Gene list
Applied filters:
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: pCD
Number of genes found: 89
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis Antiqua, Antiqua | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPA_CD0070 | transposase remnant | pCD | CDS | 61393 | 279 | + | 0.508961 |
NA | YPA_CD0084 | hypothetical protein | pCD | CDS | 42105 | 174 | - | 0.471264 |
NA | YPA_CD0003 | type III secretion regulatory protein | pCD | CDS | 2722 | 348 | - | 0.479885 |
NA | YPA_CD0002 | ATP-binding protein | pCD | CDS | 1110 | 780 | + | 0.503846 |
NA | YPA_CD0077 | transposase | pCD | CDS | 69485 | 309 | - | 0.459547 |
NA | YPA_CD0030 | V antigen, antihost protein/regulator | pCD | CDS | 24840 | 981 | + | 0.377166 |
NA | YPA_CD0062 | hypothetical protein | pCD | CDS | 54615 | 921 | + | 0.421281 |
NA | YPA_CD0039 | hypothetical protein | pCD | CDS | 31936 | 192 | + | 0.458333 |
NA | YPA_CD0089 | hypothetical protein | pCD | CDS | 66165 | 93 | + | 0.387097 |
NA | YPA_CD0059 | resolvase | pCD | CDS | 50219 | 552 | - | 0.46558 |
NA | YPA_CD0029 | low calcium response locus protein R | pCD | CDS | 24069 | 441 | + | 0.489796 |
NA | YPA_CD0050 | hypothetical protein | pCD | CDS | 42822 | 243 | + | 0.440329 |
NA | YPA_CD0054 | transposase | pCD | CDS | 45551 | 1173 | + | 0.546462 |
NA | YPA_CD0067 | Phospholipase D/Transphosphatidylase | pCD | CDS | 57994 | 249 | + | 0.493976 |
NA | YPA_CD0032 | Yop targeting protein | pCD | CDS | 26317 | 1206 | + | 0.466833 |
NA | YPA_CD0023 | membrane-bound Yop targeting protein | pCD | CDS | 19767 | 882 | + | 0.461451 |
NA | YPA_CD0014 | thermoregulatory protein | pCD | CDS | 10828 | 816 | - | 0.416667 |
NA | YPA_CD0069 | replication initiation protein | pCD | CDS | 58943 | 867 | + | 0.542099 |
NA | YPA_CD0016 | type III secretion protein | pCD | CDS | 13802 | 786 | - | 0.428753 |
NA | YPA_CD0066 | hypothetical protein | pCD | CDS | 57170 | 408 | + | 0.539216 |
NA | YPA_CD0036 | hypothetical protein | pCD | CDS | 29587 | 210 | + | 0.428571 |
NA | YPA_CD0007 | type III secretion protein | pCD | CDS | 5275 | 348 | - | 0.468391 |
NA | YPA_CD0044 | conjugative transfer surface exclusion protein | pCD | CDS | 36803 | 618 | + | 0.487055 |
NA | YPA_CD0085 | hypothetical protein | pCD | CDS | 43057 | 300 | + | 0.38 |
NA | YPA_CD0010 | type III secretion protein | pCD | CDS | 6466 | 264 | - | 0.416667 |
NA | YPA_CD0074 | hypothetical protein | pCD | CDS | 67078 | 207 | + | 0.608696 |
NA | YPA_CD0027 | type III secretion protein | pCD | CDS | 21627 | 345 | + | 0.46087 |
NA | YPA_CD0078 | transposase | pCD | CDS | 69790 | 381 | - | 0.435696 |
NA | YPA_CD0045 | hypothetical protein | pCD | CDS | 37527 | 318 | + | 0.487421 |
NA | YPA_CD0072 | targeted effector protein | pCD | CDS | 65018 | 867 | + | 0.344867 |
NA | YPA_CD0055 | transposase | pCD | CDS | 46723 | 357 | + | 0.591036 |
NA | YPA_CD0033 | Yop negative regulation/targeting component | pCD | CDS | 27541 | 921 | + | 0.431053 |
NA | YPA_CD0028 | membrane-bound Yop protein | pCD | CDS | 21958 | 2115 | + | 0.463357 |
NA | YPA_CD0088 | hypothetical protein | pCD | CDS | 61967 | 450 | + | 0.451111 |
NA | YPA_CD0019 | type III secretion protein | pCD | CDS | 15502 | 924 | - | 0.481602 |
NA | YPA_CD0063 | hypothetical protein | pCD | CDS | 55861 | 189 | - | 0.492063 |
NA | YPA_CD0083 | hypothetical protein | pCD | CDS | 38770 | 114 | - | 0.561404 |
NA | YPA_CD0040 | hypothetical protein | pCD | CDS | 33092 | 123 | - | 0.406504 |
NA | YPA_CD0005 | type III secretion protein | pCD | CDS | 3905 | 630 | - | 0.485714 |
NA | YPA_CD0015 | type III secretion protein | pCD | CDS | 12738 | 1065 | - | 0.431925 |
NA | YPA_CD0073 | hypothetical protein | pCD | CDS | 66470 | 648 | - | 0.503086 |
NA | YPA_CD0053 | hypothetical protein | pCD | CDS | 44804 | 615 | - | 0.547967 |
NA | YPA_CD0024 | Yop secretion and targeting protein | pCD | CDS | 20629 | 279 | + | 0.433692 |
NA | YPA_CD0061 | transposase | pCD | CDS | 50934 | 2316 | + | 0.51943 |
NA | YPA_CD0049 | plasmid partitioning control protein | pCD | CDS | 40595 | 966 | + | 0.417184 |
NA | YPA_CD0031 | yopB/yopD chaperone | pCD | CDS | 25833 | 507 | + | 0.441815 |
NA | YPA_CD0076 | hypothetical protein | pCD | CDS | 69194 | 180 | - | 0.466667 |
NA | YPA_CD0009 | type III secretion protein | pCD | CDS | 6117 | 348 | - | 0.439655 |
NA | YPA_CD0058 | transposase | pCD | CDS | 48902 | 267 | - | 0.479401 |
NA | YPA_CD0041 | yopT chaperone | pCD | CDS | 33779 | 399 | - | 0.411028 |
NA | YPA_CD0011 | type III secretion protein | pCD | CDS | 6927 | 1260 | - | 0.46746 |
NA | YPA_CD0075 | protein-tyrosine phosphatase Yop effector | pCD | CDS | 67567 | 1407 | + | 0.474058 |
NA | YPA_CD0051 | outer membrane virulence protein | pCD | CDS | 43496 | 660 | - | 0.510606 |
NA | YPA_CD0008 | type III secretion protein | pCD | CDS | 5623 | 498 | - | 0.429719 |
NA | YPA_CD0060 | hypothetical protein | pCD | CDS | 53246 | 381 | - | 0.509186 |
NA | YPA_CD0052 | yopE chaperone | pCD | CDS | 44349 | 393 | + | 0.409669 |
NA | YPA_CD0068 | replication transcriptional regulator | pCD | CDS | 58380 | 255 | + | 0.423529 |
NA | YPA_CD0081 | type III secretion protein | pCD | CDS | 6730 | 201 | - | 0.422886 |
NA | YPA_CD0021 | type III secretion protein | pCD | CDS | 17789 | 465 | - | 0.458065 |
NA | YPA_CD0048 | plasmid partitioning transcription repressor | pCD | CDS | 39390 | 1209 | + | 0.434243 |
NA | YPA_CD0038 | protein 25 | pCD | CDS | 31462 | 300 | - | 0.436667 |
NA | YPA_CD0020 | type III secretion protein | pCD | CDS | 16422 | 1368 | - | 0.486842 |
NA | YPA_CD0022 | Yop secretion ATP synthase | pCD | CDS | 18250 | 1320 | - | 0.508333 |
NA | YPA_CD0034 | hypothetical protein | pCD | CDS | 28929 | 132 | - | 0.462121 |
NA | YPA_CD0047 | transposase remnant | pCD | CDS | 38438 | 195 | + | 0.497436 |
NA | YPA_CD0071 | targeted effector protein kinase | pCD | CDS | 62424 | 2199 | + | 0.481583 |
NA | YPA_CD0012 | type III secretion protein | pCD | CDS | 8183 | 1824 | - | 0.454496 |
NA | YPA_CD0037 | targeted effector protein | pCD | CDS | 30367 | 1053 | + | 0.391263 |
NA | YPA_CD0082 | hypothetical protein | pCD | CDS | 29444 | 123 | - | 0.463415 |
NA | YPA_CD0043 | hypothetical protein | pCD | CDS | 36337 | 240 | + | 0.491667 |
NA | YPA_CD0065 | hypothetical protein | pCD | CDS | 56829 | 318 | + | 0.493711 |
NA | YPA_CD0035 | transposase | pCD | CDS | 29095 | 324 | - | 0.388889 |
NA | YPA_CD0079 | Yop regulator | pCD | CDS | 24551 | 288 | + | 0.46875 |
NA | YPA_CD0026 | type III secretion protein | pCD | CDS | 21262 | 369 | + | 0.495935 |
NA | YPA_CD0013 | hypothetical protein | pCD | CDS | 10012 | 414 | - | 0.417874 |
NA | YPA_CD0080 | transposase ORFA | pCD | CDS | 1899 | 276 | - | 0.460145 |
NA | YPA_CD0018 | Yop secretion membrane protein | pCD | CDS | 14852 | 654 | - | 0.43578 |
NA | YPA_CD0056 | yopH targeting protein | pCD | CDS | 47496 | 426 | + | 0.41784 |
NA | YPA_CD0087 | transposase remnant | pCD | CDS | 57839 | 96 | + | 0.479167 |
NA | YPA_CD0064 | hypothetical protein | pCD | CDS | 56199 | 459 | + | 0.555556 |
NA | YPA_CD0086 | hypothetical protein | pCD | CDS | 55658 | 207 | + | 0.449275 |
NA | YPA_CD0001 | transposase | pCD | CDS | 88 | 1023 | + | 0.527859 |
NA | YPA_CD0004 | type III secretion protein | pCD | CDS | 3294 | 633 | - | 0.450237 |
NA | YPA_CD0042 | cytotoxic effector protein | pCD | CDS | 34177 | 969 | - | 0.431373 |
NA | YPA_CD0025 | type III secretion protein | pCD | CDS | 20894 | 372 | + | 0.526882 |
NA | YPA_CD0006 | type III secretion lipoprotein | pCD | CDS | 4534 | 735 | - | 0.428571 |
NA | YPA_CD0046 | hypothetical protein | pCD | CDS | 37868 | 459 | + | 0.551198 |
NA | YPA_CD0057 | transposase | pCD | CDS | 48069 | 756 | - | 0.497355 |
NA | YPA_CD0017 | type III secretion protein | pCD | CDS | 14584 | 267 | - | 0.453184 |