Gene list
Applied filters:
Gene type: CDS
Genomic element: pCP301
Number of genes found: 261
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 301, 301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | CP0113 | ISSfl4 ORF2 | pCP301 | CDS | 93705 | 351 | - | 0.549858 |
NA | CP0002 | putative resolvase | pCP301 | CDS | 485 | 465 | + | 0.507527 |
NA | CP0218 | hypothetical protein | pCP301 | CDS | 177797 | 276 | + | 0.5 |
NA | CP0174 | putative transposase | pCP301 | CDS | 144329 | 231 | - | 0.463203 |
NA | CP0212 | ISSfl4 ORF2 | pCP301 | CDS | 174109 | 348 | + | 0.571839 |
NA | CP0069 | IS21 ORF2 | pCP301 | CDS | 51950 | 627 | + | 0.532695 |
NA | CP0121 | IS100 ORF1 | pCP301 | CDS | 101709 | 1005 | - | 0.526368 |
NA | CP0177 | putative reverse transcriptase | pCP301 | CDS | 146245 | 240 | - | 0.520833 |
NA | CP0172 | IS629 ORF2 | pCP301 | CDS | 143657 | 408 | + | 0.566176 |
NA | CP0249 | oriT nicking and unwinding protein | pCP301 | CDS | 200577 | 3501 | + | 0.603542 |
NA | CP0214 | IS100 ORF2 | pCP301 | CDS | 176266 | 234 | + | 0.495726 |
NA | CP0060 | hypothetical protein | pCP301 | CDS | 45256 | 303 | - | 0.448845 |
NA | CP0239 | IS630 ORF | pCP301 | CDS | 195760 | 957 | - | 0.535005 |
NA | CP0074 | ISSfl1 ORF2 | pCP301 | CDS | 59270 | 390 | + | 0.517949 |
NA | CP0211 | ISSfl4 ORF1 | pCP301 | CDS | 173438 | 675 | + | 0.503704 |
NA | CP0058 | IS600 ORF1 | pCP301 | CDS | 44413 | 303 | - | 0.458746 |
NA | CP0262 | IS1294 transposase | pCP301 | CDS | 211427 | 1197 | - | 0.578947 |
NA | CP0012 | hypothetical protein | pCP301 | CDS | 10620 | 378 | - | 0.537037 |
NA | CP0189 | IS600 ORF2 | pCP301 | CDS | 158491 | 201 | - | 0.522388 |
NA | CP0023 | hypothetical protein | pCP301 | CDS | 20087 | 315 | + | 0.495238 |
NA | CP0159 | IS600 ORF2 | pCP301 | CDS | 137406 | 189 | + | 0.460317 |
NA | CP0019 | ISSfl4 ORF2 | pCP301 | CDS | 15661 | 348 | + | 0.563218 |
NA | CP0173 | IS629 ORF2 | pCP301 | CDS | 144033 | 294 | + | 0.513605 |
NA | CP0091 | iso-IS10R ORF | pCP301 | CDS | 75050 | 1209 | - | 0.450786 |
NA | CP0057 | IS600 ORF2 | pCP301 | CDS | 44189 | 189 | - | 0.529101 |
NA | CP0071 | IS1294 transposase | pCP301 | CDS | 57241 | 189 | + | 0.566138 |
NA | CP0255 | IS600 ORF1 | pCP301 | CDS | 207182 | 303 | - | 0.465347 |
NA | CP0015 | IS91 ORF | pCP301 | CDS | 12871 | 357 | - | 0.521008 |
NA | CP0016 | putative IS91 ORF2 | pCP301 | CDS | 13227 | 186 | - | 0.532258 |
NA | CP0092 | IS1294 transposase | pCP301 | CDS | 76328 | 930 | - | 0.565591 |
NA | CP0101 | ISSfl2 ORF | pCP301 | CDS | 84369 | 1197 | + | 0.577277 |
NA | CP0066 | IS629 ORF1 | pCP301 | CDS | 50267 | 327 | + | 0.53211 |
NA | CP0056 | IS629 ORF2 | pCP301 | CDS | 43481 | 669 | + | 0.54858 |
NA | CP0215 | hypothetical protein | pCP301 | CDS | 176551 | 291 | - | 0.419244 |
NA | CP0184 | IS629 ORF2 | pCP301 | CDS | 154128 | 669 | + | 0.542601 |
NA | CP0187 | hypothetical protein | pCP301 | CDS | 157296 | 327 | - | 0.464832 |
NA | CP0223 | ISSfl4 ORF3 | pCP301 | CDS | 179624 | 381 | + | 0.577428 |
NA | CP0201 | hypothetical protein | pCP301 | CDS | 165663 | 216 | + | 0.574074 |
NA | CP0157 | IS600 ORF2 | pCP301 | CDS | 136257 | 726 | - | 0.522039 |
NA | CP0008 | IS600 ORF2 | pCP301 | CDS | 6107 | 819 | - | 0.510379 |
NA | CP0007 | IS600 ORF2 | pCP301 | CDS | 5745 | 351 | - | 0.541311 |
NA | CP0059 | hypothetical protein | pCP301 | CDS | 44783 | 483 | - | 0.457557 |
NA | CP0116 | IS600 ORF1 | pCP301 | CDS | 97087 | 303 | + | 0.462046 |
NA | CP0043 | IS1294 transposase | pCP301 | CDS | 33960 | 1200 | + | 0.576667 |
NA | CP0209 | hypothetical protein | pCP301 | CDS | 171972 | 639 | - | 0.367762 |
NA | CP0171 | IS629 ORF1 | pCP301 | CDS | 143116 | 327 | + | 0.535168 |
NA | CP0090 | IS1294 transposase | pCP301 | CDS | 74709 | 363 | + | 0.556474 |
NA | CP0210 | iso-IS1 ORF1 | pCP301 | CDS | 172967 | 273 | - | 0.512821 |
NA | CP0027 | IS100 ORF1 | pCP301 | CDS | 25018 | 432 | + | 0.525463 |
NA | CP0264 | putative transposase | pCP301 | CDS | 212967 | 168 | + | 0.482143 |
NA | CP0192 | ISSfl1 ORF1 | pCP301 | CDS | 160401 | 450 | - | 0.528889 |
NA | CP0106 | insertion sequence 2 OrfA protein | pCP301 | CDS | 87873 | 411 | - | 0.506083 |
NA | CP0270 | IS3 ORF2 | pCP301 | CDS | 218767 | 153 | + | 0.490196 |
NA | CP0109 | hypothetical protein | pCP301 | CDS | 90030 | 486 | - | 0.436214 |
NA | CP0222 | putative protein encoded within IS | pCP301 | CDS | 179387 | 219 | + | 0.557078 |
NA | CP0014 | hypothetical protein | pCP301 | CDS | 11327 | 579 | - | 0.312608 |
NA | CP0072 | IS1294 transposase | pCP301 | CDS | 57439 | 1200 | + | 0.576667 |
NA | CP0176 | putative IS91 ORF2 | pCP301 | CDS | 145160 | 423 | - | 0.470449 |
NA | CP0269 | IS911 ORF2 | pCP301 | CDS | 217155 | 840 | + | 0.546429 |
NA | CP0233 | IS3 ORF2 | pCP301 | CDS | 188108 | 219 | + | 0.579909 |
NA | CP0208 | insertion sequence 2 OrfA protein | pCP301 | CDS | 171135 | 411 | - | 0.510949 |
NA | CP0105 | insertion sequence 2 OrfB protein | pCP301 | CDS | 87010 | 906 | - | 0.554084 |
NA | CP0204 | ISSfl4 ORF3 | pCP301 | CDS | 167760 | 1602 | - | 0.524969 |
NA | CP0095 | ISSfl4 ORF3 | pCP301 | CDS | 81806 | 300 | - | 0.53 |
NA | CP0169 | hypothetical protein | pCP301 | CDS | 142682 | 429 | + | 0.519814 |
NA | CP0254 | IS600 ORF2 | pCP301 | CDS | 206328 | 819 | - | 0.5116 |
NA | CP0213 | ISSfl4 ORF3 | pCP301 | CDS | 174476 | 1602 | + | 0.52372 |
NA | CP0188 | putative reverse transcriptase | pCP301 | CDS | 157675 | 804 | - | 0.549751 |
NA | CP0178 | IS3 ORF2 | pCP301 | CDS | 146631 | 243 | - | 0.559671 |
NA | CP0206 | ISSfl4 ORF1 | pCP301 | CDS | 169705 | 675 | - | 0.502222 |
NA | CP0117 | IS600 ORF2 | pCP301 | CDS | 97417 | 735 | + | 0.517007 |
NA | CP0017 | IS4 ORF | pCP301 | CDS | 13870 | 1344 | - | 0.542411 |
NA | CP0261 | hypothetical protein | pCP301 | CDS | 211006 | 192 | + | 0.53125 |
NA | CP0112 | ISSfl4 ORF3 | pCP301 | CDS | 92107 | 1602 | - | 0.524345 |
NA | CP0118 | IS150 ORF B | pCP301 | CDS | 98573 | 423 | + | 0.503546 |
NA | CP0207 | IS2 ORF2 | pCP301 | CDS | 170327 | 738 | - | 0.544715 |
NA | CP0013 | putative IS1 ORF | pCP301 | CDS | 11015 | 204 | + | 0.45098 |
NA | CP0234 | hypothetical protein | pCP301 | CDS | 188314 | 2913 | - | 0.508411 |
NA | CP0042 | IS1294 transposase | pCP301 | CDS | 33762 | 189 | + | 0.566138 |
NA | CP0216 | hypothetical protein | pCP301 | CDS | 176810 | 252 | - | 0.440476 |
NA | CP0088 | IS629 ORF1 | pCP301 | CDS | 73096 | 327 | - | 0.544343 |
NA | CP0200 | hypothetical protein | pCP301 | CDS | 165429 | 201 | + | 0.567164 |
NA | CP0217 | hypothetical protein | pCP301 | CDS | 177513 | 285 | + | 0.54386 |
NA | CP0114 | ISSfl4 ORF1 | pCP301 | CDS | 94052 | 675 | - | 0.502222 |
NA | CP0044 | IS150 ORF1(ORF A) | pCP301 | CDS | 35565 | 522 | - | 0.45977 |
NA | CP0047 | IS2 ORF2 | pCP301 | CDS | 37780 | 288 | + | 0.5 |
NA | CP0021 | putative transposase | pCP301 | CDS | 18104 | 207 | + | 0.444444 |
NA | CP0083 | hypothetical protein | pCP301 | CDS | 69660 | 291 | + | 0.42268 |
NA | CP0102 | hypothetical protein | pCP301 | CDS | 85560 | 420 | - | 0.314286 |
NA | CP0193 | hypothetical protein | pCP301 | CDS | 160896 | 381 | - | 0.417323 |
NA | CP0029 | transposase/IS protein | pCP301 | CDS | 25446 | 783 | + | 0.501916 |
NA | CP0011 | hypothetical protein | pCP301 | CDS | 10420 | 375 | - | 0.525333 |
NA | CP0061 | IS1294 transposase | pCP301 | CDS | 46083 | 1209 | + | 0.575682 |
NA | CP0268 | IS911 ORF1 | pCP301 | CDS | 216790 | 339 | + | 0.454277 |
NA | CP0001 | IS2 ORF2 | pCP301 | CDS | 191 | 303 | - | 0.49505 |
NA | CP0161 | IS1294 transposase | pCP301 | CDS | 137785 | 189 | + | 0.566138 |
NA | CP0087 | IS629 ORF2 | pCP301 | CDS | 72090 | 792 | - | 0.556818 |
NA | CP0038 | hypothetical protein | pCP301 | CDS | 31392 | 420 | + | 0.530952 |
NA | CP0055 | IS629 ORF1 | pCP301 | CDS | 42940 | 327 | + | 0.544343 |
NA | CP0084 | iso-IS10R ORF | pCP301 | CDS | 70195 | 1209 | + | 0.451613 |
NA | CP0166 | IS3 ORF1 | pCP301 | CDS | 139651 | 216 | - | 0.50463 |
NA | CP0108 | IS600 ORF1 | pCP301 | CDS | 89207 | 303 | - | 0.465347 |
NA | CP0040 | IS629 ORF1 | pCP301 | CDS | 32967 | 327 | - | 0.53211 |
NA | CP0099 | ISSfl1 ORF1 | pCP301 | CDS | 83086 | 540 | - | 0.505556 |
NA | CP0067 | IS629 ORF2 | pCP301 | CDS | 50808 | 669 | + | 0.542601 |
NA | CP0160 | IS1294 transposase | pCP301 | CDS | 137606 | 165 | + | 0.551515 |
NA | CP0037 | hypothetical protein | pCP301 | CDS | 31156 | 396 | + | 0.510101 |
NA | CP0183 | IS629 ORF1 | pCP301 | CDS | 153587 | 327 | + | 0.544343 |
NA | CP0120 | ISSfl2 ORF | pCP301 | CDS | 100321 | 1197 | - | 0.577277 |
NA | CP0060a | hypothetical protein | pCP301 | CDS | 45830 | 273 | + | 0.494505 |
NA | CP0086 | putative protein encoded within IS | pCP301 | CDS | 71614 | 504 | - | 0.541667 |
NA | CP0028 | ISSfl3 ORF | pCP301 | CDS | 23820 | 1224 | - | 0.441176 |
NA | CP0272 | IS629 ORF1 | pCP301 | CDS | 221216 | 168 | - | 0.422619 |
NA | CP0098 | ISSfl1 ORF2 | pCP301 | CDS | 82691 | 390 | - | 0.517949 |
NA | CP0167 | hypothetical protein | pCP301 | CDS | 139920 | 405 | - | 0.493827 |
NA | CP0266 | hypothetical protein | pCP301 | CDS | 216182 | 153 | - | 0.444444 |
NA | CP0111 | hypothetical protein | pCP301 | CDS | 91689 | 165 | + | 0.587879 |
NA | CP0205 | ISSfl4 ORF2 | pCP301 | CDS | 169358 | 351 | - | 0.549858 |
NA | CP0006 | putative protein encoded within IS | pCP301 | CDS | 5264 | 402 | - | 0.557214 |
NA | CP0018 | putative protein encoded within IS | pCP301 | CDS | 15326 | 336 | + | 0.547619 |
NA | CP0041 | IS150 ORF B | pCP301 | CDS | 33299 | 408 | - | 0.490196 |
NA | CP0075 | IS630 ORF | pCP301 | CDS | 59774 | 1032 | + | 0.530039 |
NA | CP0164 | IS1294 transposase | pCP301 | CDS | 74712 | 267 | - | 0.576779 |
NA | CP0034 | hypothetical protein | pCP301 | CDS | 29339 | 183 | - | 0.415301 |
NA | CP0165 | IS3 ORF2 | pCP301 | CDS | 139297 | 294 | - | 0.581633 |
NA | CP0039 | IS629 ORF2 | pCP301 | CDS | 32084 | 669 | - | 0.542601 |
NA | CP0033 | putative transposase | pCP301 | CDS | 29516 | 360 | + | 0.461111 |
NA | CP0062 | ISSfl1 ORF2 | pCP301 | CDS | 47361 | 231 | + | 0.493506 |
NA | CP0191 | ISSfl1 ORF2 | pCP301 | CDS | 160006 | 390 | - | 0.512821 |
NA | CP0162 | hypothetical protein | pCP301 | CDS | 137953 | 357 | - | 0.579832 |
NA | CP0107 | IS600 ORF2 | pCP301 | CDS | 88353 | 819 | - | 0.5116 |
NA | CP0110 | hypothetical protein | pCP301 | CDS | 90503 | 285 | - | 0.424561 |
NA | CP0267 | IS600 ORF1 | pCP301 | CDS | 216373 | 384 | + | 0.484375 |
NA | CP0197 | hypothetical protein | pCP301 | CDS | 164152 | 312 | + | 0.621795 |
NA | CP0180 | IS629 ORF1 | pCP301 | CDS | 147516 | 219 | - | 0.534247 |
NA | CP0203 | putative transposase | pCP301 | CDS | 167032 | 654 | - | 0.492355 |
NA | CP0080 | IS629 ORF1 | pCP301 | CDS | 66115 | 327 | + | 0.53211 |
NA | CP0045 | IS100 ORF2 | pCP301 | CDS | 36124 | 384 | + | 0.450521 |
NA | CP0097 | hypothetical protein | pCP301 | CDS | 82115 | 390 | - | 0.487179 |
NA | CP0064 | putative IS1 encoded protein | pCP301 | CDS | 49511 | 198 | - | 0.484848 |
NA | CP0231 | IS629 ORF1 | pCP301 | CDS | 186424 | 330 | + | 0.545455 |
NA | CP0026 | IS100 ORF1 | pCP301 | CDS | 23117 | 783 | + | 0.508301 |
NA | CP0175 | IS91 ORF | pCP301 | CDS | 144804 | 357 | - | 0.52381 |
NA | CP0256 | hypothetical protein | pCP301 | CDS | 207606 | 168 | + | 0.511905 |
NA | CP0219 | hypothetical protein | pCP301 | CDS | 178125 | 180 | + | 0.405556 |
NA | CP0232 | IS629 ORF2 | pCP301 | CDS | 186968 | 669 | + | 0.541106 |
NA | CP0077 | iso-IS1 ORF2 | pCP301 | CDS | 61397 | 183 | + | 0.546448 |
NA | CP0081 | IS629 ORF2 | pCP301 | CDS | 66656 | 714 | + | 0.543417 |
NA | CP0020 | ISSfl4 ORF3 | pCP301 | CDS | 16028 | 1308 | + | 0.559633 |
NA | CP0168 | hypothetical protein | pCP301 | CDS | 140876 | 717 | - | 0.313808 |
NA | CP0248 | oriT nicking and unwinding protein | pCP301 | CDS | 199216 | 1365 | + | 0.583883 |
NA | CP0068 | putative protein encoded within IS | pCP301 | CDS | 51442 | 489 | + | 0.521472 |
NA | CP0242 | IS600 ORF1 | pCP301 | CDS | 197582 | 303 | - | 0.458746 |
NA | CP0096 | putative IS91 ORF2 | pCP301 | CDS | 82466 | 189 | + | 0.433862 |
NA | CP0085 | IS100 ORF2 | pCP301 | CDS | 71382 | 192 | - | 0.505208 |
NA | CP0247 | oriT nicking and unwinding protein | pCP301 | CDS | 198803 | 393 | + | 0.562341 |
NA | CP0158 | IS600 ORF1 | pCP301 | CDS | 137018 | 303 | - | 0.462046 |
NA | CP0119 | putative transposase | pCP301 | CDS | 99455 | 777 | + | 0.57529 |
NA | CP0221 | putative IS1 encoded protein | pCP301 | CDS | 178876 | 303 | + | 0.541254 |
NA | CP0073 | ISSfl1 ORF1 | pCP301 | CDS | 58935 | 330 | + | 0.50303 |
NA | CP0030 | iso-IS1 ORF2 | pCP301 | CDS | 26244 | 390 | + | 0.520513 |
NA | CP0025 | IS3 ORF2 | pCP301 | CDS | 21746 | 585 | + | 0.528205 |
NA | CP0170 | hypothetical protein | pCP301 | CDS | 142609 | 375 | - | 0.52 |
NA | CP0050 | putative IS1 encoded protein | pCP301 | CDS | 38612 | 213 | - | 0.474178 |
NA | CP0179 | IS629 ORF2 | pCP301 | CDS | 146846 | 564 | - | 0.562057 |
NA | CP0100 | hypothetical protein | pCP301 | CDS | 83645 | 474 | - | 0.350211 |
NA | CP0076 | iso-IS1 ORF1 | pCP301 | CDS | 60987 | 285 | + | 0.494737 |
NA | CP0186 | hypothetical protein | pCP301 | CDS | 156758 | 186 | + | 0.419355 |
NA | CP0089 | transposase/IS protein | pCP301 | CDS | 73674 | 663 | + | 0.494721 |
NA | CP0263 | IS1294 transposase | pCP301 | CDS | 212633 | 189 | - | 0.566138 |
acp | CP0124 | Acp, putative acyl carrier protein | pCP301 | CDS | 106938 | 237 | - | 0.291139 |
ccdA | CP0224 | post-segregation antitoxin | pCP301 | CDS | 180540 | 219 | + | 0.497717 |
ccdB | CP0225 | post-segregation toxin | pCP301 | CDS | 180739 | 327 | + | 0.504587 |
finO | CP0251 | FinO, putative fertility inhibition protein | pCP301 | CDS | 204898 | 561 | + | 0.566845 |
icsA/virG | CP0182 | IcsA (VirG), outermembrane protein exposed to the bacterial surface by a C-terminal autotransporter domain and involved in the movement of intracellul | pCP301 | CDS | 149644 | 3309 | + | 0.409791 |
icsB | CP0132 | IcsB, invasion protein | pCP301 | CDS | 114564 | 1485 | - | 0.338721 |
icsP/sopA | CP0271 | IcsP (SopA), outermembrane protease of the OmpP family, involved in cleavage of surface exposed IcsA | pCP301 | CDS | 220300 | 948 | + | 0.376582 |
insA | CP0049 | IS1 ORF1 | pCP301 | CDS | 38753 | 228 | + | 0.52193 |
insB | CP0220 | IS1 ORF2 | pCP301 | CDS | 178298 | 504 | - | 0.529762 |
insB | CP0065 | IS1 ORF2 | pCP301 | CDS | 49783 | 459 | + | 0.546841 |
insB | CP0051 | IS1 ORF2 | pCP301 | CDS | 39007 | 396 | + | 0.522727 |
ipaA | CP0125 | IpaA, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cells | pCP301 | CDS | 107178 | 1902 | - | 0.351735 |
ipaB | CP0128 | IpaB, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells | pCP301 | CDS | 111248 | 1743 | - | 0.380952 |
ipaC | CP0127 | IpaC, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells | pCP301 | CDS | 110137 | 1092 | - | 0.389194 |
ipaD | CP0126 | IpaD, secreted by the Mxi-Spa machinery, required for entry of bacteria into epithelial cells | pCP301 | CDS | 109088 | 999 | - | 0.357357 |
ipaH1.4 | CP0265 | invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery | pCP301 | CDS | 213152 | 1728 | - | 0.459491 |
ipaH2.5 | CP0054 | invasion plasmid antigen, probably secreted by the Mxi-Spa machinery | pCP301 | CDS | 41197 | 1692 | + | 0.459811 |
ipaH4.5 | CP0079 | invasion plasmid antigen, probably secreted by the Mxi-Spa machinery | pCP301 | CDS | 64339 | 1725 | + | 0.473043 |
ipaH7.8 | CP0078 | invasion plasmid antigen, probably secreted by the Mxi-Spa machinery | pCP301 | CDS | 62214 | 1698 | + | 0.459364 |
ipaH9.8 | CP0226 | invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery | pCP301 | CDS | 181458 | 1638 | + | 0.483516 |
ipaJ | CP0122 | IpaJ, invasion plasmid antigen | pCP301 | CDS | 104066 | 780 | + | 0.378205 |
ipgA | CP0131 | IpgA, similarities to IpgE, putative chaperone | pCP301 | CDS | 114162 | 390 | - | 0.302564 |
ipgB1 | CP0130 | IpgB1, secreted by the Mxi-Spa machinery, function unknown | pCP301 | CDS | 113520 | 627 | - | 0.344498 |
ipgB2 | CP0024 | IpgB2, probably secreted by the Mxi-Spa secretion machinery | pCP301 | CDS | 20683 | 567 | + | 0.326279 |
ipgC | CP0129 | IpgC, cytoplasmic chaperone for IpaB and IpaC | pCP301 | CDS | 112996 | 468 | - | 0.354701 |
ipgD | CP0133 | IpgD, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cells | pCP301 | CDS | 116362 | 1617 | + | 0.357452 |
ipgE | CP0134 | IpgE, cytoplasmic chaperone for IpgD | pCP301 | CDS | 117988 | 363 | + | 0.349862 |
ipgF | CP0135 | IpgF, periplasmic protein, similarities to the catalytic site of lyzozymes | pCP301 | CDS | 118350 | 459 | + | 0.357298 |
ipgH | CP0082 | invasion plasmid gene product | pCP301 | CDS | 68288 | 1404 | + | 0.435185 |
mkaD | CP0010 | mouse killing factor | pCP301 | CDS | 9576 | 720 | - | 0.381944 |
mob9 | CP0228 | plasmid mobilization protein | pCP301 | CDS | 184482 | 180 | - | 0.466667 |
msbB2 | CP0238 | lipid A biosynthesis lauroyl acyltransferase | pCP301 | CDS | 194662 | 945 | + | 0.432804 |
mvpA | CP0245 | plasmid maintenance protein | pCP301 | CDS | 198117 | 399 | - | 0.506266 |
mvpT | CP0246 | plasmid maintenance protein | pCP301 | CDS | 198515 | 228 | - | 0.526316 |
mxiA | CP0147 | MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 126749 | 2061 | + | 0.342067 |
mxiC | CP0146 | MxiC, secreted by and putative component of the Mxi-Spa secretion machinery, similarities to YopN (secreted by the type III secretion machinery of Yer | pCP301 | CDS | 125669 | 1068 | + | 0.33427 |
mxiD | CP0145 | MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 123950 | 1701 | + | 0.33157 |
mxiE | CP0144 | MxiE, similarities to transcriptional activators of the AraC family, function unknown | pCP301 | CDS | 123331 | 633 | + | 0.327014 |
mxiG | CP0136 | MxiG, component of the Mxi-Spa secretion machinery, contains one transmembrane segment | pCP301 | CDS | 118817 | 1116 | + | 0.310932 |
mxiH | CP0137 | MxiH, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 119940 | 252 | + | 0.337302 |
mxiI | CP0138 | MxiI, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 120204 | 294 | + | 0.35034 |
mxiJ | CP0139 | MxiJ, lipoprotein, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 120503 | 726 | + | 0.342975 |
mxiK | CP0140 | MxiK, putative component of the Mxi-Spa secretion machinery | pCP301 | CDS | 121225 | 528 | + | 0.339015 |
mxiL | CP0142 | MxiL, secreted by and putative component of the Mxi-Spa secretion machinery | pCP301 | CDS | 122382 | 408 | + | 0.306373 |
mxiM | CP0143 | MxiM, lipoprotein, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 122773 | 429 | + | 0.298368 |
mxiN | CP0141 | MxiN, putative component of the Mxi-Spa secretion machinery | pCP301 | CDS | 121694 | 696 | + | 0.318966 |
ospB | CP0003 | OspB, protein secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 1176 | 867 | + | 0.32872 |
ospC1 | CP0094 | OspC1, secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 79939 | 1413 | - | 0.318471 |
ospC2 | CP0063 | OspC2, probably secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 47740 | 1455 | - | 0.325086 |
ospC3 | CP0005 | OspC3, probably secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 3471 | 1275 | - | 0.316863 |
ospC4 | CP0115 | OspC4, probably secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 95295 | 1455 | + | 0.315464 |
ospD1 | CP0022 | OspD1, secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 18898 | 678 | + | 0.355457 |
ospD2 | CP0009 | OspD2, probably secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 7435 | 1710 | - | 0.331579 |
ospD3 | CP0093 | OspD3 (SenA), probably secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 77913 | 1698 | - | 0.357479 |
ospG | CP0227 | OspG, secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 183824 | 591 | + | 0.357022 |
parA | CP0031 | plasmid segregation protein | pCP301 | CDS | 26955 | 1200 | + | 0.4425 |
parB | CP0032 | plasmid segregation protein | pCP301 | CDS | 28154 | 981 | + | 0.423038 |
phoN1 | CP0190 | PhoN1, periplasmic non specific acid ohosphatase | pCP301 | CDS | 159087 | 750 | + | 0.422667 |
phoN2/apy | CP0004 | PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase | pCP301 | CDS | 2371 | 741 | + | 0.422402 |
repA | CP0260 | RepA, replication protein | pCP301 | CDS | 209448 | 858 | + | 0.578089 |
repB | CP0258 | RepB, replication protein | pCP301 | CDS | 208897 | 261 | + | 0.417625 |
rfbU | CP0236 | UDP-sugar hydrolase | pCP301 | CDS | 192554 | 1089 | + | 0.43067 |
sepA | CP0070 | SepA, extracellular serine protease of the IgA1 protease family, secreted by a C-terminal autotransporter domain | pCP301 | CDS | 52745 | 4095 | - | 0.487424 |
shf | CP0235 | putative carbohydrate transport protein | pCP301 | CDS | 191709 | 843 | + | 0.400949 |
spa13 | CP0150 | Spa13, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 130612 | 339 | + | 0.336283 |
spa15 | CP0148 | Spa15, putative component of the Mxi-Spa secretion machinery | pCP301 | CDS | 128822 | 402 | + | 0.333333 |
spa24 | CP0153 | Spa24, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 132695 | 651 | + | 0.345622 |
spa29 | CP0155 | Spa29, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 133620 | 771 | + | 0.326848 |
spa32 | CP0151 | Spa32, secreted by and component of the Mxi-Spa machinery | pCP301 | CDS | 130937 | 879 | + | 0.315131 |
spa33 | CP0152 | Spa33, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 131944 | 747 | + | 0.314592 |
spa40 | CP0156 | type III secretion protein | pCP301 | CDS | 134397 | 1029 | + | 0.317784 |
spa47 | CP0149 | type III secretion system ATPase | pCP301 | CDS | 129227 | 1293 | + | 0.392111 |
spa9 | CP0154 | Spa9, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 133360 | 261 | + | 0.344828 |
stbA | CP0195 | plasmid stable inheritance protein | pCP301 | CDS | 161854 | 960 | - | 0.398958 |
stbB | CP0194 | plasmid stable inheritance protein | pCP301 | CDS | 161459 | 396 | - | 0.388889 |
tap | CP0259 | TapA | pCP301 | CDS | 209381 | 75 | + | 0.493333 |
traD | CP0243 | DNA transport protein | pCP301 | CDS | 197923 | 186 | + | 0.543011 |
traX | CP0250 | F pilin acetylation protein | pCP301 | CDS | 204097 | 747 | + | 0.576975 |
trbH | CP0244 | hypothetical protein | pCP301 | CDS | 198108 | 720 | + | 0.495833 |
ushA | CP0185 | UshA, probable periplasmic UDP-sugar hydrolase | pCP301 | CDS | 155137 | 1653 | + | 0.404719 |
virA | CP0181 | VirA, secreted by the Mxi-Spa secretion machinery, function unknown | pCP301 | CDS | 147913 | 1203 | - | 0.352452 |
virB | CP0123 | VirB, transcriptional activator required for tanscription of the ipa, mxi, and spa operons | pCP301 | CDS | 105792 | 930 | - | 0.339785 |
virF | CP0046 | VirF, member of the AraC family of transcriptional activators, required for transcription of virB and icsA | pCP301 | CDS | 36449 | 789 | - | 0.304182 |
virK | CP0237 | VirK, required for proper localization of IcsA (VirG) at the surface of bacteria | pCP301 | CDS | 193647 | 951 | + | 0.416404 |
yccB | CP0196 | hypothetical protein | pCP301 | CDS | 163184 | 972 | + | 0.540123 |
ycdA | CP0198 | hypothetical protein | pCP301 | CDS | 164527 | 684 | + | 0.55848 |
yceA | CP0199 | hypothetical protein | pCP301 | CDS | 165211 | 222 | + | 0.531532 |
ycfA | CP0202 | hypothetical protein | pCP301 | CDS | 165923 | 771 | + | 0.607004 |
yigA | CP0252 | hypothetical protein | pCP301 | CDS | 205589 | 213 | + | 0.615023 |
yigB | CP0253 | hypothetical protein | pCP301 | CDS | 205985 | 303 | + | 0.455446 |
yihA | CP0257 | hypothetical protein | pCP301 | CDS | 208067 | 591 | + | 0.492386 |