TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-25 09:12:49

Gene list

Applied filters:

Gene type: CDS
Genomic element: pYVe8081

Number of genes found: 72

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YEP0092 transposase for insertion sequence element IS4pYVe8081 CDS63019 1338 - 0.560538
NA YEP0090 transposase for insertion sequence element IS1665pYVe8081 CDS62177 786 - 0.559796
NA YEP0003 putative transposasepYVe8081 CDS1674 435 + 0.51954
NA YEP0073 putative resolvase/recombinasepYVe8081 CDS52049 735 - 0.553742
NA YEP0062 putative plasmid partitioning transcription repressorpYVe8081 CDS43893 1167 - 0.44473
NA YEP0001 putative transposasepYVe8081 CDS628 660 + 0.477273
NA YEP0066 putative YadA invasinpYVe8081 CDS47054 1269 - 0.42238
NA YEP0007 hypothetical proteinpYVe8081 CDS6065 138 - 0.434783
NA YEP0011 hypothetical proteinpYVe8081 CDS8950 219 + 0.410959
NA YEP0049 hypothetical proteinpYVe8081 CDS35593 168 + 0.39881
NA YEP0057 hypothetical proteinpYVe8081 CDS41132 303 - 0.386139
NA YEP0051 putative yopH targeting proteinpYVe8081 CDS37677 432 - 0.416667
NA YEP0074 hypothetical proteinpYVe8081 CDS52920 198 - 0.550505
NA YEP0071 hypothetical proteinpYVe8081 CDS50937 309 - 0.443366
NA YEP0095 putative plasmid copy number control proteinpYVe8081 CDS65993 246 + 0.418699
NA YEP0080 hypothetical proteinpYVe8081 CDS55297 432 + 0.444444
NA YEP0089 hypothetical proteinpYVe8081 CDS61617 552 - 0.429348
NA YEP0096 putative leader peptide RepBpYVe8081 CDS66500 57 + 0.508772
NA YEP0061 putative plasmid partitioning control proteinpYVe8081 CDS42931 963 - 0.417445
NA YEP0063 hypothetical proteinpYVe8081 CDS45373 216 - 0.541667
NA YEP0058 hypothetical proteinpYVe8081 CDS41427 243 - 0.44856
NA YEP0053 putative outer membrane virulence proteinpYVe8081 CDS39047 660 + 0.510606
NA YEP0050 putative protein-tyrosine phosphatase Yop effectorpYVe8081 CDS36049 1407 + 0.468372
NA YEP0069 transposasepYVe8081 CDS49605 1203 + 0.481297
NA YEP0072 hypothetical proteinpYVe8081 CDS51245 630 - 0.463492
NA YEP0052 putative YopE chaperonepYVe8081 CDS38462 393 - 0.409669
lcrD YEP0018 low calcium response locus membrane protein dpYVe8081 CDS14027 2115 - 0.460993
lcrG YEP0016 low calcium response locus protein gpYVe8081 CDS13261 288 - 0.465278
lcrR YEP0017 low calcium response locus protein RpYVe8081 CDS13590 441 - 0.489796
lcrV YEP0015 virulence-associated V antigenpYVe8081 CDS12285 975 - 0.368205
repA YEP0097 replication initiation proteinpYVe8081 CDS66549 1023 + 0.442815
sycD YEP0014 yopB/D chaperone/regulatory proteinpYVe8081 CDS11776 507 - 0.443787
sycN YEP0021 YopN chaperone SycNpYVe8081 CDS16834 372 - 0.518817
sycT YEP0006 chaperone of YopTpYVe8081 CDS4320 393 + 0.414758
tnp YEP0094 transposase for IS1541pYVe8081 CDS65333 459 + 0.461874
trp1400A YEP0002 IS1400 transposase ApYVe8081 CDS1284 288 - 0.46875
tyeA YEP0022 type III secretion system proteinpYVe8081 CDS17192 279 - 0.433692
virF YEP0035 virulence regulon transcriptional activatorpYVe8081 CDS26450 816 + 0.410539
virG YEP0033 putative type III secretion effector targeting lipoproteinpYVe8081 CDS25931 396 + 0.444444
yomA YEP0065 hypothetical proteinpYVe8081 CDS46109 876 - 0.336758
yopB YEP0013 virulence plasmid YopB transmembrane effector proteinpYVe8081 CDS10593 1206 - 0.461857
yopD YEP0012 translocator proteinpYVe8081 CDS9654 921 - 0.432139
yopJ YEP0083 putative targeted effector proteinpYVe8081 CDS58302 867 + 0.349481
yopM YEP0010 yop type III secretion system effector proteinpYVe8081 CDS7724 1104 - 0.400362
yopN YEP0023 type III secretion outer membrane proteinpYVe8081 CDS17451 882 - 0.461451
yopO YEP0081 putative targeted effector protein kinasepYVe8081 CDS55746 2190 + 0.483105
yopQ YEP0004 virulence plasmid proteinpYVe8081 CDS2291 549 - 0.333333
yopT YEP0005 plasmid type III secretion system effector proteinpYVe8081 CDS3352 969 + 0.432405
yscA YEP0036 conserved hypothetical hydrophobic proteinpYVe8081 CDS27345 99 + 0.323232
yscB YEP0037 hypothetical proteinpYVe8081 CDS27668 414 + 0.42029
yscC YEP0038 putative type III secretion proteinpYVe8081 CDS28087 1824 + 0.45614
yscD YEP0039 putative type III secretion proteinpYVe8081 CDS29907 1257 + 0.466985
yscE YEP0040 putative type III secretion proteinpYVe8081 CDS31160 204 + 0.426471
yscF YEP0041 putative type III secretion proteinpYVe8081 CDS31360 264 + 0.435606
yscG YEP0042 putative type III secretion proteinpYVe8081 CDS31625 348 + 0.442529
yscH YEP0043 putative type III secretion proteinpYVe8081 CDS31969 498 + 0.433735
yscI YEP0044 putative type III secretion proteinpYVe8081 CDS32467 348 + 0.474138
yscJ YEP0045 type III secretion lipoproteinpYVe8081 CDS32821 735 + 0.434014
yscK YEP0046 type III secretion proteinpYVe8081 CDS33555 630 + 0.487302
yscL YEP0047 putative type III secretion proteinpYVe8081 CDS34130 672 + 0.44494
yscM YEP0048 putative type III secretion regulatory proteinpYVe8081 CDS35020 348 + 0.485632
yscM2 YEP0086 regulatory proteinpYVe8081 CDS59787 351 + 0.37037
yscN YEP0024 probable type III secretion system ATP synthasepYVe8081 CDS18530 1320 + 0.506818
yscO YEP0025 type III secretion system translocation proteinpYVe8081 CDS19846 465 + 0.464516
yscP YEP0026 putative type III secretion proteinpYVe8081 CDS20310 1362 + 0.487518
yscQ YEP0027 putative type III secretion proteinpYVe8081 CDS21668 924 + 0.483766
yscR YEP0028 putative type III secretion proteinpYVe8081 CDS22588 654 + 0.428135
yscS YEP0029 putative type III secretion proteinpYVe8081 CDS23243 267 + 0.453184
yscT YEP0030 putative type III secretion proteinpYVe8081 CDS23506 786 + 0.428753
yscU YEP0031 putative type III secretion proteinpYVe8081 CDS24291 1065 + 0.437559
yscX YEP0020 hypothetical proteinpYVe8081 CDS16469 369 - 0.498645
yscY YEP0019 hypothetical proteinpYVe8081 CDS16128 345 - 0.452174