075 |
| srlD | b2705 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2825759 | 780 | + | 0.533333 |
| srlE | b2703 | glucitol/sorbitol-specific enzyme IIB component of PTS | chromosome | CDS | 2824414 | 960 | + | 0.546875 |
| srlR | b2707 | DNA-bindng transcriptional repressor | chromosome | CDS | 2827069 | 774 | + | 0.488372 |
| srmB | b2576 | ATP-dependent RNA helicase | chromosome | CDS | 2710918 | 1335 | + | 0.547566 |
| sroF | b4441 | unknown RNA | chromosome | misc_RNA | 2689214 | 149 | - | 0.510067 |
| ssb | b4059 | single-strand DNA-binding protein | chromosome | CDS | 4272148 | 537 | + | 0.581006 |
| sseA | b2521 | 3-mercaptopyruvate sulfurtransferase | chromosome | CDS | 2650516 | 846 | + | 0.531915 |
| sseB | b2522 | rhodanase-like enzyme, sulfur transfer from thiosulfate | chromosome | CDS | 2652179 | 777 | - | 0.471042 |
| ssnA | b2879 | putative chlorohydrolase/aminohydrolase | chromosome | CDS | 3017183 | 1329 | + | 0.526712 |
| sspA | b3229 | stringent starvation protein A | chromosome | CDS | 3374804 | 639 | - | 0.536776 |
| sspB | b3228 | ClpXP protease specificity-enhancing factor | chromosome | CDS | 3374301 | 498 | - | 0.552209 |
| ssrA | b2621 | 10Sa RNA SsrA | chromosome | misc_RNA | 2753615 | 363 | + | 0.528926 |
| ssrS | b2911 | 6S regulatory RNA | chromosome | misc_RNA | 3054005 | 183 | + | 0.551913 |
| sstT | b3089 | sodium:serine/threonine symporter | chromosome | CDS | 3237966 | 1245 | + | 0.551807 |
| ssuA | b0936 | alkanesulfonate transporter subunit | chromosome | CDS | 995208 | 960 | - | 0.523958 |
| ssuB | b0933 | alkanesulfonate transporter subunit | chromosome | CDS | 992500 | 768 | - | 0.55599 |
| ssuC | b0934 | alkanesulfonate transporter subunit | chromosome | CDS | 993264 | 792 | - | 0.558081 |
| ssuD | b0935 | alkanesulfonate monooxygenase | chromosome | CDS | 994066 | 1146 | - | 0.569808 |
| ssuE | b0937 | NAD(P)H-dependent FMN reductase | chromosome | CDS | 996160 | 576 | - | 0.541667 |
| stfE | b1157 | e14 prophage; predicted side tail fiber protein fragment (pseudogene) | chromosome | CDS | 1208342 | 537 | - | 0.454376 |
| stfQ | b1547 | Qin prophage; predicted side tail fibre assembly protein | chromosome | CDS | 1632909 | 963 | - | 0.52648 |
| stfR | b1372 | Rac prophage; predicted tail fiber protein | chromosome | CDS | 1427073 | 3363 | + | 0.533452 |
| sthA | b3962 | soluble pyridine nucleotide transhydrogenase | chromosome | CDS | 4157413 | 1401 | - | 0.518201 |
| stpA | b2669 | DNA binding protein, nucleoid-associated | chromosome | CDS | 2796113 | 405 | - | 0.481481 |
| sucA | b0726 | alpha-ketoglutarate decarboxylase | chromosome | CDS | 757929 | 2802 | + | 0.556745 |
| sucB | b0727 | dihydrolipoamide acetyltransferase | chromosome | CDS | 760745 | 1218 | + | 0.559113 |
| sucC | b0728 | succinyl-CoA synthetase subunit beta | chromosome | CDS | 762237 | 1167 | + | 0.543273 |
| sucD | b0729 | succinyl-CoA synthetase subunit alpha | chromosome | CDS | 763403 | 870 | + | 0.537931 |
| sufA | b1684 | iron-sulfur cluster assembly scaffold protein | chromosome | CDS | 1762042 | 369 | - | 0.533875 |
| sufB | b1683 | component of SufBCD complex | chromosome | CDS | 1760546 | 1488 | - | 0.515457 |
| sufC | b1682 | cysteine desulfurase ATPase component | chromosome | CDS | 1759790 | 747 | - | 0.504685 |
| sufD | b1681 | component of SufBCD complex | chromosome | CDS | 1758544 | 1272 | - | 0.533019 |
| sufE | b1679 | cysteine desufuration protein SufE | chromosome | CDS | 1756898 | 417 | - | 0.486811 |
| sufI | b3017 | repressor protein for FtsI | chromosome | CDS | 3159279 | 1413 | - | 0.564048 |
| sufS | b1680 | selenocysteine lyase | chromosome | CDS | 1757327 | 1221 | - | 0.548731 |
| sugE | b4148 | multidrug efflux system protein | chromosome | CDS | 4374898 | 318 | + | 0.531447 |
| suhB | b2533 | inositol monophosphatase | chromosome | CDS | 2661464 | 804 | + | 0.544776 |
| sulA | b0958 | SOS cell division inhibitor | chromosome | CDS | 1019633 | 510 | - | 0.482353 |
| surA | b0053 | peptidyl-prolyl cis-trans isomerase (PPIase) | chromosome | CDS | 53416 | 1287 | - | 0.538462 |
| surE | b2744 | acid phosphatase | chromosome | CDS | 2867535 | 762 | - | 0.547244 |
| syd | b2793 | SecY interacting protein Syd | chromosome | CDS | 2922757 | 546 | - | 0.478022 |
| tadA | b2559 | tRNA-specific adenosine deaminase | chromosome | CDS | 2695376 | 537 | - | 0.541899 |
| tag | b3549 | 3-methyl-adenine DNA glycosylase I, constitutive | chromosome | CDS | 3711115 | 564 | + | 0.498227 |
| talA | b2464 | transaldolase A | chromosome | CDS | 2576688 | 951 | + | 0.502629 |
| talB | b0008 | transaldolase B | chromosome | CDS | 8238 | 954 | + | 0.519916 |
| tam | b1519 | trans-aconitate 2-methyltransferase | chromosome | CDS | 1605370 | 759 | + | 0.538867 |
| tap | b1885 | methyl-accepting protein IV | chromosome | CDS | 1967407 | 1602 | - | 0.535581 |
| tar | b1886 | methyl-accepting chemotaxis protein II | chromosome | CDS | 1969054 | 1662 | - | 0.527677 |
| tas | b2834 | predicted oxidoreductase, NADP(H)-dependent aldo-keto reductase | chromosome | CDS | 2969619 | 1041 | + | 0.543708 |
| tatA | b3836 | twin argininte translocase protein A | chromosome | CDS | 4019968 | 270 | + | 0.455556 |
| tatB | b3838 | sec-independent translocase | chromosome | CDS | 4020241 | 516 | + | 0.554264 |
| tatC | b3839 | TatABCE protein translocation system subunit | chromosome | CDS | 4020759 | 777 | + | 0.516088 |
| tatD | b4483 | DNase, magnesium-dependent | chromosome | CDS | 4021577 | 783 | + | 0.542784 |
| tatE | b0627 | twin arginine translocase protein E | chromosome | CDS | 658170 | 204 | + | 0.5 |
| tauA | b0365 | taurine transporter subunit | chromosome | CDS | 384456 | 963 | + | 0.562824 |
| tauB | b0366 | taurine transporter subunit | chromosome | CDS | 385431 | 768 | + | 0.559896 |
| tauC | b0367 | taurine transporter subunit | chromosome | CDS | 386195 | 828 | + | 0.572464 |
| tauD | b0368 | taurine dioxygenase | chromosome | CDS | 387019 | 852 | + | 0.544601 |
| tbpA | b0068 | thiamin transporter subunit | chromosome | CDS | 74497 | 984 | - | 0.53252 |
| tdcA | b3118 | DNA-binding transcriptional activator | chromosome | CDS | 3264149 | 939 | - | 0.421725 |
| tdcB | b3117 | threonine dehydratase | chromosome | CDS | 3263061 | 990 | - | 0.463636 |
| tdcC | b3116 | L-threonine/L-serine transporter | chromosome | CDS | 3261708 | 1332 | - | 0.498498 |
| tdcD | b3115 | propionate kinase/acetate kinase C, anaerobic | chromosome | CDS | 3260474 | 1221 | - | 0.481572 |
| tdcE | b3114 | pyruvate formate-lyase 4/2-ketobutyrate formate-lyase | chromosome | CDS | 3258146 | 2295 | - | 0.531155 |
| tdcF | b3113 | predicted L-PSP (mRNA) endoribonuclease | chromosome | CDS | 3257743 | 390 | - | 0.525641 |
| tdcG | b4471 | L-serine dehydratase 3 | chromosome | CDS | 3256307 | 1365 | - | 0.534066 |
| tdcR | b3119 | DNA-binding transcriptional activator | chromosome | CDS | 3265402 | 219 | + | 0.287671 |
| tdh | b3616 | L-threonine 3-dehydrogenase | chromosome | CDS | 3788343 | 1026 | - | 0.51462 |
| tdk | b1238 | thymidine kinase | chromosome | CDS | 1292750 | 618 | + | 0.42233 |
| tehA | b1429 | potassium-tellurite ethidium and proflavin transporter | chromosome | CDS | 1498597 | 993 | + | 0.531722 |
| tehB | b1430 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1499586 | 594 | + | 0.459596 |
| tesA | b0494 | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 | chromosome | CDS | 518363 | 627 | - | 0.527911 |
| tesB | b0452 | acyl-CoA thioesterase II | chromosome | CDS | 473525 | 861 | - | 0.524971 |
| tfaD | b0561 | DLP12 prophage; predicted tail fiber assembly protein (pseudogene) | chromosome | CDS | 580757 | 564 | + | 0.489362 |
| tfaE | b1156 | e14 prophage; predicted tail fiber assembly protein | chromosome | CDS | 1207740 | 603 | - | 0.477612 |
| tfaQ | b1546 | Qin prophage; predicted tail fibre assembly protein | chromosome | CDS | 1632334 | 576 | - | 0.482639 |
| tfaR | b1373 | Rac prophage; predicted tail fiber assembly protein | chromosome | CDS | 1430435 | 576 | + | 0.480903 |
| tfaS | b2353 | CPS-53 (KpLE1) prophage; tail fiber assembly protein fragment (pseudogene) | chromosome | CDS | 2468825 | 303 | + | 0.544554 |
| tff | b4414 | unknown RNA | chromosome | misc_RNA | 189712 | 136 | + | 0.507353 |
| tgt | b0406 | queuine tRNA-ribosyltransferase | chromosome | CDS | 425361 | 1128 | + | 0.513298 |
| thiC | b3994 | thiamine biosynthesis protein ThiC | chromosome | CDS | 4192227 | 1896 | - | 0.557489 |
| thiD | b2103 | phosphomethylpyrimidine kinase | chromosome | CDS | 2181738 | 801 | - | 0.554307 |
| thiE | b3993 | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 4191592 | 636 | - | 0.580189 |
| thiF | b3992 | thiamine biosynthesis protein ThiF | chromosome | CDS | 4190844 | 756 | - | 0.575397 |
| thiG | b3991 | thiazole synthase | chromosome | CDS | 4189888 | 771 | - | 0.584955 |
| thiH | b3990 | thiamine biosynthesis protein ThiH | chromosome | CDS | 4188758 | 1134 | - | 0.550265 |
| thiI | b0423 | thiamine biosynthesis protein ThiI | chromosome | CDS | 440773 | 1449 | + | 0.521739 |
| thiL | b0417 | thiamine monophosphate kinase | chromosome | CDS | 434858 | 978 | + | 0.543967 |
| thiM | b2104 | hydroxyethylthiazole kinase | chromosome | CDS | 2182535 | 789 | - | 0.541191 |
| thiP | b0067 | thiamin ABC transporter membrane protein | chromosome | CDS | 72911 | 1611 | - | 0.584109 |
| thiQ | b0066 | thiamin transporter subunit | chromosome | CDS | 72229 | 699 | - | 0.570815 |
| thiS | b4407 | sulfur carrier protein ThiS | chromosome | CDS | 4190660 | 201 | - | 0.557214 |
| thrA | b0002 | bifunctional aspartokinase I/homeserine dehydrogenase I | chromosome | CDS | 337 | 2463 | + | 0.530654 |
| thrB | b0003 | homoserine kinase | chromosome | CDS | 2801 | 933 | + | 0.562701 |
| thrC | b0004 | threonine synthase | chromosome | CDS | 3734 | 1287 | + | 0.528361 |
| thrL | b0001 | thr operon leader peptide | chromosome | CDS | 190 | 66 | + | 0.515152 |
| thrS | b1719 | threonyl-tRNA synthetase | chromosome | CDS | 1798666 | 1929 | - | 0.495594 |
| thrT | b3979 | tRNA-Thr | chromosome | tRNA | 4173777 | 76 | + | 0.539474 |
| thrU | b3976 | tRNA-Thr | chromosome | tRNA | 4173411 | 76 | + | 0.513158 |
| thrV | b3273 | tRNA-Thr | chromosome | tRNA | 3421602 | 76 | - | 0.565789 |
| thrW | b0244 | tRNA-Thr | chromosome | tRNA | 262095 | 76 | + | 0.513158 |
| thyA | b2827 | thymidylate synthase | chromosome | CDS | 2962383 | 795 | - | 0.510692 |
| tiaE | b3553 | 2-ketoaldonate reductase/glyoxylate reductase B | chromosome | CDS | 3715333 | 975 | + | 0.52 |
| tig | b0436 | trigger factor | chromosome | CDS | 454357 | 1299 | + | 0.511932 |
| tilS | b0188 | tRNA(Ile)-lysidine synthetase | chromosome | CDS | 212331 | 1299 | + | 0.580446 |
| tktA | b2935 | transketolase 1, thiamin-binding | chromosome | CDS | 3077666 | 1992 | - | 0.557229 |
| tktB | b2465 | transketolase 2, thiamin-binding | chromosome | CDS | 2577658 | 2004 | + | 0.546407 |
| tldD | b3244 | predicted peptidase | chromosome | CDS | 3388605 | 1446 | - | 0.545643 |
| tmk | b1098 | thymidylate kinase | chromosome | CDS | 1154347 | 642 | + | 0.540498 |
| tnaA | b3708 | tryptophanase/L-cysteine desulfhydrase, PLP-dependent | chromosome | CDS | 3886753 | 1416 | + | 0.508475 |
| tnaB | b3709 | tryptophan transporter of low affinity | chromosome | CDS | 3888259 | 1248 | + | 0.464744 |
| tnaC | b3707 | tryptophanase leader peptide | chromosome | CDS | 3886458 | 75 | + | 0.346667 |
| tolA | b0739 | cell envelope integrity inner membrane protein TolA | chromosome | CDS | 775565 | 1266 | + | 0.522907 |
| tolB | b0740 | translocation protein TolB precursor | chromosome | CDS | 776963 | 1293 | + | 0.531322 |
| tolC | b3035 | outer membrane channel precursor protein | chromosome | CDS | 3176137 | 1482 | + | 0.513495 |
| tolQ | b0737 | membrane spanning protein in TolA-TolQ-TolR complex | chromosome | CDS | 774376 | 693 | + | 0.50505 |
| tolR | b0738 | membrane spanning protein in TolA-TolQ-TolR complex | chromosome | CDS | 775072 | 429 | + | 0.517483 |
| tonB | b1252 | membrane spanning protein in TonB-ExbB-ExbD complex | chromosome | CDS | 1309113 | 720 | + | 0.544444 |
| topA | b1274 | DNA topoisomerase I | chromosome | CDS | 1329072 | 2598 | + | 0.517706 |
| topB | b1763 | DNA topoisomerase III | chromosome | CDS | 1843023 | 1962 | - | 0.551478 |
| torA | b0997 | trimethylamine N-oxide (TMAO) reductase I, catalytic subunit | chromosome | CDS | 1058479 | 2547 | + | 0.5532 |
| torC | b0996 | trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit | chromosome | CDS | 1057307 | 1173 | + | 0.512361 |
| torD | b0998 | chaperone protein TorD | chromosome | CDS | 1061022 | 600 | + | 0.533333 |
| torI | b4501 | response regulator inhibitor for tor operon | chromosome | CDS | 2474332 | 201 | + | 0.437811 |
| torR | b0995 | DNA-binding response regulator in two-component regulatory system with TorS | chromosome | CDS | 1056485 | 693 | - | 0.52381 |
| torS | b0993 | hybrid sensory histidine kinase in two-component regulatory system with TorR | chromosome | CDS | 1052657 | 2745 | - | 0.537705 |
| torT | b0994 | periplasmic sensory protein associated with the TorRS two-component regulatory system | chromosome | CDS | 1055484 | 1029 | + | 0.5345 |
| torY | b1873 | TMAO reductase III (TorYZ), cytochrome c-type subunit | chromosome | CDS | 1955056 | 1101 | - | 0.474114 |
| torZ | b1872 | trimethylamine N-oxide reductase system III, catalytic subunit | chromosome | CDS | 1952602 | 2430 | - | 0.513169 |
| tpiA | b3919 | triosephosphate isomerase | chromosome | CDS | 4108763 | 768 | - | 0.526042 |
| tppB | b1634 | putative tripeptide transporter permease | chromosome | CDS | 1710793 | 1503 | + | 0.516301 |
| tpr | b1229 | predicted protamine-like protein | chromosome | CDS | 1286310 | 102 | - | 0.647059 |
| tpx | b1324 | thiol peroxidase | chromosome | CDS | 1386329 | 507 | - | 0.512821 |
| treA | b1197 | periplasmic trehalase | chromosome | CDS | 1244902 | 1698 | - | 0.522968 |
| treB | b4240 | fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component | chromosome | CDS | 4462782 | 1422 | - | 0.543601 |
| treC | b4239 | trehalose-6-P hydrolase | chromosome | CDS | 4461077 | 1656 | - | 0.530797 |
| treF | b3519 | cytoplasmic trehalase | chromosome | CDS | 3667615 | 1650 | + | 0.539394 |
| treR | b4241 | trehalose repressor | chromosome | CDS | 4464322 | 948 | - | 0.537975 |
| trg | b1421 | methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor | chromosome | CDS | 1490494 | 1641 | + | 0.512492 |
| trkA | b3290 | potassium transporter peripheral membrane component | chromosome | CDS | 3434540 | 1377 | + | 0.501089 |
| trkD | b3747 | potassium transporter | chromosome | CDS | 3929339 | 1869 | + | 0.514179 |
| trkG | b1363 | Rac prophage; potassium transporter subunit | chromosome | CDS | 1421806 | 1458 | + | 0.380658 |
| trkH | b3849 | potassium transporter | chromosome | CDS | 4031168 | 1452 | + | 0.530992 |
| trmA | b3965 | tRNA (uracil-5-)-methyltransferase | chromosome | CDS | 4160193 | 1101 | - | 0.508629 |
| trmC | b2324 | hypothetical protein | chromosome | CDS | 2439786 | 2007 | + | 0.52865 |
| trmD | b2607 | tRNA (guanine-N(1)-)-methyltransferase | chromosome | CDS | 2742594 | 768 | - | 0.533854 |
| trmE | b3706 | tRNA modification GTPase | chromosome | CDS | 3884851 | 1365 | + | 0.56337 |
| trmH | b3651 | tRNA (Guanosine-2'-O-)-methyltransferase | chromosome | CDS | 3822538 | 690 | + | 0.553623 |
| trmU | b1133 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 1191890 | 1107 | - | 0.537489 |
| trpA | b1260 | tryptophan synthase subunit alpha | chromosome | CDS | 1314440 | 807 | - | 0.535316 |
| trpB | b1261 | tryptophan synthase subunit beta | chromosome | CDS | 1315246 | 1194 | - | 0.546901 |
| trpC | b1262 | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | chromosome | CDS | 1316451 | 1359 | - | 0.52833 |
| trpD | b1263 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase | chromosome | CDS | 1317813 | 1596 | - | 0.56391 |
| trpE | b1264 | anthranilate synthase component I | chromosome | CDS | 1319408 | 1563 | - | 0.543826 |
| trpL | b1265 | trp operon leader peptide | chromosome | CDS | 1321062 | 45 | - | 0.444444 |
| trpR | b4393 | Trp operon repressor | chromosome | CDS | 4630783 | 327 | + | 0.541284 |
| trpS | b3384 | tryptophanyl-tRNA synthetase | chromosome | CDS | 3510656 | 1005 | - | 0.520398 |
| trpT | b3761 | tRNA-Trp | chromosome | tRNA | 3944980 | 76 | + | 0.592105 |
| truA | b2318 | tRNA pseudouridine synthase A | chromosome | CDS | 2432846 | 813 | - | 0.553506 |
| truB | b3166 | tRNA pseudouridine synthase B | chromosome | CDS | 3309855 | 945 | - | 0.524868 |
| truD | b2745 | tRNA pseudouridine synthase D | chromosome | CDS | 2868277 | 1050 | - | 0.521905 |
| trxA | b3781 | thioredoxin | chromosome | CDS | 3963784 | 330 | + | 0.509091 |
| trxB | b0888 | thioredoxin reductase, FAD/NAD(P)-binding | chromosome | CDS | 930308 | 966 | - | 0.536232 |
| trxC | b2582 | thioredoxin 2 | chromosome | CDS | 2716757 | 420 | + | 0.495238 |
| tsf | b0170 | elongation factor Ts | chromosome | CDS | 190857 | 852 | + | 0.498826 |
| tsgA | b3364 | hypothetical protein | chromosome | CDS | 3490590 | 1182 | + | 0.518613 |
| tsr | b4355 | methyl-accepting chemotaxis protein I, serine sensor receptor | chromosome | CDS | 4589680 | 1656 | + | 0.546498 |
| tsx | b0411 | nucleoside channel, receptor of phage T6 and colicin K | chromosome | CDS | 430353 | 885 | - | 0.505085 |
| ttdA | b3061 | tartrate dehydratase | chromosome | CDS | 3204485 | 912 | + | 0.538377 |
| ttdB | b3062 | L(+)-tartrate dehydratase | chromosome | CDS | 3205393 | 606 | + | 0.539604 |
| ttk | b3641 | nucleoid occlusion protein | chromosome | CDS | 3812517 | 597 | + | 0.530988 |
| tufA | b3339 | protein chain elongation factor EF-Tu (duplicate of tufB) | chromosome | CDS | 3468167 | 1185 | - | 0.532489 |
| tufB | b3980 | protein chain elongation factor EF-Tu (duplicate of tufA) | chromosome | CDS | 4173967 | 1185 | + | 0.534177 |
| tus | b1610 | DNA replication terminus site-binding protein | chromosome | CDS | 1682283 | 930 | + | 0.507527 |
| tynA | b1386 | tyramine oxidase, copper-requiring | chromosome | CDS | 1447100 | 2274 | - | 0.506157 |
| tyrA | b2600 | fused chorismate mutase T/prephenate dehydrogenase | chromosome | CDS | 2736970 | 1122 | - | 0.523173 |
| tyrB | b4054 | tyrosine aminotransferase, tyrosine-repressible, PLP-dependent | chromosome | CDS | 4265137 | 1194 | + | 0.527638 |
| tyrP | b1907 | tyrosine transporter | chromosome | CDS | 1987705 | 1212 | + | 0.512376 |
| tyrR | b1323 | DNA-binding transcriptional dual regulator, tyrosine-binding | chromosome | CDS | 1384744 | 1542 | + | 0.521401 |
| tyrS | b1637 | tyrosyl-tRNA synthetase | chromosome | CDS | 1713972 | 1275 | - | 0.515294 |
| tyrT | b1231 | tRNA-Tyr | chromosome | tRNA | 1286761 | 85 | - | 0.588235 |
| tyrU | b3977 | tRNA-Tyr | chromosome | tRNA | 4173495 | 85 | + | 0.588235 |
| tyrV | b1230 | tRNA-Tyr | chromosome | tRNA | 1286467 | 85 | - | 0.588235 |
| ubiA | b4040 | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 4251039 | 873 | + | 0.517755 |
| ubiB | b3835 | putative ubiquinone biosynthesis protein UbiB | chromosome | CDS | 4018249 | 1641 | + | 0.499695 |
| ubiC | b4039 | chorismate pyruvate lyase | chromosome | CDS | 4250529 | 498 | + | 0.528112 |
| ubiD | b3843 | 3-octaprenyl-4-hydroxybenzoate decarboxylase | chromosome | CDS | 4023011 | 1494 | + | 0.538153 |
| ubiE | b3833 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 4016878 | 756 | + | 0.521164 |
| ubiF | b0662 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | chromosome | CDS | 694324 | 1176 | + | 0.571429 |
| ubiG | b2232 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 2337589 | 723 | + | 0.542185 |
| ubiH | b2907 | 2-octaprenyl-6-methoxyphenyl hydroxylase | chromosome | CDS | 3050362 | 1179 | - | 0.59542 |
| ubiX | b2311 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 2426079 | 570 | - | 0.531579 |
| ucpA | b2426 | short chain dehydrogenase | chromosome | CDS | 2541854 | 792 | - | 0.55303 |
| udk | b2066 | uridine kinase | chromosome | CDS | 2140331 | 642 | - | 0.487539 |
| udp | b3831 | uridine phosphorylase | chromosome | CDS | 4014454 | 762 | + | 0.540682 |
| ugd | b2028 | UDP-glucose 6-dehydrogenase | chromosome | CDS | 2096471 | 1167 | - | 0.437875 |
| ugpA | b3452 | glycerol-3-phosphate transporter subunit | chromosome | CDS | 3588047 | 888 | - | 0.558559 |
| ugpB | b3453 | glycerol-3-phosphate transporter subunit | chromosome | CDS | 3589032 | 1317 | - | 0.536826 |
| ugpC | b3450 | glycerol-3-phosphate transporter subunit | chromosome | CDS | 3586133 | 1071 | - | 0.577031 |
| ugpE | b3451 | glycerol-3-phosphate transporter subunit | chromosome | CDS | 3587205 | 846 | - | 0.543735 |
| ugpQ | b3449 | cytoplasmic glycerophosphodiester phosphodiesterase | chromosome | CDS | 3585393 | 744 | - | 0.564516 |
| uhpA | b3669 | DNA-binding response regulator in two-component regulatory system wtih UhpB | chromosome | CDS | 3848159 | 591 | - | 0.588832 |
| uhpB | b3668 | sensory histidine kinase in two-component regulatory sytem with UhpA | chromosome | CDS | 3846657 | 1503 | - | 0.570858 |
| uhpC | b3667 | membrane protein regulates uhpT expression | chromosome | CDS | 3845328 | 1320 | - | 0.55 |
| uhpT | b3666 | sugar phosphate antiporter | chromosome | CDS | 3843799 | 1392 | - | 0.528736 |
| uidA | b1617 | beta-D-glucuronidase | chromosome | CDS | 1692284 | 1812 | - | 0.522627 |
| uidB | b1616 | glucuronide transporter | chromosome | CDS | 1690914 | 1374 | - | 0.518195 |
| uidC | b1615 | predicted outer membrane porin protein | chromosome | CDS | 1689610 | 1266 | - | 0.471564 |
| uidR | b1618 | DNA-binding transcriptional repressor | chromosome | CDS | 1694486 | 591 | - | 0.509306 |
| ulaA | b4193 | ascorbate-specific PTS system enzyme IIC | chromosome | CDS | 4418003 | 1398 | + | 0.530758 |
| ulaB | b4194 | L-ascorbate-specific enzyme IIB component of PTS | chromosome | CDS | 4419416 | 306 | + | 0.506536 |
| ulaC | b4195 | L-ascorbate-specific enzyme IIA component of PTS | chromosome | CDS | 4419731 | 465 | + | 0.539785 |
| ulaD | b4196 | 3-keto-L-gulonate 6-phosphate decarboxylase | chromosome | CDS | 4420209 | 651 | + | 0.571429 |
| ulaE | b4197 | L-xylulose 5-phosphate 3-epimerase | chromosome | CDS | 4420869 | 855 | + | 0.567251 |
| ulaF | b4198 | L-ribulose 5-phosphate 4-epimerase | chromosome | CDS | 4421723 | 687 | + | 0.572052 |
| ulaG | b4192 | predicted L-ascorbate 6-phosphate lactonase | chromosome | CDS | 4416584 | 1065 | - | 0.522066 |
| ulaR | b4191 | DNA-binding transcriptional dual regulator | chromosome | CDS | 4415721 | 756 | - | 0.506614 |
| umuC | b1184 | DNA polymerase V subunit UmuC | chromosome | CDS | 1230409 | 1269 | + | 0.50985 |
| umuD | b1183 | DNA polymerase V, subunit D | chromosome | CDS | 1229990 | 420 | + | 0.480952 |
| ung | b2580 | uracil-DNA glycosylase | chromosome | CDS | 2714776 | 690 | + | 0.521739 |
| upp | b2498 | uracil phosphoribosyltransferase | chromosome | CDS | 2618268 | 627 | - | 0.529506 |
| uraA | b2497 | uracil transporter | chromosome | CDS | 2616893 | 1290 | - | 0.51938 |
| usg | b2319 | hypothetical protein | chromosome | CDS | 2433658 | 1014 | - | 0.54931 |
| ushA | b0480 | UDP-sugar hydrolase | chromosome | CDS | 504138 | 1653 | + | 0.508772 |
| uspA | b3495 | universal stress global response regulator | chromosome | CDS | 3638134 | 435 | + | 0.491954 |
| uspE | b1333 | stress-induced protein | chromosome | CDS | 1395696 | 951 | - | 0.505783 |
| uspF | b1376 | stress-induced protein, ATP-binding protein | chromosome | CDS | 1433209 | 435 | - | 0.485057 |
| uspG | b0607 | universal stress protein UP12 | chromosome | CDS | 640662 | 429 | - | 0.498834 |
| uup | b0949 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 1009187 | 1908 | + | 0.524109 |
| uvrA | b4058 | excinuclease ABC subunit A | chromosome | CDS | 4269072 | 2823 | - | 0.560751 |
| uvrB | b0779 | excinuclease ABC subunit B | chromosome | CDS | 812749 | 2022 | + | 0.535608 |
| uvrC | b1913 | excinuclease ABC subunit C | chromosome | CDS | 1990898 | 1833 | - | 0.517185 |
| uvrD | b3813 | DNA-dependent ATPase I and helicase II | chromosome | CDS | 3996006 | 2163 | + | 0.576976 |
| uvrY | b1914 | response regulator | chromosome | CDS | 1992727 | 657 | - | 0.497717 |
| uxaA | b3091 | altronate hydrolase | chromosome | CDS | 3239849 | 1488 | - | 0.536962 |
| uxaB | b1521 | tagaturonate reductase | chromosome | CDS | 1607253 | 1452 | - | 0.519972 |
| uxaC | b3092 | glucuronate isomerase | chromosome | CDS | 3241351 | 1413 | - | 0.542817 |
| uxuA | b4322 | mannonate dehydratase | chromosome | CDS | 4549659 | 1185 | + | 0.54346 |
| uxuB | b4323 | D-mannonate oxidoreductase, NAD-binding | chromosome | CDS | 4550924 | 1461 | + | 0.576318 |
| uxuR | b4324 | DNA-binding transcriptional repressor | chromosome | CDS | 4552599 | 774 | + | 0.536176 |
| vacJ | b2346 | predicted lipoprotein | chromosome | CDS | 2462274 | 756 | - | 0.518519 |
| valS | b4258 | valyl-tRNA synthetase | chromosome | CDS | 4479005 | 2856 | - | 0.545868 |
| valT | b0744 | tRNA-Val | chromosome | tRNA | 779988 | 76 | + | 0.618421 |
| valU | b2401 | tRNA-Val | chromosome | tRNA | 2518953 | 76 | + | 0.618421 |
| valV | b1665 | tRNA-Val | chromosome | tRNA | 1744459 | 77 | + | 0.532468 |
| valW | b1666 | tRNA-Val | chromosome | tRNA | 1744540 | 77 | + | 0.61039 |
| valX | b2402 | tRNA-Val | chromosome | tRNA | 2519073 | 76 | + | 0.618421 |
| valY | b2403 | tRNA-Val | chromosome | tRNA | 2519195 | 76 | + | 0.618421 |
| valZ | b0746 | tRNA-Val | chromosome | tRNA | 780291 | 76 | + | 0.618421 |
| visC | b2906 | hypothetical protein | chromosome | CDS | 3049137 | 1203 | - | 0.54946 |
| vsr | b1960 | DNA mismatch endonuclease of very short patch repair | chromosome | CDS | 2028472 | 471 | - | 0.56051 |
| wbbH | b2035 | O-antigen polymerase | chromosome | CDS | 2104084 | 1167 | - | 0.323051 |
| wbbI | b2034 | hypothetical protein | chromosome | CDS | 2103089 | 993 | - | 0.359517 |
| wbbJ | b2033 | predicted acyl transferase | chromosome | CDS | 2102518 | 591 | - | 0.406091 |
| wbbK | b2032 | lipopolysaccharide biosynthesis protein | chromosome | CDS | 2101415 | 1119 | - | 0.319035 |
| wbbL | b4571 | chromosome | pseudo | 2099420 | 1994 | - | 0.45988 | |
| wbbL | b4571 | chromosome | pseudo | 2099420 | 1994 | - | 0.45988 | |
| wbbL_1 | b2031 | chromosome | pseudo | 2100940 | 474 | - | 0.35443 | |
| wbbL_2 | b4540 | chromosome | pseudo | 2099420 | 282 | - | 0.37234 | |
| wcaA | b2059 | predicted glycosyl transferase | chromosome | CDS | 2130582 | 840 | - | 0.515476 |
| wcaB | b2058 | predicted acyl transferase | chromosome | CDS | 2130091 | 489 | - | 0.539877 |
| wcaC | b2057 | predicted glycosyl transferase | chromosome | CDS | 2128877 | 1218 | - | 0.536125 |
| wcaD | b2056 | predicted colanic acid polymerase | chromosome | CDS | 2127685 | 1218 | - | 0.420361 |
| wcaE | b2055 | predicted glycosyl transferase | chromosome | CDS | 2126928 | 747 | - | 0.455154 |
| wcaF | b2054 | predicted acyl transferase | chromosome | CDS | 2126364 | 549 | - | 0.479053 |
| wcaI | b2050 | predicted glycosyl transferase | chromosome | CDS | 2122547 | 1224 | - | 0.555556 |
| wcaJ | b2047 | predicted UDP-glucose lipid carrier transferase | chromosome | CDS | 2118184 | 1395 | - | 0.546237 |
| wcaK | b2045 | predicted pyruvyl transferase | chromosome | CDS | 2115148 | 1281 | - | 0.543326 |
| wcaL | b2044 | predicted glycosyl transferase | chromosome | CDS | 2113931 | 1221 | - | 0.548731 |
| wcaM | b2043 | predicted colanic acid biosynthesis protein | chromosome | CDS | 2112526 | 1395 | - | 0.470968 |
| wrbA | b1004 | TrpR binding protein WrbA | chromosome | CDS | 1066335 | 597 | - | 0.539364 |
| wza | b2062 | lipoprotein required for capsular polysaccharide translocation through the outer membrane | chromosome | CDS | 2134128 | 1140 | - | 0.537719 |
| wzb | b2061 | protein-tyrosine phosphatase | chromosome | CDS | 2133679 | 444 | - | 0.545045 |
| wzc | b2060 | protein-tyrosine kinase | chromosome | CDS | 2131514 | 2163 | - | 0.526583 |
| wzxC | b2046 | colanic acid exporter | chromosome | CDS | 2116704 | 1479 | - | 0.540906 |
| wzxE | b3792 | O-antigen translocase | chromosome | CDS | 3974301 | 1251 | + | 0.536371 |
| wzyE | b3793 | putative enterobacterial common antigen polymerase | chromosome | CDS | 3976624 | 1353 | + | 0.524021 |
| wzzE | b3785 | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein | chromosome | CDS | 3967054 | 1047 | + | 0.527221 |
| xapA | b2407 | purine nucleoside phosphorylase | chromosome | CDS | 2522067 | 834 | - | 0.516787 |
| xapB | b2406 | xanthosine transporter | chromosome | CDS | 2520751 | 1257 | - | 0.480509 |
| xapR | b2405 | DNA-binding transcriptional activator | chromosome | CDS | 2519615 | 885 | - | 0.505085 |
| xdhA | b2866 | xanthine dehydrogenase, molybdenum binding subunit | chromosome | CDS | 2998367 | 2259 | + | 0.52988 |
| xdhB | b2867 | xanthine dehydrogenase, FAD-binding subunit | chromosome | CDS | 3000636 | 879 | + | 0.536974 |
| xdhC | b2868 | xanthine dehydrogenase, Fe-S binding subunit | chromosome | CDS | 3001511 | 480 | + | 0.520833 |
| xdhD | b2881 | fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit/Fe-S binding subunit | chromosome | CDS | 3019338 | 2871 | + | 0.529432 |
| xerC | b3811 | site-specific tyrosine recombinase XerC | chromosome | CDS | 3994310 | 897 | + | 0.539576 |
| xerD | b2894 | site-specific tyrosine recombinase XerD | chromosome | CDS | 3036869 | 897 | - | 0.530658 |
| xseA | b2509 | exodeoxyribonuclease VII large subunit | chromosome | CDS | 2632254 | 1371 | + | 0.532458 |
| xseB | b0422 | exodeoxyribonuclease VII small subunit | chromosome | CDS | 440325 | 243 | - | 0.55144 |
| xthA | b1749 | exonuclease III | chromosome | CDS | 1830452 | 807 | + | 0.534077 |
| xylA | b3565 | xylose isomerase | chromosome | CDS | 3727466 | 1323 | - | 0.508692 |
| xylB | b3564 | xylulokinase | chromosome | CDS | 3725940 | 1455 | - | 0.547766 |
| xylE | b4031 | D-xylose transporter | chromosome | CDS | 4238802 | 1476 | - | 0.495935 |
| xylF | b3566 | D-xylose transporter subunit | chromosome | CDS | 3729154 | 993 | + | 0.440081 |
| xylG | b3567 | fused D-xylose transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 3730224 | 1542 | + | 0.470817 |
| xylH | b3568 | D-xylose transporter subunit | chromosome | CDS | 3731743 | 1182 | + | 0.538917 |
| xylR | b3569 | DNA-binding transcriptional activator, xylose-binding | chromosome | CDS | 3733002 | 1179 | + | 0.487701 |
| yaaA | b0006 | hypothetical protein | chromosome | CDS | 5683 | 777 | - | 0.496783 |
| yaaH | b0010 | conserved inner membrane protein associated with acetate transport | chromosome | CDS | 9928 | 567 | - | 0.530864 |
| yaaI | b0013 | hypothetical protein | chromosome | CDS | 11382 | 405 | - | 0.488889 |
| yaaJ | b0007 | predicted transporter | chromosome | CDS | 6529 | 1431 | - | 0.533194 |
| yaaU | b0045 | predicted transporter | chromosome | CDS | 45807 | 1332 | + | 0.533033 |
| yaaW | b0011 | hypothetical protein | chromosome | CDS | 10643 | 714 | - | 0.508403 |
| yaaX | b0005 | hypothetical protein | chromosome | CDS | 5234 | 297 | + | 0.538721 |
| yaaY | b0024 | hypothetical protein | chromosome | CDS | 21181 | 219 | + | 0.488584 |
| yabI | b0065 | conserved inner membrane protein | chromosome | CDS | 71351 | 765 | + | 0.538562 |
| yabP | b0056 | hypothetical protein | chromosome | CDS | 58474 | 651 | + | 0.451613 |
| yabQ | b0057 | hypothetical protein | chromosome | CDS | 59121 | 159 | + | 0.339623 |
| yacC | b0122 | hypothetical protein | chromosome | CDS | 136570 | 348 | - | 0.5 |
| yacF | b0102 | hypothetical protein | chromosome | CDS | 111856 | 744 | - | 0.514785 |
| yacG | b0101 | zinc-binding protein | chromosome | CDS | 111649 | 198 | - | 0.515152 |
| yacH | b0117 | hypothetical protein | chromosome | CDS | 129407 | 1854 | - | 0.538835 |
| yacL | b0119 | hypothetical protein | chromosome | CDS | 134388 | 363 | + | 0.520661 |
| yadB | b0144 | glutamyl-Q tRNA(Asp) synthetase | chromosome | CDS | 159186 | 927 | - | 0.536138 |
| yadC | b0135 | predicted fimbrial-like adhesin protein | chromosome | CDS | 149715 | 1239 | - | 0.403551 |
| yadD | b0132 | predicted transposase | chromosome | CDS | 146968 | 903 | + | 0.488372 |
| yadE | b0130 | predicted polysaccharide deacetylase lipoprotein | chromosome | CDS | 145081 | 1230 | + | 0.495122 |
| yadG | b0127 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 142779 | 927 | + | 0.496224 |
| yadH | b0128 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 143702 | 771 | + | 0.507134 |
| yadI | b0129 | predicted PTS Enzyme IIA | chromosome | CDS | 144577 | 441 | + | 0.492063 |
| yadK | b0136 | predicted fimbrial-like adhesin protein | chromosome | CDS | 151003 | 597 | - | 0.413735 |
| yadL | b0137 | predicted fimbrial-like adhesin protein | chromosome | CDS | 151626 | 606 | - | 0.425743 |
| yadM | b0138 | predicted fimbrial-like adhesin protein | chromosome | CDS | 152243 | 570 | - | 0.42807 |
| yadN | b0141 | predicted fimbrial-like adhesin protein | chromosome | CDS | 156299 | 585 | - | 0.447863 |
| yadR | b0156 | hypothetical protein | chromosome | CDS | 176610 | 345 | + | 0.507246 |
| yadS | b0157 | conserved inner membrane protein | chromosome | CDS | 177001 | 624 | - | 0.536859 |
| yaeB | b0195 | hypothetical protein | chromosome | CDS | 218887 | 708 | - | 0.55226 |
| yaeF | b0193 | predicted lipoprotein | chromosome | CDS | 216179 | 825 | - | 0.493333 |
| yaeH | b0163 | hypothetical protein | chromosome | CDS | 183709 | 387 | - | 0.444444 |
| yaeI | b0164 | predicted phosphatase | chromosome | CDS | 184257 | 813 | - | 0.514145 |
| yaeJ | b0191 | hypothetical protein | chromosome | CDS | 214833 | 423 | + | 0.541371 |
| yaeL | b0176 | zinc metallopeptidase | chromosome | CDS | 196546 | 1353 | + | 0.509239 |
| yaeP | b4406 | hypothetical protein | chromosome | CDS | 213925 | 201 | - | 0.507463 |
| yaeQ | b0190 | hypothetical protein | chromosome | CDS | 214291 | 546 | + | 0.52381 |
| yaeR | b0187 | predicted lyase | chromosome | CDS | 211877 | 390 | + | 0.505128 |
| yaeT | b0177 | hypothetical protein | chromosome | CDS | 197928 | 2433 | + | 0.506782 |
| yafC | b0208 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 229967 | 915 | - | 0.496175 |
| yafD | b0209 | hypothetical protein | chromosome | CDS | 231122 | 801 | + | 0.526841 |
| yafE | b0210 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 231926 | 624 | + | 0.490385 |
| yafF | b4503 | chromosome | pseudo | 239190 | 189 | + | 0.444444 | |
| yafF | b4503 | chromosome | pseudo | 239190 | 189 | + | 0.444444 | |
| yafJ | b0223 | predicted amidotransfease | chromosome | CDS | 244327 | 768 | + | 0.536458 |
| yafK | b0224 | hypothetical protein | chromosome | CDS | 245065 | 741 | - | 0.48448 |
| yafL | b0227 | predicted lipoprotein and C40 family peptidase | chromosome | CDS | 246712 | 750 | + | 0.524 |
| yafM | b0228 | hypothetical protein | chromosome | CDS | 247637 | 498 | + | 0.447791 |
| yafN | b0232 | predicted antitoxin of the YafO-YafN toxin-antitoxin system | chromosome | CDS | 252005 | 294 | + | 0.421769 |
| yafO | b0233 | predicted toxin of the YafO-YafN toxin-antitoxin system | chromosome | CDS | 252301 | 399 | + | 0.43609 |
| yafP | b0234 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 252709 | 453 | + | 0.432671 |
| yafQ | b0225 | predicted toxin of the YafQ-DinJ toxin-antitoxin system | chromosome | CDS | 245961 | 279 | - | 0.394265 |
| yafS | b0213 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 234816 | 723 | + | 0.493776 |
| yafT | b0217 | predicted aminopeptidase | chromosome | CDS | 237335 | 786 | + | 0.427481 |
| yafU | b0218 | predicted inner membrane protein | chromosome | CDS | 238746 | 339 | - | 0.39233 |
| yafV | b0219 | predicted C-N hydrolase family amidase, NAD(P)-binding | chromosome | CDS | 239419 | 771 | - | 0.547341 |
| yafW | b0246 | CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system | chromosome | CDS | 262914 | 318 | - | 0.569182 |
| yafX | b0248 | CP4-6 prophage; predicted protein | chromosome | CDS | 263972 | 459 | - | 0.555556 |
| yafY | b0251 | CP4-6 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 265334 | 858 | - | 0.536131 |
| yafZ | b0252 | CP4-6 prophage; conserved protein | chromosome | CDS | 266408 | 822 | - | 0.577859 |
| yagA | b0267 | CP4-6 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 280053 | 1155 | - | 0.620779 |
| yagB | b0266 | CP4-6 prophage; conserved protein | chromosome | CDS | 279609 | 351 | - | 0.509971 |
| yagE | b0268 | CP4-6 prophage; predicted lyase/synthase | chromosome | CDS | 281481 | 930 | + | 0.611828 |
| yagF | b0269 | CP4-6 prophage; predicted dehydratase | chromosome | CDS | 282425 | 1968 | + | 0.667175 |
| yagG | b0270 | CP4-6 prophage; predicted sugar transporter | chromosome | CDS | 284619 | 1383 | + | 0.624729 |
| yagH | b0271 | CP4-6 prophage; predicted xylosidase/arabinosidase | chromosome | CDS | 286013 | 1611 | + | 0.6437 |
| yagI | b0272 | CP4-6 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 287628 | 759 | - | 0.632411 |
| yagJ | b0276 | CP4-6 prophage; predicted protein | chromosome | CDS | 290724 | 732 | + | 0.489071 |
| yagK | b0277 | CP4-6 prophage; conserved protein | chromosome | CDS | 291546 | 627 | - | 0.448166 |
| yagL | b0278 | CP4-6 prophage; DNA-binding protein | chromosome | CDS | 292444 | 699 | - | 0.373391 |
| yagM | b0279 | CP4-6 prophage; predicted protein | chromosome | CDS | 293169 | 855 | - | 0.362573 |
| yagN | b0280 | CP4-6 prophage; predicted protein | chromosome | CDS | 294363 | 441 | - | 0.435374 |
| yagP | b0282 | predicted transcriptional regulator | chromosome | CDS | 296605 | 411 | - | 0.525547 |
| yagQ | b0283 | hypothetical protein | chromosome | CDS | 296994 | 957 | - | 0.599791 |
| yagR | b0284 | predicted oxidoreductase with molybdenum-binding domain | chromosome | CDS | 297960 | 2199 | - | 0.594361 |
| yagS | b0285 | predicted oxidoreductase with FAD-binding domain | chromosome | CDS | 300155 | 957 | - | 0.607106 |
| yagT | b0286 | predicted xanthine dehydrogenase, 2Fe-2S subunit | chromosome | CDS | 301108 | 690 | - | 0.547826 |
| yagU | b0287 | conserved inner membrane protein | chromosome | CDS | 302215 | 615 | + | 0.452033 |
| yagV | b0289 | hypothetical protein | chromosome | CDS | 303719 | 711 | - | 0.530239 |
| yagW | b0290 | predicted receptor | chromosome | CDS | 304398 | 1644 | - | 0.515815 |
| yagX | b0291 | predicted aromatic compound dioxygenase | chromosome | CDS | 306031 | 2526 | - | 0.552652 |
| yagY | b0292 | hypothetical protein | chromosome | CDS | 308582 | 669 | - | 0.54858 |
| yagZ | b0293 | hypothetical protein | chromosome | CDS | 309308 | 588 | - | 0.528912 |
| yahA | b0315 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 331595 | 1089 | + | 0.459137 |
| yahB | b0316 | predicted DNA-bindng transcriptional regulator | chromosome | CDS | 332725 | 933 | - | 0.493033 |
| yahC | b0317 | predicted inner membrane protein | chromosome | CDS | 333749 | 498 | - | 0.528112 |
| yahD | b0318 | predicted transcriptional regulator with ankyrin domain | chromosome | CDS | 334504 | 606 | + | 0.453795 |
| yahE | b0319 | hypothetical protein | chromosome | CDS | 335149 | 864 | + | 0.471065 |
| yahF | b0320 | predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain | chromosome | CDS | 336002 | 1548 | + | 0.555556 |
| yahG | b0321 | hypothetical protein | chromosome | CDS | 337549 | 1419 | + | 0.58351 |
| yahH | b0322 | hypothetical protein | chromosome | CDS | 339017 | 297 | + | 0.575758 |
| yahI | b0323 | predicted carbamate kinase-like protein | chromosome | CDS | 339389 | 951 | + | 0.561514 |
| yahJ | b0324 | deaminase | chromosome | CDS | 340349 | 1383 | + | 0.562545 |
| yahK | b0325 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 342108 | 1050 | + | 0.533333 |
| yahL | b0326 | hypothetical protein | chromosome | CDS | 343400 | 816 | + | 0.38848 |
| yahM | b0327 | hypothetical protein | chromosome | CDS | 344628 | 246 | + | 0.46748 |
| yahN | b0328 | neutral amino-acid efflux system | chromosome | CDS | 344890 | 672 | - | 0.494048 |
| yahO | b0329 | hypothetical protein | chromosome | CDS | 345708 | 276 | + | 0.387681 |
| yaiA | b0389 | hypothetical protein | chromosome | CDS | 406203 | 192 | + | 0.484375 |
| yaiB | b0382 | hypothetical protein | chromosome | CDS | 400610 | 261 | + | 0.463602 |
| yaiC | b0385 | predicted diguanylate cyclase | chromosome | CDS | 402927 | 1116 | + | 0.536738 |
| yaiE | b0391 | hypothetical protein | chromosome | CDS | 407401 | 285 | + | 0.519298 |
| yaiI | b0387 | hypothetical protein | chromosome | CDS | 404988 | 459 | + | 0.56427 |
| yaiL | b0354 | nucleoprotein/polynucleotide-associated enzyme | chromosome | CDS | 375996 | 540 | + | 0.481481 |
| yaiO | b0358 | hypothetical protein | chromosome | CDS | 379293 | 774 | - | 0.501292 |
| yaiP | b0363 | predicted glucosyltransferase | chromosome | CDS | 381963 | 1197 | - | 0.499582 |
| yaiS | b0364 | hypothetical protein | chromosome | CDS | 383283 | 558 | - | 0.433692 |
| yaiT | b4580 | chromosome | pseudo | 389475 | 4168 | + | 0.477927 | |
| yaiT | b4580 | chromosome | pseudo | 389475 | 4168 | + | 0.477927 | |
| yaiT_1 | b0371 | chromosome | pseudo | 389475 | 1461 | + | 0.409309 | |
| yaiT_2 | b0374 | chromosome | pseudo | 392239 | 1404 | + | 0.497863 | |
| yaiV | b0375 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 393685 | 669 | + | 0.403587 |
| yaiW | b0378 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 397096 | 1095 | + | 0.534247 |
| yaiX | b4579 | chromosome | pseudo | 380068 | 2029 | - | 0.503696 | |
| yaiX | b4579 | chromosome | pseudo | 380068 | 2029 | - | 0.503696 | |
| yaiX_1 | b0362 | chromosome | pseudo | 381728 | 387 | - | 0.45478 | |
| yaiX_2 | b0359 | chromosome | pseudo | 380068 | 216 | - | 0.462963 | |
| yaiY | b0379 | predicted inner membrane protein | chromosome | CDS | 398249 | 309 | - | 0.524272 |
| yaiZ | b0380 | predicted inner membrane protein | chromosome | CDS | 398817 | 213 | + | 0.488263 |
| yajB | b0404 | hypothetical protein | chromosome | CDS | 423561 | 582 | - | 0.530928 |
| yajC | b0407 | preprotein translocase subunit YajC | chromosome | CDS | 426511 | 333 | + | 0.495495 |
| yajD | b0410 | hypothetical protein | chromosome | CDS | 429829 | 348 | + | 0.471264 |
| yajG | b0434 | predicted lipoprotein | chromosome | CDS | 452813 | 579 | - | 0.512953 |
| yajI | b0412 | predicted lipoprotein | chromosome | CDS | 431536 | 540 | - | 0.475926 |
| yajL | b0424 | hypothetical protein | chromosome | CDS | 442275 | 591 | - | 0.565144 |
| yajO | b0419 | predicted oxidoreductase, NAD(P)-binding | chromosome | CDS | 436385 | 975 | - | 0.530256 |
| yajQ | b0426 | nucleotide-binding protein | chromosome | CDS | 443907 | 492 | + | 0.5 |
| yajR | b0427 | predicted transporter | chromosome | CDS | 444526 | 1365 | - | 0.526007 |
| ybaA | b0456 | hypothetical protein | chromosome | CDS | 475896 | 354 | + | 0.49435 |
| ybaB | b0471 | hypothetical protein | chromosome | CDS | 493300 | 330 | + | 0.527273 |
| ybaD | b0413 | hypothetical protein | chromosome | CDS | 432226 | 450 | + | 0.513333 |
| ybaE | b0445 | predicted transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 464836 | 1701 | - | 0.529688 |
| ybaJ | b0461 | hypothetical protein | chromosome | CDS | 479558 | 375 | - | 0.405333 |
| ybaK | b0481 | hypothetical protein | chromosome | CDS | 505827 | 480 | - | 0.508333 |
| ybaL | b0478 | predicted transporter with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 500786 | 1677 | - | 0.554562 |
| ybaM | b0466 | hypothetical protein | chromosome | CDS | 489334 | 162 | - | 0.481481 |
| ybaN | b0468 | conserved inner membrane protein | chromosome | CDS | 490106 | 378 | + | 0.521164 |
| ybaO | b0447 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 467607 | 459 | + | 0.518519 |
| ybaP | b0482 | hypothetical protein | chromosome | CDS | 506510 | 795 | - | 0.540881 |
| ybaQ | b0483 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 507442 | 342 | + | 0.447368 |
| ybaS | b0485 | predicted glutaminase | chromosome | CDS | 510865 | 933 | + | 0.531618 |
| ybaT | b0486 | predicted transporter | chromosome | CDS | 511800 | 1293 | + | 0.532869 |
| ybaV | b0442 | hypothetical protein | chromosome | CDS | 463161 | 372 | + | 0.548387 |
| ybaW | b0443 | hypothetical protein | chromosome | CDS | 463626 | 399 | + | 0.461153 |
| ybaX | b0444 | predicted aluminum resistance protein | chromosome | CDS | 464076 | 696 | - | 0.517241 |
| ybaY | b0453 | predicted outer membrane lipoprotein | chromosome | CDS | 474603 | 573 | + | 0.539267 |
| ybaZ | b0454 | predicted methyltransferase | chromosome | CDS | 475206 | 390 | - | 0.541026 |
| ybbA | b0495 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 518957 | 687 | + | 0.56623 |
| ybbB | b0503 | tRNA 2-selenouridine synthase, selenophosphate-dependent | chromosome | CDS | 529356 | 1095 | - | 0.556164 |
| ybbC | b0498 | hypothetical protein | chromosome | CDS | 526805 | 369 | + | 0.306233 |
| ybbD | b0500 | hypothetical protein | chromosome | CDS | 527864 | 261 | + | 0.279693 |
| ybbJ | b0488 | conserved inner membrane protein | chromosome | CDS | 513625 | 456 | - | 0.574561 |
| ybbK | b0489 | predicted protease, membrane anchored | chromosome | CDS | 514080 | 918 | - | 0.528322 |
| ybbL | b0490 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 515143 | 678 | + | 0.454277 |
| ybbM | b0491 | predicted inner membrane protein | chromosome | CDS | 515807 | 780 | + | 0.461538 |
| ybbN | b0492 | predicted thioredoxin domain-containing protein | chromosome | CDS | 516649 | 855 | - | 0.559064 |
| ybbO | b0493 | short chain dehydrogenase | chromosome | CDS | 517564 | 810 | - | 0.54321 |
| ybbP | b0496 | predicted inner membrane protein | chromosome | CDS | 519640 | 2415 | + | 0.575983 |
| ybbS | b0504 | DNA-binding transcriptional activator of the allD operon | chromosome | CDS | 530519 | 927 | - | 0.524272 |
| ybbV | b0510 | hypothetical protein | chromosome | CDS | 536720 | 279 | + | 0.354839 |
| ybbW | b0511 | predicted allantoin transporter | chromosome | CDS | 536857 | 1455 | + | 0.470103 |
| ybbY | b0513 | predicted uracil/xanthine transporter | chromosome | CDS | 539789 | 1302 | + | 0.512289 |
| ybcC | b0539 | DLP12 prophage; predicted exonuclease | chromosome | CDS | 565321 | 264 | - | 0.496212 |
| ybcD | b4508 | DLP12 prophage; predicted replication protein fragment (pseudogene) | chromosome | CDS | 565674 | 237 | + | 0.50211 |
| ybcF | b0521 | predicted carbamate kinase | chromosome | CDS | 549662 | 894 | + | 0.569351 |
| ybcH | b0567 | hypothetical protein | chromosome | CDS | 586314 | 891 | - | 0.523008 |
| ybcI | b0527 | conserved inner membrane protein | chromosome | CDS | 555255 | 522 | - | 0.530651 |
| ybcJ | b0528 | predicted RNA-binding protein | chromosome | CDS | 555884 | 213 | - | 0.549296 |
| ybcK | b0544 | DLP12 prophage; predicted recombinase | chromosome | CDS | 568125 | 1527 | + | 0.355599 |
| ybcL | b0545 | DLP12 prophage; predicted kinase inhibitor | chromosome | CDS | 570116 | 552 | + | 0.423913 |
| ybcM | b0546 | DLP12 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 570677 | 798 | + | 0.362155 |
| ybcN | b0547 | DLP12 prophage; predicted protein | chromosome | CDS | 571689 | 456 | + | 0.504386 |
| ybcO | b0549 | DLP12 prophage; predicted protein | chromosome | CDS | 572307 | 291 | + | 0.532646 |
| ybcQ | b0551 | DLP12 prophage; predicted antitermination protein | chromosome | CDS | 573179 | 384 | + | 0.429688 |
| ybcS | b0555 | DLP12 prophage; predicted lysozyme | chromosome | CDS | 576836 | 498 | + | 0.475904 |
| ybcV | b0558 | DLP12 prophage; predicted protein | chromosome | CDS | 578407 | 411 | - | 0.316302 |
| ybcW | b0559 | DLP12 prophage; predicted protein | chromosome | CDS | 579103 | 207 | + | 0.396135 |
| ybcY | b0562 | DLP12 prophage; predicted SAM-dependent methyltransferase | chromosome | CDS | 581375 | 585 | - | 0.415385 |
| ybdA | b0591 | predicted transporter | chromosome | CDS | 621523 | 1251 | + | 0.580336 |
| ybdB | b0597 | hypothetical protein | chromosome | CDS | 628523 | 414 | + | 0.567633 |
| ybdD | b4512 | hypothetical protein | chromosome | CDS | 631405 | 198 | + | 0.520202 |
| ybdF | b0579 | hypothetical protein | chromosome | CDS | 604741 | 369 | - | 0.471545 |
| ybdG | b0577 | predicted mechanosensitive channel | chromosome | CDS | 602639 | 1248 | - | 0.47516 |
| ybdH | b0599 | predicted oxidoreductase | chromosome | CDS | 631612 | 1089 | - | 0.551882 |
| ybdJ | b0580 | predicted inner membrane protein | chromosome | CDS | 605174 | 249 | - | 0.506024 |
| ybdK | b0581 | gamma-glutamyl:cysteine ligase | chromosome | CDS | 605488 | 1119 | - | 0.519214 |
| ybdL | b0600 | putative aminotransferase | chromosome | CDS | 632809 | 1161 | + | 0.538329 |
| ybdM | b0601 | hypothetical protein | chromosome | CDS | 633970 | 630 | - | 0.468254 |
| ybdN | b0602 | hypothetical protein | chromosome | CDS | 634572 | 1221 | - | 0.475839 |
| ybdO | b0603 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 635939 | 903 | - | 0.386489 |
| ybdR | b0608 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 641311 | 1239 | + | 0.501211 |
| ybdZ | b4511 | hypothetical protein | chromosome | CDS | 613165 | 219 | + | 0.557078 |
| ybeA | b0636 | hypothetical protein | chromosome | CDS | 667471 | 468 | - | 0.583333 |
| ybeB | b0637 | hypothetical protein | chromosome | CDS | 667942 | 318 | - | 0.512579 |
| ybeD | b0631 | hypothetical protein | chromosome | CDS | 661602 | 264 | - | 0.462121 |
| ybeF | b0629 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 659648 | 954 | - | 0.448637 |
| ybeL | b0643 | hypothetical protein | chromosome | CDS | 674241 | 483 | + | 0.52588 |
| ybeM | b4581 | chromosome | pseudo | 657254 | 788 | + | 0.541878 | |
| ybeM | b4581 | chromosome | pseudo | 657254 | 788 | + | 0.541878 | |
| ybeM_1 | b0625 | chromosome | pseudo | 657254 | 228 | + | 0.526316 | |
| ybeM_2 | b0626 | chromosome | pseudo | 657478 | 564 | + | 0.546099 | |
| ybeQ | b0644 | hypothetical protein | chromosome | CDS | 674793 | 978 | - | 0.470348 |
| ybeR | b0645 | hypothetical protein | chromosome | CDS | 675934 | 708 | + | 0.457627 |
| ybeT | b0647 | conserved outer membrane protein | chromosome | CDS | 678075 | 555 | - | 0.427027 |
| ybeU | b0648 | predicted tRNA ligase | chromosome | CDS | 678731 | 708 | + | 0.475989 |
| ybeX | b0658 | predicteed ion transport | chromosome | CDS | 690129 | 879 | - | 0.515358 |
| ybeY | b0659 | hypothetical protein | chromosome | CDS | 691097 | 468 | - | 0.517094 |
| ybeZ | b0660 | predicted protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 691561 | 1080 | - | 0.542593 |
| ybfA | b0699 | hypothetical protein | chromosome | CDS | 728357 | 207 | + | 0.502415 |
| ybfB | b0702 | predicted inner membrane protein | chromosome | CDS | 732999 | 327 | + | 0.311927 |
| ybfC | b0704 | hypothetical protein | chromosome | CDS | 734873 | 570 | + | 0.366667 |
| ybfD | b0706 | hypothetical protein | chromosome | CDS | 737315 | 762 | + | 0.396325 |
| ybfE | b0685 | LexA regulated protein | chromosome | CDS | 710828 | 294 | - | 0.537415 |
| ybfF | b0686 | hypothetical protein | chromosome | CDS | 711261 | 765 | - | 0.508497 |
| ybfG | b0690 | hypothetical protein | chromosome | CDS | 715170 | 411 | - | 0.437956 |
| ybfH | b0691 | hypothetical protein | chromosome | CDS | 715611 | 210 | - | 0.42381 |
| ybfL | b0705 | predicted transposase (pseudogene) | chromosome | CDS | 736123 | 1062 | + | 0.419962 |
| ybfM | b0681 | predicted outer membrane porin | chromosome | CDS | 707557 | 1407 | + | 0.512438 |
| ybfN | b0682 | predicted lipoprotein | chromosome | CDS | 709013 | 327 | + | 0.480122 |
| ybfO | b0703 | conserved protein, rhs-like | chromosome | CDS | 733443 | 1434 | + | 0.546025 |
| ybfP | b0689 | hypothetical protein | chromosome | CDS | 714635 | 495 | + | 0.454545 |
| ybfQ | b4514 | chromosome | pseudo | 735668 | 255 | + | 0.380392 | |
| ybfQ | b4514 | chromosome | pseudo | 735668 | 255 | + | 0.380392 | |
| ybgA | b0707 | hypothetical protein | chromosome | CDS | 738224 | 510 | + | 0.503922 |
| ybgC | b0736 | predicted acyl-CoA thioesterase | chromosome | CDS | 773975 | 405 | + | 0.496296 |
| ybgD | b0719 | predicted fimbrial-like adhesin protein | chromosome | CDS | 751452 | 567 | - | 0.467372 |
| ybgE | b0735 | conserved inner membrane protein | chromosome | CDS | 773532 | 294 | + | 0.496599 |
| ybgF | b0742 | hypothetical protein | chromosome | CDS | 778821 | 792 | + | 0.494949 |
| ybgH | b0709 | predicted transporter | chromosome | CDS | 740298 | 1482 | - | 0.524292 |
| ybgI | b0710 | conserved metal-binding protein | chromosome | CDS | 742050 | 744 | + | 0.534946 |
| ybgJ | b0711 | predicted enzyme subunit | chromosome | CDS | 742816 | 657 | + | 0.578387 |
| ybgK | b0712 | predicted enzyme subunit | chromosome | CDS | 743466 | 933 | + | 0.555198 |
| ybgL | b0713 | hypothetical protein | chromosome | CDS | 744388 | 735 | + | 0.576871 |
| ybgO | b0716 | predicted fimbrial-like adhesin protein | chromosome | CDS | 747144 | 1062 | - | 0.449153 |
| ybgP | b0717 | predicted assembly protein | chromosome | CDS | 748202 | 729 | - | 0.477366 |
| ybgQ | b0718 | predicted outer membrane protein | chromosome | CDS | 748945 | 2448 | - | 0.499591 |
| ybgS | b0753 | hypothetical protein | chromosome | CDS | 784160 | 381 | - | 0.503937 |
| ybgT | b4515 | hypothetical protein | chromosome | CDS | 773419 | 114 | + | 0.517544 |
| ybhA | b0766 | predicted hydrolase | chromosome | CDS | 796836 | 819 | - | 0.515263 |
| ybhB | b0773 | predicted kinase inhibitor | chromosome | CDS | 806656 | 477 | - | 0.524109 |
| ybhC | b0772 | predicted pectinesterase | chromosome | CDS | 805221 | 1284 | - | 0.533489 |
| ybhD | b0768 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 798845 | 1017 | - | 0.445428 |
| ybhE | b0767 | 6-phosphogluconolactonase | chromosome | CDS | 797809 | 996 | + | 0.551205 |
| ybhF | b0794 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 826468 | 1737 | - | 0.555556 |
| ybhG | b0795 | hypothetical protein | chromosome | CDS | 828197 | 999 | - | 0.570571 |
| ybhH | b0769 | hypothetical protein | chromosome | CDS | 799982 | 1053 | + | 0.488129 |
| ybhI | b0770 | predicted transporter | chromosome | CDS | 801110 | 1434 | + | 0.497908 |
| ybhJ | b0771 | predicted hydratase | chromosome | CDS | 802726 | 2262 | + | 0.514589 |
| ybhK | b0780 | predicted transferase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 814962 | 909 | - | 0.513751 |
| ybhL | b0786 | predicted inner membrane protein | chromosome | CDS | 819107 | 705 | + | 0.486525 |
| ybhM | b0787 | conserved inner membrane protein | chromosome | CDS | 820016 | 714 | + | 0.422969 |
| ybhN | b0788 | conserved inner membrane protein | chromosome | CDS | 820765 | 957 | - | 0.523511 |
| ybhO | b0789 | cardiolipin synthase 2 | chromosome | CDS | 821721 | 1242 | - | 0.544283 |
| ybhP | b0790 | predicted DNase | chromosome | CDS | 822959 | 762 | - | 0.555118 |
| ybhQ | b0791 | predicted inner membrane protein | chromosome | CDS | 823853 | 411 | + | 0.545012 |
| ybhR | b0792 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 824225 | 1107 | - | 0.523035 |
| ybhS | b0793 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 825342 | 1134 | - | 0.551146 |
| ybhT | b0762 | hypothetical protein | chromosome | CDS | 793996 | 150 | + | 0.413333 |
| ybiA | b0798 | hypothetical protein | chromosome | CDS | 831691 | 483 | - | 0.503106 |
| ybiB | b0800 | hypothetical protein | chromosome | CDS | 834471 | 963 | + | 0.556594 |
| ybiC | b0801 | predicted dehydrogenase | chromosome | CDS | 835574 | 1086 | + | 0.556169 |
| ybiH | b0796 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 829195 | 672 | - | 0.541667 |
| ybiI | b0803 | hypothetical protein | chromosome | CDS | 837413 | 267 | - | 0.520599 |
| ybiJ | b0802 | hypothetical protein | chromosome | CDS | 836888 | 261 | - | 0.505747 |
| ybiM | b0806 | hypothetical protein | chromosome | CDS | 841019 | 261 | - | 0.524904 |
| ybiN | b0807 | predicted SAM-dependent methyltransferase | chromosome | CDS | 841555 | 927 | + | 0.541532 |
| ybiO | b0808 | predicted mechanosensitive channel | chromosome | CDS | 842478 | 2226 | - | 0.533243 |
| ybiP | b0815 | predicted hydrolase, inner membrane | chromosome | CDS | 850237 | 1584 | - | 0.483586 |
| ybiR | b0818 | predicted transporter | chromosome | CDS | 852870 | 1119 | + | 0.522788 |
| ybiS | b0819 | hypothetical protein | chromosome | CDS | 854047 | 921 | - | 0.529859 |
| ybiT | b0820 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 855186 | 1593 | + | 0.527935 |
| ybiU | b0821 | hypothetical protein | chromosome | CDS | 857019 | 1266 | - | 0.556082 |
| ybiV | b0822 | predicted hydrolase | chromosome | CDS | 858436 | 816 | - | 0.466912 |
| ybiW | b0823 | predicted pyruvate formate lyase | chromosome | CDS | 859397 | 2433 | - | 0.549938 |
| ybiX | b0804 | putative hydroxylase | chromosome | CDS | 837753 | 678 | - | 0.529499 |
| ybiY | b0824 | predicted pyruvate formate lyase activating enzyme | chromosome | CDS | 861835 | 927 | - | 0.537217 |
| ybjC | b0850 | predicted inner membrane protein | chromosome | CDS | 890136 | 288 | + | 0.503472 |
| ybjD | b0876 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 915696 | 1659 | + | 0.531043 |
| ybjE | b0874 | predicted transporter | chromosome | CDS | 913181 | 900 | - | 0.482222 |
| ybjG | b0841 | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 882015 | 597 | - | 0.515913 |
| ybjH | b0843 | hypothetical protein | chromosome | CDS | 884169 | 285 | - | 0.529825 |
| ybjI | b0844 | hypothetical protein | chromosome | CDS | 884539 | 816 | - | 0.455882 |
| ybjJ | b0845 | predicted transporter | chromosome | CDS | 885354 | 1209 | - | 0.549214 |
| ybjK | b0846 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 886646 | 537 | + | 0.515829 |
| ybjL | b0847 | hypothetical protein | chromosome | CDS | 887357 | 1686 | - | 0.515421 |
| ybjM | b0848 | predicted inner membrane protein | chromosome | CDS | 889312 | 378 | + | 0.497355 |
| ybjN | b0853 | predicted oxidoreductase | chromosome | CDS | 892180 | 477 | + | 0.484277 |
| ybjO | b0858 | predicted inner membrane protein | chromosome | CDS | 897212 | 489 | + | 0.521472 |
| ybjP | b0865 | predicted lipoprotein | chromosome | CDS | 903175 | 516 | - | 0.53876 |
| ybjQ | b0866 | hypothetical protein | chromosome | CDS | 903816 | 324 | + | 0.540123 |
| ybjR | b0867 | predicted amidase and lipoprotein | chromosome | CDS | 904136 | 831 | + | 0.56077 |
| ybjS | b0868 | predicted NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 904963 | 1014 | - | 0.544379 |
| ybjT | b0869 | conserved protein with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 906075 | 1431 | - | 0.549965 |
| ybjX | b0877 | hypothetical protein | chromosome | CDS | 917351 | 993 | - | 0.499496 |
| ycaC | b0897 | predicted hydrolase | chromosome | CDS | 944154 | 627 | - | 0.46252 |
| ycaD | b0898 | putative MFS family transporter protein | chromosome | CDS | 945094 | 1149 | + | 0.520453 |
| ycaI | b0913 | conserved inner membrane protein | chromosome | CDS | 963543 | 2265 | + | 0.494923 |
| ycaJ | b0892 | recombination protein | chromosome | CDS | 937217 | 1344 | + | 0.535714 |
| ycaK | b0901 | hypothetical protein | chromosome | CDS | 948891 | 591 | + | 0.428088 |
| ycaL | b0909 | predicted peptidase with chaperone function | chromosome | CDS | 959487 | 765 | + | 0.499346 |
| ycaM | b0899 | predicted transporter | chromosome | CDS | 946452 | 1431 | + | 0.471698 |
| ycaN | b0900 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 947883 | 909 | - | 0.466447 |
| ycaO | b0905 | hypothetical protein | chromosome | CDS | 954095 | 1761 | - | 0.515616 |
| ycaP | b0906 | conserved inner membrane protein | chromosome | CDS | 955985 | 693 | + | 0.47619 |
| ycaQ | b0916 | hypothetical protein | chromosome | CDS | 968612 | 1233 | + | 0.523114 |
| ycaR | b0917 | hypothetical protein | chromosome | CDS | 969896 | 183 | + | 0.480874 |
| ycbB | b0925 | predicted carboxypeptidase | chromosome | CDS | 980270 | 1848 | + | 0.531385 |
| ycbC | b0920 | conserved inner membrane protein | chromosome | CDS | 971845 | 780 | - | 0.521795 |
| ycbF | b0944 | predicted periplasmic pilini chaperone | chromosome | CDS | 1003170 | 711 | + | 0.517581 |
| ycbG | b0956 | hypothetical protein | chromosome | CDS | 1017708 | 453 | + | 0.461369 |
| ycbJ | b0919 | hypothetical protein | chromosome | CDS | 970975 | 894 | + | 0.524608 |
| ycbK | b0926 | hypothetical protein | chromosome | CDS | 982298 | 549 | + | 0.497268 |
| ycbL | b0927 | predicted metal-binding enzyme | chromosome | CDS | 982873 | 648 | + | 0.515432 |
| ycbQ | b0938 | predicted fimbrial-like adhesin protein | chromosome | CDS | 997091 | 540 | + | 0.424074 |
| ycbR | b0939 | predicted periplasmic pilin chaperone | chromosome | CDS | 997713 | 702 | + | 0.450142 |
| ycbS | b0940 | predicted outer membrane usher protein | chromosome | CDS | 998439 | 2601 | + | 0.478662 |
| ycbT | b0941 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1001030 | 1071 | + | 0.482726 |
| ycbU | b0942 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1002112 | 543 | + | 0.471455 |
| ycbV | b0943 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1002662 | 516 | + | 0.472868 |
| ycbW | b0946 | hypothetical protein | chromosome | CDS | 1005175 | 543 | + | 0.493554 |
| ycbX | b0947 | predicted 2Fe-2S cluster-containing protein | chromosome | CDS | 1005714 | 1110 | - | 0.504505 |
| ycbY | b0948 | predicted methyltransferase | chromosome | CDS | 1007067 | 2109 | + | 0.542437 |
| ycbZ | b0955 | predicted peptidase | chromosome | CDS | 1015762 | 1761 | - | 0.517888 |
| yccA | b0970 | inner membrane protein | chromosome | CDS | 1029982 | 660 | - | 0.512121 |
| yccC | b0981 | cryptic autophosphorylating protein tyrosine kinase Etk | chromosome | CDS | 1041253 | 2181 | - | 0.505273 |
| yccE | b1001 | hypothetical protein | chromosome | CDS | 1063259 | 1257 | + | 0.341289 |
| yccF | b0961 | conserved inner membrane protein | chromosome | CDS | 1023125 | 447 | - | 0.483221 |
| yccJ | b1003 | hypothetical protein | chromosome | CDS | 1066087 | 228 | - | 0.469298 |
| yccK | b0969 | predicted sulfite reductase subunit | chromosome | CDS | 1029562 | 330 | - | 0.466667 |
| yccM | b0992 | predicted 4Fe-4S membrane protein | chromosome | CDS | 1051512 | 1074 | - | 0.49162 |
| yccR | b0959 | hypothetical protein | chromosome | CDS | 1020361 | 630 | + | 0.480952 |
| yccS | b0960 | predicted inner membrane protein | chromosome | CDS | 1020953 | 2154 | - | 0.522284 |
| yccT | b0964 | hypothetical protein | chromosome | CDS | 1026334 | 663 | - | 0.506787 |
| yccU | b0965 | predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 1027169 | 414 | + | 0.543478 |
| yccV | b0966 | DNA-binding protein, hemimethylated | chromosome | CDS | 1027627 | 369 | - | 0.533875 |
| yccW | b0967 | predicted methyltransferase | chromosome | CDS | 1028002 | 1104 | - | 0.516304 |
| yccX | b0968 | predicted acylphosphatase | chromosome | CDS | 1029287 | 279 | + | 0.523297 |
| yccZ | b0983 | predicted exopolysaccharide export protein | chromosome | CDS | 1043887 | 1140 | - | 0.509649 |
| ycdB | b1019 | hypothetical protein | chromosome | CDS | 1082599 | 1272 | + | 0.537736 |
| ycdC | b1013 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1073465 | 639 | + | 0.513302 |
| ycdG | b1006 | predicted transporter | chromosome | CDS | 1067734 | 1329 | - | 0.540256 |
| ycdH | b1007 | predicted oxidoreductase, flavin:NADH component | chromosome | CDS | 1069083 | 495 | - | 0.589899 |
| ycdI | b1008 | hypothetical protein | chromosome | CDS | 1069588 | 591 | - | 0.571912 |
| ycdK | b1010 | hypothetical protein | chromosome | CDS | 1070996 | 387 | - | 0.540052 |
| ycdL | b1011 | predicted enzyme | chromosome | CDS | 1071394 | 693 | - | 0.554113 |
| ycdM | b1012 | predicted monooxygenase | chromosome | CDS | 1072086 | 1149 | - | 0.550914 |
| ycdN | b4490 | chromosome | pseudo | 1080570 | 839 | + | 0.544696 | |
| ycdN | b4490 | chromosome | pseudo | 1080570 | 839 | + | 0.544696 | |
| ycdN_1 | b1016 | chromosome | pseudo | 1080579 | 111 | + | 0.486486 | |
| ycdN_2 | b1017 | chromosome | pseudo | 1080677 | 732 | + | 0.547814 | |
| ycdO | b1018 | hypothetical protein | chromosome | CDS | 1081466 | 1128 | + | 0.513298 |
| ycdP | b1021 | predicted inner membrane protein | chromosome | CDS | 1085329 | 414 | - | 0.442029 |
| ycdQ | b1022 | predicted glycosyl transferase | chromosome | CDS | 1085744 | 1326 | - | 0.466817 |
| ycdR | b1023 | predicted enzyme associated with biofilm formation | chromosome | CDS | 1087062 | 2019 | - | 0.444279 |
| ycdS | b1024 | predicted outer membrane protein | chromosome | CDS | 1089089 | 2424 | - | 0.473185 |
| ycdT | b1025 | predicted diguanylate cyclase | chromosome | CDS | 1092099 | 1359 | + | 0.385578 |
| ycdU | b1029 | predicted inner membrane protein | chromosome | CDS | 1095066 | 987 | + | 0.405268 |
| ycdW | b1033 | 2-ketoacid reductase | chromosome | CDS | 1097109 | 939 | + | 0.512247 |
| ycdX | b1034 | hypothetical protein | chromosome | CDS | 1098102 | 738 | + | 0.48374 |
| ycdY | b1035 | hypothetical protein | chromosome | CDS | 1098863 | 555 | + | 0.535135 |
| ycdZ | b1036 | predicted inner membrane protein | chromosome | CDS | 1099519 | 492 | + | 0.538618 |
| yceA | b1055 | hypothetical protein | chromosome | CDS | 1116030 | 1053 | + | 0.497626 |
| yceB | b1063 | predicted lipoprotein | chromosome | CDS | 1121936 | 561 | - | 0.468806 |
| yceD | b1088 | hypothetical protein | chromosome | CDS | 1146017 | 522 | + | 0.496169 |
| yceF | b1087 | Maf-like protein | chromosome | CDS | 1145234 | 585 | - | 0.500855 |
| yceG | b1097 | predicted aminodeoxychorismate lyase | chromosome | CDS | 1153335 | 1023 | + | 0.507331 |
| yceH | b1067 | hypothetical protein | chromosome | CDS | 1125380 | 648 | + | 0.518519 |
| yceI | b1056 | hypothetical protein | chromosome | CDS | 1117124 | 576 | - | 0.473958 |
| yceJ | b1057 | predicted cytochrome b561 | chromosome | CDS | 1117703 | 567 | - | 0.511464 |
| yceK | b1050 | predicted lipoprotein | chromosome | CDS | 1112802 | 228 | + | 0.504386 |
| yceO | b1058 | hypothetical protein | chromosome | CDS | 1118530 | 141 | - | 0.375887 |
| yceP | b1060 | hypothetical protein | chromosome | CDS | 1119924 | 255 | - | 0.45098 |
| yceQ | b1085 | hypothetical protein | chromosome | CDS | 1143725 | 321 | + | 0.445483 |
| ycfD | b1128 | hypothetical protein | chromosome | CDS | 1186342 | 1122 | - | 0.540107 |
| ycfH | b1100 | predicted metallodependent hydrolase | chromosome | CDS | 1156000 | 798 | + | 0.508772 |
| ycfJ | b1110 | hypothetical protein | chromosome | CDS | 1166822 | 540 | + | 0.537037 |
| ycfK | b1154 | e14 prophage; predicted protein | chromosome | CDS | 1206724 | 630 | + | 0.503175 |
| ycfL | b1104 | hypothetical protein | chromosome | CDS | 1161470 | 378 | + | 0.494709 |
| ycfM | b1105 | predicted outer membrane lipoprotein | chromosome | CDS | 1161861 | 642 | + | 0.563863 |
| ycfN | b1106 | thiamin kinase | chromosome | CDS | 1162483 | 825 | + | 0.533333 |
| ycfP | b1108 | hypothetical protein | chromosome | CDS | 1164366 | 543 | + | 0.46593 |
| ycfQ | b1111 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1167423 | 633 | - | 0.511848 |
| ycfR | b1112 | hypothetical protein | chromosome | CDS | 1168296 | 258 | + | 0.472868 |
| ycfS | b1113 | hypothetical protein | chromosome | CDS | 1168635 | 963 | - | 0.53271 |
| ycfT | b1115 | predicted inner membrane protein | chromosome | CDS | 1173315 | 1074 | - | 0.495345 |
| ycfZ | b1121 | predicted inner membrane protein | chromosome | CDS | 1179702 | 789 | - | 0.425856 |
| ycgB | b1188 | hypothetical protein | chromosome | CDS | 1234932 | 1533 | - | 0.498369 |
| ycgE | b1162 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1212551 | 732 | - | 0.487705 |
| ycgF | b1163 | predicted FAD-binding phosphodiesterase | chromosome | CDS | 1213487 | 1212 | - | 0.435644 |
| ycgG | b1168 | conserved inner membrane protein | chromosome | CDS | 1216551 | 1524 | + | 0.446194 |
| ycgH | b4491 | chromosome | pseudo | 1218824 | 2622 | + | 0.432876 | |
| ycgH | b4491 | chromosome | pseudo | 1218824 | 2622 | + | 0.432876 | |
| ycgH_1 | b1169 | chromosome | pseudo | 1220024 | 321 | + | 0.417445 | |
| ycgH_2 | b1170 | chromosome | pseudo | 1220429 | 1017 | + | 0.508358 | |
| ycgI | b1173 | hypothetical protein | chromosome | CDS | 1222918 | 213 | + | 0.511737 |
| ycgJ | b1177 | hypothetical protein | chromosome | CDS | 1225823 | 369 | + | 0.422764 |
| ycgK | b1178 | hypothetical protein | chromosome | CDS | 1226294 | 402 | - | 0.430348 |
| ycgL | b1179 | hypothetical protein | chromosome | CDS | 1226904 | 327 | + | 0.431193 |
| ycgM | b1180 | predicted isomerase/hydrolase | chromosome | CDS | 1227302 | 660 | + | 0.519697 |
| ycgN | b1181 | hypothetical protein | chromosome | CDS | 1228053 | 447 | + | 0.472036 |
| ycgR | b1194 | protein involved in flagellar function | chromosome | CDS | 1243016 | 735 | - | 0.507483 |
| ycgV | b1202 | predicted adhesin | chromosome | CDS | 1252308 | 2868 | - | 0.497908 |
| ycgX | b1161 | hypothetical protein | chromosome | CDS | 1211926 | 405 | - | 0.367901 |
| ycgY | b1196 | hypothetical protein | chromosome | CDS | 1244383 | 441 | + | 0.414966 |
| ycgZ | b1164 | hypothetical protein | chromosome | CDS | 1215012 | 237 | + | 0.417722 |
| ychA | b1214 | predicted transcriptional regulator | chromosome | CDS | 1266543 | 810 | + | 0.464198 |
| ychE | b1242 | predicted inner membrane protein | chromosome | CDS | 1297821 | 648 | + | 0.478395 |
| ychF | b1203 | translation-associated GTPase | chromosome | CDS | 1255944 | 1092 | - | 0.510073 |
| ychG | b4573 | chromosome | pseudo | 1293794 | 752 | - | 0.5625 | |
| ychG | b4573 | chromosome | pseudo | 1293794 | 752 | - | 0.5625 | |
| ychG_1 | b1240 | chromosome | pseudo | 1294191 | 231 | - | 0.645022 | |
| ychG_2 | b1239 | chromosome | pseudo | 1293649 | 591 | - | 0.532995 | |
| ychH | b1205 | predicted inner membrane protein | chromosome | CDS | 1258014 | 279 | + | 0.530466 |
| ychJ | b1233 | hypothetical protein | chromosome | CDS | 1287897 | 459 | - | 0.464052 |
| ychM | b1206 | predicted transporter | chromosome | CDS | 1258347 | 1680 | - | 0.546429 |
| ychN | b1219 | hypothetical protein | chromosome | CDS | 1272469 | 354 | - | 0.516949 |
| ychP | b1220 | predicted invasin | chromosome | CDS | 1273148 | 1254 | + | 0.511164 |
| ychQ | b1213 | predicted transcriptional regulator | chromosome | CDS | 1266147 | 393 | + | 0.475827 |
| ychS | b1228 | hypothetical protein | chromosome | CDS | 1285932 | 276 | + | 0.594203 |
| yciA | b1253 | predicted hydrolase | chromosome | CDS | 1309872 | 399 | - | 0.483709 |
| yciB | b1254 | intracellular septation protein A | chromosome | CDS | 1310375 | 540 | - | 0.464815 |
| yciC | b1255 | hypothetical protein | chromosome | CDS | 1310944 | 744 | - | 0.49328 |
| yciE | b1257 | hypothetical protein | chromosome | CDS | 1312742 | 507 | - | 0.406312 |
| yciF | b1258 | hypothetical protein | chromosome | CDS | 1313294 | 501 | - | 0.431138 |
| yciG | b1259 | hypothetical protein | chromosome | CDS | 1313880 | 180 | - | 0.511111 |
| yciH | b1282 | translation intiation factor Sui1 | chromosome | CDS | 1340682 | 327 | + | 0.498471 |
| yciI | b1251 | predicted enzyme | chromosome | CDS | 1308593 | 297 | - | 0.488215 |
| yciK | b1271 | short chain dehydrogenase | chromosome | CDS | 1326378 | 759 | - | 0.524374 |
| yciM | b1280 | hypothetical protein | chromosome | CDS | 1338582 | 1170 | + | 0.518803 |
| yciN | b1273 | hypothetical protein | chromosome | CDS | 1328441 | 252 | - | 0.472222 |
| yciO | b1267 | hypothetical protein | chromosome | CDS | 1322122 | 621 | + | 0.481481 |
| yciQ | b1268 | predicted inner membrane protein | chromosome | CDS | 1322770 | 1896 | + | 0.469937 |
| yciS | b1279 | conserved inner membrane protein | chromosome | CDS | 1338267 | 309 | + | 0.501618 |
| yciT | b1284 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1341621 | 750 | - | 0.488 |
| yciU | b1248 | dsDNA-mimic protein | chromosome | CDS | 1304845 | 330 | - | 0.472727 |
| yciV | b1266 | hypothetical protein | chromosome | CDS | 1321244 | 882 | + | 0.540816 |
| yciW | b1287 | predicted oxidoreductase | chromosome | CDS | 1347004 | 1128 | - | 0.507979 |
| yciX | b4574 | chromosome | pseudo | 1333184 | 299 | + | 0.474916 | |
| yciX_1 | b4522 | hypothetical protein | chromosome | CDS | 1333184 | 129 | + | 0.496124 |
| yciX_2 | b4523 | hypothetical protein | chromosome | CDS | 1333294 | 189 | + | 0.455026 |
| ycjD | b1289 | hypothetical protein | chromosome | CDS | 1349431 | 354 | - | 0.497175 |
| ycjF | b1322 | hypothetical protein | chromosome | CDS | 1383535 | 1062 | + | 0.563089 |
| ycjG | b1325 | L-Ala-D/L-Glu epimerase | chromosome | CDS | 1386954 | 966 | + | 0.546584 |
| ycjM | b1309 | predicted glucosyltransferase | chromosome | CDS | 1368240 | 1680 | + | 0.43869 |
| ycjN | b1310 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 1369933 | 1293 | + | 0.500387 |
| ycjO | b1311 | predicted sugar transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 1371246 | 882 | + | 0.536281 |
| ycjP | b1312 | predicted sugar transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 1372114 | 843 | + | 0.527877 |
| ycjQ | b1313 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 1372987 | 1053 | + | 0.557455 |
| ycjR | b1314 | predicted enzyme | chromosome | CDS | 1374058 | 789 | + | 0.536122 |
| ycjS | b1315 | predicted oxidoreductase, NADH-binding | chromosome | CDS | 1374856 | 1056 | + | 0.547348 |
| ycjT | b1316 | predicted hydrolase | chromosome | CDS | 1375908 | 2268 | + | 0.537478 |
| ycjU | b1317 | predicted beta-phosphoglucomutase | chromosome | CDS | 1378172 | 660 | + | 0.565152 |
| ycjV | b1318 | chromosome | pseudo | 1378845 | 969 | + | 0.505676 | |
| ycjV | b1318 | chromosome | pseudo | 1378845 | 969 | + | 0.505676 | |
| ycjW | b1320 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1380987 | 999 | - | 0.454454 |
| ycjX | b1321 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1382141 | 1398 | + | 0.544349 |
| ycjY | b1327 | predicted hydrolase | chromosome | CDS | 1388957 | 933 | - | 0.480172 |
| ycjZ | b1328 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1390015 | 900 | + | 0.465556 |
| ydaC | b1347 | Rac prophage; predicted protein | chromosome | CDS | 1411555 | 210 | - | 0.347619 |
| ydaE | b4526 | Rac prophage; conserved protein | chromosome | CDS | 1415862 | 171 | - | 0.368421 |
| ydaF | b4527 | Rac prophage; predicted protein | chromosome | CDS | 1417180 | 156 | - | 0.49359 |
| ydaG | b1355 | Rac prophage; predicted protein | chromosome | CDS | 1417346 | 135 | - | 0.474074 |
| ydaL | b1340 | hypothetical protein | chromosome | CDS | 1404003 | 564 | + | 0.542553 |
| ydaM | b1341 | predicted diguanylate cyclase, GGDEF domain signalling protein | chromosome | CDS | 1404587 | 1233 | - | 0.476886 |
| ydaN | b1342 | zinc transporter | chromosome | CDS | 1406074 | 984 | + | 0.519309 |
| ydaO | b1344 | predicted C32 tRNA thiolase | chromosome | CDS | 1409037 | 936 | - | 0.486111 |
| ydaQ | b1346 | Rac prophage; conserved protein | chromosome | CDS | 1411261 | 216 | - | 0.449074 |
| ydaS | b1357 | Rac prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1418389 | 297 | + | 0.434343 |
| ydaT | b1358 | Rac prophage; predicted protein | chromosome | CDS | 1418708 | 423 | + | 0.508274 |
| ydaU | b1359 | Rac prophage; conserved protein | chromosome | CDS | 1419143 | 858 | + | 0.479021 |
| ydaV | b1360 | Rac prophage; predicted DNA replication protein | chromosome | CDS | 1420007 | 747 | + | 0.527443 |
| ydaW | b1361 | Rac prophage; predicted DNA-binding protein | chromosome | CDS | 1420776 | 561 | + | 0.488414 |
| ydaY | b1366 | Rac prophage; predicted protein | chromosome | CDS | 1423645 | 360 | + | 0.472222 |
| ydbA | b4492 | chromosome | pseudo | 1463416 | 8622 | + | 0.495361 | |
| ydbA | b4492 | chromosome | pseudo | 1463416 | 8622 | + | 0.495361 | |
| ydbA_1 | b1401 | chromosome | pseudo | 1463416 | 2559 | + | 0.500977 | |
| ydbA_2 | b1405 | chromosome | pseudo | 1468714 | 3324 | + | 0.496691 | |
| ydbC | b1406 | predicted oxidoreductase, NAD(P)-binding | chromosome | CDS | 1472245 | 861 | + | 0.530778 |
| ydbD | b1407 | hypothetical protein | chromosome | CDS | 1473168 | 2307 | + | 0.434764 |
| ydbH | b1381 | hypothetical protein | chromosome | CDS | 1441075 | 2640 | + | 0.521212 |
| ydbJ | b4529 | hypothetical protein | chromosome | CDS | 1439082 | 267 | + | 0.546816 |
| ydbK | b1378 | fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein | chromosome | CDS | 1435284 | 3525 | - | 0.532482 |
| ydbL | b1383 | hypothetical protein | chromosome | CDS | 1443904 | 327 | + | 0.449541 |
| ydcA | b1419 | hypothetical protein | chromosome | CDS | 1489701 | 174 | + | 0.442529 |
| ydcC | b1460 | hypothetical protein | chromosome | CDS | 1529840 | 1137 | + | 0.417766 |
| ydcD | b1457 | hypothetical protein | chromosome | CDS | 1527946 | 483 | + | 0.273292 |
| ydcE | b1461 | 4-oxalocrotonate tautomerase | chromosome | CDS | 1531076 | 234 | + | 0.431624 |
| ydcF | b1414 | hypothetical protein | chromosome | CDS | 1485259 | 801 | + | 0.51186 |
| ydcH | b1426 | hypothetical protein | chromosome | CDS | 1496675 | 225 | + | 0.413333 |
| ydcI | b1422 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1492172 | 924 | - | 0.505411 |
| ydcJ | b1423 | hypothetical protein | chromosome | CDS | 1493312 | 1344 | + | 0.526786 |
| ydcK | b1428 | predicted enzyme | chromosome | CDS | 1497493 | 981 | - | 0.4842 |
| ydcL | b1431 | predicted lipoprotein | chromosome | CDS | 1500481 | 669 | + | 0.446936 |
| ydcM | b1432 | predicted transposase | chromosome | CDS | 1501681 | 1209 | + | 0.514475 |
| ydcN | b1434 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1504196 | 537 | + | 0.493482 |
| ydcO | b1433 | predicted benzoate transporter | chromosome | CDS | 1502929 | 1176 | - | 0.529762 |
| ydcP | b1435 | predicted peptidase | chromosome | CDS | 1504805 | 1962 | + | 0.510703 |
| ydcQ | b1438 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1507511 | 438 | + | 0.454338 |
| ydcR | b1439 | fused predicted DNA-binding transcriptional regulator/predicted amino transferase | chromosome | CDS | 1508027 | 1407 | + | 0.513859 |
| ydcS | b1440 | predicted spermidine/putrescine transporter subunit | chromosome | CDS | 1509678 | 1146 | + | 0.527923 |
| ydcT | b1441 | predicted spermidine/putrescine transporter subunit | chromosome | CDS | 1510841 | 1014 | + | 0.544379 |
| ydcU | b1442 | predicted spermidine/putrescine transporter subunit | chromosome | CDS | 1511855 | 942 | + | 0.529724 |
| ydcV | b1443 | predicted spermidine/putrescine transporter subunit | chromosome | CDS | 1512786 | 795 | + | 0.539623 |
| ydcW | b1444 | medium chain aldehyde dehydrogenase | chromosome | CDS | 1513602 | 1425 | + | 0.53193 |
| ydcX | b1445 | predicted inner membrane protein | chromosome | CDS | 1515413 | 174 | + | 0.448276 |
| ydcY | b1446 | hypothetical protein | chromosome | CDS | 1515672 | 234 | + | 0.542735 |
| ydcZ | b1447 | predicted inner membrane protein | chromosome | CDS | 1515906 | 450 | - | 0.517778 |
| yddA | b1496 | fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 1575681 | 1686 | - | 0.436536 |
| yddB | b1495 | predicted porin protein | chromosome | CDS | 1573271 | 2373 | - | 0.459756 |
| yddE | b1464 | hypothetical protein | chromosome | CDS | 1532989 | 894 | - | 0.520134 |
| yddG | b1473 | predicted methyl viologen efflux pump | chromosome | CDS | 1544312 | 825 | - | 0.494545 |
| yddH | b1462 | hypothetical protein | chromosome | CDS | 1531306 | 570 | - | 0.512281 |
| yddJ | b1470 | hypothetical protein | chromosome | CDS | 1542408 | 336 | - | 0.357143 |
| yddK | b1471 | hypothetical protein | chromosome | CDS | 1542782 | 957 | - | 0.321839 |
| yddL | b1472 | predicted lipoprotein | chromosome | CDS | 1543762 | 291 | - | 0.419244 |
| yddM | b1477 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1550422 | 363 | - | 0.487603 |
| yddV | b1490 | predicted diguanylate cyclase | chromosome | CDS | 1563782 | 1044 | - | 0.431992 |
| yddW | b1491 | predicted liprotein | chromosome | CDS | 1565528 | 1320 | - | 0.523485 |
| ydeA | b1528 | sugar efflux transporter | chromosome | CDS | 1615052 | 1191 | + | 0.513014 |
| ydeE | b1534 | predicted transporter | chromosome | CDS | 1619356 | 1188 | + | 0.498316 |
| ydeH | b1535 | hypothetical protein | chromosome | CDS | 1620984 | 891 | - | 0.448934 |
| ydeI | b1536 | hypothetical protein | chromosome | CDS | 1622129 | 393 | - | 0.475827 |
| ydeJ | b1537 | competence damage-inducible protein A | chromosome | CDS | 1622797 | 519 | + | 0.493256 |
| ydeK | b1510 | predicted lipoprotein | chromosome | CDS | 1592133 | 3978 | - | 0.493213 |
| ydeM | b1497 | hypothetical protein | chromosome | CDS | 1577657 | 1158 | - | 0.386874 |
| ydeN | b1498 | hypothetical protein | chromosome | CDS | 1578866 | 1683 | - | 0.440879 |
| ydeO | b1499 | predicted DNA-binding transcriptional acfivator | chromosome | CDS | 1580950 | 762 | - | 0.395013 |
| ydeP | b1501 | predicted oxidoreductase | chromosome | CDS | 1582231 | 2280 | - | 0.50307 |
| ydeQ | b1502 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1584844 | 915 | - | 0.446995 |
| ydeR | b1503 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1585817 | 504 | - | 0.448413 |
| ydeS | b1504 | predicted fimbrial-like adhesin protein | chromosome | CDS | 1586333 | 531 | - | 0.448211 |
| ydeT | b1505 | hypothetical protein | chromosome | CDS | 1586877 | 1149 | - | 0.445605 |
| ydeU | b1509 | conserved protein, predicted pseudogene | chromosome | CDS | 1590689 | 1401 | - | 0.532477 |
| ydfA | b1571 | Qin prophage; predicted protein | chromosome | CDS | 1646532 | 156 | + | 0.480769 |
| ydfB | b1572 | Qin prophage; predicted protein | chromosome | CDS | 1646689 | 129 | + | 0.465116 |
| ydfC | b1573 | Qin prophage; predicted protein | chromosome | CDS | 1646847 | 219 | + | 0.479452 |
| ydfD | b1576 | Qin prophage; predicted protein | chromosome | CDS | 1647818 | 192 | + | 0.432292 |
| ydfE | b1577 | Qin prophage; predicted protein | chromosome | CDS | 1648102 | 921 | + | 0.497286 |
| ydfG | b1539 | L-allo-threonine dehydrogenase, NAD(P)-binding | chromosome | CDS | 1625541 | 747 | + | 0.506024 |
| ydfH | b1540 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1626376 | 687 | + | 0.500728 |
| ydfI | b1542 | predicted mannonate dehydrogenase | chromosome | CDS | 1627477 | 1461 | - | 0.494867 |
| ydfJ | b1543 | predicted transporter | chromosome | CDS | 1629026 | 1284 | - | 0.469626 |
| ydfK | b1544 | Qin prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1631063 | 267 | + | 0.333333 |
| ydfO | b1549 | Qin prophage; predicted protein | chromosome | CDS | 1635071 | 411 | + | 0.316302 |
| ydfP | b1553 | Qin prophage; conserved protein | chromosome | CDS | 1637054 | 498 | - | 0.457831 |
| ydfQ | b1554 | Qin prophage; predicted lysozyme | chromosome | CDS | 1637548 | 534 | - | 0.505618 |
| ydfR | b1555 | Qin prophage; predicted protein | chromosome | CDS | 1638078 | 312 | - | 0.435897 |
| ydfT | b1559 | Qin prophage; predicted antitermination protein Q | chromosome | CDS | 1640513 | 753 | - | 0.479416 |
| ydfU | b1560 | Qin prophage; predicted protein | chromosome | CDS | 1641279 | 1050 | - | 0.521905 |
| ydfV | b1565 | Qin prophage; predicted protein | chromosome | CDS | 1643921 | 306 | + | 0.460784 |
| ydfW | b1567 | Qin prophage; predicted protein | chromosome | CDS | 1645198 | 150 | - | 0.433333 |
| ydfX | b1568 | Qin prophage; predicted protein | chromosome | CDS | 1645370 | 291 | - | 0.505155 |
| ydfZ | b1541 | hypothetical protein | chromosome | CDS | 1627239 | 204 | + | 0.519608 |
| ydgA | b1614 | hypothetical protein | chromosome | CDS | 1687876 | 1509 | + | 0.490391 |
| ydgC | b1607 | conserved inner membrane protein associated with alginate biosynthesis | chromosome | CDS | 1679719 | 336 | - | 0.473214 |
| ydgD | b1598 | predicted peptidase | chromosome | CDS | 1669984 | 822 | + | 0.520681 |
| ydgG | b1601 | predicted inner membrane protein | chromosome | CDS | 1671937 | 1035 | + | 0.502415 |
| ydgH | b1604 | hypothetical protein | chromosome | CDS | 1676451 | 945 | + | 0.511111 |
| ydgI | b1605 | predicted arginine/ornithine antiporter transporter | chromosome | CDS | 1677581 | 1383 | + | 0.535069 |
| ydgJ | b1624 | predicted oxidoreductase | chromosome | CDS | 1701292 | 1041 | - | 0.533141 |
| ydgK | b1626 | conserved inner membrane protein | chromosome | CDS | 1703274 | 441 | + | 0.487528 |
| ydgT | b1625 | predicted regulator | chromosome | CDS | 1702973 | 216 | + | 0.472222 |
| ydhA | b1639 | predicted lipoprotein | chromosome | CDS | 1716090 | 330 | - | 0.457576 |
| ydhB | b1659 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1736890 | 933 | - | 0.536977 |
| ydhC | b1660 | predicted transporter | chromosome | CDS | 1737935 | 1212 | + | 0.533828 |
| ydhD | b1654 | hypothetical protein | chromosome | CDS | 1731778 | 348 | - | 0.525862 |
| ydhF | b1647 | predicted oxidoreductase | chromosome | CDS | 1722760 | 897 | - | 0.523969 |
| ydhH | b1640 | anhydro-N-acetylmuramic acid kinase | chromosome | CDS | 1716517 | 1110 | - | 0.545946 |
| ydhI | b1643 | predicted inner membrane protein | chromosome | CDS | 1719049 | 237 | + | 0.489451 |
| ydhJ | b1644 | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 1719288 | 858 | + | 0.502331 |
| ydhK | b1645 | conserved inner membrane protein | chromosome | CDS | 1720145 | 2013 | + | 0.527571 |
| ydhL | b1648 | hypothetical protein | chromosome | CDS | 1723705 | 240 | - | 0.516667 |
| ydhM | b1649 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1724131 | 516 | + | 0.51938 |
| ydhO | b1655 | predicted lipoprotein | chromosome | CDS | 1732459 | 816 | + | 0.477941 |
| ydhP | b1657 | predicted transporter | chromosome | CDS | 1734145 | 1170 | - | 0.533333 |
| ydhQ | b1664 | hypothetical protein | chromosome | CDS | 1742895 | 1257 | - | 0.513922 |
| ydhR | b1667 | hypothetical protein | chromosome | CDS | 1744724 | 306 | + | 0.447712 |
| ydhS | b1668 | conserved protein with FAD/NAD(P)-binding domain | chromosome | CDS | 1745155 | 1605 | + | 0.478505 |
| ydhT | b1669 | hypothetical protein | chromosome | CDS | 1746771 | 813 | - | 0.528905 |
| ydhU | b1670 | predicted cytochrome | chromosome | CDS | 1747587 | 786 | - | 0.492366 |
| ydhV | b1673 | predicted oxidoreductase | chromosome | CDS | 1749752 | 2103 | - | 0.479791 |
| ydhW | b1672 | hypothetical protein | chromosome | CDS | 1749101 | 648 | - | 0.523148 |
| ydhX | b1671 | predicted 4Fe-4S ferridoxin-type protein | chromosome | CDS | 1748369 | 669 | - | 0.503737 |
| ydhY | b1674 | predicted 4Fe-4S ferridoxin-type protein | chromosome | CDS | 1751875 | 627 | - | 0.494418 |
| ydhZ | b1675 | hypothetical protein | chromosome | CDS | 1752956 | 210 | - | 0.466667 |
| ydiA | b1703 | hypothetical protein | chromosome | CDS | 1785469 | 834 | + | 0.513189 |
| ydiB | b1692 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding | chromosome | CDS | 1771813 | 867 | + | 0.477509 |
| ydiD | b1701 | hypothetical protein | chromosome | CDS | 1781001 | 1701 | + | 0.49853 |
| ydiE | b1705 | hypothetical protein | chromosome | CDS | 1787637 | 192 | + | 0.505208 |
| ydiF | b1694 | fused predicted acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit | chromosome | CDS | 1773611 | 1596 | + | 0.474937 |
| ydiH | b1685 | hypothetical protein | chromosome | CDS | 1762958 | 270 | - | 0.444444 |
| ydiI | b1686 | hypothetical protein | chromosome | CDS | 1763246 | 411 | - | 0.515815 |
| ydiJ | b1687 | predicted FAD-linked oxidoreductase | chromosome | CDS | 1763653 | 3057 | - | 0.538109 |
| ydiK | b1688 | predicted inner membrane protein | chromosome | CDS | 1767098 | 1113 | + | 0.548967 |
| ydiL | b1689 | hypothetical protein | chromosome | CDS | 1768639 | 357 | + | 0.456583 |
| ydiM | b1690 | predicted transporter | chromosome | CDS | 1769095 | 1215 | + | 0.449383 |
| ydiN | b1691 | predicted transporter | chromosome | CDS | 1770536 | 1266 | + | 0.453397 |
| ydiO | b1695 | predicted acyl-CoA dehydrogenase | chromosome | CDS | 1775220 | 1152 | + | 0.519097 |
| ydiP | b1696 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1776414 | 912 | - | 0.419956 |
| ydiQ | b1697 | hypothetical protein | chromosome | CDS | 1777641 | 765 | + | 0.513726 |
| ydiR | b1698 | predicted electron transfer flavoprotein, FAD-binding | chromosome | CDS | 1778425 | 939 | + | 0.535676 |
| ydiS | b1699 | predicted oxidoreductase with FAD/NAD(P)-binding domain | chromosome | CDS | 1779419 | 1290 | + | 0.546512 |
| ydiT | b1700 | predicted 4Fe-4S ferredoxin-type protein | chromosome | CDS | 1780705 | 294 | + | 0.479592 |
| ydiU | b1706 | hypothetical protein | chromosome | CDS | 1787832 | 1437 | - | 0.528184 |
| ydiV | b1707 | hypothetical protein | chromosome | CDS | 1789331 | 714 | - | 0.422969 |
| ydiY | b1722 | hypothetical protein | chromosome | CDS | 1803349 | 759 | - | 0.494071 |
| ydiZ | b1724 | hypothetical protein | chromosome | CDS | 1805424 | 291 | + | 0.43299 |
| ydjA | b1765 | predicted oxidoreductase | chromosome | CDS | 1846149 | 552 | - | 0.559783 |
| ydjE | b1769 | predicted transporter | chromosome | CDS | 1850645 | 1359 | - | 0.451067 |
| ydjF | b1770 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1852120 | 759 | - | 0.422925 |
| ydjG | b1771 | predicted oxidoreductase | chromosome | CDS | 1853015 | 981 | - | 0.478084 |
| ydjH | b1772 | predicted kinase | chromosome | CDS | 1854005 | 948 | - | 0.453586 |
| ydjI | b1773 | predicted aldolase | chromosome | CDS | 1854957 | 837 | - | 0.454002 |
| ydjJ | b1774 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 1855814 | 1044 | - | 0.467433 |
| ydjK | b1775 | predicted transporter | chromosome | CDS | 1856874 | 1380 | - | 0.492029 |
| ydjL | b1776 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 1858280 | 1077 | - | 0.497679 |
| ydjM | b1728 | predicted inner membrane protein regulated by LexA | chromosome | CDS | 1808235 | 591 | + | 0.51269 |
| ydjN | b1729 | predicted transporter | chromosome | CDS | 1808958 | 1392 | + | 0.524425 |
| ydjO | b1730 | hypothetical protein | chromosome | CDS | 1810353 | 816 | - | 0.355392 |
| ydjQ | b1741 | endonuclease of nucleotide excision repair | chromosome | CDS | 1821539 | 888 | + | 0.515766 |
| ydjR | b1742 | hypothetical protein | chromosome | CDS | 1822386 | 576 | - | 0.519097 |
| ydjX | b1750 | predicted inner membrane protein | chromosome | CDS | 1831425 | 711 | + | 0.481013 |
| ydjY | b1751 | hypothetical protein | chromosome | CDS | 1832140 | 678 | + | 0.483776 |
| ydjZ | b1752 | conserved inner membrane protein | chromosome | CDS | 1832832 | 708 | + | 0.515537 |
| yeaA | b1778 | methionine sulfoxide reductase B | chromosome | CDS | 1860040 | 414 | - | 0.485507 |
| yeaB | b1813 | predicted NUDIX hydrolase | chromosome | CDS | 1894194 | 579 | + | 0.549223 |
| yeaC | b1777 | hypothetical protein | chromosome | CDS | 1859726 | 273 | - | 0.450549 |
| yeaD | b1780 | hypothetical protein | chromosome | CDS | 1861874 | 885 | + | 0.498305 |
| yeaE | b1781 | predicted oxidoreductase | chromosome | CDS | 1862806 | 855 | - | 0.505263 |
| yeaG | b1783 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1864932 | 1935 | + | 0.501292 |
| yeaH | b1784 | hypothetical protein | chromosome | CDS | 1866979 | 1284 | + | 0.491433 |
| yeaI | b1785 | predicted diguanylate cyclase | chromosome | CDS | 1868409 | 1476 | + | 0.384824 |
| yeaJ | b1786 | predicted diguanylate cyclase | chromosome | CDS | 1870065 | 1491 | + | 0.460094 |
| yeaK | b1787 | hypothetical protein | chromosome | CDS | 1871598 | 504 | + | 0.513889 |
| yeaL | b1789 | conserved inner membrane protein | chromosome | CDS | 1872376 | 447 | + | 0.548098 |
| yeaM | b1790 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1872779 | 822 | - | 0.498783 |
| yeaN | b1791 | predicted transporter | chromosome | CDS | 1873697 | 1182 | + | 0.527073 |
| yeaO | b1792 | hypothetical protein | chromosome | CDS | 1874933 | 348 | + | 0.525862 |
| yeaP | b1794 | predicted diguanylate cyclase | chromosome | CDS | 1875739 | 1026 | + | 0.480507 |
| yeaQ | b1795 | conserved inner membrane protein | chromosome | CDS | 1877031 | 249 | - | 0.461847 |
| yeaR | b1797 | hypothetical protein | chromosome | CDS | 1877613 | 360 | - | 0.483333 |
| yeaS | b1798 | neutral amino-acid efflux system | chromosome | CDS | 1878145 | 639 | - | 0.452269 |
| yeaT | b1799 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1878910 | 924 | - | 0.52381 |
| yeaU | b1800 | predicted dehydrogenase | chromosome | CDS | 1879936 | 1086 | + | 0.536832 |
| yeaV | b1801 | predicted transporter | chromosome | CDS | 1881212 | 1446 | + | 0.512448 |
| yeaW | b1802 | predicted 2Fe-2S cluster-containing protein | chromosome | CDS | 1882689 | 1125 | + | 0.517333 |
| yeaX | b1803 | predicted oxidoreductase | chromosome | CDS | 1883869 | 966 | + | 0.501035 |
| yeaY | b1806 | predicted lipoprotein | chromosome | CDS | 1887975 | 582 | - | 0.536082 |
| yeaZ | b1807 | predicted peptidase | chromosome | CDS | 1888596 | 696 | - | 0.556035 |
| yebA | b1856 | predicted peptidase | chromosome | CDS | 1938337 | 1323 | - | 0.524565 |
| yebB | b1862 | hypothetical protein | chromosome | CDS | 1944275 | 603 | + | 0.441128 |
| yebC | b1864 | hypothetical protein | chromosome | CDS | 1945435 | 741 | - | 0.522267 |
| yebE | b1846 | hypothetical protein | chromosome | CDS | 1927072 | 660 | - | 0.527273 |
| yebF | b1847 | hypothetical protein | chromosome | CDS | 1928058 | 369 | - | 0.487805 |
| yebG | b1848 | conserved protein regulated by LexA | chromosome | CDS | 1928481 | 291 | - | 0.494845 |
| yebK | b1853 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1934676 | 870 | + | 0.489655 |
| yebN | b1821 | conserved inner membrane protein | chromosome | CDS | 1903712 | 567 | + | 0.516755 |
| yebO | b1825 | hypothetical protein | chromosome | CDS | 1906285 | 288 | - | 0.434028 |
| yebQ | b1828 | predicted transporter | chromosome | CDS | 1908300 | 1374 | + | 0.52329 |
| yebR | b1832 | hypothetical protein | chromosome | CDS | 1913655 | 552 | - | 0.478261 |
| yebS | b1833 | conserved inner membrane protein | chromosome | CDS | 1914282 | 1284 | + | 0.500779 |
| yebT | b1834 | hypothetical protein | chromosome | CDS | 1915534 | 2634 | + | 0.536446 |
| yebU | b1835 | predicted methyltransferase | chromosome | CDS | 1918247 | 1440 | + | 0.518056 |
| yebV | b1836 | hypothetical protein | chromosome | CDS | 1919804 | 237 | + | 0.485232 |
| yebW | b1837 | hypothetical protein | chromosome | CDS | 1920145 | 192 | + | 0.458333 |
| yebY | b1839 | hypothetical protein | chromosome | CDS | 1921389 | 342 | - | 0.459064 |
| yebZ | b1840 | predicted inner membrane protein | chromosome | CDS | 1921743 | 873 | - | 0.531501 |
| yecA | b1908 | conserved metal-binding protein | chromosome | CDS | 1988978 | 666 | - | 0.53003 |
| yecC | b1917 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 1995086 | 753 | - | 0.543161 |
| yecD | b1867 | predicted hydrolase | chromosome | CDS | 1948856 | 567 | + | 0.530864 |
| yecE | b1868 | hypothetical protein | chromosome | CDS | 1949419 | 819 | + | 0.510379 |
| yecF | b1915 | hypothetical protein | chromosome | CDS | 1993842 | 225 | + | 0.48 |
| yecG | b1895 | universal stress protein | chromosome | CDS | 1977777 | 429 | + | 0.449883 |
| yecH | b1906 | hypothetical protein | chromosome | CDS | 1987275 | 240 | - | 0.470833 |
| yecI | b1902 | predicted ferritin-like protein | chromosome | CDS | 1984949 | 504 | + | 0.478175 |
| yecJ | b4537 | hypothetical protein | chromosome | CDS | 1985531 | 252 | - | 0.484127 |
| yecM | b1875 | predicted metal-binding enzyme | chromosome | CDS | 1957304 | 567 | - | 0.507937 |
| yecN | b1869 | predicted inner membrane protein | chromosome | CDS | 1950290 | 396 | + | 0.507576 |
| yecO | b1870 | predicted methyltransferase | chromosome | CDS | 1950726 | 744 | + | 0.50672 |
| yecP | b1871 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1951466 | 972 | + | 0.520576 |
| yecR | b1904 | hypothetical protein | chromosome | CDS | 1986246 | 324 | + | 0.503086 |
| yecS | b1918 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 1995835 | 669 | - | 0.527653 |
| yecT | b1877 | hypothetical protein | chromosome | CDS | 1959996 | 489 | + | 0.388548 |
| yedA | b1959 | predicted inner membrane protein | chromosome | CDS | 2027563 | 921 | + | 0.536373 |
| yedD | b1928 | hypothetical protein | chromosome | CDS | 2005701 | 414 | - | 0.570048 |
| yedE | b1929 | predicted inner membrane protein | chromosome | CDS | 2006301 | 1206 | + | 0.548922 |
| yedF | b1930 | hypothetical protein | chromosome | CDS | 2007503 | 234 | + | 0.482906 |
| yedI | b1958 | conserved inner membrane protein | chromosome | CDS | 2026473 | 918 | - | 0.530501 |
| yedJ | b1962 | predicted phosphohydrolase | chromosome | CDS | 2030408 | 696 | - | 0.54454 |
| yedK | b1931 | hypothetical protein | chromosome | CDS | 2007845 | 669 | + | 0.518685 |
| yedL | b1932 | predicted acyltransferase | chromosome | CDS | 2008624 | 480 | + | 0.470833 |
| yedM | b1935 | hypothetical protein | chromosome | CDS | 2010025 | 351 | - | 0.316239 |
| yedN | b4495 | chromosome | pseudo | 2009372 | 522 | - | 0.354406 | |
| yedN | b4495 | chromosome | pseudo | 2009372 | 522 | - | 0.354406 | |
| yedN_1 | b1934 | chromosome | pseudo | 2009573 | 321 | - | 0.373832 | |
| yedN_2 | b1933 | chromosome | pseudo | 2009372 | 192 | - | 0.317708 | |
| yedO | b1919 | D-cysteine desulfhydrase | chromosome | CDS | 1996518 | 987 | - | 0.54002 |
| yedP | b1955 | hypothetical protein | chromosome | CDS | 2023535 | 816 | + | 0.520833 |
| yedQ | b1956 | predicted diguanylate cyclase | chromosome | CDS | 2024347 | 1695 | - | 0.513864 |
| yedR | b1963 | predicted inner membrane protein | chromosome | CDS | 2031143 | 366 | - | 0.5 |
| yedS | b4496 | chromosome | pseudo | 2032045 | 1223 | + | 0.452167 | |
| yedS | b4496 | chromosome | pseudo | 2032045 | 1223 | + | 0.452167 | |
| yedS_1 | b1964 | chromosome | pseudo | 2032075 | 486 | + | 0.465021 | |
| yedS_2 | b1965 | chromosome | pseudo | 2032570 | 210 | + | 0.452381 | |
| yedS_3 | b1966 | chromosome | pseudo | 2032863 | 405 | + | 0.454321 | |
| yedV | b1968 | predicted sensory kinase in two-component regulatory system with YedW | chromosome | CDS | 2034818 | 1359 | - | 0.396615 |
| yedW | b1969 | predicted DNA-binding response regulator in two-component system with YedV | chromosome | CDS | 2036176 | 672 | - | 0.447917 |
| yedX | b1970 | hypothetical protein | chromosome | CDS | 2036980 | 414 | + | 0.417874 |
| yedY | b1971 | hypothetical protein | chromosome | CDS | 2037502 | 1005 | + | 0.521393 |
| yedZ | b1972 | hypothetical protein | chromosome | CDS | 2038507 | 636 | + | 0.47956 |
| yeeA | b2008 | conserved inner membrane protein | chromosome | CDS | 2077557 | 1059 | - | 0.508026 |
| yeeD | b2012 | hypothetical protein | chromosome | CDS | 2082250 | 228 | - | 0.504386 |
| yeeE | b2013 | predicted inner membrane protein | chromosome | CDS | 2082491 | 1059 | - | 0.504249 |
| yeeF | b2014 | predicted amino-acid transporter | chromosome | CDS | 2083728 | 1359 | - | 0.526858 |
| yeeI | b1976 | hypothetical protein | chromosome | CDS | 2041675 | 798 | + | 0.458647 |
| yeeJ | b1978 | adhesin | chromosome | CDS | 2042935 | 7104 | + | 0.499859 |
| yeeL | b4497 | chromosome | pseudo | 2050300 | 1053 | - | 0.387464 | |
| yeeL | b4497 | chromosome | pseudo | 2050300 | 1053 | - | 0.387464 | |
| yeeL_1 | b1980 | chromosome | pseudo | 2050648 | 705 | - | 0.380142 | |
| yeeL_2 | b1979 | chromosome | pseudo | 2050300 | 327 | - | 0.409786 | |
| yeeN | b1983 | hypothetical protein | chromosome | CDS | 2054882 | 717 | + | 0.398884 |
| yeeO | b1985 | predicted multidrug efflux system | chromosome | CDS | 2056227 | 1644 | - | 0.482968 |
| yeeP | b1999 | CP4-44 prophage; predicted GTP-binding protein (pseudogene) | chromosome | CDS | 2068810 | 426 | + | 0.600939 |
| yeeR | b2001 | CP4-44 prophage; predicted membrane protein | chromosome | CDS | 2072803 | 1533 | + | 0.502935 |
| yeeS | b2002 | CP4-44 prophage; predicted DNA repair protein | chromosome | CDS | 2074332 | 447 | + | 0.581656 |
| yeeT | b2003 | CP4-44 prophage; predicted protein | chromosome | CDS | 2074841 | 222 | + | 0.527027 |
| yeeU | b2004 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system | chromosome | CDS | 2075136 | 369 | + | 0.571816 |
| yeeV | b2005 | CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system | chromosome | CDS | 2075593 | 375 | + | 0.530667 |
| yeeW | b2006 | CP4-44 prophage; predicted protein | chromosome | CDS | 2075964 | 195 | + | 0.492308 |
| yeeX | b2007 | hypothetical protein | chromosome | CDS | 2077056 | 396 | - | 0.469697 |
| yeeY | b2015 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2085353 | 930 | - | 0.504301 |
| yeeZ | b2016 | predicted epimerase, with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2086328 | 825 | - | 0.518788 |
| yefM | b2017 | antitoxin of the YoeB-YefM toxin-antitoxin system | chromosome | CDS | 2087486 | 252 | - | 0.484127 |
| yegD | b2069 | predicted chaperone | chromosome | CDS | 2145698 | 1353 | + | 0.560976 |
| yegE | b2067 | predicted diguanylate cyclase, GGDEF domain signalling protein | chromosome | CDS | 2141290 | 3318 | + | 0.523508 |
| yegH | b2063 | fused predicted membrane protein/predicted membrane protein | chromosome | CDS | 2135926 | 1584 | + | 0.531566 |
| yegI | b2070 | hypothetical protein | chromosome | CDS | 2147063 | 1947 | - | 0.508475 |
| yegJ | b2071 | hypothetical protein | chromosome | CDS | 2149209 | 462 | + | 0.411255 |
| yegK | b2072 | hypothetical protein | chromosome | CDS | 2149735 | 762 | - | 0.52231 |
| yegL | b2073 | hypothetical protein | chromosome | CDS | 2150493 | 660 | - | 0.510606 |
| yegP | b2080 | hypothetical protein | chromosome | CDS | 2163213 | 333 | + | 0.48048 |
| yegQ | b2081 | predicted peptidase | chromosome | CDS | 2163692 | 1362 | + | 0.541116 |
| yegR | b2085 | hypothetical protein | chromosome | CDS | 2166013 | 318 | - | 0.36478 |
| yegS | b2086 | hypothetical protein | chromosome | CDS | 2166736 | 900 | + | 0.496667 |
| yegT | b2098 | predicted nucleoside transporter | chromosome | CDS | 2176843 | 1278 | + | 0.502347 |
| yegU | b2099 | predicted hydrolase | chromosome | CDS | 2178117 | 1005 | + | 0.556219 |
| yegV | b2100 | predicted kinase | chromosome | CDS | 2179118 | 966 | + | 0.569358 |
| yegW | b2101 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2180057 | 747 | - | 0.514056 |
| yegX | b2102 | predicted hydrolase | chromosome | CDS | 2180855 | 819 | - | 0.479853 |
| yegZ | b2083 | chromosome | pseudo | 2165626 | 219 | - | 0.493151 | |
| yegZ | b2083 | chromosome | pseudo | 2165626 | 219 | - | 0.493151 | |
| yehA | b2108 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2185402 | 1035 | - | 0.38744 |
| yehB | b2109 | predicted outer membrane protein | chromosome | CDS | 2186452 | 2481 | - | 0.455058 |
| yehC | b2110 | predicted periplasmic pilin chaperone | chromosome | CDS | 2188948 | 720 | - | 0.393056 |
| yehD | b2111 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2189702 | 543 | - | 0.405157 |
| yehE | b2112 | hypothetical protein | chromosome | CDS | 2190537 | 282 | - | 0.439716 |
| yehI | b2118 | hypothetical protein | chromosome | CDS | 2198301 | 3633 | + | 0.507845 |
| yehK | b4541 | hypothetical protein | chromosome | CDS | 2201994 | 318 | + | 0.386792 |
| yehL | b2119 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 2202618 | 1089 | + | 0.543618 |
| yehM | b2120 | hypothetical protein | chromosome | CDS | 2203717 | 2280 | + | 0.557018 |
| yehP | b2121 | hypothetical protein | chromosome | CDS | 2205989 | 1137 | + | 0.543536 |
| yehQ | b2122 | hypothetical protein | chromosome | CDS | 2207122 | 1845 | + | 0.548509 |
| yehR | b2123 | hypothetical protein | chromosome | CDS | 2209247 | 462 | + | 0.424242 |
| yehS | b2124 | hypothetical protein | chromosome | CDS | 2209748 | 471 | - | 0.490446 |
| yehT | b2125 | predicted response regulator in two-component system withYehU | chromosome | CDS | 2210265 | 720 | - | 0.493056 |
| yehU | b2126 | predicted sensory kinase in two-component system with YehT | chromosome | CDS | 2210981 | 1686 | - | 0.505931 |
| yehW | b2128 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 2213767 | 732 | - | 0.575137 |
| yehX | b2129 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 2214503 | 927 | - | 0.551241 |
| yehY | b2130 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 2215422 | 1158 | - | 0.574266 |
| yehZ | b2131 | predicted transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 2216586 | 918 | - | 0.540305 |
| yeiA | b2147 | dihydropyrimidine dehydrogenase | chromosome | CDS | 2233287 | 1236 | + | 0.510518 |
| yeiB | b2152 | conserved inner membrane protein | chromosome | CDS | 2239832 | 1158 | - | 0.544041 |
| yeiC | b2166 | predicted kinase | chromosome | CDS | 2256377 | 942 | - | 0.470276 |
| yeiE | b2157 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2246759 | 882 | - | 0.537415 |
| yeiG | b2154 | predicted esterase | chromosome | CDS | 2241932 | 837 | + | 0.544803 |
| yeiH | b2158 | conserved inner membrane protein | chromosome | CDS | 2247739 | 1050 | + | 0.530476 |
| yeiI | b2160 | predicted kinase | chromosome | CDS | 2249722 | 1089 | + | 0.517906 |
| yeiJ | b2161 | predicted nucleoside transporter | chromosome | CDS | 2250917 | 1251 | - | 0.504396 |
| yeiL | b2163 | DNA-binding transcriptional activator of stationary phase nitrogen survival | chromosome | CDS | 2253377 | 660 | + | 0.45 |
| yeiM | b2164 | predicted nucleoside transporter | chromosome | CDS | 2254107 | 1251 | - | 0.510791 |
| yeiN | b2165 | hypothetical protein | chromosome | CDS | 2255451 | 939 | - | 0.497338 |
| yeiP | b2171 | elongation factor P | chromosome | CDS | 2263472 | 573 | + | 0.499127 |
| yeiQ | b2172 | predicted dehydrogenase, NAD-dependent | chromosome | CDS | 2264267 | 1467 | + | 0.520109 |
| yeiR | b2173 | predicted enzyme | chromosome | CDS | 2265851 | 987 | + | 0.545086 |
| yeiS | b2145 | predicted inner membrane protein | chromosome | CDS | 2231622 | 240 | + | 0.429167 |
| yeiT | b2146 | predicted oxidoreductase | chromosome | CDS | 2232055 | 1239 | + | 0.514931 |
| yeiU | b2174 | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 2266876 | 714 | + | 0.441176 |
| yeiW | b4502 | hypothetical protein | chromosome | CDS | 2263063 | 255 | - | 0.556863 |
| yejA | b2177 | predicted oligopeptide transporter subunit | chromosome | CDS | 2270386 | 1815 | + | 0.511846 |
| yejB | b2178 | predicted oligopeptide transporter subunit | chromosome | CDS | 2272201 | 1095 | + | 0.512329 |
| yejE | b2179 | predicted oligopeptide transporter subunit | chromosome | CDS | 2273295 | 1026 | + | 0.52729 |
| yejF | b2180 | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components | chromosome | CDS | 2274322 | 1590 | + | 0.513837 |
| yejG | b2181 | hypothetical protein | chromosome | CDS | 2275915 | 345 | - | 0.486957 |
| yejH | b2184 | predicted ATP-dependet helicase | chromosome | CDS | 2278654 | 1761 | + | 0.531516 |
| yejK | b2186 | nucleoid-associated protein NdpA | chromosome | CDS | 2280962 | 1008 | - | 0.522817 |
| yejL | b2187 | hypothetical protein | chromosome | CDS | 2282151 | 228 | + | 0.504386 |
| yejM | b2188 | predicted hydrolase, inner membrane | chromosome | CDS | 2282398 | 1761 | + | 0.520727 |
| yejO | b2190 | predicted autotransporter outer membrane protein | chromosome | CDS | 2284412 | 2511 | - | 0.483473 |
| yfaA | b2230 | hypothetical protein | chromosome | CDS | 2332978 | 1689 | - | 0.511545 |
| yfaD | b2244 | hypothetical protein | chromosome | CDS | 2354926 | 900 | + | 0.483333 |
| yfaE | b2236 | predicted 2Fe-2S cluster-containing protein | chromosome | CDS | 2346536 | 255 | + | 0.560784 |
| yfaH | b2238 | hypothetical protein | chromosome | CDS | 2347709 | 207 | + | 0.415459 |
| yfaL | b2233 | adhesin | chromosome | CDS | 2338439 | 3753 | - | 0.513722 |
| yfaO | b2251 | predicted NUDIX hydrolase | chromosome | CDS | 2362576 | 426 | + | 0.476526 |
| yfaP | b2225 | hypothetical protein | chromosome | CDS | 2325389 | 777 | - | 0.525097 |
| yfaQ | b2226 | hypothetical protein | chromosome | CDS | 2326170 | 1650 | - | 0.546061 |
| yfaS | b4500 | chromosome | pseudo | 2327820 | 4605 | - | 0.537242 | |
| yfaS | b4500 | chromosome | pseudo | 2327820 | 4605 | - | 0.537242 | |
| yfaS_1 | b2228 | chromosome | pseudo | 2328321 | 4104 | - | 0.537524 | |
| yfaS_2 | b2227 | chromosome | pseudo | 2327820 | 486 | - | 0.532922 | |
| yfaT | b2229 | hypothetical protein | chromosome | CDS | 2332358 | 624 | - | 0.514423 |
| yfaU | b2245 | predicted 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | chromosome | CDS | 2356064 | 804 | - | 0.53607 |
| yfaV | b2246 | predicted transporter | chromosome | CDS | 2356885 | 1290 | - | 0.527132 |
| yfaW | b2247 | predicted enolase | chromosome | CDS | 2358231 | 1218 | - | 0.520525 |
| yfaX | b2248 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2359451 | 783 | - | 0.509579 |
| yfaY | b2249 | competence damage-inducible protein A | chromosome | CDS | 2360453 | 1203 | - | 0.541978 |
| yfaZ | b2250 | predicted outer membrane porin protein | chromosome | CDS | 2361755 | 543 | - | 0.532228 |
| yfbB | b2263 | predicted peptidase | chromosome | CDS | 2374856 | 759 | - | 0.561265 |
| yfbE | b2253 | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent | chromosome | CDS | 2363932 | 1158 | + | 0.512953 |
| yfbF | b2254 | undecaprenyl phosphate-L-Ara4FN transferase | chromosome | CDS | 2365093 | 969 | + | 0.498452 |
| yfbG | b2255 | hypothetical protein | chromosome | CDS | 2366061 | 1983 | + | 0.511346 |
| yfbH | b2256 | hypothetical protein | chromosome | CDS | 2368040 | 891 | + | 0.52862 |
| yfbJ | b2258 | hypothetical protein | chromosome | CDS | 2370914 | 387 | + | 0.485788 |
| yfbK | b2270 | hypothetical protein | chromosome | CDS | 2382017 | 1728 | - | 0.472222 |
| yfbL | b2271 | predicted peptidase | chromosome | CDS | 2383882 | 972 | + | 0.450617 |
| yfbM | b2272 | hypothetical protein | chromosome | CDS | 2384956 | 504 | + | 0.456349 |
| yfbN | b2273 | hypothetical protein | chromosome | CDS | 2385732 | 717 | - | 0.390516 |
| yfbO | b2274 | hypothetical protein | chromosome | CDS | 2386603 | 477 | + | 0.383648 |
| yfbP | b2275 | hypothetical protein | chromosome | CDS | 2387135 | 852 | + | 0.434272 |
| yfbQ | b2290 | aspartate aminotransferase | chromosome | CDS | 2405583 | 1218 | + | 0.504926 |
| yfbR | b2291 | hypothetical protein | chromosome | CDS | 2406884 | 600 | + | 0.493333 |
| yfbS | b2292 | predicted transporter | chromosome | CDS | 2407542 | 1833 | - | 0.52264 |
| yfbT | b2293 | predicted hydrolase or phosphatase | chromosome | CDS | 2409461 | 651 | - | 0.565284 |
| yfbU | b2294 | hypothetical protein | chromosome | CDS | 2410122 | 495 | - | 0.476768 |
| yfbV | b2295 | hypothetical protein | chromosome | CDS | 2410699 | 456 | - | 0.508772 |
| yfbW | b4544 | hypothetical protein | chromosome | CDS | 2370579 | 336 | + | 0.535714 |
| yfcA | b2327 | conserved inner membrane protein | chromosome | CDS | 2442773 | 810 | - | 0.52716 |
| yfcC | b2298 | predicted inner membrane protein | chromosome | CDS | 2415103 | 1521 | + | 0.52071 |
| yfcD | b2299 | predicted NUDIX hydrolase | chromosome | CDS | 2416656 | 543 | - | 0.532228 |
| yfcE | b2300 | phosphodiesterase | chromosome | CDS | 2417256 | 555 | - | 0.518919 |
| yfcF | b2301 | predicted enzyme | chromosome | CDS | 2417863 | 645 | - | 0.516279 |
| yfcG | b2302 | predicted glutathione S-transferase | chromosome | CDS | 2418643 | 648 | + | 0.513889 |
| yfcH | b2304 | conserved protein with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2419730 | 894 | + | 0.549217 |
| yfcI | b2305 | hypothetical protein | chromosome | CDS | 2420671 | 891 | - | 0.455668 |
| yfcJ | b2322 | predicted transporter | chromosome | CDS | 2436964 | 1179 | - | 0.565734 |
| yfcL | b2325 | hypothetical protein | chromosome | CDS | 2441913 | 279 | - | 0.526882 |
| yfcM | b2326 | hypothetical protein | chromosome | CDS | 2442225 | 549 | - | 0.502732 |
| yfcN | b2331 | hypothetical protein | chromosome | CDS | 2446628 | 552 | + | 0.532609 |
| yfcO | b2332 | hypothetical protein | chromosome | CDS | 2447250 | 822 | - | 0.454988 |
| yfcP | b2333 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2448073 | 540 | - | 0.487037 |
| yfcQ | b2334 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2448609 | 489 | - | 0.466258 |
| yfcR | b2335 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2449094 | 513 | - | 0.491228 |
| yfcS | b2336 | predicted periplasmic pilus chaperone | chromosome | CDS | 2449606 | 753 | - | 0.50996 |
| yfcT | b2337 | predicted outer membrane export usher protein | chromosome | CDS | 2450378 | 897 | - | 0.532887 |
| yfcU | b2338 | predicted export usher protein | chromosome | CDS | 2451287 | 1737 | - | 0.510075 |
| yfcV | b2339 | predicted fimbrial-like adhesin protein | chromosome | CDS | 2453105 | 564 | - | 0.460993 |
| yfcX | b2341 | fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase | chromosome | CDS | 2455037 | 2145 | - | 0.522611 |
| yfcY | b2342 | acetyl-CoA acetyltransferase | chromosome | CDS | 2457181 | 1311 | - | 0.558352 |
| yfcZ | b2343 | hypothetical protein | chromosome | CDS | 2458672 | 285 | - | 0.515789 |
| yfdC | b2347 | predicted inner membrane protein | chromosome | CDS | 2463323 | 933 | + | 0.485531 |
| yfdE | b2371 | predicted CoA-transferase, NAD(P)-binding | chromosome | CDS | 2486045 | 1146 | - | 0.454625 |
| yfdF | b2345 | hypothetical protein | chromosome | CDS | 2461034 | 1059 | + | 0.355052 |
| yfdG | b2350 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) | chromosome | CDS | 2465877 | 363 | + | 0.460055 |
| yfdH | b2351 | CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase | chromosome | CDS | 2466236 | 921 | + | 0.395223 |
| yfdI | b2352 | CPS-53 (KpLE1) prophage; predicted inner membrane protein | chromosome | CDS | 2467153 | 1332 | + | 0.275526 |
| yfdK | b2354 | CPS-53 (KpLE1) prophage; conserved protein | chromosome | CDS | 2469099 | 441 | - | 0.455782 |
| yfdL | b2355 | CPS-53 (KpLE1) prophage; conserved protein | chromosome | CDS | 2469566 | 519 | - | 0.495183 |
| yfdM | b2356 | CPS-53 (KpLE1) prophage; predicted methyltransferase | chromosome | CDS | 2470134 | 276 | - | 0.525362 |
| yfdN | b2357 | CPS-53 (KpLE1) prophage; predicted protein | chromosome | CDS | 2470409 | 495 | - | 0.543434 |
| yfdO | b2358 | CPS-53 (KpLE1) prophage; predicted defective phage replication protein O | chromosome | CDS | 2470900 | 369 | - | 0.560976 |
| yfdP | b2359 | CPS-53 (KpLE1) prophage; predicted protein | chromosome | CDS | 2471542 | 447 | + | 0.494407 |
| yfdQ | b2360 | CPS-53 (KpLE1) prophage; predicted protein | chromosome | CDS | 2472054 | 825 | + | 0.45697 |
| yfdR | b2361 | CPS-53 (KpLE1) prophage; conserved protein | chromosome | CDS | 2473006 | 537 | + | 0.461825 |
| yfdS | b2362 | CPS-53 (KpLE1) prophage; predicted protein | chromosome | CDS | 2473533 | 363 | + | 0.471074 |
| yfdT | b2363 | CPS-53 (KpLE1) prophage; predicted protein | chromosome | CDS | 2473895 | 306 | + | 0.428105 |
| yfdV | b2372 | predicted transporter | chromosome | CDS | 2487264 | 945 | - | 0.447619 |
| yfdX | b2375 | hypothetical protein | chromosome | CDS | 2491789 | 636 | - | 0.462264 |
| yfdY | b2377 | predicted inner membrane protein | chromosome | CDS | 2493072 | 243 | - | 0.481481 |
| yfdZ | b2379 | hypothetical protein | chromosome | CDS | 2495079 | 1239 | - | 0.549637 |
| yfeA | b2395 | predicted diguanylate cyclase | chromosome | CDS | 2513665 | 2190 | - | 0.489954 |
| yfeC | b2398 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2516489 | 345 | + | 0.501449 |
| yfeD | b2399 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2516835 | 393 | + | 0.46056 |
| yfeG | b2437 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2552152 | 1053 | - | 0.533713 |
| yfeH | b2410 | predicted inner membrane protein | chromosome | CDS | 2524968 | 999 | + | 0.517518 |
| yfeK | b2419 | hypothetical protein | chromosome | CDS | 2535364 | 375 | + | 0.464 |
| yfeN | b2408 | conserved outer membrane protein | chromosome | CDS | 2523149 | 765 | + | 0.452288 |
| yfeO | b2389 | hypothetical protein | chromosome | CDS | 2507652 | 1257 | + | 0.538584 |
| yfeR | b2409 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2523952 | 927 | - | 0.539374 |
| yfeS | b2420 | hypothetical protein | chromosome | CDS | 2535771 | 735 | + | 0.391837 |
| yfeT | b2427 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2542774 | 858 | - | 0.516317 |
| yfeU | b2428 | N-acetylmuramic acid-6-phosphate etherase | chromosome | CDS | 2543795 | 897 | + | 0.535117 |
| yfeW | b2430 | hypothetical protein | chromosome | CDS | 2546124 | 1305 | + | 0.518774 |
| yfeX | b2431 | hypothetical protein | chromosome | CDS | 2547668 | 900 | - | 0.56 |
| yfeY | b2432 | hypothetical protein | chromosome | CDS | 2548663 | 576 | - | 0.508681 |
| yfeZ | b2433 | predicted inner membrane protein | chromosome | CDS | 2549299 | 450 | - | 0.528889 |
| yffB | b2471 | hypothetical protein | chromosome | CDS | 2589269 | 357 | + | 0.467787 |
| yffH | b2467 | predicted NUDIX hydrolase | chromosome | CDS | 2580925 | 576 | - | 0.486111 |
| yffI | b2438 | predicted carboxysome structural protein with predicted role in ethanolamine utilization | chromosome | CDS | 2553250 | 501 | - | 0.580838 |
| yffL | b2443 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2558279 | 642 | + | 0.443925 |
| yffM | b2444 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2559390 | 246 | + | 0.487805 |
| yffN | b2445 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2559632 | 384 | + | 0.466146 |
| yffO | b2446 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2560133 | 417 | + | 0.489209 |
| yffP | b2447 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2560546 | 594 | + | 0.523569 |
| yffQ | b2448 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2561599 | 393 | + | 0.440204 |
| yffR | b2449 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2562002 | 393 | + | 0.440204 |
| yffS | b2450 | CPZ-55 prophage; predicted protein | chromosome | CDS | 2562515 | 840 | + | 0.49881 |
| yfgA | b2516 | hypothetical protein | chromosome | CDS | 2639853 | 1014 | - | 0.545365 |
| yfgB | b2517 | predicted enzyme | chromosome | CDS | 2641151 | 1155 | - | 0.52987 |
| yfgC | b2494 | predicted peptidase | chromosome | CDS | 2614116 | 1464 | + | 0.538934 |
| yfgD | b2495 | predicted oxidoreductase | chromosome | CDS | 2615600 | 360 | + | 0.525 |
| yfgF | b2503 | predicted inner membrane protein | chromosome | CDS | 2624717 | 2244 | - | 0.466132 |
| yfgG | b2504 | hypothetical protein | chromosome | CDS | 2627312 | 192 | + | 0.494792 |
| yfgH | b2505 | predicted outer membrane lipoprotein | chromosome | CDS | 2627814 | 519 | + | 0.472062 |
| yfgI | b2506 | hypothetical protein | chromosome | CDS | 2628348 | 540 | + | 0.492593 |
| yfgJ | b2510 | hypothetical protein | chromosome | CDS | 2633621 | 216 | - | 0.476852 |
| yfgL | b2512 | protein assembly complex, lipoprotein component | chromosome | CDS | 2635496 | 1179 | - | 0.532655 |
| yfgM | b2513 | hypothetical protein | chromosome | CDS | 2636685 | 621 | - | 0.497585 |
| yfgO | b2493 | predicted inner membrane protein | chromosome | CDS | 2612842 | 1062 | - | 0.541431 |
| yfhA | b2554 | predicted DNA-binding response regulator in two-component system | chromosome | CDS | 2685491 | 1335 | - | 0.547566 |
| yfhB | b2560 | hypothetical protein | chromosome | CDS | 2695937 | 636 | - | 0.522013 |
| yfhD | b2558 | predicted transglycosylase | chromosome | CDS | 2693961 | 1419 | + | 0.503876 |
| yfhG | b2555 | hypothetical protein | chromosome | CDS | 2686815 | 714 | - | 0.542017 |
| yfhH | b2561 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2696781 | 849 | + | 0.517079 |
| yfhJ | b2524 | hypothetical protein | chromosome | CDS | 2654558 | 201 | - | 0.502488 |
| yfhK | b2556 | predicted sensory kinase in two-component system | chromosome | CDS | 2687693 | 1428 | - | 0.531513 |
| yfhL | b2562 | predicted 4Fe-4S cluster-containing protein | chromosome | CDS | 2697685 | 261 | + | 0.448276 |
| yfhM | b2520 | hypothetical protein | chromosome | CDS | 2645348 | 4962 | - | 0.529625 |
| yfhQ | b2532 | predicted methyltransferase | chromosome | CDS | 2660605 | 741 | - | 0.554656 |
| yfhR | b2534 | predicted peptidase | chromosome | CDS | 2662385 | 882 | + | 0.501134 |
| yfiA | b2597 | cold shock protein associated with 30S ribosomal subunit | chromosome | CDS | 2735176 | 342 | + | 0.461988 |
| yfiB | b2605 | predicted outer membrane lipoprotein | chromosome | CDS | 2741647 | 483 | + | 0.511387 |
| yfiC | b2575 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 2710049 | 738 | - | 0.52439 |
| yfiD | b2579 | pyruvate formate lyase subunit | chromosome | CDS | 2714088 | 384 | - | 0.479167 |
| yfiE | b2577 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2712461 | 882 | - | 0.496599 |
| yfiF | b2581 | predicted methyltransferase | chromosome | CDS | 2715513 | 1038 | - | 0.56262 |
| yfiH | b2593 | hypothetical protein | chromosome | CDS | 2732325 | 732 | - | 0.547814 |
| yfiK | b2578 | neutral amino-acid efflux system | chromosome | CDS | 2713445 | 588 | + | 0.511905 |
| yfiL | b2602 | hypothetical protein | chromosome | CDS | 2739382 | 366 | + | 0.456284 |
| yfiM | b2586 | hypothetical protein | chromosome | CDS | 2722201 | 273 | + | 0.564103 |
| yfiN | b2604 | predicted diguanylate cyclase | chromosome | CDS | 2740405 | 1227 | + | 0.483293 |
| yfiO | b2595 | predicted lipoprotein | chromosome | CDS | 2734168 | 738 | + | 0.512195 |
| yfiP | b2583 | hypothetical protein | chromosome | CDS | 2717245 | 699 | + | 0.523605 |
| yfiQ | b2584 | fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit | chromosome | CDS | 2717975 | 2661 | + | 0.543029 |
| yfiR | b2603 | hypothetical protein | chromosome | CDS | 2739897 | 519 | + | 0.456647 |
| yfjB | b2615 | inorganic polyphosphate/ATP-NAD kinase | chromosome | CDS | 2748853 | 879 | + | 0.499431 |
| yfjD | b4461 | predicted inner membrane protein | chromosome | CDS | 2746886 | 1197 | + | 0.517962 |
| yfjF | b2618 | hypothetical protein | chromosome | CDS | 2752030 | 291 | - | 0.508591 |
| yfjG | b2619 | hypothetical protein | chromosome | CDS | 2752310 | 477 | - | 0.471698 |
| yfjH | b2623 | CP4-57 prophage; predicted protein | chromosome | CDS | 2755666 | 957 | - | 0.367816 |
| yfjI | b2625 | CP4-57 prophage; predicted protein | chromosome | CDS | 2757007 | 1410 | + | 0.379433 |
| yfjJ | b2626 | CP4-57 prophage; predicted protein | chromosome | CDS | 2758569 | 627 | + | 0.403509 |
| yfjK | b2627 | CP4-57 prophage; conserved protein | chromosome | CDS | 2759373 | 2190 | - | 0.489041 |
| yfjL | b2628 | CP4-57 prophage; predicted protein | chromosome | CDS | 2761559 | 1617 | - | 0.486704 |
| yfjM | b2629 | CP4-57 prophage; predicted protein | chromosome | CDS | 2763535 | 264 | - | 0.454545 |
| yfjN | b2630 | CP4-57 prophage; RNase LS | chromosome | CDS | 2763940 | 1074 | + | 0.443203 |
| yfjO | b2631 | CP4-57 prophage; predicted protein | chromosome | CDS | 2765006 | 372 | + | 0.459677 |
| yfjP | b2632 | CP4-57 prophage; predicted GTP-binding protein | chromosome | CDS | 2765732 | 864 | + | 0.540509 |
| yfjQ | b2633 | CP4-57 prophage; predicted protein | chromosome | CDS | 2766687 | 822 | + | 0.555961 |
| yfjR | b2634 | CP4-57 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 2767725 | 702 | + | 0.57265 |
| yfjS | b2636 | CP4-57 prophage; predicted protein | chromosome | CDS | 2768703 | 444 | + | 0.509009 |
| yfjT | b2637 | CP4-57 prophage; predicted protein | chromosome | CDS | 2769170 | 468 | + | 0.512821 |
| yfjU | b2638 | CP4-57 prophage; conserved protein | chromosome | CDS | 2769862 | 315 | - | 0.415873 |
| yfjV | b2640 | CP4-57 prophage; predicted protein | chromosome | CDS | 2770858 | 201 | - | 0.517413 |
| yfjW | b2642 | CP4-57 prophage; predicted inner membrane protein | chromosome | CDS | 2771340 | 1704 | + | 0.312207 |
| yfjX | b2643 | CP4-57 prophage; predicted antirestriction protein | chromosome | CDS | 2773941 | 459 | + | 0.540305 |
| yfjY | b2644 | CP4-57 prophage; predicted DNA repair protein | chromosome | CDS | 2774408 | 483 | + | 0.542443 |
| yfjZ | b2645 | CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system | chromosome | CDS | 2775137 | 318 | + | 0.544025 |
| ygaC | b2671 | hypothetical protein | chromosome | CDS | 2797672 | 345 | - | 0.469565 |
| ygaD | b2700 | competence damage-inducible protein A | chromosome | CDS | 2821871 | 498 | - | 0.566265 |
| ygaF | b2660 | predicted enzyme | chromosome | CDS | 2788004 | 1269 | + | 0.576832 |
| ygaH | b2683 | predicted inner membrane protein | chromosome | CDS | 2808366 | 336 | + | 0.544643 |
| ygaM | b2672 | hypothetical protein | chromosome | CDS | 2798156 | 342 | + | 0.538012 |
| ygaP | b2668 | predicted inner membrane protein with hydrolase activity | chromosome | CDS | 2795542 | 525 | + | 0.459048 |
| ygaQ | b2654 | hypothetical protein | chromosome | CDS | 2784419 | 333 | + | 0.33033 |
| ygaR | b4462 | hypothetical protein | chromosome | CDS | 2784770 | 687 | + | 0.394469 |
| ygaT | b2659 | hypothetical protein | chromosome | CDS | 2787007 | 978 | + | 0.542945 |
| ygaU | b2665 | hypothetical protein | chromosome | CDS | 2794359 | 450 | - | 0.484444 |
| ygaV | b2667 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2795233 | 300 | + | 0.53 |
| ygaW | b2670 | predicted inner membrane protein | chromosome | CDS | 2797186 | 450 | + | 0.491111 |
| ygaX | b2680 | predicted transporter | chromosome | CDS | 2806338 | 267 | + | 0.546816 |
| ygaY | b2681 | predicted transporter (pseudogene) | chromosome | CDS | 2806634 | 882 | + | 0.540816 |
| ygaZ | b2682 | predicted transporter | chromosome | CDS | 2807639 | 738 | + | 0.528455 |
| ygbA | b2732 | hypothetical protein | chromosome | CDS | 2854475 | 354 | - | 0.50565 |
| ygbE | b2749 | conserved inner membrane protein | chromosome | CDS | 2871036 | 324 | - | 0.481481 |
| ygbF | b2754 | hypothetical protein | chromosome | CDS | 2876591 | 285 | - | 0.463158 |
| ygbI | b2735 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2858489 | 798 | - | 0.513784 |
| ygbJ | b2736 | predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2859452 | 909 | + | 0.530253 |
| ygbK | b2737 | hypothetical protein | chromosome | CDS | 2860357 | 1167 | + | 0.550985 |
| ygbL | b2738 | hypothetical protein | chromosome | CDS | 2861615 | 639 | + | 0.535211 |
| ygbM | b2739 | hypothetical protein | chromosome | CDS | 2862258 | 777 | + | 0.5148 |
| ygbN | b2740 | predicted transporter | chromosome | CDS | 2863123 | 1365 | + | 0.517216 |
| ygbT | b2755 | hypothetical protein | chromosome | CDS | 2876877 | 918 | - | 0.513072 |
| ygcB | b2761 | conserved protein, member of DEAD box family | chromosome | CDS | 2882575 | 2667 | - | 0.446944 |
| ygcE | b2776 | predicted kinase | chromosome | CDS | 2899918 | 1479 | + | 0.490196 |
| ygcF | b2777 | hypothetical protein | chromosome | CDS | 2902769 | 672 | - | 0.516369 |
| ygcG | b2778 | hypothetical protein | chromosome | CDS | 2903733 | 873 | + | 0.411226 |
| ygcH | b2756 | hypothetical protein | chromosome | CDS | 2877810 | 600 | - | 0.453333 |
| ygcI | b2757 | hypothetical protein | chromosome | CDS | 2878396 | 675 | - | 0.481481 |
| ygcJ | b2758 | hypothetical protein | chromosome | CDS | 2879073 | 1092 | - | 0.434982 |
| ygcK | b2759 | hypothetical protein | chromosome | CDS | 2880177 | 483 | - | 0.463768 |
| ygcL | b2760 | hypothetical protein | chromosome | CDS | 2880652 | 1509 | - | 0.438038 |
| ygcM | b2765 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) | chromosome | CDS | 2890236 | 366 | + | 0.494536 |
| ygcN | b2766 | predicted oxidoreductase with FAD/NAD(P)-binding domain | chromosome | CDS | 2890679 | 1272 | + | 0.553459 |
| ygcO | b2767 | predicted 4Fe-4S cluster-containing protein | chromosome | CDS | 2891941 | 261 | + | 0.551724 |
| ygcP | b2768 | predicted anti-terminator regulatory protein | chromosome | CDS | 2892218 | 576 | + | 0.465278 |
| ygcQ | b2769 | predicted flavoprotein | chromosome | CDS | 2892941 | 861 | - | 0.55633 |
| ygcR | b2770 | predicted flavoprotein | chromosome | CDS | 2893798 | 780 | - | 0.55641 |
| ygcS | b2771 | predicted transporter | chromosome | CDS | 2894555 | 1338 | - | 0.532138 |
| ygcU | b4463 | predicted FAD containing dehydrogenase | chromosome | CDS | 2895986 | 1455 | - | 0.505155 |
| ygcW | b2774 | predicted deoxygluconate dehydrogenase | chromosome | CDS | 2897510 | 786 | - | 0.456743 |
| ygdB | b2824 | hypothetical protein | chromosome | CDS | 2960771 | 408 | - | 0.526961 |
| ygdD | b2807 | conserved inner membrane protein | chromosome | CDS | 2939258 | 396 | - | 0.545455 |
| ygdE | b2806 | predicted methyltransferase | chromosome | CDS | 2938165 | 1101 | - | 0.522253 |
| ygdH | b2795 | hypothetical protein | chromosome | CDS | 2924330 | 1365 | + | 0.513553 |
| ygdI | b2809 | hypothetical protein | chromosome | CDS | 2940940 | 228 | - | 0.464912 |
| ygdK | b2811 | predicted Fe-S metabolism protein | chromosome | CDS | 2942564 | 444 | + | 0.545045 |
| ygdL | b2812 | hypothetical protein | chromosome | CDS | 2943058 | 807 | - | 0.546468 |
| ygdQ | b2832 | predicted inner membrane protein | chromosome | CDS | 2968442 | 714 | + | 0.498599 |
| ygdR | b2833 | hypothetical protein | chromosome | CDS | 2969293 | 219 | + | 0.43379 |
| ygeA | b2840 | predicted racemase | chromosome | CDS | 2977965 | 693 | - | 0.50938 |
| ygeD | b2835 | predicted inner membrane protein | chromosome | CDS | 2970691 | 1194 | - | 0.555276 |
| ygeF | b2850 | hypothetical protein | chromosome | CDS | 2988576 | 447 | + | 0.324385 |
| ygeG | b2851 | predicted chaperone | chromosome | CDS | 2989290 | 492 | + | 0.327236 |
| ygeH | b2852 | predictedtranscriptional regulator | chromosome | CDS | 2990116 | 1377 | + | 0.347131 |
| ygeI | b2853 | hypothetical protein | chromosome | CDS | 2991660 | 219 | + | 0.3379 |
| ygeK | b2855 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2992482 | 444 | - | 0.355856 |
| ygeL | b2856 | hypothetical protein | chromosome | CDS | 2992959 | 156 | - | 0.365385 |
| ygeM | b2857 | hypothetical protein | chromosome | CDS | 2993336 | 432 | - | 0.31713 |
| ygeN | b2858 | hypothetical protein | chromosome | CDS | 2993770 | 273 | - | 0.296703 |
| ygeO | b2859 | hypothetical protein | chromosome | CDS | 2993984 | 426 | - | 0.359155 |
| ygeP | b2862 | hypothetical protein | chromosome | CDS | 2995711 | 300 | - | 0.383333 |
| ygeQ | b2863 | hypothetical protein | chromosome | CDS | 2996056 | 795 | - | 0.427673 |
| ygeR | b2865 | Tetratricopeptide repeat transcriptional regulator | chromosome | CDS | 2997158 | 756 | - | 0.509259 |
| ygeV | b2869 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3002030 | 1779 | - | 0.45756 |
| ygeW | b2870 | hypothetical protein | chromosome | CDS | 3004284 | 1191 | + | 0.49958 |
| ygeX | b2871 | diaminopropionate ammonia-lyase | chromosome | CDS | 3005532 | 1197 | + | 0.536341 |
| ygeY | b2872 | hypothetical protein | chromosome | CDS | 3006786 | 1212 | + | 0.514852 |
| ygfA | b2912 | predicted ligase | chromosome | CDS | 3054263 | 549 | + | 0.519126 |
| ygfB | b2909 | hypothetical protein | chromosome | CDS | 3052888 | 579 | - | 0.512953 |
| ygfF | b2902 | predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 3043180 | 744 | - | 0.549731 |
| ygfG | b2919 | methylmalonyl-CoA decarboxylase, biotin-independent | chromosome | CDS | 3062015 | 786 | + | 0.493639 |
| ygfH | b2920 | propionyl-CoA:succinate-CoA transferase | chromosome | CDS | 3062824 | 1479 | + | 0.53144 |
| ygfI | b2921 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3064299 | 897 | - | 0.445931 |
| ygfJ | b2877 | hypothetical protein | chromosome | CDS | 3013182 | 579 | + | 0.431779 |
| ygfK | b2878 | predicted oxidoreductase, Fe-S subunit | chromosome | CDS | 3014082 | 3099 | + | 0.522104 |
| ygfM | b2880 | predicted oxidoreductase | chromosome | CDS | 3018562 | 780 | + | 0.544872 |
| ygfO | b2882 | predicted transporter | chromosome | CDS | 3022373 | 1401 | + | 0.488936 |
| ygfQ | b4464 | predicted transporter | chromosome | CDS | 3025143 | 1368 | + | 0.525585 |
| ygfS | b2886 | predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit | chromosome | CDS | 3026546 | 489 | - | 0.548057 |
| ygfT | b2887 | fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit | chromosome | CDS | 3027034 | 1920 | - | 0.528646 |
| ygfU | b2888 | predicted transporter | chromosome | CDS | 3029389 | 1449 | + | 0.489993 |
| ygfX | b2896 | hypothetical protein | chromosome | CDS | 3038438 | 408 | - | 0.534314 |
| ygfY | b2897 | hypothetical protein | chromosome | CDS | 3038826 | 267 | - | 0.494382 |
| ygfZ | b2898 | putative global regulator | chromosome | CDS | 3039335 | 981 | + | 0.539246 |
| yggC | b2928 | hypothetical protein | chromosome | CDS | 3071998 | 714 | - | 0.502801 |
| yggD | b2929 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3072708 | 510 | - | 0.480392 |
| yggE | b2922 | hypothetical protein | chromosome | CDS | 3065362 | 741 | - | 0.526316 |
| yggF | b2930 | predicted hexoseP phosphatase | chromosome | CDS | 3073239 | 966 | - | 0.566253 |
| yggG | b2936 | predicted peptidase | chromosome | CDS | 3079935 | 759 | + | 0.515152 |
| yggH | b2960 | tRNA(m7G46)-methyltransferase | chromosome | CDS | 3100155 | 720 | - | 0.526389 |
| yggJ | b2946 | hypothetical protein | chromosome | CDS | 3089156 | 732 | + | 0.531421 |
| yggL | b2959 | hypothetical protein | chromosome | CDS | 3099829 | 327 | - | 0.486239 |
| yggM | b2956 | hypothetical protein | chromosome | CDS | 3096580 | 1008 | - | 0.445437 |
| yggN | b2958 | hypothetical protein | chromosome | CDS | 3098926 | 720 | - | 0.525 |
| yggP | b4465 | predicted dehydrogenase | chromosome | CDS | 3074201 | 1278 | - | 0.50939 |
| yggR | b2950 | predicted transporter | chromosome | CDS | 3092122 | 981 | - | 0.554536 |
| yggS | b2951 | predicted enzyme | chromosome | CDS | 3093120 | 705 | + | 0.513475 |
| yggT | b2952 | predicted inner membrane protein | chromosome | CDS | 3093842 | 567 | + | 0.513228 |
| yggU | b2953 | hypothetical protein | chromosome | CDS | 3094405 | 291 | + | 0.477663 |
| yggV | b2954 | putative deoxyribonucleotide triphosphate pyrophosphatase | chromosome | CDS | 3094703 | 594 | + | 0.555556 |
| yggW | b2955 | coproporphyrinogen III oxidase | chromosome | CDS | 3095289 | 1137 | + | 0.532102 |
| yggX | b2962 | hypothetical protein | chromosome | CDS | 3102115 | 276 | + | 0.474638 |
| yghA | b3003 | oxidoreductase | chromosome | CDS | 3147684 | 885 | + | 0.543503 |
| yghB | b3009 | conserved inner membrane protein | chromosome | CDS | 3151585 | 660 | + | 0.510606 |
| yghD | b2968 | predicted secretion pathway M-type protein, membrane anchored | chromosome | CDS | 3108612 | 537 | - | 0.532588 |
| yghE | b2969 | predicted secretion pathway protein, L-type protein (pseudogene) | chromosome | CDS | 3109150 | 861 | - | 0.57259 |
| yghF | b2970 | predicted secretion pathway protein, C-type protein | chromosome | CDS | 3110076 | 867 | - | 0.512111 |
| yghG | b2971 | hypothetical protein | chromosome | CDS | 3111089 | 411 | - | 0.440389 |
| yghJ | b4466 | predicted inner membrane lipoprotein | chromosome | CDS | 3112572 | 4563 | - | 0.520272 |
| yghK | b2975 | glycolate transporter | chromosome | CDS | 3117619 | 1683 | - | 0.534759 |
| yghO | b2981 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3127065 | 1173 | - | 0.503836 |
| yghQ | b2983 | predicted inner membrane protein | chromosome | CDS | 3129363 | 1068 | - | 0.52809 |
| yghR | b2984 | predicted protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 3130476 | 759 | - | 0.534914 |
| yghS | b2985 | predicted protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 3131266 | 714 | - | 0.502801 |
| yghT | b2986 | predicted protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 3132153 | 693 | + | 0.474747 |
| yghU | b2989 | predicted S-transferase | chromosome | CDS | 3136749 | 867 | + | 0.534025 |
| yghW | b2998 | hypothetical protein | chromosome | CDS | 3144472 | 288 | - | 0.454861 |
| yghX | b2999 | predicted hydrolase (pseudogene) | chromosome | CDS | 3144878 | 411 | - | 0.520681 |
| yghY | b3000 | predicted dienlactone hydrolase (pseudogene) | chromosome | CDS | 3145288 | 354 | - | 0.525424 |
| yghZ | b3001 | aldo-keto reductase | chromosome | CDS | 3145919 | 1041 | + | 0.520653 |
| ygiA | b3036 | hypothetical protein | chromosome | CDS | 3177618 | 261 | + | 0.528736 |
| ygiB | b3037 | conserved outer membrane protein | chromosome | CDS | 3177862 | 576 | + | 0.565972 |
| ygiC | b3038 | predicted enzyme | chromosome | CDS | 3178443 | 1161 | + | 0.501292 |
| ygiE | b3040 | zinc transporter ZupT | chromosome | CDS | 3180572 | 774 | + | 0.531008 |
| ygiF | b3054 | predicted adenylate cyclase | chromosome | CDS | 3197686 | 1302 | - | 0.553763 |
| ygiH | b3059 | hypothetical protein | chromosome | CDS | 3202716 | 618 | + | 0.538835 |
| ygiL | b3043 | predicted fimbrial-like adhesin protein | chromosome | CDS | 3183436 | 552 | + | 0.436594 |
| ygiN | b3029 | quinol monooxygenase | chromosome | CDS | 3171164 | 315 | + | 0.504762 |
| ygiP | b3060 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3203346 | 933 | - | 0.496249 |
| ygiQ | b4469 | hypothetical protein | chromosome | CDS | 3156949 | 2220 | - | 0.545946 |
| ygiS | b3020 | predicted transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 3164133 | 1608 | - | 0.52301 |
| ygiT | b3021 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3165873 | 396 | - | 0.421717 |
| ygiV | b3023 | predicted transcriptional regulator | chromosome | CDS | 3166771 | 483 | - | 0.532091 |
| ygiW | b3024 | hypothetical protein | chromosome | CDS | 3167306 | 393 | - | 0.519084 |
| ygiZ | b3027 | conserved inner membrane protein | chromosome | CDS | 3169901 | 333 | - | 0.342342 |
| ygjD | b3064 | O-sialoglycoprotein endopeptidase | chromosome | CDS | 3207552 | 1014 | - | 0.576923 |
| ygjE | b3063 | predicted tartrate:succinate antiporter | chromosome | CDS | 3206046 | 1464 | + | 0.552596 |
| ygjF | b3068 | G/U mismatch-specific DNA glycosylase | chromosome | CDS | 3212989 | 507 | - | 0.536489 |
| ygjG | b3073 | putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent | chromosome | CDS | 3217489 | 1407 | + | 0.55295 |
| ygjH | b3074 | hypothetical protein | chromosome | CDS | 3218937 | 333 | - | 0.525526 |
| ygjI | b3078 | predicted transporter | chromosome | CDS | 3224256 | 1434 | + | 0.496513 |
| ygjJ | b3079 | hypothetical protein | chromosome | CDS | 3225823 | 1071 | + | 0.519141 |
| ygjK | b3080 | predicted glycosyl hydrolase | chromosome | CDS | 3226910 | 2352 | + | 0.544643 |
| ygjM | b3082 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3231750 | 417 | - | 0.484412 |
| ygjN | b3083 | hypothetical protein | chromosome | CDS | 3232163 | 315 | - | 0.384127 |
| ygjO | b3084 | predicted methyltransferase small domain | chromosome | CDS | 3232761 | 1137 | - | 0.538259 |
| ygjP | b3085 | predicted metal dependent hydrolase | chromosome | CDS | 3233982 | 504 | + | 0.507937 |
| ygjQ | b3086 | predicted thioredoxin-like | chromosome | CDS | 3234562 | 693 | + | 0.515152 |
| ygjR | b3087 | predicted NAD(P)-binding dehydrogenase | chromosome | CDS | 3235315 | 1005 | + | 0.525373 |
| ygjV | b3090 | conserved inner membrane protein | chromosome | CDS | 3239215 | 552 | - | 0.496377 |
| yhaB | b3120 | hypothetical protein | chromosome | CDS | 3265876 | 540 | + | 0.355556 |
| yhaC | b3121 | hypothetical protein | chromosome | CDS | 3266437 | 1188 | + | 0.318182 |
| yhaH | b3103 | predicted inner membrane protein | chromosome | CDS | 3250326 | 366 | + | 0.519126 |
| yhaI | b3104 | predicted inner membrane protein | chromosome | CDS | 3250933 | 357 | + | 0.448179 |
| yhaJ | b3105 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3251340 | 897 | - | 0.552954 |
| yhaK | b3106 | predicted pirin-related protein | chromosome | CDS | 3252341 | 702 | + | 0.534188 |
| yhaL | b3107 | hypothetical protein | chromosome | CDS | 3253065 | 165 | + | 0.521212 |
| yhaM | b4470 | hypothetical protein | chromosome | CDS | 3253363 | 1311 | - | 0.569031 |
| yhaO | b3110 | predicted transporter | chromosome | CDS | 3254701 | 1269 | - | 0.503546 |
| yhaV | b3130 | hypothetical protein | chromosome | CDS | 3275359 | 465 | + | 0.43871 |
| yhbC | b3170 | hypothetical protein | chromosome | CDS | 3315576 | 453 | - | 0.485651 |
| yhbE | b3184 | conserved inner membrane protein | chromosome | CDS | 3329792 | 966 | - | 0.530021 |
| yhbG | b3201 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 3341966 | 726 | + | 0.544077 |
| yhbH | b3203 | predicted ribosome-associated, sigma 54 modulation protein | chromosome | CDS | 3344195 | 288 | + | 0.447917 |
| yhbJ | b3205 | hypothetical protein | chromosome | CDS | 3345137 | 855 | + | 0.521637 |
| yhbN | b3200 | predicted transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 3341402 | 558 | + | 0.496416 |
| yhbO | b3153 | predicted intracellular protease | chromosome | CDS | 3296996 | 519 | + | 0.50289 |
| yhbP | b3154 | hypothetical protein | chromosome | CDS | 3297494 | 444 | - | 0.538288 |
| yhbQ | b3155 | hypothetical protein | chromosome | CDS | 3297988 | 303 | + | 0.544554 |
| yhbS | b3156 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 3298277 | 504 | - | 0.555556 |
| yhbT | b3157 | predicted lipid carrier protein | chromosome | CDS | 3298774 | 525 | - | 0.518095 |
| yhbU | b3158 | predicted peptidase (collagenase-like) | chromosome | CDS | 3299507 | 996 | + | 0.568273 |
| yhbV | b3159 | predicted protease | chromosome | CDS | 3300511 | 879 | + | 0.559727 |
| yhbW | b3160 | predicted enzyme | chromosome | CDS | 3301470 | 1008 | + | 0.558532 |
| yhbX | b3173 | predicted hydrolase, inner membrane | chromosome | CDS | 3318010 | 1626 | - | 0.430504 |
| yhbY | b3180 | predicted RNA-binding protein | chromosome | CDS | 3325812 | 294 | + | 0.486395 |
| yhcA | b3215 | predicted periplasmic chaperone protein | chromosome | CDS | 3360134 | 675 | + | 0.416296 |
| yhcB | b3233 | hypothetical protein | chromosome | CDS | 3378213 | 399 | + | 0.54386 |
| yhcC | b3211 | predicted Fe-S oxidoreductase | chromosome | CDS | 3351143 | 930 | - | 0.560215 |
| yhcD | b3216 | predicted outer membrane protein | chromosome | CDS | 3360829 | 2382 | + | 0.45508 |
| yhcE | b4569 | chromosome | pseudo | 3363207 | 1745 | + | 0.507736 | |
| yhcE_1 | b3217 | chromosome | pseudo | 3363207 | 371 | + | 0.460916 | |
| yhcE_1 | b3217 | chromosome | pseudo | 3363207 | 480 | + | 0.454167 | |
| yhcE_2 | b4549 | chromosome | pseudo | 3364703 | 249 | + | 0.445783 | |
| yhcF | b3219 | predicted transcriptional regulator | chromosome | CDS | 3364948 | 717 | + | 0.435146 |
| yhcG | b3220 | hypothetical protein | chromosome | CDS | 3365849 | 1128 | + | 0.493794 |
| yhcH | b3221 | hypothetical protein | chromosome | CDS | 3367036 | 465 | - | 0.473118 |
| yhcM | b3232 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 3376892 | 1128 | - | 0.51773 |
| yhcN | b3238 | hypothetical protein | chromosome | CDS | 3383560 | 264 | + | 0.484848 |
| yhcO | b3239 | predicted barnase inhibitor | chromosome | CDS | 3383879 | 273 | - | 0.428571 |
| yhdA | b3252 | conserved inner membrane protein | chromosome | CDS | 3399414 | 1941 | - | 0.506955 |
| yhdE | b3248 | Maf-like protein | chromosome | CDS | 3395807 | 594 | - | 0.537037 |
| yhdH | b3253 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 3401506 | 975 | + | 0.553846 |
| yhdJ | b3262 | predicted methyltransferase | chromosome | CDS | 3409675 | 885 | + | 0.474576 |
| yhdL | b4550 | hypothetical protein | chromosome | CDS | 3436453 | 219 | - | 0.43379 |
| yhdN | b3293 | hypothetical protein | chromosome | CDS | 3437163 | 369 | - | 0.479675 |
| yhdP | b4472 | conserved membrane protein, predicted transporter | chromosome | CDS | 3390480 | 3801 | - | 0.533544 |
| yhdT | b3257 | conserved inner membrane protein | chromosome | CDS | 3405397 | 243 | + | 0.54321 |
| yhdU | b3263 | predicted membrane protein | chromosome | CDS | 3410643 | 180 | + | 0.405556 |
| yhdV | b3267 | predicted outer membrane protein | chromosome | CDS | 3416412 | 222 | + | 0.540541 |
| yhdW | b3268 | predicted amino-acid transporter subunit | chromosome | CDS | 3417171 | 918 | + | 0.493464 |
| yhdX | b3269 | predicted amino-acid transporter subunit | chromosome | CDS | 3418156 | 1182 | + | 0.502538 |
| yhdY | b3270 | predicted amino-acid transporter subunit | chromosome | CDS | 3419347 | 1104 | + | 0.524457 |
| yhdZ | b3271 | predicted amino-acid transporter subunit | chromosome | CDS | 3420458 | 759 | + | 0.470356 |
| yheL | b3343 | predicted intracellular sulfur oxidation protein | chromosome | CDS | 3472700 | 288 | - | 0.503472 |
| yheM | b3344 | hypothetical protein | chromosome | CDS | 3472995 | 360 | - | 0.502778 |
| yheN | b3345 | hypothetical protein | chromosome | CDS | 3473354 | 387 | - | 0.552972 |
| yheO | b3346 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3473740 | 723 | - | 0.473029 |
| yheS | b3352 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 3479311 | 1914 | + | 0.553292 |
| yheT | b3353 | predicted hydrolase | chromosome | CDS | 3481224 | 1023 | + | 0.542522 |
| yheU | b3354 | hypothetical protein | chromosome | CDS | 3482240 | 219 | + | 0.497717 |
| yheV | b4551 | hypothetical protein | chromosome | CDS | 3476614 | 201 | - | 0.482587 |
| yhfA | b3356 | hypothetical protein | chromosome | CDS | 3483436 | 405 | - | 0.516049 |
| yhfG | b3362 | hypothetical protein | chromosome | CDS | 3489475 | 168 | - | 0.511905 |
| yhfK | b3358 | conserved inner membrane protein | chromosome | CDS | 3484813 | 2103 | + | 0.527817 |
| yhfL | b3369 | conserved secreted peptide | chromosome | CDS | 3497470 | 168 | + | 0.422619 |
| yhfS | b3376 | hypothetical protein | chromosome | CDS | 3502957 | 1086 | - | 0.569061 |
| yhfT | b3377 | predicted inner membrane protein | chromosome | CDS | 3504054 | 1305 | - | 0.530268 |
| yhfU | b3378 | hypothetical protein | chromosome | CDS | 3505370 | 354 | - | 0.474576 |
| yhfW | b3380 | predicted mutase | chromosome | CDS | 3506609 | 1227 | - | 0.541157 |
| yhfX | b3381 | predicted amino acid racemase | chromosome | CDS | 3507835 | 1164 | - | 0.545533 |
| yhfY | b3382 | hypothetical protein | chromosome | CDS | 3509082 | 363 | - | 0.515152 |
| yhfZ | b3383 | hypothetical protein | chromosome | CDS | 3509461 | 906 | - | 0.524283 |
| yhgA | b3411 | predicted transposase | chromosome | CDS | 3541189 | 879 | + | 0.47554 |
| yhgE | b3402 | predicted inner membrane protein | chromosome | CDS | 3528737 | 1725 | - | 0.50087 |
| yhgF | b3407 | predicted transcriptional accessory protein | chromosome | CDS | 3535407 | 2322 | + | 0.568475 |
| yhgG | b3410 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3540750 | 237 | + | 0.548523 |
| yhgN | b3434 | predicted antibiotic transporter | chromosome | CDS | 3573094 | 594 | + | 0.5 |
| yhhA | b3448 | hypothetical protein | chromosome | CDS | 3584966 | 441 | + | 0.514739 |
| yhhF | b3465 | predicted methyltransferase | chromosome | CDS | 3602416 | 597 | + | 0.539364 |
| yhhH | b3483 | hypothetical protein | chromosome | CDS | 3621422 | 384 | + | 0.333333 |
| yhhI | b3484 | predicted transposase | chromosome | CDS | 3622401 | 1137 | + | 0.415128 |
| yhhJ | b3485 | predicted transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 3623702 | 1125 | - | 0.546667 |
| yhhK | b3459 | hypothetical protein | chromosome | CDS | 3596007 | 384 | + | 0.565104 |
| yhhL | b3466 | conserved inner membrane protein | chromosome | CDS | 3603002 | 270 | + | 0.455556 |
| yhhM | b3467 | hypothetical protein | chromosome | CDS | 3603274 | 360 | - | 0.511111 |
| yhhN | b3468 | conserved inner membrane protein | chromosome | CDS | 3603774 | 627 | + | 0.566188 |
| yhhP | b3470 | cell developmental protein SirA | chromosome | CDS | 3606774 | 246 | - | 0.536585 |
| yhhQ | b3471 | conserved inner membrane protein | chromosome | CDS | 3607240 | 666 | + | 0.507508 |
| yhhS | b3473 | predicted transporter | chromosome | CDS | 3608539 | 1218 | - | 0.567324 |
| yhhT | b3474 | predicted inner membrane protein | chromosome | CDS | 3609888 | 1050 | + | 0.514286 |
| yhhW | b3439 | hypothetical protein | chromosome | CDS | 3576973 | 696 | - | 0.522988 |
| yhhX | b3440 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 3577791 | 1038 | - | 0.507707 |
| yhhY | b3441 | predicted acetyltransferase | chromosome | CDS | 3579161 | 489 | + | 0.517382 |
| yhhZ | b3442 | hypothetical protein | chromosome | CDS | 3579886 | 1179 | + | 0.340119 |
| yhiD | b3508 | predicted Mg(2+) transport ATPase inner membrane protein | chromosome | CDS | 3653278 | 648 | - | 0.455247 |
| yhiF | b3507 | predicted DNA-binding ranscriptional regulator | chromosome | CDS | 3652706 | 531 | + | 0.397363 |
| yhiI | b3487 | predicted HlyD family secretion protein | chromosome | CDS | 3627558 | 1068 | - | 0.582397 |
| yhiJ | b3488 | hypothetical protein | chromosome | CDS | 3628991 | 1623 | - | 0.374615 |
| yhiK | b3489 | hypothetical protein | chromosome | CDS | 3630875 | 393 | - | 0.356234 |
| yhiL | b3490 | hypothetical protein | chromosome | CDS | 3631243 | 1239 | - | 0.347054 |
| yhiM | b3491 | conserved inner membrane protein | chromosome | CDS | 3632864 | 1053 | + | 0.471035 |
| yhiN | b3492 | predicted oxidoreductase with FAD/NAD(P)-binding domain | chromosome | CDS | 3634231 | 1203 | - | 0.551122 |
| yhiO | b3494 | universal stress protein UspB | chromosome | CDS | 3637408 | 336 | - | 0.470238 |
| yhiP | b3496 | predicted transporter | chromosome | CDS | 3638885 | 1470 | + | 0.518367 |
| yhiQ | b3497 | predicted SAM-dependent methyltransferase | chromosome | CDS | 3640403 | 753 | - | 0.581673 |
| yhiR | b3499 | predicted DNA (exogenous) processing protein | chromosome | CDS | 3643408 | 843 | + | 0.544484 |
| yhiS | b3504 | hypothetical protein | chromosome | CDS | 3649314 | 783 | + | 0.360153 |
| yhjA | b3518 | predicted cytochrome C peroxidase | chromosome | CDS | 3665814 | 1398 | - | 0.484263 |
| yhjB | b3520 | predicted DNA-binding response regulator in two-component regulatory system | chromosome | CDS | 3669315 | 603 | - | 0.477612 |
| yhjC | b3521 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3670365 | 972 | + | 0.520576 |
| yhjD | b3522 | conserved inner membrane protein | chromosome | CDS | 3671385 | 1014 | + | 0.526627 |
| yhjE | b3523 | predicted transporter | chromosome | CDS | 3672809 | 1323 | + | 0.556311 |
| yhjG | b3524 | predicted outer membrane biogenesis protein | chromosome | CDS | 3674313 | 2076 | - | 0.532274 |
| yhjH | b3525 | EAL domain containing protein involved in flagellar function | chromosome | CDS | 3676443 | 768 | - | 0.527344 |
| yhjJ | b3527 | predicted zinc-dependent peptidase | chromosome | CDS | 3678467 | 1497 | - | 0.534402 |
| yhjK | b3529 | predicted diguanylate cyclase | chromosome | CDS | 3681653 | 1950 | - | 0.526154 |
| yhjQ | b3534 | cell division protein (chromosome partitioning ATPase) (pseudogene) | chromosome | CDS | 3693256 | 729 | - | 0.536351 |
| yhjR | b3535 | hypothetical protein | chromosome | CDS | 3694020 | 189 | - | 0.460317 |
| yhjV | b3539 | predicted transporter | chromosome | CDS | 3698586 | 1272 | + | 0.454403 |
| yhjX | b3547 | predicted transporter | chromosome | CDS | 3708822 | 1209 | - | 0.511993 |
| yhjY | b3548 | hypothetical protein | chromosome | CDS | 3710259 | 699 | - | 0.502146 |
| yiaA | b3562 | conserved inner membrane protein | chromosome | CDS | 3724947 | 438 | - | 0.410959 |
| yiaB | b3563 | conserved inner membrane protein | chromosome | CDS | 3725430 | 342 | - | 0.415205 |
| yiaC | b3550 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 3711675 | 441 | + | 0.521542 |
| yiaD | b3552 | predicted outer membrane lipoprotien | chromosome | CDS | 3714570 | 660 | + | 0.578788 |
| yiaF | b3554 | hypothetical protein | chromosome | CDS | 3716357 | 711 | - | 0.504923 |
| yiaG | b3555 | predicted transcriptional regulator | chromosome | CDS | 3717501 | 291 | + | 0.439863 |
| yiaH | b3561 | conserved inner membrane protein | chromosome | CDS | 3723910 | 996 | + | 0.467871 |
| yiaI | b3573 | predicted hydrogenase, 4Fe-4S ferredoxin-type component | chromosome | CDS | 3739132 | 474 | - | 0.535865 |
| yiaJ | b3574 | predicted DNA-binding transcriptional repressor | chromosome | CDS | 3739707 | 849 | - | 0.52179 |
| yiaK | b3575 | 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent | chromosome | CDS | 3740756 | 999 | + | 0.530531 |
| yiaL | b3576 | hypothetical protein | chromosome | CDS | 3741766 | 468 | + | 0.452991 |
| yiaM | b3577 | predicted transporter | chromosome | CDS | 3742351 | 474 | + | 0.440928 |
| yiaN | b3578 | predicted transporter | chromosome | CDS | 3742827 | 1278 | + | 0.508607 |
| yiaO | b3579 | predicted transporter | chromosome | CDS | 3744117 | 987 | + | 0.511651 |
| yiaT | b3584 | hypothetical protein | chromosome | CDS | 3749151 | 741 | - | 0.487179 |
| yiaU | b3585 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3750015 | 975 | + | 0.476923 |
| yiaV | b3586 | membrane fusion protein (MFP) component of efflux pump, signal anchor | chromosome | CDS | 3750986 | 1137 | - | 0.506596 |
| yiaW | b3587 | conserved inner membrane protein | chromosome | CDS | 3752128 | 324 | - | 0.466049 |
| yiaY | b3589 | predicted Fe-containing alcohol dehydrogenase | chromosome | CDS | 3754699 | 1152 | - | 0.505208 |
| yibA | b3594 | lyase containing HEAT-repeat | chromosome | CDS | 3764360 | 843 | + | 0.336892 |
| yibD | b3615 | predicted glycosyl transferase | chromosome | CDS | 3787070 | 1035 | - | 0.459903 |
| yibF | b3592 | predicted glutathione S-transferase | chromosome | CDS | 3759370 | 609 | - | 0.527094 |
| yibG | b3596 | hypothetical protein | chromosome | CDS | 3766200 | 462 | + | 0.322511 |
| yibH | b3597 | hypothetical protein | chromosome | CDS | 3768266 | 1137 | - | 0.526825 |
| yibI | b3598 | predicted inner membrane protein | chromosome | CDS | 3769405 | 363 | - | 0.515152 |
| yibJ | b3595 | predicted Rhs-family protein | chromosome | CDS | 3765244 | 702 | + | 0.502849 |
| yibK | b3606 | predicted rRNA methylase | chromosome | CDS | 3779238 | 474 | + | 0.550633 |
| yibL | b3602 | hypothetical protein | chromosome | CDS | 3774688 | 363 | + | 0.509642 |
| yibN | b3611 | predicted rhodanese-related sulfurtransferase | chromosome | CDS | 3782607 | 432 | - | 0.49537 |
| yibQ | b3614 | predicted polysaccharide deacetylase | chromosome | CDS | 3786124 | 960 | + | 0.527083 |
| yibT | b4554 | hypothetical protein | chromosome | CDS | 3774194 | 210 | - | 0.490476 |
| yicC | b3644 | hypothetical protein | chromosome | CDS | 3814699 | 864 | + | 0.538194 |
| yicE | b3654 | predicted transporter | chromosome | CDS | 3826968 | 1392 | + | 0.548851 |
| yicG | b3646 | conserved inner membrane protein | chromosome | CDS | 3816897 | 618 | + | 0.533981 |
| yicH | b3655 | hypothetical protein | chromosome | CDS | 3828480 | 1710 | + | 0.542105 |
| yicI | b3656 | predicted alpha-glucosidase | chromosome | CDS | 3830242 | 2319 | - | 0.520483 |
| yicJ | b3657 | predicted transporter | chromosome | CDS | 3832570 | 1383 | - | 0.493854 |
| yicL | b3660 | predicted inner membrane protein | chromosome | CDS | 3836271 | 924 | + | 0.487013 |
| yicM | b3662 | predicted transporter | chromosome | CDS | 3838572 | 1356 | - | 0.522124 |
| yicN | b3663 | hypothetical protein | chromosome | CDS | 3839973 | 453 | - | 0.527594 |
| yicO | b3664 | predicted xanthine/uracil permase | chromosome | CDS | 3840478 | 1335 | - | 0.483146 |
| yicR | b3638 | DNA repair protein RadC | chromosome | CDS | 3809914 | 669 | - | 0.479821 |
| yicS | b4555 | hypothetical protein | chromosome | CDS | 3838238 | 294 | + | 0.428571 |
| yidA | b3697 | predicted hydrolase | chromosome | CDS | 3874163 | 813 | - | 0.510455 |
| yidB | b3698 | hypothetical protein | chromosome | CDS | 3875090 | 399 | - | 0.511278 |
| yidC | b3705 | inner membrane protein translocase component YidC | chromosome | CDS | 3883099 | 1647 | + | 0.536733 |
| yidD | b4557 | hypothetical protein | chromosome | CDS | 3882839 | 258 | + | 0.546512 |
| yidE | b3685 | hypothetical protein | chromosome | CDS | 3862635 | 1662 | - | 0.528881 |
| yidF | b3674 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3853137 | 498 | - | 0.536145 |
| yidG | b3675 | predicted inner membrane protein | chromosome | CDS | 3853631 | 363 | - | 0.504132 |
| yidH | b3676 | conserved inner membrane protein | chromosome | CDS | 3853983 | 348 | - | 0.520115 |
| yidI | b3677 | predicted inner membrane protein | chromosome | CDS | 3854438 | 450 | + | 0.48 |
| yidJ | b3678 | predicted sulfatase/phosphatase | chromosome | CDS | 3854934 | 1494 | - | 0.52008 |
| yidK | b3679 | predicted transporter | chromosome | CDS | 3856424 | 1716 | - | 0.534965 |
| yidL | b3680 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3858276 | 924 | + | 0.435065 |
| yidP | b3684 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3861922 | 717 | + | 0.51325 |
| yidQ | b3688 | conserved outer membrane protein | chromosome | CDS | 3865751 | 333 | + | 0.537538 |
| yidR | b3689 | hypothetical protein | chromosome | CDS | 3866085 | 1215 | - | 0.549794 |
| yidX | b3696 | predicted lipoproteinC | chromosome | CDS | 3873461 | 657 | + | 0.429224 |
| yidZ | b3711 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3890788 | 960 | + | 0.521875 |
| yieE | b3712 | predicted phosphopantetheinyl transferase | chromosome | CDS | 3891892 | 762 | + | 0.520997 |
| yieF | b3713 | chromate reductase, Class I, flavoprotein | chromosome | CDS | 3892675 | 567 | + | 0.527337 |
| yieG | b3714 | predicted inner membrane protein | chromosome | CDS | 3893295 | 1338 | - | 0.537369 |
| yieH | b3715 | predicted hydrolase | chromosome | CDS | 3894797 | 666 | + | 0.48048 |
| yieI | b3716 | predicted inner membrane protein | chromosome | CDS | 3895529 | 468 | + | 0.438034 |
| yieK | b3718 | hypothetical protein | chromosome | CDS | 3896694 | 723 | - | 0.495159 |
| yieL | b3719 | predicted xylanase | chromosome | CDS | 3897431 | 1197 | - | 0.495405 |
| yieM | b3745 | predicted von Willibrand factor containing protein | chromosome | CDS | 3926175 | 1452 | - | 0.527548 |
| yieN | b3746 | fused predicted transcriptional regulator: sigma54 activator protein/conserved protein | chromosome | CDS | 3927620 | 1497 | - | 0.496994 |
| yieP | b3755 | predicted transcriptional regulator | chromosome | CDS | 3938658 | 693 | - | 0.493506 |
| yifB | b3765 | predicted bifunctional enzyme and transcriptional regulator | chromosome | CDS | 3946472 | 1551 | - | 0.508059 |
| yifE | b3764 | hypothetical protein | chromosome | CDS | 3946109 | 339 | + | 0.480826 |
| yifK | b3795 | predicted transporter | chromosome | CDS | 3978910 | 1386 | + | 0.534632 |
| yifL | b4558 | predicted lipoprotein | chromosome | CDS | 3992545 | 204 | + | 0.52451 |
| yifN | b3777 | conserved protein (pseudogene) | chromosome | CDS | 3958265 | 219 | - | 0.438356 |
| yifO | b3776 | hypothetical protein | chromosome | CDS | 3958035 | 276 | - | 0.427536 |
| yigA | b3810 | hypothetical protein | chromosome | CDS | 3993606 | 708 | + | 0.55791 |
| yigB | b3812 | predicted hydrolase | chromosome | CDS | 3995206 | 717 | + | 0.55788 |
| yigE | b4482 | hypothetical protein | chromosome | CDS | 3998315 | 765 | - | 0.478431 |
| yigF | b3817 | conserved inner membrane protein | chromosome | CDS | 4000442 | 381 | - | 0.349081 |
| yigG | b3818 | predicted inner membrane protein | chromosome | CDS | 4000836 | 381 | - | 0.328084 |
| yigI | b3820 | hypothetical protein | chromosome | CDS | 4002253 | 468 | - | 0.532051 |
| yigL | b3826 | predicted hydrolase | chromosome | CDS | 4008223 | 801 | + | 0.515606 |
| yigM | b3827 | predicted inner membrane protein | chromosome | CDS | 4009099 | 900 | + | 0.555556 |
| yigP | b3834 | hypothetical protein | chromosome | CDS | 4017647 | 606 | + | 0.557756 |
| yigZ | b3848 | predicted elongation factor | chromosome | CDS | 4030515 | 615 | + | 0.556098 |
| yihA | b3865 | GTP-binding protein | chromosome | CDS | 4048156 | 597 | - | 0.529313 |
| yihD | b3858 | hypothetical protein | chromosome | CDS | 4040092 | 270 | + | 0.462963 |
| yihE | b3859 | predicted kinase | chromosome | CDS | 4040438 | 987 | + | 0.486322 |
| yihF | b3861 | hypothetical protein | chromosome | CDS | 4042222 | 1431 | + | 0.416492 |
| yihG | b3862 | predicted endonuclease | chromosome | CDS | 4043693 | 933 | - | 0.451233 |
| yihI | b3866 | hypothetical protein | chromosome | CDS | 4049370 | 510 | + | 0.523529 |
| yihL | b3872 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4058470 | 711 | + | 0.490858 |
| yihM | b3873 | predicted sugar phosphate isomerase | chromosome | CDS | 4059188 | 981 | + | 0.439348 |
| yihN | b3874 | predicted transporter | chromosome | CDS | 4060270 | 1266 | + | 0.450237 |
| yihO | b3876 | predited transporter | chromosome | CDS | 4062386 | 1404 | - | 0.450142 |
| yihP | b3877 | predicted transporter | chromosome | CDS | 4063832 | 1407 | - | 0.52381 |
| yihQ | b3878 | alpha-glucosidase | chromosome | CDS | 4065263 | 2037 | - | 0.535101 |
| yihR | b3879 | predicted aldose-1-epimerase | chromosome | CDS | 4067498 | 927 | - | 0.482201 |
| yihS | b3880 | predicted glucosamine isomerase | chromosome | CDS | 4068538 | 1242 | - | 0.533011 |
| yihT | b3881 | predicted aldolase | chromosome | CDS | 4069796 | 879 | - | 0.538112 |
| yihU | b3882 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 4070698 | 897 | - | 0.552954 |
| yihV | b3883 | predicted sugar kinase | chromosome | CDS | 4071762 | 897 | + | 0.556299 |
| yihW | b3884 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4072692 | 786 | + | 0.524173 |
| yihX | b3885 | phosphatase | chromosome | CDS | 4073576 | 600 | + | 0.505 |
| yiiD | b3888 | predicted acetyltransferase | chromosome | CDS | 4075472 | 990 | + | 0.550505 |
| yiiE | b3889 | predicted transcriptional regulator | chromosome | CDS | 4077314 | 219 | + | 0.47032 |
| yiiF | b3890 | hypothetical protein | chromosome | CDS | 4077774 | 219 | + | 0.461187 |
| yiiG | b3896 | hypothetical protein | chromosome | CDS | 4085025 | 1056 | + | 0.456439 |
| yiiL | b3901 | L-rhamnose mutarotase | chromosome | CDS | 4091147 | 315 | - | 0.507937 |
| yiiM | b3910 | hypothetical protein | chromosome | CDS | 4100845 | 675 | + | 0.53037 |
| yiiQ | b3920 | hypothetical protein | chromosome | CDS | 4109638 | 600 | - | 0.491667 |
| yiiR | b3921 | conserved inner membrane protein | chromosome | CDS | 4110338 | 441 | + | 0.494331 |
| yiiS | b3922 | hypothetical protein | chromosome | CDS | 4110990 | 300 | + | 0.463333 |
| yiiT | b3923 | stress-induced protein | chromosome | CDS | 4111316 | 429 | + | 0.431235 |
| yiiU | b3928 | hypothetical protein | chromosome | CDS | 4116538 | 246 | + | 0.48374 |
| yiiX | b3937 | predicted peptidoglycan peptidase | chromosome | CDS | 4125309 | 609 | - | 0.52381 |
| yijD | b3964 | conserved inner membrane protein | chromosome | CDS | 4159794 | 360 | + | 0.491667 |
| yijE | b3943 | predicted permease | chromosome | CDS | 4134131 | 906 | + | 0.540839 |
| yijF | b3944 | hypothetical protein | chromosome | CDS | 4135063 | 618 | - | 0.52589 |
| yijO | b3954 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4145489 | 852 | - | 0.530516 |
| yijP | b3955 | conserved inner membrane protein | chromosome | CDS | 4146555 | 1734 | - | 0.5 |
| yjaA | b4011 | hypothetical protein | chromosome | CDS | 4211257 | 384 | + | 0.453125 |
| yjaB | b4012 | predicted acetyltransferase | chromosome | CDS | 4211703 | 444 | - | 0.545045 |
| yjaG | b3999 | hypothetical protein | chromosome | CDS | 4197527 | 591 | + | 0.485618 |
| yjaH | b4001 | hypothetical protein | chromosome | CDS | 4198589 | 696 | + | 0.534483 |
| yjbA | b4030 | phosphate-starvation-inducible protein PsiE | chromosome | CDS | 4238348 | 411 | + | 0.491484 |
| yjbB | b4020 | predicted transporter | chromosome | CDS | 4225754 | 1632 | + | 0.553309 |
| yjbC | b4022 | 23S rRNA pseudouridine synthase | chromosome | CDS | 4228377 | 873 | + | 0.515464 |
| yjbD | b4023 | hypothetical protein | chromosome | CDS | 4229382 | 273 | - | 0.494505 |
| yjbE | b4026 | hypothetical protein | chromosome | CDS | 4233929 | 243 | + | 0.604938 |
| yjbF | b4027 | predicted lipoprotein | chromosome | CDS | 4234285 | 639 | + | 0.547731 |
| yjbG | b4028 | hypothetical protein | chromosome | CDS | 4234920 | 738 | + | 0.586721 |
| yjbH | b4029 | predicted porin | chromosome | CDS | 4235657 | 2097 | + | 0.540296 |
| yjbI | b4038 | hypothetical protein | chromosome | CDS | 4248978 | 1329 | + | 0.331828 |
| yjbJ | b4045 | predicted stress response protein | chromosome | CDS | 4257260 | 210 | + | 0.42381 |
| yjbL | b4047 | hypothetical protein | chromosome | CDS | 4258344 | 255 | + | 0.286275 |
| yjbM | b4048 | hypothetical protein | chromosome | CDS | 4258622 | 708 | + | 0.365819 |
| yjbN | b4049 | tRNA-dihydrouridine synthase A | chromosome | CDS | 4259692 | 1038 | + | 0.536609 |
| yjbO | b4050 | phage shock protein G | chromosome | CDS | 4260863 | 243 | + | 0.497942 |
| yjbQ | b4056 | hypothetical protein | chromosome | CDS | 4268261 | 417 | + | 0.517986 |
| yjbR | b4057 | hypothetical protein | chromosome | CDS | 4268681 | 357 | + | 0.504202 |
| yjcB | b4060 | predicted inner membrane protein | chromosome | CDS | 4272783 | 282 | - | 0.524823 |
| yjcC | b4061 | predicted signal transduction protein (EAL domain containing protein) | chromosome | CDS | 4273494 | 1587 | + | 0.447385 |
| yjcD | b4064 | predicted permease | chromosome | CDS | 4276502 | 1350 | + | 0.559259 |
| yjcE | b4065 | predicted cation/proton antiporter | chromosome | CDS | 4278003 | 1650 | + | 0.558182 |
| yjcF | b4066 | hypothetical protein | chromosome | CDS | 4279806 | 1293 | - | 0.329466 |
| yjcH | b4068 | conserved inner membrane protein involved in acetate transport | chromosome | CDS | 4282922 | 315 | - | 0.492063 |
| yjcO | b4078 | hypothetical protein | chromosome | CDS | 4294459 | 690 | - | 0.497101 |
| yjcP | b4080 | predicted outer membrane factor of efflux pump | chromosome | CDS | 4297587 | 1467 | - | 0.557601 |
| yjcQ | b4081 | predicted multidrug efflux system component | chromosome | CDS | 4299050 | 2052 | - | 0.545322 |
| yjcR | b4082 | predicted membrane fusion protein of efflux pump | chromosome | CDS | 4301101 | 1032 | - | 0.559109 |
| yjcS | b4083 | predicted alkyl sulfatase | chromosome | CDS | 4302635 | 1986 | - | 0.529204 |
| yjcZ | b4110 | hypothetical protein | chromosome | CDS | 4327383 | 879 | + | 0.568828 |
| yjdA | b4109 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 4325158 | 2229 | + | 0.514581 |
| yjdC | b4135 | predicted transcriptional regulator | chromosome | CDS | 4360756 | 576 | - | 0.53125 |
| yjdF | b4121 | conserved inner membrane protein | chromosome | CDS | 4342952 | 630 | - | 0.549206 |
| yjdI | b4126 | hypothetical protein | chromosome | CDS | 4349866 | 231 | + | 0.489177 |
| yjdJ | b4127 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 4350108 | 273 | + | 0.410256 |
| yjdK | b4128 | hypothetical protein | chromosome | CDS | 4350607 | 297 | + | 0.350168 |
| yjdL | b4130 | predicted transporter | chromosome | CDS | 4352977 | 1458 | - | 0.510974 |
| yjdO | b4559 | hypothetical protein | chromosome | CDS | 4350931 | 174 | + | 0.350575 |
| yjdP | b4487 | hypothetical protein | chromosome | CDS | 4311891 | 330 | + | 0.560606 |
| yjeB | b4178 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4404213 | 426 | + | 0.483568 |
| yjeE | b4168 | ATPase with strong ADP affinity | chromosome | CDS | 4393608 | 462 | + | 0.52381 |
| yjeF | b4167 | predicted carbohydrate kinase | chromosome | CDS | 4392089 | 1548 | + | 0.571059 |
| yjeH | b4141 | predicted transporter | chromosome | CDS | 4367179 | 1257 | - | 0.522673 |
| yjeI | b4144 | hypothetical protein | chromosome | CDS | 4370832 | 354 | + | 0.553672 |
| yjeJ | b4145 | hypothetical protein | chromosome | CDS | 4371388 | 870 | - | 0.451724 |
| yjeK | b4146 | predicted lysine aminomutase | chromosome | CDS | 4372652 | 1029 | - | 0.526725 |
| yjeM | b4156 | predicted transporter | chromosome | CDS | 4381862 | 1503 | + | 0.471058 |
| yjeN | b4157 | hypothetical protein | chromosome | CDS | 4383416 | 315 | + | 0.501587 |
| yjeO | b4158 | conserved inner membrane protein | chromosome | CDS | 4383727 | 315 | + | 0.479365 |
| yjeP | b4159 | predicted mechanosensitive channel | chromosome | CDS | 4384070 | 3324 | - | 0.557461 |
| yjeS | b4166 | predicted Fe-S electron transport protein | chromosome | CDS | 4390951 | 1140 | - | 0.526316 |
| yjeT | b4176 | conserved inner membrane protein | chromosome | CDS | 4402409 | 198 | + | 0.489899 |
| yjfC | b4186 | predicted synthetase/amidase | chromosome | CDS | 4411051 | 1164 | + | 0.52921 |
| yjfF | b4231 | predicted sugar transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 4451606 | 996 | + | 0.518072 |
| yjfI | b4181 | hypothetical protein | chromosome | CDS | 4408156 | 402 | + | 0.385572 |
| yjfJ | b4182 | predicted transcriptional regulator effector protein | chromosome | CDS | 4408576 | 699 | + | 0.513591 |
| yjfK | b4183 | hypothetical protein | chromosome | CDS | 4409325 | 660 | + | 0.474242 |
| yjfL | b4184 | conserved inner membrane protein | chromosome | CDS | 4410002 | 399 | + | 0.43609 |
| yjfM | b4185 | hypothetical protein | chromosome | CDS | 4410410 | 639 | + | 0.489828 |
| yjfN | b4188 | hypothetical protein | chromosome | CDS | 4414040 | 276 | - | 0.51087 |
| yjfO | b4189 | hypothetical protein | chromosome | CDS | 4414464 | 330 | - | 0.487879 |
| yjfP | b4190 | predicted hydrolase | chromosome | CDS | 4414975 | 750 | + | 0.532 |
| yjfY | b4199 | hypothetical protein | chromosome | CDS | 4422539 | 276 | - | 0.460145 |
| yjfZ | b4204 | hypothetical protein | chromosome | CDS | 4424651 | 795 | - | 0.423899 |
| yjgA | b4234 | hypothetical protein | chromosome | CDS | 4455337 | 552 | - | 0.528986 |
| yjgB | b4269 | predicted alcohol dehydrogenase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 4493213 | 1020 | - | 0.555882 |
| yjgD | b4255 | hypothetical protein | chromosome | CDS | 4476496 | 417 | + | 0.489209 |
| yjgF | b4243 | ketoacid-binding protein | chromosome | CDS | 4468550 | 387 | - | 0.529716 |
| yjgH | b4248 | predicted mRNA endoribonuclease | chromosome | CDS | 4470837 | 396 | - | 0.472222 |
| yjgI | b4249 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 4471363 | 714 | - | 0.543417 |
| yjgJ | b4251 | predicted transcriptional regulator | chromosome | CDS | 4472147 | 594 | + | 0.491582 |
| yjgK | b4252 | hypothetical protein | chromosome | CDS | 4472885 | 453 | + | 0.501104 |
| yjgL | b4253 | hypothetical protein | chromosome | CDS | 4473460 | 1815 | + | 0.321763 |
| yjgM | b4256 | predicted acetyltransferase | chromosome | CDS | 4477057 | 504 | - | 0.519841 |
| yjgN | b4257 | conserved inner membrane protein | chromosome | CDS | 4477753 | 1197 | + | 0.370927 |
| yjgP | b4261 | conserved inner membrane protein | chromosome | CDS | 4484241 | 1101 | + | 0.547684 |
| yjgQ | b4262 | conserved inner membrane protein | chromosome | CDS | 4485341 | 1083 | + | 0.542936 |
| yjgR | b4263 | predicted ATPase | chromosome | CDS | 4486584 | 1503 | - | 0.537591 |
| yjgW | b4274 | KpLE2 phage-like element; predicted protein | chromosome | CDS | 4497622 | 336 | + | 0.46131 |
| yjgX | b4575 | chromosome | pseudo | 4497700 | 1115 | - | 0.485202 | |
| yjgX | b4575 | chromosome | pseudo | 4497700 | 1115 | - | 0.485202 | |
| yjgX_1 | b4276 | chromosome | pseudo | 4498455 | 360 | - | 0.497222 | |
| yjgX_2 | b4275 | chromosome | pseudo | 4498066 | 447 | - | 0.489933 | |
| yjgX_3 | b4560 | chromosome | pseudo | 4497700 | 243 | - | 0.465021 | |
| yjgZ | b4277 | KpLE2 phage-like element; predicted protein | chromosome | CDS | 4499283 | 330 | + | 0.581818 |
| yjhA | b4311 | N-acetylnuraminic acid outer membrane channel protein | chromosome | CDS | 4536808 | 717 | - | 0.429568 |
| yjhB | b4279 | KpLE2 phage-like element; predicted transporter | chromosome | CDS | 4502081 | 1218 | + | 0.36289 |
| yjhC | b4280 | KpLE2 phage-like element; predicted oxidoreductase | chromosome | CDS | 4503310 | 1119 | + | 0.386953 |
| yjhD | b4281 | KpLE2 phage-like element; predicted protein (pseudogene) | chromosome | CDS | 4504649 | 231 | - | 0.47619 |
| yjhE | b4282 | KpLE2 phage-like element; predicted membrane protein (pseudogene) | chromosome | CDS | 4504884 | 249 | + | 0.485944 |
| yjhF | b4296 | KpLE2 phage-like element; predicted transporter | chromosome | CDS | 4518694 | 1350 | - | 0.49037 |
| yjhG | b4297 | KpLE2 phage-like element; predicted dehydratase | chromosome | CDS | 4520150 | 1968 | - | 0.545224 |
| yjhH | b4298 | KpLE2 phage-like element; predicted lyase/synthase | chromosome | CDS | 4522128 | 906 | - | 0.52649 |
| yjhI | b4299 | KpLE2 phage-like element; predicted DNA-binding transcriptional regulator | chromosome | CDS | 4523038 | 789 | - | 0.408112 |
| yjhP | b4306 | KpLE2 phage-like element; predicted methyltransferase | chromosome | CDS | 4530460 | 747 | - | 0.595716 |
| yjhQ | b4307 | KpLE2 phage-like element; predicted acetyltransferase | chromosome | CDS | 4531262 | 546 | - | 0.553114 |
| yjhR | b4308 | KpLE2 phage-like element; predicted frameshift suppressor | chromosome | CDS | 4533038 | 1017 | + | 0.437561 |
| yjhS | b4309 | hypothetical protein | chromosome | CDS | 4534637 | 981 | - | 0.487258 |
| yjhT | b4310 | hypothetical protein | chromosome | CDS | 4535682 | 1107 | - | 0.441734 |
| yjhU | b4295 | KpLE2 phage-like element; predicted DNA-binding transcriptional regulator | chromosome | CDS | 4517361 | 987 | - | 0.503546 |
| yjhV | b4286 | KpLE2 phage-like element; predicted protein | chromosome | CDS | 4507743 | 414 | + | 0.521739 |
| yjhW | b4562 | chromosome | pseudo | 4507574 | 243 | + | 0.489712 | |
| yjhW | b4562 | chromosome | pseudo | 4507574 | 243 | + | 0.489712 | |
| yjhX | b4566 | hypothetical protein | chromosome | CDS | 4531819 | 258 | - | 0.496124 |
| yjiA | b4352 | predicted GTPase | chromosome | CDS | 4585932 | 957 | - | 0.546499 |
| yjiC | b4325 | hypothetical protein | chromosome | CDS | 4553513 | 831 | - | 0.401925 |
| yjiD | b4326 | DNA replication/recombination/repair protein | chromosome | CDS | 4555016 | 393 | + | 0.48855 |
| yjiE | b4327 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4555401 | 912 | - | 0.513158 |
| yjiG | b4329 | conserved inner membrane protein | chromosome | CDS | 4557562 | 462 | - | 0.532468 |
| yjiH | b4330 | conserved inner membrane protein | chromosome | CDS | 4558020 | 684 | - | 0.530702 |
| yjiJ | b4332 | predicted inner membrane protein | chromosome | CDS | 4559520 | 1179 | - | 0.535199 |
| yjiK | b4333 | hypothetical protein | chromosome | CDS | 4560766 | 969 | - | 0.428277 |
| yjiL | b4334 | predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase | chromosome | CDS | 4561945 | 768 | - | 0.565104 |
| yjiM | b4335 | predicted 2-hydroxyglutaryl-CoA dehydratase | chromosome | CDS | 4562722 | 1152 | - | 0.53559 |
| yjiN | b4336 | conserved inner membrane protein | chromosome | CDS | 4563989 | 1281 | - | 0.526151 |
| yjiO | b4337 | multidrug efflux system protein | chromosome | CDS | 4565310 | 1233 | - | 0.537713 |
| yjiP | b4338 | predicted transposase (pseudogene) | chromosome | CDS | 4567021 | 312 | + | 0.474359 |
| yjiQ | b4339 | predicted transposase | chromosome | CDS | 4567381 | 561 | + | 0.490196 |
| yjiR | b4340 | fused predicted DNA-binding transcriptional regulator/predicted aminotransferase | chromosome | CDS | 4568185 | 1413 | - | 0.550602 |
| yjiS | b4341 | hypothetical protein | chromosome | CDS | 4569774 | 165 | + | 0.557576 |
| yjiT | b4342 | hypothetical protein | chromosome | CDS | 4570437 | 1518 | + | 0.444664 |
| yjiV | b4486 | conserved protein (pseudogene) | chromosome | CDS | 4572158 | 2721 | + | 0.501286 |
| yjiW | b4347 | hypothetical protein | chromosome | CDS | 4577522 | 399 | - | 0.546366 |
| yjiX | b4353 | hypothetical protein | chromosome | CDS | 4586899 | 204 | - | 0.504902 |
| yjiY | b4354 | predicted inner membrane protein | chromosome | CDS | 4587152 | 2151 | - | 0.560669 |
| yjiZ | b4356 | predicted transporter | chromosome | CDS | 4591384 | 1362 | - | 0.519824 |
| yjjA | b4360 | hypothetical protein | chromosome | CDS | 4597718 | 495 | - | 0.50505 |
| yjjB | b4363 | conserved inner membrane protein | chromosome | CDS | 4599647 | 327 | - | 0.480122 |
| yjjG | b4374 | nucleotidase | chromosome | CDS | 4606669 | 678 | + | 0.535398 |
| yjjI | b4380 | hypothetical protein | chromosome | CDS | 4613538 | 1551 | - | 0.53127 |
| yjjJ | b4385 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4619792 | 1332 | + | 0.538288 |
| yjjK | b4391 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 4626878 | 1668 | - | 0.547362 |
| yjjM | b4357 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4592960 | 915 | - | 0.474317 |
| yjjN | b4358 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 4594013 | 1023 | + | 0.508309 |
| yjjP | b4364 | predicted inner membrane protein | chromosome | CDS | 4600111 | 771 | - | 0.516213 |
| yjjQ | b4365 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4601500 | 726 | + | 0.450413 |
| yjjU | b4377 | predicted esterase | chromosome | CDS | 4610434 | 1074 | + | 0.539106 |
| yjjV | b4378 | predicted DNase | chromosome | CDS | 4611504 | 780 | + | 0.555128 |
| yjjW | b4379 | predicted pyruvate formate lyase activating enzyme | chromosome | CDS | 4612703 | 864 | - | 0.563657 |
| yjjX | b4394 | NTPase | chromosome | CDS | 4631256 | 513 | - | 0.561404 |
| yjjY | b4402 | hypothetical protein | chromosome | CDS | 4638425 | 141 | + | 0.425532 |
| yjjZ | b4567 | hypothetical protein | chromosome | CDS | 4603827 | 237 | + | 0.481013 |
| yjtD | b4403 | predicted rRNA methyltransferase | chromosome | CDS | 4638965 | 687 | + | 0.497817 |
| ykfA | b0253 | CP4-6 prophage; predicted GTP-binding protein | chromosome | CDS | 267321 | 864 | - | 0.568287 |
| ykfB | b0250 | CP4-6 prophage; predicted protein | chromosome | CDS | 264844 | 468 | - | 0.525641 |
| ykfC | b0258 | CP4-6 prophage; conserved protein | chromosome | CDS | 272071 | 1146 | + | 0.545375 |
| ykfF | b0249 | CP4-6 prophage; predicted protein | chromosome | CDS | 264528 | 240 | - | 0.5875 |
| ykfG | b0247 | CP4-6 prophage; predicted DNA repair protein | chromosome | CDS | 263480 | 477 | - | 0.584906 |
| ykfH | b4504 | hypothetical protein | chromosome | CDS | 263250 | 222 | - | 0.558559 |
| ykfI | b0245 | CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system | chromosome | CDS | 262552 | 342 | - | 0.511696 |
| ykfJ | b0235 | hypothetical protein | chromosome | CDS | 253467 | 267 | + | 0.520599 |
| ykgA | b0300 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 315674 | 687 | - | 0.430859 |
| ykgB | b0301 | conserved inner membrane protein | chromosome | CDS | 316950 | 594 | - | 0.449495 |
| ykgC | b0304 | pyridine nucleotide-disulfide oxidoreductase | chromosome | CDS | 317900 | 1326 | - | 0.455505 |
| ykgD | b0305 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 319451 | 855 | + | 0.512281 |
| ykgE | b0306 | predicted oxidoreductase | chromosome | CDS | 320832 | 720 | + | 0.505556 |
| ykgF | b0307 | predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain | chromosome | CDS | 321562 | 1428 | + | 0.502101 |
| ykgG | b0308 | predicted transporter | chromosome | CDS | 322982 | 696 | + | 0.521552 |
| ykgH | b0310 | predicted inner membrane protein | chromosome | CDS | 323920 | 669 | - | 0.369208 |
| ykgI | b0303 | hypothetical protein | chromosome | CDS | 317555 | 237 | - | 0.35443 |
| ykgJ | b0288 | predicted ferredoxin | chromosome | CDS | 303077 | 330 | - | 0.50303 |
| ykgK | b0294 | predicted regulator | chromosome | CDS | 309970 | 591 | - | 0.390863 |
| ykgL | b0295 | hypothetical protein | chromosome | CDS | 311336 | 228 | + | 0.438596 |
| ykgM | b0296 | 50S ribosomal protein L31 | chromosome | CDS | 311738 | 264 | - | 0.458333 |
| ykgN | b4505 | predicted IS protein | chromosome | CDS | 279248 | 339 | - | 0.451327 |
| ykgO | b4506 | rpmJ (L36) paralog | chromosome | CDS | 311598 | 141 | - | 0.41844 |
| ykiA | b0392 | hypothetical protein | chromosome | CDS | 407893 | 282 | + | 0.485816 |
| ykiB | b0370 | hypothetical protein | chromosome | CDS | 389121 | 219 | - | 0.278539 |
| ylaB | b0457 | conserved inner membrane protein | chromosome | CDS | 476291 | 1551 | - | 0.480335 |
| ylaC | b0458 | predicted inner membrane protein | chromosome | CDS | 478005 | 471 | - | 0.471338 |
| ylbA | b0515 | hypothetical protein | chromosome | CDS | 542485 | 786 | - | 0.461832 |
| ylbE | b4572 | chromosome | pseudo | 547581 | 1259 | + | 0.571088 | |
| ylbE | b4572 | chromosome | pseudo | 547581 | 1259 | + | 0.571088 | |
| ylbE_1 | b4507 | chromosome | pseudo | 547581 | 261 | + | 0.56705 | |
| ylbE_2 | b0519 | chromosome | pseudo | 547838 | 1002 | + | 0.571856 | |
| ylbF | b0520 | hypothetical protein | chromosome | CDS | 548850 | 816 | + | 0.568627 |
| ylbG | b0502 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 528869 | 372 | - | 0.502688 |
| ylbH | b0499 | conserved protein, rhs-like | chromosome | CDS | 527173 | 711 | + | 0.445851 |
| ylcE | b0563 | DLP12 prophage; predicted protein | chromosome | CDS | 582098 | 186 | + | 0.494624 |
| ylcG | b4509 | DLP12 prophage; predicted protein | chromosome | CDS | 572953 | 141 | + | 0.475177 |
| yliA | b0829 | fused predicted peptide transport subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 866776 | 1839 | + | 0.541599 |
| yliB | b0830 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 868634 | 1539 | + | 0.522417 |
| yliC | b0831 | predicted peptide transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 870190 | 921 | + | 0.535288 |
| yliD | b0832 | predicted peptide transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 871113 | 912 | + | 0.530702 |
| yliE | b0833 | conserved inner membrane protein | chromosome | CDS | 872202 | 2349 | + | 0.415922 |
| yliF | b0834 | predicted diguanylate cyclase | chromosome | CDS | 874558 | 1329 | + | 0.434913 |
| yliG | b0835 | predicted SAM-dependent methyltransferase | chromosome | CDS | 875933 | 1326 | - | 0.526395 |
| yliH | b0836 | hypothetical protein | chromosome | CDS | 877471 | 384 | + | 0.486979 |
| yliI | b0837 | predicted dehydrogenase | chromosome | CDS | 877965 | 1116 | + | 0.517025 |
| yliJ | b0838 | predicted glutathione S-transferase | chromosome | CDS | 879077 | 627 | - | 0.519936 |
| yliK | b2917 | methylmalonyl-CoA mutase | chromosome | CDS | 3058872 | 2145 | + | 0.54965 |
| yliL | b0816 | hypothetical protein | chromosome | CDS | 851894 | 270 | + | 0.507407 |
| ymbA | b0952 | hypothetical protein | chromosome | CDS | 1014134 | 549 | + | 0.526412 |
| ymcA | b0984 | hypothetical protein | chromosome | CDS | 1045072 | 2097 | - | 0.51979 |
| ymcB | b0985 | hypothetical protein | chromosome | CDS | 1047168 | 747 | - | 0.523427 |
| ymcC | b0986 | predicted outer membrane lipoprotein | chromosome | CDS | 1047911 | 645 | - | 0.475969 |
| ymcD | b0987 | hypothetical protein | chromosome | CDS | 1048662 | 306 | - | 0.575163 |
| ymcE | b0991 | cold shock gene | chromosome | CDS | 1051070 | 231 | + | 0.415584 |
| ymdA | b1044 | hypothetical protein | chromosome | CDS | 1104637 | 312 | + | 0.435897 |
| ymdB | b1045 | hypothetical protein | chromosome | CDS | 1105043 | 534 | + | 0.516854 |
| ymdC | b1046 | predicted hydrolase | chromosome | CDS | 1105578 | 1422 | + | 0.507032 |
| ymdE | b1028 | hypothetical protein | chromosome | CDS | 1094767 | 303 | + | 0.412541 |
| ymdF | b4518 | hypothetical protein | chromosome | CDS | 1067304 | 174 | + | 0.511494 |
| ymfA | b1122 | predicted inner membrane protein | chromosome | CDS | 1180487 | 462 | - | 0.435065 |
| ymfB | b1134 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase | chromosome | CDS | 1193050 | 462 | - | 0.502164 |
| ymfC | b1135 | 23S rRNA pseudouridine synthase | chromosome | CDS | 1193521 | 654 | - | 0.512232 |
| ymfD | b1137 | e14 prophage; predicted SAM-dependent methyltransferase | chromosome | CDS | 1196090 | 666 | - | 0.348348 |
| ymfE | b1138 | e14 prophage; predicted inner membrane protein | chromosome | CDS | 1196756 | 705 | - | 0.30922 |
| ymfG | b1141 | e14 prophage; predicted excisionase | chromosome | CDS | 1200010 | 246 | - | 0.443089 |
| ymfH | b1142 | e14 prophage; predicted protein | chromosome | CDS | 1200292 | 312 | - | 0.541667 |
| ymfI | b1143 | e14 prophage; predicted protein | chromosome | CDS | 1200720 | 342 | + | 0.385965 |
| ymfJ | b1144 | e14 prophage; predicted protein | chromosome | CDS | 1200999 | 309 | - | 0.469256 |
| ymfK | b1145 | e14 prophage; repressor protein phage e14 | chromosome | CDS | 1201482 | 675 | - | 0.444444 |
| ymfL | b1147 | e14 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1202479 | 570 | + | 0.494737 |
| ymfM | b1148 | e14 prophage; predicted protein | chromosome | CDS | 1203045 | 339 | + | 0.498525 |
| ymfN | b1149 | e14 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1203393 | 1368 | + | 0.543129 |
| ymfO | b1151 | e14 prophage; conserved protein | chromosome | CDS | 1204954 | 474 | + | 0.563291 |
| ymfP | b1152 | e14 prophage; conserved protein | chromosome | CDS | 1205483 | 663 | + | 0.571644 |
| ymfQ | b1153 | e14 prophage; conserved protein | chromosome | CDS | 1206136 | 585 | + | 0.57265 |
| ymfR | b1150 | e14 prophage; predicted protein | chromosome | CDS | 1204772 | 183 | + | 0.601093 |
| ymfS | b1155 | e14 prophage; predicted protein | chromosome | CDS | 1207355 | 414 | + | 0.42029 |
| ymfT | b1146 | e14 prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1202247 | 201 | + | 0.427861 |
| ymgA | b1165 | hypothetical protein | chromosome | CDS | 1215291 | 273 | + | 0.369963 |
| ymgB | b1166 | hypothetical protein | chromosome | CDS | 1215592 | 267 | + | 0.348315 |
| ymgC | b1167 | hypothetical protein | chromosome | CDS | 1215971 | 249 | + | 0.35743 |
| ymgD | b1171 | hypothetical protein | chromosome | CDS | 1221528 | 330 | - | 0.451515 |
| ymgE | b1195 | predicted inner membrane protein | chromosome | CDS | 1243951 | 255 | + | 0.533333 |
| ymgF | b4520 | hypothetical protein | chromosome | CDS | 1218206 | 219 | + | 0.401826 |
| ymgG | b1172 | hypothetical protein | chromosome | CDS | 1221867 | 276 | - | 0.532609 |
| ymgH | b4521 | hypothetical protein | chromosome | CDS | 1222688 | 222 | + | 0.504505 |
| ymjA | b1295 | hypothetical protein | chromosome | CDS | 1355447 | 246 | - | 0.48374 |
| ymjB | b4524 | chromosome | pseudo | 1379813 | 114 | + | 0.368421 | |
| ymjC | b4525 | chromosome | pseudo | 1388704 | 183 | - | 0.398907 | |
| ymjC | b4525 | chromosome | pseudo | 1388704 | 183 | - | 0.398907 | |
| ynaA | b1368 | Rac prophage; predicted tail protein | chromosome | CDS | 1424478 | 1029 | + | 0.468416 |
| ynaE | b1375 | Rac prophage; predicted DNA-binding transcriptional regulator | chromosome | CDS | 1432015 | 267 | - | 0.337079 |
| ynaI | b1330 | conserved inner membrane protein | chromosome | CDS | 1392915 | 1032 | - | 0.432171 |
| ynaJ | b1332 | predicted inner membrane protein | chromosome | CDS | 1395389 | 258 | + | 0.453488 |
| ynaK | b1365 | Rac prophage; conserved protein | chromosome | CDS | 1423401 | 264 | + | 0.481061 |
| ynbA | b1408 | predicted inner membrane protein | chromosome | CDS | 1475645 | 606 | + | 0.465347 |
| ynbB | b1409 | predicted CDP-diglyceride synthase | chromosome | CDS | 1476250 | 897 | + | 0.435897 |
| ynbC | b1410 | predicted hydrolase | chromosome | CDS | 1477162 | 1758 | + | 0.509101 |
| ynbD | b1411 | predicted phosphatase, inner membrane protein | chromosome | CDS | 1478933 | 1293 | + | 0.5058 |
| ynbE | b1382 | predicted lipoprotein | chromosome | CDS | 1443711 | 186 | + | 0.430108 |
| yncA | b1448 | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 1516352 | 519 | - | 0.531792 |
| yncB | b1449 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 1517051 | 1038 | + | 0.523121 |
| yncC | b1450 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1518286 | 666 | + | 0.436937 |
| yncD | b1451 | predicted iron outer membrane transporter | chromosome | CDS | 1518987 | 2103 | - | 0.510699 |
| yncE | b1452 | hypothetical protein | chromosome | CDS | 1521331 | 1062 | + | 0.506591 |
| yncG | b1454 | predicted enzyme | chromosome | CDS | 1524271 | 618 | + | 0.47411 |
| yncH | b1455 | hypothetical protein | chromosome | CDS | 1524964 | 213 | + | 0.314554 |
| yncI | b1458 | hypothetical protein | chromosome | CDS | 1528610 | 747 | + | 0.380187 |
| yncJ | b1436 | hypothetical protein | chromosome | CDS | 1506858 | 231 | - | 0.489177 |
| yncK | b4578 | chromosome | pseudo | 1501167 | 507 | - | 0.4714 | |
| yncK | b4578 | chromosome | pseudo | 1501167 | 507 | - | 0.4714 | |
| yncK_1 | b4531 | chromosome | pseudo | 1501386 | 288 | - | 0.440972 | |
| yncK_2 | b4530 | chromosome | pseudo | 1501167 | 168 | - | 0.529762 | |
| yncM | b1459 | hypothetical protein | chromosome | CDS | 1529400 | 201 | + | 0.40796 |
| yncN | b4532 | hypothetical protein | chromosome | CDS | 1507310 | 177 | + | 0.491525 |
| yneE | b1520 | conserved inner membrane protein | chromosome | CDS | 1606132 | 915 | - | 0.479781 |
| yneF | b1522 | predicted diguanylate cyclase | chromosome | CDS | 1608931 | 948 | - | 0.504219 |
| yneG | b1523 | hypothetical protein | chromosome | CDS | 1609990 | 360 | - | 0.527778 |
| yneH | b1524 | predicted glutaminase | chromosome | CDS | 1610349 | 927 | - | 0.519957 |
| yneI | b1525 | predicted aldehyde dehydrogenase | chromosome | CDS | 1611339 | 1389 | - | 0.530598 |
| yneJ | b1526 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1612828 | 882 | + | 0.535147 |
| yneK | b1527 | hypothetical protein | chromosome | CDS | 1613787 | 1116 | + | 0.397849 |
| yneL | b1506 | predicted transcriptional regulator | chromosome | CDS | 1588381 | 180 | - | 0.466667 |
| ynfA | b1582 | hypothetical protein | chromosome | CDS | 1653371 | 327 | - | 0.51682 |
| ynfB | b1583 | hypothetical protein | chromosome | CDS | 1653832 | 342 | + | 0.511696 |
| ynfC | b1585 | hypothetical protein | chromosome | CDS | 1654771 | 711 | - | 0.437412 |
| ynfD | b1586 | hypothetical protein | chromosome | CDS | 1655589 | 306 | + | 0.562092 |
| ynfE | b1587 | oxidoreductase subunit | chromosome | CDS | 1656093 | 2427 | + | 0.507623 |
| ynfF | b1588 | oxidoreductase subunit | chromosome | CDS | 1658580 | 2424 | + | 0.511964 |
| ynfG | b1589 | oxidoreductase, Fe-S subunit | chromosome | CDS | 1661014 | 618 | + | 0.529126 |
| ynfH | b1590 | oxidoreductase, membrane subunit | chromosome | CDS | 1661633 | 855 | + | 0.526316 |
| ynfK | b1593 | predicted dethiobiotin synthetase | chromosome | CDS | 1664548 | 696 | - | 0.521552 |
| ynfL | b1595 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1666723 | 894 | - | 0.526846 |
| ynfM | b1596 | predicted transporter | chromosome | CDS | 1667723 | 1254 | + | 0.529506 |
| ynfN | b1551 | Qin prophage; predicted protein | chromosome | CDS | 1635978 | 156 | - | 0.435897 |
| ynfO | b4533 | Qin prophage; predicted protein | chromosome | CDS | 1634780 | 234 | + | 0.444444 |
| ynfP | b4534 | chromosome | pseudo | 1650752 | 111 | - | 0.423423 | |
| ynfP | b4534 | chromosome | pseudo | 1650752 | 111 | - | 0.423423 | |
| ynhG | b1678 | hypothetical protein | chromosome | CDS | 1755745 | 1005 | - | 0.518408 |
| yniA | b1725 | predicted phosphotransferase/kinase | chromosome | CDS | 1805820 | 861 | + | 0.519164 |
| yniB | b1726 | predicted inner membrane protein | chromosome | CDS | 1806721 | 537 | - | 0.439479 |
| yniC | b1727 | predicted hydrolase | chromosome | CDS | 1807404 | 669 | + | 0.51719 |
| yniD | b4535 | hypothetical protein | chromosome | CDS | 1803174 | 123 | + | 0.487805 |
| ynjA | b1753 | hypothetical protein | chromosome | CDS | 1833539 | 549 | + | 0.562842 |
| ynjB | b1754 | hypothetical protein | chromosome | CDS | 1834097 | 1167 | + | 0.563839 |
| ynjC | b1755 | fused transporter subunits of ABC superfamily: membrane components | chromosome | CDS | 1835281 | 1491 | + | 0.570087 |
| ynjD | b1756 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 1836771 | 654 | + | 0.510703 |
| ynjE | b1757 | predicted thiosulfate sulfur transferase | chromosome | CDS | 1837491 | 1308 | + | 0.535168 |
| ynjF | b1758 | predicted phosphatidyl transferase, inner membrane protein | chromosome | CDS | 1838807 | 621 | - | 0.534622 |
| ynjH | b1760 | hypothetical protein | chromosome | CDS | 1839887 | 273 | - | 0.505495 |
| ynjI | b1762 | predicted inner membrane protein | chromosome | CDS | 1841855 | 1041 | - | 0.413064 |
| yoaA | b1808 | conserved protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1889349 | 1911 | - | 0.552067 |
| yoaB | b1809 | hypothetical protein | chromosome | CDS | 1891391 | 345 | + | 0.515942 |
| yoaC | b1810 | hypothetical protein | chromosome | CDS | 1892097 | 360 | + | 0.416667 |
| yoaD | b1815 | predicted phosphodiesterase | chromosome | CDS | 1896451 | 1599 | + | 0.505316 |
| yoaE | b1816 | fused predicted membrane protein/conserved protein | chromosome | CDS | 1898053 | 1557 | - | 0.538857 |
| yoaF | b1793 | conserved outer membrane protein | chromosome | CDS | 1875302 | 255 | - | 0.52549 |
| yoaG | b1796 | hypothetical protein | chromosome | CDS | 1877427 | 183 | - | 0.459016 |
| yoaH | b1811 | hypothetical protein | chromosome | CDS | 1892576 | 180 | - | 0.561111 |
| yoaI | b1788 | hypothetical protein | chromosome | CDS | 1872102 | 105 | - | 0.428571 |
| yobA | b1841 | hypothetical protein | chromosome | CDS | 1922619 | 375 | - | 0.498667 |
| yobB | b1843 | hypothetical protein | chromosome | CDS | 1923464 | 657 | + | 0.520548 |
| yobD | b1820 | hypothetical protein | chromosome | CDS | 1902825 | 459 | + | 0.45098 |
| yobF | b1824 | hypothetical protein | chromosome | CDS | 1905472 | 144 | - | 0.423611 |
| yobG | b1826 | hypothetical protein | chromosome | CDS | 1906647 | 144 | - | 0.465278 |
| yobH | b4536 | hypothetical protein | chromosome | CDS | 1906949 | 240 | + | 0.4375 |
| yodA | b1973 | conserved metal-binding protein | chromosome | CDS | 2039399 | 651 | + | 0.382488 |
| yodB | b1974 | predicted cytochrome | chromosome | CDS | 2040392 | 531 | + | 0.421846 |
| yodC | b1957 | hypothetical protein | chromosome | CDS | 2026212 | 183 | - | 0.530055 |
| yodD | b1953 | hypothetical protein | chromosome | CDS | 2023010 | 228 | + | 0.486842 |
| yoeA | b4582 | chromosome | pseudo | 2066659 | 1840 | + | 0.51087 | |
| yoeA | b4582 | chromosome | pseudo | 2066659 | 1840 | + | 0.51087 | |
| yoeA_1 | b1995 | chromosome | pseudo | 2066659 | 393 | + | 0.458015 | |
| yoeA_2 | b1998 | chromosome | pseudo | 2068268 | 261 | + | 0.471264 | |
| yoeB | b4539 | toxin of the YoeB-YefM toxin-antitoxin system | chromosome | CDS | 2087235 | 255 | - | 0.443137 |
| yoeF | b4538 | hypothetical protein | chromosome | CDS | 2076599 | 357 | + | 0.484594 |
| yohC | b2135 | predicted inner membrane protein | chromosome | CDS | 2223066 | 588 | - | 0.535714 |
| yohD | b2136 | conserved inner membrane protein | chromosome | CDS | 2223823 | 579 | + | 0.544041 |
| yohF | b2137 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2224531 | 762 | - | 0.551181 |
| yohG | b2138 | predicted outer membrane protein | chromosome | CDS | 2225345 | 1089 | - | 0.557392 |
| yohH | b2139 | hypothetical protein | chromosome | CDS | 2226571 | 138 | - | 0.528986 |
| yohJ | b2141 | hypothetical protein | chromosome | CDS | 2228646 | 399 | + | 0.493734 |
| yohK | b2142 | predicted inner membrane protein | chromosome | CDS | 2229041 | 696 | + | 0.534483 |
| yohL | b2105 | hypothetical protein | chromosome | CDS | 2183546 | 273 | - | 0.483516 |
| yohM | b2106 | membrane protein conferring nickel and cobalt resistance | chromosome | CDS | 2183939 | 825 | + | 0.515152 |
| yohN | b2107 | hypothetical protein | chromosome | CDS | 2184982 | 339 | + | 0.498525 |
| yohO | b4542 | hypothetical protein | chromosome | CDS | 2213679 | 108 | + | 0.490741 |
| yojI | b2211 | fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 2304994 | 1644 | - | 0.534063 |
| yojL | b2214 | predicted thiamine biosynthesis lipoprotein | chromosome | CDS | 2308501 | 1056 | - | 0.534091 |
| ypaA | b4543 | chromosome | pseudo | 2355838 | 186 | + | 0.505376 | |
| ypaA | b4543 | chromosome | pseudo | 2355838 | 186 | + | 0.505376 | |
| ypdA | b2380 | predicted sensory kinase in two-component system with YpdB | chromosome | CDS | 2496693 | 1698 | + | 0.514134 |
| ypdB | b2381 | predicted response regulator in two-component system withYpdA | chromosome | CDS | 2498405 | 735 | + | 0.47483 |
| ypdC | b2382 | predicted DNA-binding protein | chromosome | CDS | 2499152 | 858 | + | 0.536131 |
| ypdD | b2383 | fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component | chromosome | CDS | 2500012 | 2496 | - | 0.552083 |
| ypdE | b2384 | predicted peptidase | chromosome | CDS | 2502532 | 1038 | - | 0.582852 |
| ypdF | b2385 | predicted peptidase | chromosome | CDS | 2503569 | 1086 | - | 0.56814 |
| ypdG | b2386 | predicted enzyme IIC component of PTS | chromosome | CDS | 2504669 | 1248 | - | 0.543269 |
| ypdH | b2387 | predicted enzyme IIB component of PTS | chromosome | CDS | 2505938 | 327 | - | 0.513761 |
| ypdI | b2376 | predicted lipoprotein involved in colanic acid biosynthesis | chromosome | CDS | 2492720 | 276 | + | 0.402174 |
| ypdJ | b4545 | chromosome | pseudo | 2474116 | 141 | + | 0.432624 | |
| ypdJ | b4545 | chromosome | pseudo | 2474116 | 141 | + | 0.432624 | |
| ypeA | b2434 | putative acetyltransferase | chromosome | CDS | 2549735 | 426 | - | 0.516432 |
| ypeB | b4546 | hypothetical protein | chromosome | CDS | 2525963 | 219 | - | 0.515982 |
| ypeC | b2390 | hypothetical protein | chromosome | CDS | 2509023 | 327 | + | 0.541284 |
| ypfE | b2462 | predicted carboxysome structural protein with predicted role in ethanol utilization | chromosome | CDS | 2573492 | 336 | - | 0.505952 |
| ypfG | b2466 | hypothetical protein | chromosome | CDS | 2579756 | 1044 | - | 0.545977 |
| ypfH | b2473 | predicted hydrolase | chromosome | CDS | 2591094 | 699 | - | 0.539342 |
| ypfI | b2474 | predicted hydrolase | chromosome | CDS | 2591866 | 2016 | - | 0.552579 |
| ypfJ | b2475 | hypothetical protein | chromosome | CDS | 2593896 | 864 | - | 0.53588 |
| ypfN | b4547 | hypothetical protein | chromosome | CDS | 2590784 | 201 | + | 0.482587 |
| yphA | b2543 | predicted inner membrane protein | chromosome | CDS | 2671296 | 495 | + | 0.490909 |
| yphB | b2544 | hypothetical protein | chromosome | CDS | 2671838 | 873 | - | 0.552119 |
| yphC | b2545 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding | chromosome | CDS | 2672722 | 1062 | - | 0.551789 |
| yphD | b2546 | predicted sugar transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 2673849 | 999 | - | 0.561562 |
| yphE | b2547 | fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 2674872 | 1512 | - | 0.560847 |
| yphF | b2548 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 2676406 | 984 | - | 0.461382 |
| yphG | b2549 | hypothetical protein | chromosome | CDS | 2677486 | 3282 | - | 0.548751 |
| yphH | b2550 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2680885 | 1194 | + | 0.505863 |
| ypjA | b2647 | adhesin-like autotransporter | chromosome | CDS | 2776168 | 4581 | - | 0.492032 |
| ypjB | b2649 | hypothetical protein | chromosome | CDS | 2781660 | 792 | - | 0.35101 |
| ypjC | b2650 | hypothetical protein | chromosome | CDS | 2782551 | 483 | - | 0.327122 |
| ypjD | b2611 | predicted inner membrane protein | chromosome | CDS | 2745909 | 867 | + | 0.521338 |
| ypjF | b2646 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system | chromosome | CDS | 2775475 | 330 | + | 0.475758 |
| ypjJ | b4548 | hypothetical protein | chromosome | CDS | 2774899 | 201 | + | 0.547264 |
| ypjK | b2635 | CP4-57 prophage; predicted inner membrane protein | chromosome | CDS | 2768467 | 237 | + | 0.531646 |
| ypjL | b2639 | CP4-57 prophage; predicted inner membrane protein | chromosome | CDS | 2770189 | 519 | - | 0.537572 |
| ypjM | b2641 | CP4-57 prophage; predicted protein (pseudogene) | chromosome | CDS | 2770998 | 183 | - | 0.568306 |
| yqaA | b2689 | conserved inner membrane protein | chromosome | CDS | 2814534 | 429 | - | 0.494172 |
| yqaB | b2690 | predicted hydrolase | chromosome | CDS | 2814959 | 567 | - | 0.534392 |
| yqaC | b2657 | conserved protein (pseudogene) | chromosome | CDS | 2785664 | 597 | + | 0.370184 |
| yqaD | b2658 | hypothetical protein | chromosome | CDS | 2786399 | 273 | + | 0.369963 |
| yqaE | b2666 | predicted membrane protein | chromosome | CDS | 2794892 | 159 | - | 0.509434 |
| yqcA | b2790 | flavodoxin | chromosome | CDS | 2920557 | 450 | - | 0.526667 |
| yqcB | b2791 | tRNA pseudouridine synthase | chromosome | CDS | 2921024 | 783 | - | 0.54023 |
| yqcC | b2792 | hypothetical protein | chromosome | CDS | 2921806 | 330 | - | 0.524242 |
| yqcD | b2794 | hypothetical protein | chromosome | CDS | 2923370 | 849 | + | 0.48881 |
| yqcE | b2775 | predicted transporter | chromosome | CDS | 2898614 | 1278 | + | 0.49687 |
| yqeA | b2874 | predicted amino acid kinase | chromosome | CDS | 3009483 | 933 | + | 0.49089 |
| yqeB | b2875 | conserved protein with NAD(P)-binding Rossman fold | chromosome | CDS | 3010636 | 1626 | - | 0.52214 |
| yqeC | b2876 | hypothetical protein | chromosome | CDS | 3012309 | 771 | - | 0.50454 |
| yqeF | b2844 | acetyl-CoA acetyltransferase | chromosome | CDS | 2982433 | 1182 | - | 0.535533 |
| yqeG | b2845 | predicted transporter | chromosome | CDS | 2983869 | 1230 | + | 0.444715 |
| yqeH | b2846 | conserved protein with bipartite regulator domain | chromosome | CDS | 2985558 | 633 | + | 0.374408 |
| yqeI | b2847 | predicted transcriptional regulator | chromosome | CDS | 2986524 | 810 | + | 0.396296 |
| yqeJ | b2848 | hypothetical protein | chromosome | CDS | 2987326 | 483 | + | 0.31677 |
| yqeK | b2849 | hypothetical protein | chromosome | CDS | 2987957 | 426 | - | 0.328638 |
| yqfA | b2899 | predicted oxidoreductase, inner membrane subunit | chromosome | CDS | 3040511 | 660 | - | 0.519697 |
| yqfB | b2900 | hypothetical protein | chromosome | CDS | 3041334 | 312 | - | 0.435897 |
| yqfE | b2915 | hypothetical protein | chromosome | CDS | 3057403 | 231 | - | 0.549784 |
| yqgA | b2966 | predicted inner membrane protein | chromosome | CDS | 3107575 | 708 | + | 0.516949 |
| yqgB | b2939 | hypothetical protein | chromosome | CDS | 3083942 | 147 | - | 0.394558 |
| yqgC | b2940 | hypothetical protein | chromosome | CDS | 3084209 | 216 | + | 0.481481 |
| yqgD | b2941 | predicted inner membrane protein | chromosome | CDS | 3084421 | 252 | - | 0.428571 |
| yqgE | b2948 | hypothetical protein | chromosome | CDS | 3090959 | 564 | + | 0.510638 |
| yqgF | b2949 | Holliday junction resolvase-like protein | chromosome | CDS | 3091522 | 417 | + | 0.529976 |
| yqhA | b3002 | hypothetical protein | chromosome | CDS | 3146999 | 495 | - | 0.474747 |
| yqhC | b3010 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3152284 | 957 | - | 0.504702 |
| yqhD | b3011 | alcohol dehydrogenase, NAD(P)-dependent | chromosome | CDS | 3153377 | 1164 | + | 0.546392 |
| yqhG | b3013 | hypothetical protein | chromosome | CDS | 3155672 | 927 | + | 0.473571 |
| yqhH | b3014 | predicted outer membrane lipoprotein | chromosome | CDS | 3156649 | 258 | + | 0.484496 |
| yqiA | b3031 | predicted esterase | chromosome | CDS | 3173447 | 582 | - | 0.537801 |
| yqiB | b3033 | predicted dehydrogenase | chromosome | CDS | 3174880 | 423 | - | 0.482269 |
| yqiC | b3042 | hypothetical protein | chromosome | CDS | 3182862 | 291 | + | 0.494845 |
| yqiG | b3046 | predicted outer membrane usher protein | chromosome | CDS | 3185422 | 2466 | + | 0.422141 |
| yqiH | b3047 | predicted periplasmic pilin chaperone | chromosome | CDS | 3187903 | 750 | + | 0.386667 |
| yqiI | b3048 | hypothetical protein | chromosome | CDS | 3188654 | 1065 | + | 0.399061 |
| yqiJ | b3050 | predicted inner membrane protein | chromosome | CDS | 3190230 | 630 | + | 0.425397 |
| yqiK | b3051 | hypothetical protein | chromosome | CDS | 3190886 | 1662 | + | 0.504212 |
| yqjA | b3095 | conserved inner membrane protein | chromosome | CDS | 3245795 | 663 | + | 0.506787 |
| yqjB | b3096 | hypothetical protein | chromosome | CDS | 3246461 | 384 | + | 0.539062 |
| yqjC | b3097 | hypothetical protein | chromosome | CDS | 3246991 | 369 | + | 0.487805 |
| yqjD | b3098 | hypothetical protein | chromosome | CDS | 3247397 | 306 | + | 0.54902 |
| yqjE | b3099 | conserved inner membrane protein | chromosome | CDS | 3247705 | 405 | + | 0.528395 |
| yqjF | b3101 | predicted quinol oxidase subunit | chromosome | CDS | 3248584 | 393 | + | 0.48855 |
| yqjG | b3102 | predicted S-transferase | chromosome | CDS | 3249046 | 987 | + | 0.511651 |
| yqjH | b3070 | predicted siderophore interacting protein | chromosome | CDS | 3213749 | 765 | - | 0.563399 |
| yqjI | b3071 | predicted transcriptional regulator | chromosome | CDS | 3214801 | 624 | + | 0.536859 |
| yqjK | b3100 | hypothetical protein | chromosome | CDS | 3248099 | 300 | + | 0.566667 |
| yraH | b3142 | predicted fimbrial-like adhesin protein | chromosome | CDS | 3285448 | 585 | + | 0.451282 |
| yraI | b3143 | predicted periplasmic pilin chaperone | chromosome | CDS | 3286112 | 696 | + | 0.442529 |
| yraJ | b3144 | predicted outer membrane protein | chromosome | CDS | 3286836 | 2517 | + | 0.475963 |
| yraK | b3145 | predicted fimbrial-like adhesin protein | chromosome | CDS | 3289363 | 1092 | + | 0.478938 |
| yraL | b3146 | predicted methyltransferase | chromosome | CDS | 3290497 | 861 | - | 0.545877 |
| yraM | b3147 | hypothetical protein | chromosome | CDS | 3291422 | 2037 | + | 0.540501 |
| yraN | b3148 | hypothetical protein | chromosome | CDS | 3293416 | 396 | + | 0.545455 |
| yraO | b3149 | DnaA initiator-associating factor for replication initiation | chromosome | CDS | 3293831 | 591 | + | 0.502538 |
| yraP | b3150 | hypothetical protein | chromosome | CDS | 3294431 | 576 | + | 0.543403 |
| yraQ | b3151 | predicted permease | chromosome | CDS | 3295120 | 1041 | - | 0.57733 |
| yraR | b3152 | predicted nucleoside-diphosphate-sugar epimerase | chromosome | CDS | 3296233 | 636 | - | 0.548742 |
| yrbA | b3190 | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3334571 | 255 | - | 0.505882 |
| yrbB | b3191 | hypothetical protein | chromosome | CDS | 3334985 | 294 | - | 0.534014 |
| yrbC | b3192 | predicted ABC-type organic solvent transporter | chromosome | CDS | 3335278 | 636 | - | 0.523585 |
| yrbD | b3193 | predicted ABC-type organic solvent transporter | chromosome | CDS | 3335932 | 552 | - | 0.498188 |
| yrbE | b3194 | predicted toluene transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 3336488 | 783 | - | 0.551724 |
| yrbF | b3195 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 3337278 | 810 | - | 0.545679 |
| yrbG | b3196 | predicted calcium/sodium:proton antiporter | chromosome | CDS | 3338297 | 978 | + | 0.52045 |
| yrbK | b3199 | hypothetical protein | chromosome | CDS | 3340858 | 576 | + | 0.463542 |
| yrbL | b3207 | hypothetical protein | chromosome | CDS | 3346474 | 633 | + | 0.511848 |
| yrdA | b3279 | hypothetical protein | chromosome | CDS | 3427258 | 555 | + | 0.488288 |
| yrdB | b3280 | hypothetical protein | chromosome | CDS | 3427788 | 258 | - | 0.492248 |
| yrdC | b3282 | predicted ribosome maturation factor | chromosome | CDS | 3428865 | 573 | - | 0.521815 |
| yrdD | b3283 | predicted DNA topoisomerase | chromosome | CDS | 3429442 | 543 | - | 0.497238 |
| yrfA | b3392 | hypothetical protein | chromosome | CDS | 3518637 | 405 | - | 0.523457 |
| yrfB | b3393 | hypothetical protein | chromosome | CDS | 3519031 | 441 | - | 0.546485 |
| yrfC | b3394 | predicted fimbrial assembly protein | chromosome | CDS | 3519455 | 540 | - | 0.553704 |
| yrfD | b3395 | predicted pilus assembly protein | chromosome | CDS | 3519994 | 780 | - | 0.576923 |
| yrfF | b3398 | predicted inner membrane protein | chromosome | CDS | 3524491 | 2136 | + | 0.527622 |
| yrfG | b3399 | predicted hydrolase | chromosome | CDS | 3526691 | 669 | + | 0.515695 |
| yrhA | b3443 | hypothetical protein | chromosome | CDS | 3581064 | 414 | + | 0.297101 |
| yrhB | b3446 | hypothetical protein | chromosome | CDS | 3582782 | 285 | + | 0.45614 |
| yrhC | b4552 | chromosome | pseudo | 3621910 | 246 | + | 0.341463 | |
| yrhC | b4552 | chromosome | pseudo | 3621910 | 246 | + | 0.341463 | |
| ysaB | b4553 | hypothetical protein | chromosome | CDS | 3723436 | 300 | - | 0.476667 |
| ysdC | b4556 | chromosome | pseudo | 3859196 | 177 | - | 0.542373 | |
| ysdC | b4556 | chromosome | pseudo | 3859196 | 177 | - | 0.542373 | |
| ysgA | b3830 | predicted hydrolase | chromosome | CDS | 4013377 | 816 | - | 0.545343 |
| ytfA | b4205 | predicted transcriptional regulator | chromosome | CDS | 4425792 | 327 | + | 0.422018 |
| ytfB | b4206 | predicted cell envelope opacity-associated protein | chromosome | CDS | 4426102 | 639 | - | 0.557121 |
| ytfE | b4209 | predicted regulator of cell morphogenesis and cell wall metabolism | chromosome | CDS | 4429344 | 663 | - | 0.53092 |
| ytfF | b4210 | predicted inner membrane protein | chromosome | CDS | 4430114 | 975 | - | 0.554872 |
| ytfG | b4211 | NAD(P)H:quinone oxidoreductase | chromosome | CDS | 4431187 | 861 | - | 0.542393 |
| ytfH | b4212 | predicted transcriptional regulator | chromosome | CDS | 4432136 | 381 | + | 0.56168 |
| ytfI | b4215 | hypothetical protein | chromosome | CDS | 4435730 | 939 | + | 0.361022 |
| ytfJ | b4216 | predicted transcriptional regulator | chromosome | CDS | 4436731 | 555 | - | 0.524324 |
| ytfK | b4217 | hypothetical protein | chromosome | CDS | 4437610 | 207 | + | 0.434783 |
| ytfL | b4218 | predicted inner membrane protein | chromosome | CDS | 4437895 | 1344 | - | 0.50744 |
| ytfM | b4220 | predicted outer membrane protein and surface antigen | chromosome | CDS | 4440405 | 1734 | + | 0.533449 |
| ytfN | b4221 | hypothetical protein | chromosome | CDS | 4442135 | 3780 | + | 0.55 |
| ytfP | b4222 | hypothetical protein | chromosome | CDS | 4445917 | 342 | + | 0.51462 |
| ytfQ | b4227 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily | chromosome | CDS | 4447985 | 957 | + | 0.498433 |
| ytfR | b4485 | predicted sugar transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 4449081 | 1503 | + | 0.555556 |
| ytfT | b4230 | predicted sugar transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 4450597 | 1023 | + | 0.575758 |
| ytjA | b4568 | hypothetical protein | chromosome | CDS | 4610133 | 180 | + | 0.511111 |
| ytjB | b4387 | hypothetical protein | chromosome | CDS | 4622168 | 645 | - | 0.556589 |
| ytjC | b4395 | phosphoglycerate mutase | chromosome | CDS | 4631820 | 648 | + | 0.561728 |
| yzcX | b3808 | hypothetical protein | chromosome | CDS | 3991873 | 486 | + | 0.497942 |
| yzfA | b4223 | hypothetical protein | chromosome | CDS | 4445999 | 270 | - | 0.522222 |
| yzgL | b3427 | hypothetical protein | chromosome | CDS | 3561747 | 282 | - | 0.460993 |
| zapA | b2910 | protein that localizes to the cytokinetic ring | chromosome | CDS | 3053634 | 330 | + | 0.466667 |
| zipA | b2412 | cell division protein ZipA | chromosome | CDS | 2528269 | 987 | - | 0.551165 |
| zitB | b0752 | zinc transporter ZitB | chromosome | CDS | 783105 | 942 | - | 0.530786 |
| zntA | b3469 | zinc, cobalt and lead efflux system | chromosome | CDS | 3604474 | 2199 | + | 0.582538 |
| zntR | b3292 | zinc-responsive transcriptional regulator | chromosome | CDS | 3436727 | 426 | - | 0.488263 |
| znuA | b1857 | high-affinity zinc transporter periplasmic component | chromosome | CDS | 1939675 | 933 | - | 0.49089 |
| znuB | b1859 | high-affinity zinc transporter membrane component | chromosome | CDS | 1941438 | 786 | + | 0.519084 |
| znuC | b1858 | high-affinity zinc transporter ATPase | chromosome | CDS | 1940686 | 756 | + | 0.492063 |
| zraP | b4002 | Zn-binding periplasmic protein | chromosome | CDS | 4199286 | 426 | - | 0.535211 |
| zraR | b4004 | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | chromosome | CDS | 4201343 | 1326 | + | 0.562594 |
| zraS | b4003 | sensory histidine kinase in two-component regulatory system with ZraR | chromosome | CDS | 4199949 | 1398 | + | 0.542918 |
| zupT | b3039 | predicted dioxygenase | chromosome | CDS | 3179641 | 816 | - | 0.535539 |
| zur | b4046 | DNA-binding transcriptional repressor, Zn(II)-binding | chromosome | CDS | 4257511 | 516 | - | 0.521318 |
| zwf | b1852 | glucose-6-phosphate 1-dehydrogenase | chromosome | CDS | 1932863 | 1476 | - | 0.516938 |