TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-16 21:17:29

Gene list

Applied filters:

Genomic element: pCD

Number of genes found: 94

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA YPA_CD0017 pCD sig_peptide14764 87 - 0.505747
NA YPA_CD0006 pCD sig_peptide5203 66 - 0.30303
NA YPA_CD0039 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS31936 192 + 0.458333
NA YPA_CD0010 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS6466 264 - 0.416667
NA YPA_CD0072 targeted effector proteinSubName: Full=YopJ peptidase. Cysteine peptidase. MEROPS family C55; pCD CDS65018 867 + 0.344867
NA YPA_CD0032 Yop targeting proteinSubName: Full=Yop targeting protein; pCD CDS26317 1206 + 0.466833
NA YPA_CD0012 pCD sig_peptide9926 81 - 0.45679
NA YPA_CD0048 plasmid partitioning transcription repressorSubName: Full=Plasmid partitioning transcription repressor; pCD CDS39390 1209 + 0.434243
NA YPA_CD0023 membrane-bound Yop targeting proteinSubName: Full=Type III secretion outer membrane protein PopN; pCD CDS19767 882 + 0.461451
NA YPA_CD0046 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS37868 459 + 0.551198
NA YPA_CD0065 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS56829 318 + 0.493711
NA YPA_CD0001 transposaseSubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pCD CDS88 1023 + 0.527859
NA YPA_CD0040 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS33092 123 - 0.406504
NA YPA_CD0051 pCD sig_peptide44084 72 - 0.430556
NA YPA_CD0011 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS6927 1260 - 0.46746
NA YPA_CD0036 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS29587 210 + 0.428571
NA YPA_CD0051 outer membrane virulence proteinSubName: Full=Outer membrane virulence protein; Flags: Precursor; pCD CDS43496 660 - 0.510606
NA YPA_CD0069 replication initiation proteinSubName: Full=Replication initiation protein; pCD CDS58943 867 + 0.542099
NA YPA_CD0014 thermoregulatory proteinSubName: Full=Thermoregulatory protein; pCD CDS10828 816 - 0.416667
NA YPA_CD0028 membrane-bound Yop proteinSubName: Full=Membrane-bound Yop protein; pCD CDS21958 2115 + 0.463357
NA YPA_CD0071 targeted effector protein kinaseSubName: Full=Targeted effector protein kinase; pCD CDS62424 2199 + 0.481583
NA YPA_CD0004 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS3294 633 - 0.450237
NA YPA_CD0015 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS12738 1065 - 0.431925
NA YPA_CD0079 Yop regulatorSubName: Full=Yop regulator; pCD CDS24551 288 + 0.46875
NA YPA_CD0059 resolvaseSubName: Full=Resolvase; pCD CDS50219 552 - 0.46558
NA YPA_CD0009 type III secretion proteinSubName: Full=Type III secretion protein; Flags: Precursor; pCD CDS6117 348 - 0.439655
NA YPA_CD0008 type III secretion proteinSubName: Full=Type III secretion protein; Flags: Precursor; pCD CDS5623 498 - 0.429719
NA YPA_CD0012 type III secretion proteinSubName: Full=Type III secretion protein; Flags: Precursor; pCD CDS8183 1824 - 0.454496
NA YPA_CD0041 yopT chaperoneSubName: Full=YopT chaperone; pCD CDS33779 399 - 0.411028
NA YPA_CD0033 Yop negative regulation/targeting componentSubName: Full=Yop negative regulation/targeting component; pCD CDS27541 921 + 0.431053
NA YPA_CD0060 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS53246 381 - 0.509186
NA YPA_CD0006 type III secretion lipoproteinSubName: Full=Type III secretion lipoprotein; Flags: Precursor; pCD CDS4534 735 - 0.428571
NA YPA_CD0003 type III secretion regulatory proteinSubName: Full=Type III secretion regulatory protein; pCD CDS2722 348 - 0.479885
NA YPA_CD0002 ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Transposase; pCD CDS1110 780 + 0.503846
NA YPA_CD0073 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS66470 648 - 0.503086
NA YPA_CD0053 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS44804 615 - 0.547967
NA YPA_CD0084 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS42105 174 - 0.471264
NA YPA_CD0050 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS42822 243 + 0.440329
NA YPA_CD0056 yopH targeting proteinSubName: Full=YopH targeting protein; pCD CDS47496 426 + 0.41784
NA YPA_CD0074 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS67078 207 + 0.608696
NA YPA_CD0027 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS21627 345 + 0.46087
NA YPA_CD0077 transposaseSubName: Full=Transposase; pCD CDS69485 309 - 0.459547
NA YPA_CD0031 yopB/yopD chaperoneSubName: Full=YopB/yopD chaperone; pCD CDS25833 507 + 0.441815
NA YPA_CD0076 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS69194 180 - 0.466667
NA YPA_CD0080 transposase ORFASubName: Full=Transposase ORFA; pCD CDS1899 276 - 0.460145
NA YPA_CD0078 transposaseSubName: Full=Transposase; pCD CDS69790 381 - 0.435696
NA YPA_CD0063 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS55861 189 - 0.492063
NA YPA_CD0021 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS17789 465 - 0.458065
NA YPA_CD0085 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS43057 300 + 0.38
NA YPA_CD0081 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS6730 201 - 0.422886
NA YPA_CD0066 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS57170 408 + 0.539216
NA YPA_CD0061 transposaseSubName: Full=Transposase; pCD CDS50934 2316 + 0.51943
NA YPA_CD0022 Yop secretion ATP synthaseSubName: Full=Type III secretion system ATPase, FliI/YscN; EC=3.6.3.15; pCD CDS18250 1320 - 0.508333
NA YPA_CD0062 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS54615 921 + 0.421281
NA YPA_CD0005 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS3905 630 - 0.485714
NA YPA_CD0035 transposaseSubName: Full=Transposase; pCD CDS29095 324 - 0.388889
NA YPA_CD0019 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS15502 924 - 0.481602
NA YPA_CD0043 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS36337 240 + 0.491667
NA YPA_CD0013 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS10012 414 - 0.417874
NA YPA_CD0087 transposase remnantSubName: Full=Transposase remnant; pCD CDS57839 96 + 0.479167
NA YPA_CD0067 Phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; pCD CDS57994 249 + 0.493976
NA YPA_CD0058 transposaseSubName: Full=Helix-turn-helix, Fis-type; SubName: Full=Transposase; pCD CDS48902 267 - 0.479401
NA YPA_CD0008 pCD sig_peptide6061 60 - 0.45
NA YPA_CD0042 cytotoxic effector proteinSubName: Full=YopT peptidase. Cysteine peptidase. MEROPS family C58; pCD CDS34177 969 - 0.431373
NA YPA_CD0020 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS16422 1368 - 0.486842
NA YPA_CD0082 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS29444 123 - 0.463415
NA YPA_CD0070 transposase remnantSubName: Full=Transposase remnant; pCD CDS61393 279 + 0.508961
NA YPA_CD0054 transposaseSubName: Full=Transposase; pCD CDS45551 1173 + 0.546462
NA YPA_CD0016 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS13802 786 - 0.428753
NA YPA_CD0064 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS56199 459 + 0.555556
NA YPA_CD0057 transposaseSubName: Full=Transposase; pCD CDS48069 756 - 0.497355
NA YPA_CD0018 Yop secretion membrane proteinSubName: Full=Yop secretion membrane protein; pCD CDS14852 654 - 0.43578
NA YPA_CD0047 transposase remnantSubName: Full=Transposase remnant; pCD CDS38438 195 + 0.497436
NA YPA_CD0089 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS66165 93 + 0.387097
NA YPA_CD0024 Yop secretion and targeting proteinSubName: Full=Yop secretion and targeting protein; pCD CDS20629 279 + 0.433692
NA YPA_CD0088 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS61967 450 + 0.451111
NA YPA_CD0044 conjugative transfer surface exclusion proteinSubName: Full=Conjugative transfer surface exclusion protein; pCD CDS36803 618 + 0.487055
NA YPA_CD0068 replication transcriptional regulatorSubName: Full=Replication transcriptional regulator; pCD CDS58380 255 + 0.423529
NA YPA_CD0026 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS21262 369 + 0.495935
NA YPA_CD0038 protein 25SubName: Full=Protein 25; pCD CDS31462 300 - 0.436667
NA YPA_CD0034 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS28929 132 - 0.462121
NA YPA_CD0017 type III secretion proteinSubName: Full=Type III secretion protein; Flags: Precursor; pCD CDS14584 267 - 0.453184
NA YPA_CD0037 targeted effector proteinSubName: Full=Targeted effector protein; pCD CDS30367 1053 + 0.391263
NA YPA_CD0030 V antigen, antihost protein/regulatorSubName: Full=V antigen, antihost protein/regulator; pCD CDS24840 981 + 0.377166
NA YPA_CD0045 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS37527 318 + 0.487421
NA YPA_CD0052 yopE chaperoneSubName: Full=YopE chaperone; pCD CDS44349 393 + 0.409669
NA YPA_CD0049 plasmid partitioning control proteinSubName: Full=Plasmid partitioning control protein; pCD CDS40595 966 + 0.417184
NA YPA_CD0055 transposaseSubName: Full=Transposase; pCD CDS46723 357 + 0.591036
NA YPA_CD0025 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS20894 372 + 0.526882
NA YPA_CD0029 low calcium response locus protein RSubName: Full=Low calcium response locus protein R; pCD CDS24069 441 + 0.489796
NA YPA_CD0083 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS38770 114 - 0.561404
NA YPA_CD0075 protein-tyrosine phosphatase Yop effectorSubName: Full=Protein-tyrosine phosphatase Yop effector; pCD CDS67567 1407 + 0.474058
NA YPA_CD0007 type III secretion proteinSubName: Full=Type III secretion protein; pCD CDS5275 348 - 0.468391
NA YPA_CD0086 hypothetical proteinSubName: Full=Uncharacterized protein; pCD CDS55658 207 + 0.449275