Gene list
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Organism: Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
Number of genes found: 1166
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BPEN_329 | tRNA-Met | chromosome | tRNA | 388892 | 74 | - | 0.527027 |
NA | BPEN_472 | tRNA-Ser | chromosome | tRNA | 565110 | 93 | + | 0.451613 |
NA | BPEN_022 | tRNA-Pro | chromosome | tRNA | 25305 | 74 | + | 0.513514 |
NA | BPEN_539 | chromosome | RBS | 644901 | 5 | + | 0.2 | |
NA | BPEN_522 | tRNA-Val | chromosome | tRNA | 625335 | 74 | + | 0.540541 |
NA | BPEN_429 | tRNA-Ser | chromosome | tRNA | 505723 | 84 | - | 0.488095 |
NA | BPEN_604 | tRNA-Leu | chromosome | tRNA | 725947 | 86 | - | 0.5 |
NA | BPEN_018 | chromosome | RBS | 20813 | 5 | - | 0.4 | |
NA | BPEN_070 | tRNA-Phe | chromosome | tRNA | 84233 | 73 | - | 0.561644 |
NA | BPEN_615 | tRNA-Trp | chromosome | tRNA | 738175 | 74 | - | 0.5 |
NA | BPEN_314 | tRNA-Arg | chromosome | tRNA | 372439 | 74 | + | 0.432432 |
NA | BPEN_426 | tRNA-Cys | chromosome | tRNA | 503817 | 71 | - | 0.535211 |
NA | BPEN_603 | tRNA-Pro | chromosome | tRNA | 725761 | 74 | - | 0.648649 |
NA | BPEN_234 | tRNA-Thr | chromosome | tRNA | 264259 | 74 | + | 0.459459 |
NA | BPEN_473 | tRNA-Asn | chromosome | tRNA | 565484 | 76 | + | 0.513158 |
NA | BPEN_425 | tRNA-Leu | chromosome | tRNA | 503721 | 82 | - | 0.52439 |
NA | BPEN_194 | chromosome | pseudo | 241837 | 72 | + | 0.444444 | |
NA | BPEN_573 | tRNA-Glu | chromosome | tRNA | 684298 | 73 | - | 0.616438 |
NA | BPEN_535 | chromosome | RBS | 641549 | 5 | - | 0.6 | |
NA | BPEN_523 | tRNA-Lys | chromosome | tRNA | 625433 | 73 | + | 0.493151 |
NA | BPEN_105 | tRNA-Leu | chromosome | tRNA | 123302 | 86 | + | 0.488372 |
NA | BPEN_336 | hypothetical protein | chromosome | CDS | 398327 | 144 | - | 0.229167 |
NA | BPEN_376 | tRNA-Val | chromosome | tRNA | 443624 | 74 | - | 0.486486 |
NA | BPEN_489 | tRNA-Pro | chromosome | tRNA | 583842 | 74 | + | 0.581081 |
NA | BPEN_106 | tRNA-Met | chromosome | tRNA | 123459 | 77 | + | 0.636364 |
NA | BPEN_336 | chromosome | RBS | 398481 | 5 | - | 0.6 | |
NA | BPEN_617 | tRNA-Ala | chromosome | tRNA | 738483 | 73 | - | 0.547945 |
NA | BPEN_039 | tRNA-Leu | chromosome | tRNA | 49580 | 83 | + | 0.53012 |
NA | BPEN_606 | tRNA-Arg | chromosome | tRNA | 726172 | 74 | - | 0.567568 |
NA | BPEN_640 | putative transcriptional regulator protein (MarR family) | chromosome | CDS | 764849 | 441 | + | 0.30839 |
NA | BPEN_517 | tRNA-Arg | chromosome | tRNA | 620052 | 72 | + | 0.416667 |
NA | BPEN_193 | tRNA-Tyr | chromosome | tRNA | 241683 | 82 | + | 0.52439 |
NA | BPEN_539 | hypothetical protein | chromosome | CDS | 644913 | 201 | + | 0.253731 |
NA | BPEN_177 | tRNA-Arg | chromosome | tRNA | 225453 | 74 | + | 0.581081 |
NA | BPEN_078 | tRNA-Gly | chromosome | tRNA | 93827 | 76 | + | 0.565789 |
NA | BPEN_520 | tRNA-Ala | chromosome | tRNA | 623512 | 73 | - | 0.589041 |
NA | BPEN_176 | tRNA-Ser | chromosome | tRNA | 225347 | 92 | + | 0.543478 |
NA | BPEN_535 | conserved hypothetical protein (NT02BF0496) | chromosome | CDS | 641232 | 312 | - | 0.285256 |
NA | BPEN_195 | tRNA-Thr | chromosome | tRNA | 241930 | 77 | + | 0.519481 |
NA | BPEN_658 | tRNA-Ile | chromosome | tRNA | 790949 | 77 | + | 0.545455 |
NA | BPEN_471 | tRNA-Ser | chromosome | tRNA | 564571 | 92 | + | 0.467391 |
NA | BPEN_605 | tRNA-His | chromosome | tRNA | 726053 | 75 | - | 0.506667 |
NA | BPEN_192 | tRNA-Thr | chromosome | tRNA | 241597 | 73 | + | 0.438356 |
NA | BPEN_018 | probable transmembrane protein | chromosome | CDS | 19765 | 1008 | - | 0.263889 |
NA | BPEN_040 | conserved hypothetical protein (NT02BF0038) | chromosome | CDS | 49993 | 138 | + | 0.384058 |
NA | BPEN_640 | chromosome | RBS | 764834 | 5 | + | 0.4 | |
NA | BPEN_428 | tRNA-Lys | chromosome | tRNA | 505354 | 74 | + | 0.445946 |
NA | BPEN_327 | tRNA-Gln | chromosome | tRNA | 388628 | 72 | - | 0.597222 |
NA | BPEN_328 | tRNA-Leu | chromosome | tRNA | 388783 | 82 | - | 0.5 |
NA | BPEN_040 | chromosome | RBS | 49980 | 5 | + | 0.4 | |
NA | BPEN_616 | tRNA-Asp | chromosome | tRNA | 738269 | 74 | - | 0.635135 |
NA | BPEN_056 | tRNA-Met | chromosome | tRNA | 67551 | 75 | - | 0.56 |
accA | BPEN_295 | acetylCoA carboxylase, carboxytransferase subunit alpha | chromosome | CDS | 343661 | 960 | + | 0.344792 |
accA | BPEN_295 | chromosome | RBS | 343652 | 5 | + | 0.4 | |
accB | BPEN_300 | acetylCoA carboxylase, BCCP subunit | chromosome | CDS | 350710 | 453 | - | 0.313466 |
accB | BPEN_300 | chromosome | RBS | 351249 | 5 | - | 0.6 | |
accC | BPEN_299 | chromosome | RBS | 350706 | 5 | - | 0.6 | |
accC | BPEN_299 | acetyl CoA carboxylase, biotin carboxylase subunit | chromosome | CDS | 349344 | 1356 | - | 0.338496 |
accD | BPEN_511 | acetyl-CoA carboxylase beta subunit | chromosome | CDS | 611837 | 885 | - | 0.352542 |
accD | BPEN_511 | chromosome | RBS | 612792 | 5 | - | 0.4 | |
aceE | BPEN_158 | chromosome | RBS | 199575 | 5 | - | 0.4 | |
aceE | BPEN_158 | pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding | chromosome | CDS | 196900 | 2667 | - | 0.345707 |
aceF | BPEN_157 | pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) | chromosome | CDS | 195617 | 1272 | - | 0.319969 |
acpP | BPEN_415 | chromosome | RBS | 491861 | 5 | - | 0.4 | |
acpP | BPEN_415 | acyl carrier protein | chromosome | CDS | 491600 | 252 | - | 0.333333 |
acpS | BPEN_558 | chromosome | RBS | 668438 | 5 | - | 0.4 | |
acpS | BPEN_558 | holo-[acyl-carrier-protein] synthase | chromosome | CDS | 668053 | 378 | - | 0.298942 |
adk | BPEN_310 | chromosome | RBS | 367257 | 5 | + | 0.4 | |
adk | BPEN_310 | ATP-AMP transphosphorylase | chromosome | CDS | 367270 | 654 | + | 0.308868 |
ahpC | BPEN_235 | alkyl hydroperoxide reductase C22 protein | chromosome | CDS | 264460 | 603 | - | 0.344942 |
ahpC | BPEN_235 | chromosome | RBS | 265068 | 5 | - | 0.4 | |
alaS | BPEN_174 | alanyl-tRNA synthetase | chromosome | CDS | 222183 | 2640 | + | 0.297348 |
alaS | BPEN_174 | chromosome | RBS | 222173 | 5 | + | 0.4 | |
amiB | BPEN_080 | N-acetylmuramoyl-L-alanine amidase | chromosome | CDS | 94972 | 1272 | + | 0.308176 |
amiB | BPEN_080 | chromosome | RBS | 94958 | 5 | + | 0.4 | |
apaH | BPEN_129 | chromosome | RBS | 157885 | 5 | - | 0.4 | |
apaH | BPEN_129 | bis(5'-nucleosyl)-tetraphosphatase | chromosome | CDS | 156974 | 822 | - | 0.306569 |
apt | BPEN_308 | adenine phosphoribosyltransferase | chromosome | CDS | 363915 | 555 | + | 0.322523 |
apt | BPEN_308 | chromosome | RBS | 363905 | 5 | + | 0.4 | |
argI | BPEN_032 | chromosome | RBS | 40529 | 5 | - | 0.4 | |
argI | BPEN_032 | ornithine carbamoyltransferase | chromosome | CDS | 39495 | 1026 | - | 0.311891 |
argS | BPEN_468 | arginyl-tRNA synthetase | chromosome | CDS | 559209 | 1746 | + | 0.290378 |
aroA | BPEN_393 | chromosome | RBS | 463732 | 5 | - | 0.6 | |
aroA | BPEN_393 | 3-phosphoshikimate 1-carboxyvinyltransferase | chromosome | CDS | 462385 | 1299 | - | 0.355658 |
aroB | BPEN_591 | chromosome | RBS | 711482 | 5 | - | 0.6 | |
aroB | BPEN_591 | 3-dehydroquinate synthase | chromosome | CDS | 710332 | 1089 | - | 0.332415 |
aroC | BPEN_516 | chorismate synthase | chromosome | CDS | 618679 | 1065 | + | 0.360563 |
aroC | BPEN_516 | chromosome | RBS | 618594 | 5 | + | 0.6 | |
aroE | BPEN_228 | chromosome | RBS | 259366 | 5 | + | 0.6 | |
aroE | BPEN_228 | shikimate 5-dehydrogenase | chromosome | CDS | 259379 | 876 | + | 0.297945 |
aroF | BPEN_183 | 3-deoxy-7-phosphoheptulonate synthase | chromosome | CDS | 229622 | 1086 | + | 0.3407 |
aroF | BPEN_183 | chromosome | RBS | 229611 | 5 | + | 0.4 | |
aroK | BPEN_592 | shikimate kinase I | chromosome | CDS | 711475 | 564 | - | 0.349291 |
aroK | BPEN_592 | chromosome | RBS | 712047 | 5 | - | 0.2 | |
aroQ | BPEN_301 | chromosome | RBS | 351654 | 5 | - | 0.4 | |
aroQ | BPEN_301 | 3-dehydroquinate dehydratase | chromosome | CDS | 351184 | 459 | - | 0.315904 |
asd | BPEN_594 | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 714278 | 1107 | - | 0.339657 |
asnS | BPEN_433 | asparaginyl-tRNA synthetase | chromosome | CDS | 508697 | 1413 | + | 0.314225 |
asnS | BPEN_433 | chromosome | RBS | 508684 | 5 | + | 0.6 | |
aspC | BPEN_434 | aspartate aminotransferase | chromosome | CDS | 510328 | 1206 | + | 0.310116 |
aspC | BPEN_434 | chromosome | RBS | 510259 | 5 | + | 0.4 | |
aspS | BPEN_467 | chromosome | RBS | 558585 | 5 | - | 0.6 | |
aspS | BPEN_467 | aspartyl-tRNA synthetase | chromosome | CDS | 556853 | 1725 | - | 0.310725 |
atpA | BPEN_006 | chromosome | RBS | 4803 | 5 | + | 0.4 | |
atpA | BPEN_006 | ATP synthase subunit A | chromosome | CDS | 4831 | 1542 | + | 0.357977 |
atpB | BPEN_002 | ATP synthase subunit A | chromosome | CDS | 2617 | 810 | + | 0.312346 |
atpB | BPEN_002 | chromosome | RBS | 2608 | 5 | + | 0.6 | |
atpC | BPEN_009 | chromosome | RBS | 8717 | 5 | + | 0.4 | |
atpC | BPEN_009 | ATP synthase, F1 sector, epsilon-subunit | chromosome | CDS | 8728 | 435 | + | 0.312644 |
atpD | BPEN_008 | chromosome | RBS | 7253 | 5 | + | 0.6 | |
atpD | BPEN_008 | ATP synthase subunit B | chromosome | CDS | 7302 | 1389 | + | 0.348452 |
atpE | BPEN_003 | ATP synthase subunit C | chromosome | CDS | 3466 | 240 | + | 0.379167 |
atpE | BPEN_003 | chromosome | RBS | 3455 | 5 | + | 0.6 | |
atpF | BPEN_004 | ATP synthase, F0 sector, subunit b | chromosome | CDS | 3765 | 483 | + | 0.302277 |
atpF | BPEN_004 | chromosome | RBS | 3753 | 5 | + | 0.4 | |
atpG | BPEN_007 | ATP synthase, F1 sector, gamma-subunit | chromosome | CDS | 6405 | 867 | + | 0.311419 |
atpH | BPEN_005 | ATP synthase, F1 sector, delta-subunit | chromosome | CDS | 4248 | 546 | + | 0.287546 |
bacA | BPEN_063 | bacitracin resistance protein | chromosome | CDS | 74475 | 885 | + | 0.289266 |
bcp | BPEN_537 | chromosome | RBS | 642923 | 5 | + | 0.6 | |
bcp | BPEN_537 | bacterioferritin comigratory protein | chromosome | CDS | 642934 | 486 | + | 0.3107 |
bfr | BPEN_196 | bacterioferritin | chromosome | CDS | 242155 | 471 | + | 0.295117 |
bfr | BPEN_196 | chromosome | RBS | 242145 | 5 | + | 0.6 | |
birA | BPEN_190 | biotin-[acetylCoA carboxylase] holoenzyme synthetase | chromosome | CDS | 239424 | 816 | + | 0.29902 |
birA | BPEN_190 | chromosome | RBS | 239408 | 5 | + | 0.6 | |
carA | BPEN_126 | carbamoyl-phosphate synthase small subunit | chromosome | CDS | 151822 | 1140 | + | 0.341228 |
carB | BPEN_127 | carbamoyl-phosphate synthase, large chain | chromosome | CDS | 152983 | 3228 | + | 0.337051 |
carB | BPEN_127 | chromosome | RBS | 152969 | 5 | + | 0.6 | |
cca | BPEN_064 | tRNA nucleotidyltransferase | chromosome | CDS | 75623 | 1227 | - | 0.336593 |
cdsA | BPEN_285 | phosphatidate cytidylyltransferase | chromosome | CDS | 330588 | 861 | + | 0.308943 |
cgtA | BPEN_098 | putative GTP-binding protein | chromosome | CDS | 115536 | 1023 | + | 0.330401 |
clpB | BPEN_188 | ATP-dependent protease | chromosome | CDS | 235325 | 2577 | + | 0.33605 |
clpB | BPEN_188 | chromosome | RBS | 235310 | 5 | + | 0.4 | |
clpP | BPEN_253 | chromosome | RBS | 287400 | 5 | + | 0.4 | |
clpP | BPEN_253 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 287418 | 627 | + | 0.333333 |
clpX | BPEN_254 | ATP-dependent Clp protease ATP-binding subunit | chromosome | CDS | 288183 | 1260 | + | 0.309524 |
clpX | BPEN_254 | chromosome | RBS | 288170 | 5 | + | 0.4 | |
cls | BPEN_446 | cardiolipin synthetase | chromosome | CDS | 528045 | 1470 | + | 0.344898 |
cls | BPEN_446 | chromosome | RBS | 528030 | 5 | + | 0.4 | |
cmk | BPEN_392 | cytidine monophosphate (CMP) kinase | chromosome | CDS | 461537 | 720 | - | 0.325 |
coaA | BPEN_191 | chromosome | RBS | 241336 | 5 | - | 0.2 | |
coaA | BPEN_191 | pantothenate kinase | chromosome | CDS | 240388 | 942 | - | 0.278132 |
coaD | BPEN_634 | CMP-deoxy-D-manno-octulosonate-lipid A transferase | chromosome | CDS | 758957 | 516 | + | 0.294574 |
coaE | BPEN_153 | Dephospho-CoA kinase | chromosome | CDS | 189805 | 639 | - | 0.283255 |
corA | BPEN_597 | chromosome | RBS | 718722 | 5 | - | 0.4 | |
corA | BPEN_597 | Mg2+/Ni2+/Co2+ transport protein (Mg transport system I) (MIT family) | chromosome | CDS | 717767 | 945 | - | 0.251852 |
cspC | BPEN_462 | chromosome | RBS | 549671 | 5 | - | 0.4 | |
cspC | BPEN_462 | cold shock-like protein | chromosome | CDS | 549452 | 210 | - | 0.357143 |
csrA | BPEN_175 | carbon storage regulator | chromosome | CDS | 225010 | 186 | + | 0.376344 |
csrA | BPEN_175 | chromosome | RBS | 224999 | 5 | + | 0.6 | |
cutA | BPEN_071 | periplasmic divalent cation tolerance protein | chromosome | CDS | 84670 | 318 | - | 0.323899 |
cutA | BPEN_071 | chromosome | RBS | 85069 | 5 | - | 0.2 | |
cyoA | BPEN_252 | cytochrome o ubiquinol oxidase, subunit II | chromosome | CDS | 284306 | 885 | - | 0.303955 |
cyoA | BPEN_252 | chromosome | RBS | 285237 | 5 | - | 0.4 | |
cyoB | BPEN_251 | chromosome | RBS | 284240 | 5 | - | 0.4 | |
cyoB | BPEN_251 | cytochrome o ubiquinol oxidase, subunit I | chromosome | CDS | 282269 | 1962 | - | 0.330785 |
cyoC | BPEN_250 | cytochrome o ubiquinol oxidase, subunit III | chromosome | CDS | 281704 | 588 | - | 0.280612 |
cyoD | BPEN_249 | cytochrome o ubiquinol oxidase, subunit IV | chromosome | CDS | 281398 | 303 | - | 0.231023 |
cyoD | BPEN_249 | chromosome | RBS | 281712 | 5 | - | 0.8 | |
cyoE | BPEN_248 | protohaeme IX farnesyltransferase | chromosome | CDS | 280494 | 885 | - | 0.280226 |
cysA | BPEN_528 | chromosome | RBS | 632845 | 5 | - | 0.4 | |
cysA | BPEN_528 | sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) | chromosome | CDS | 631772 | 1068 | - | 0.345506 |
cysC | BPEN_169 | adenosine 5-phosphosulfate kinase | chromosome | CDS | 217135 | 636 | + | 0.328616 |
cysC | BPEN_169 | chromosome | RBS | 217121 | 5 | + | 0.2 | |
cysD | BPEN_167 | ATP-sulfurylase, subunit 2 | chromosome | CDS | 214767 | 915 | + | 0.335519 |
cysE | BPEN_625 | serine acetyltransferase | chromosome | CDS | 748372 | 750 | - | 0.322667 |
cysG | BPEN_166 | 1,3-dimethyluroporphyriongen III dehydrogenase | chromosome | CDS | 213326 | 1425 | + | 0.330526 |
cysH | BPEN_165 | chromosome | RBS | 212222 | 5 | + | 0.6 | |
cysH | BPEN_165 | phosphoadenosine phosphosulfate reductase | chromosome | CDS | 212284 | 762 | + | 0.317585 |
cysI | BPEN_164 | chromosome | RBS | 210484 | 5 | + | 0.8 | |
cysI | BPEN_164 | sulfite reductase, beta subunit, NADPH-dependent hemoprotein | chromosome | CDS | 210564 | 1728 | + | 0.336227 |
cysJ | BPEN_163 | chromosome | RBS | 208730 | 5 | + | 0.4 | |
cysJ | BPEN_163 | sulfite reductase, alpha subunit (flavoprotein) | chromosome | CDS | 208744 | 1821 | + | 0.317957 |
cysK | BPEN_525 | chromosome | RBS | 627920 | 5 | + | 0.4 | |
cysK | BPEN_525 | cysteine synthase A | chromosome | CDS | 627934 | 948 | + | 0.352321 |
cysN | BPEN_168 | ATP-sulfurylase, subunit 1 | chromosome | CDS | 215691 | 1431 | + | 0.321454 |
cysN | BPEN_168 | chromosome | RBS | 215682 | 5 | + | 0.4 | |
cysP | BPEN_531 | thiosulfate transport protein (ABC superfamily, peri_bind) | chromosome | CDS | 634554 | 1023 | - | 0.324536 |
cysP | BPEN_531 | chromosome | RBS | 635617 | 5 | - | 0.4 | |
cysQ | BPEN_091 | CysQ | chromosome | CDS | 105822 | 756 | + | 0.329365 |
cysS | BPEN_312 | cysteinyl-tRNA synthetase | chromosome | CDS | 369936 | 1422 | + | 0.292546 |
cysS | BPEN_312 | chromosome | RBS | 369876 | 5 | + | 0.4 | |
cysU | BPEN_530 | chromosome | RBS | 634562 | 5 | - | 0.6 | |
cysU | BPEN_530 | thiosulfate transport protein (ABC superfamily, membrane) | chromosome | CDS | 633721 | 834 | - | 0.348921 |
cysW | BPEN_529 | thiosulfate permease W protein (ABC superfamily, membrane) | chromosome | CDS | 632861 | 861 | - | 0.308943 |
cysW | BPEN_529 | chromosome | RBS | 633727 | 5 | - | 0.6 | |
dapA | BPEN_536 | chromosome | RBS | 642474 | 5 | - | 0.6 | |
dapA | BPEN_536 | dihydrodipicolinate synthase | chromosome | CDS | 641564 | 900 | - | 0.356667 |
dapB | BPEN_125 | dihydrodipicolinate reductase | chromosome | CDS | 150726 | 849 | + | 0.309776 |
dapD | BPEN_277 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase | chromosome | CDS | 322804 | 852 | - | 0.348592 |
dapD | BPEN_277 | chromosome | misc_feature | 323636 | 5 | - | 0.4 | |
dapD | BPEN_277 | chromosome | misc_feature | 323625 | 1 | - | ||
dapE | BPEN_534 | succinyl-diaminopimelate desuccinylase | chromosome | CDS | 639918 | 1155 | + | 0.327273 |
dapE | BPEN_534 | chromosome | RBS | 639905 | 5 | + | 0.6 | |
dapF | BPEN_600 | chromosome | RBS | 722900 | 5 | - | 0.6 | |
dapF | BPEN_600 | diaminopimelate epimerase | chromosome | CDS | 722069 | 825 | - | 0.338182 |
ddlA | BPEN_490 | chromosome | RBS | 585010 | 5 | - | 0.4 | |
ddlA | BPEN_490 | D-alanine:D-alanine ligase A | chromosome | CDS | 583897 | 1107 | - | 0.30804 |
deaD | BPEN_113 | chromosome | RBS | 133026 | 5 | + | 0.4 | |
deaD | BPEN_113 | cold-shock DeaD box ATP-dependent RNA helicase | chromosome | CDS | 133041 | 1710 | + | 0.31462 |
def | BPEN_226 | polypeptide deformylase | chromosome | CDS | 257858 | 522 | - | 0.250958 |
def | BPEN_226 | chromosome | RBS | 258470 | 5 | - | 0.2 | |
degQ | BPEN_048 | serine protease | chromosome | CDS | 58826 | 1374 | - | 0.350801 |
degQ | BPEN_048 | chromosome | RBS | 60255 | 5 | - | 0.2 | |
dfp | BPEN_637 | 4'-phosphopantothenoylcysteine decarboxylase | chromosome | CDS | 760593 | 1209 | + | 0.329198 |
dksA | BPEN_154 | chromosome | RBS | 191015 | 5 | + | 0.6 | |
dksA | BPEN_154 | dosage-dependent dnaK suppressor protein | chromosome | CDS | 191027 | 465 | + | 0.309677 |
dnaB | BPEN_027 | chromosome | misc_feature | 32292 | 5 | + | 0.6 | |
dnaB | BPEN_027 | chromosome | misc_feature | 32302 | 1 | + | ||
dnaB | BPEN_027 | replicative DNA helicase | chromosome | CDS | 32173 | 1416 | + | 0.336864 |
dnaE | BPEN_294 | DNA polymerase III, alpha chain | chromosome | CDS | 340151 | 3492 | + | 0.305269 |
dnaE | BPEN_294 | chromosome | RBS | 340093 | 5 | + | 0.4 | |
dnaG | BPEN_058 | DNA primase | chromosome | CDS | 69956 | 1746 | - | 0.290378 |
dnaJ | BPEN_119 | DnaJ | chromosome | CDS | 143420 | 1128 | + | 0.373227 |
dnaJ | BPEN_119 | chromosome | RBS | 143323 | 5 | + | 0.6 | |
dnaK | BPEN_118 | chromosome | RBS | 141370 | 5 | + | 0.6 | |
dnaK | BPEN_118 | DnaK | chromosome | CDS | 141383 | 1914 | + | 0.354754 |
dnaN | BPEN_015 | DNA polymerase III, beta-subunit | chromosome | CDS | 15161 | 1104 | + | 0.306159 |
dnaQ | BPEN_232 | DNA polymerase III, epsilon subunit | chromosome | CDS | 262500 | 750 | + | 0.290667 |
dnaQ | BPEN_232 | chromosome | RBS | 262447 | 5 | + | 0.4 | |
dnaX | BPEN_309 | chromosome | RBS | 364525 | 5 | + | 0.4 | |
dnaX | BPEN_309 | DNA polymerase III, tau and gamma subunits | chromosome | CDS | 364540 | 2097 | + | 0.279447 |
dsbA | BPEN_646 | periplasmic protein disulfide isomerase I, disulfide bond formation | chromosome | CDS | 772648 | 630 | - | 0.271429 |
dsbA | BPEN_646 | chromosome | RBS | 773284 | 5 | - | 0.6 | |
dsbB | BPEN_452 | chromosome | RBS | 538345 | 5 | + | 0.4 | |
dsbB | BPEN_452 | disulfide bond formation protein B | chromosome | CDS | 538357 | 525 | + | 0.306667 |
dut | BPEN_638 | deoxyuridine 5'-triphosphate nucleotidohydrolase | chromosome | CDS | 761788 | 450 | + | 0.328889 |
dut | BPEN_638 | chromosome | RBS | 761711 | 5 | + | 0.4 | |
dxr | BPEN_283 | chromosome | RBS | 328432 | 5 | + | 0.4 | |
dxr | BPEN_283 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | chromosome | CDS | 328454 | 1194 | + | 0.346734 |
dxs | BPEN_244 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 274265 | 1875 | - | 0.343467 |
dxs | BPEN_244 | chromosome | RBS | 276234 | 5 | - | 0.2 | |
eaeH | BPEN_385 | chromosome | RBS | 452031 | 5 | + | ||
eaeH | BPEN_385 | putative adhesin | chromosome | CDS | 452045 | 2010 | + | 0.291045 |
ecfE | BPEN_286 | hypothetical protein | chromosome | CDS | 331484 | 1374 | + | 0.311499 |
ecfE | BPEN_286 | chromosome | RBS | 331468 | 5 | + | 0.2 | |
efp | BPEN_074 | chromosome | RBS | 87496 | 5 | + | 0.2 | |
efp | BPEN_074 | elongation factor P | chromosome | CDS | 87508 | 567 | + | 0.319224 |
emrE | BPEN_570 | chromosome | RBS | 678673 | 5 | + | 0.2 | |
emrE | BPEN_570 | auxillary multidrug transport protein (SMR family) | chromosome | CDS | 678687 | 330 | + | 0.278788 |
emtA | BPEN_402 | membrane-bound lytic murein transglycosylase E | chromosome | CDS | 477175 | 645 | - | 0.296124 |
emtA | BPEN_402 | chromosome | RBS | 477885 | 5 | - | 0.4 | |
engA | BPEN_549 | putative GTP-binding protein | chromosome | CDS | 656296 | 1416 | - | 0.282486 |
engA | BPEN_549 | chromosome | RBS | 657722 | 5 | - | 0.6 | |
eno | BPEN_162 | enolase | chromosome | CDS | 206853 | 1299 | + | 0.330254 |
eno | BPEN_162 | chromosome | RBS | 206842 | 5 | + | 0.4 | |
fabA | BPEN_432 | chromosome | RBS | 507821 | 5 | + | 0.4 | |
fabA | BPEN_432 | 3-hydroxydecanoyl-ACP dehydratase | chromosome | CDS | 507833 | 519 | + | 0.32948 |
fabB | BPEN_514 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 615721 | 1215 | - | 0.364609 |
fabD | BPEN_417 | malonyl CoA-acyl carrier protein transacylase | chromosome | CDS | 492744 | 942 | - | 0.367304 |
fabD | BPEN_417 | chromosome | RBS | 493697 | 5 | - | 0.4 | |
fabG | BPEN_416 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 491980 | 735 | - | 0.334694 |
fabG | BPEN_416 | chromosome | RBS | 492725 | 5 | - | 0.6 | |
fabH | BPEN_418 | chromosome | RBS | 494725 | 5 | - | 0.8 | |
fabH | BPEN_418 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 493709 | 954 | - | 0.372117 |
fabI | BPEN_436 | enoyl-[acyl-carrier-protein] reductase (NADH) | chromosome | CDS | 512610 | 789 | - | 0.34474 |
fabI | BPEN_436 | chromosome | RBS | 513407 | 5 | - | 0.6 | |
fabZ | BPEN_290 | chromosome | RBS | 337026 | 5 | + | 0.4 | |
fabZ | BPEN_290 | (3R)-hydroxymyristoyl ACP dehydratase | chromosome | CDS | 337040 | 456 | + | 0.364035 |
fbaA | BPEN_262 | chromosome | RBS | 298335 | 5 | + | 0.4 | |
fbaA | BPEN_262 | fructose-bisphosphate aldolase | chromosome | CDS | 298347 | 1083 | + | 0.303786 |
ffh | BPEN_178 | 4.5S-RNP protein | chromosome | CDS | 225699 | 1362 | + | 0.285609 |
ffh | BPEN_178 | chromosome | RBS | 225686 | 5 | + | 0.4 | |
fldA | BPEN_333 | chromosome | RBS | 394652 | 5 | - | 0.4 | |
fldA | BPEN_333 | flavodoxin | chromosome | CDS | 394115 | 528 | - | 0.318182 |
fmt | BPEN_225 | chromosome | RBS | 257909 | 5 | - | 0.2 | |
fmt | BPEN_225 | methionyl-tRNA formyltransferase | chromosome | CDS | 256879 | 969 | - | 0.335397 |
folA | BPEN_128 | chromosome | RBS | 156221 | 5 | + | 0.2 | |
folA | BPEN_128 | dihydrofolate reductase type I | chromosome | CDS | 156320 | 495 | + | 0.274747 |
folB | BPEN_062 | chromosome | RBS | 73983 | 5 | + | 0.2 | |
folB | BPEN_062 | dihydroneopterin aldolase, also has dihydroneopterin triphosphate | chromosome | CDS | 73996 | 384 | + | 0.286458 |
folC | BPEN_510 | chromosome | RBS | 611804 | 5 | - | 0.2 | |
folC | BPEN_510 | dihydrofolate synthase | chromosome | CDS | 610496 | 1275 | - | 0.331765 |
folD | BPEN_313 | chromosome | RBS | 372272 | 5 | - | 0.4 | |
folD | BPEN_313 | 5,10-methylene-tetrahydrofolate cyclohydrolase | chromosome | CDS | 371401 | 861 | - | 0.329849 |
folE | BPEN_487 | GTP cyclohydrolase I | chromosome | CDS | 581657 | 666 | - | 0.304805 |
folE | BPEN_487 | chromosome | RBS | 582328 | 5 | - | 0.2 | |
folK | BPEN_155 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase | chromosome | CDS | 191738 | 495 | + | 0.341414 |
folK | BPEN_155 | chromosome | RBS | 191697 | 5 | + | 0.8 | |
folP | BPEN_102 | 7,8-dihydropteroate synthase | chromosome | CDS | 120501 | 840 | + | 0.352381 |
fpr | BPEN_622 | ferredoxin-NADP reductase | chromosome | CDS | 744760 | 750 | + | 0.294667 |
fpr | BPEN_622 | chromosome | RBS | 744747 | 5 | + | 0.8 | |
frr | BPEN_282 | ribosome recycling factor | chromosome | CDS | 327793 | 567 | + | 0.271605 |
frr | BPEN_282 | chromosome | RBS | 327782 | 5 | + | 0.4 | |
ftsA | BPEN_149 | cell division protein | chromosome | CDS | 182506 | 1257 | + | 0.347653 |
ftsA | BPEN_149 | chromosome | RBS | 182433 | 5 | + | 0.6 | |
ftsI | BPEN_140 | division-specific transpeptidase | chromosome | CDS | 170769 | 1695 | + | 0.341003 |
ftsI | BPEN_140 | chromosome | RBS | 170701 | 5 | + | 0.4 | |
ftsK | BPEN_397 | chromosome | RBS | 470438 | 5 | - | 0.4 | |
ftsK | BPEN_397 | cell division protein | chromosome | CDS | 468047 | 2382 | - | 0.289673 |
ftsL | BPEN_139 | cell division protein | chromosome | CDS | 170370 | 315 | + | 0.292064 |
ftsL | BPEN_139 | chromosome | RBS | 170277 | 5 | + | 0.4 | |
ftsQ | BPEN_148 | cell division protein | chromosome | CDS | 181677 | 795 | + | 0.300629 |
ftsW | BPEN_145 | chromosome | RBS | 177768 | 5 | + | 0.2 | |
ftsW | BPEN_145 | cell division protein | chromosome | CDS | 177780 | 1197 | + | 0.307435 |
ftsY | BPEN_654 | cell division protein | chromosome | CDS | 785572 | 927 | - | 0.289105 |
ftsY | BPEN_654 | chromosome | RBS | 786509 | 5 | - | 0.4 | |
ftsZ | BPEN_150 | chromosome | RBS | 183827 | 5 | + | 0.6 | |
ftsZ | BPEN_150 | cell division protein FtsZ | chromosome | CDS | 183838 | 1167 | + | 0.374464 |
fumC | BPEN_384 | fumarase | chromosome | CDS | 450402 | 1401 | - | 0.349036 |
fumC | BPEN_384 | chromosome | RBS | 451811 | 5 | - | 0.6 | |
fusA | BPEN_585 | chromosome | RBS | 704175 | 5 | - | 0.4 | |
fusA | BPEN_585 | elongation factor G | chromosome | CDS | 702056 | 2115 | - | 0.365012 |
gapA | BPEN_451 | glyceraldehyde 3-phosphate dehydrogenase A | chromosome | CDS | 536840 | 999 | + | 0.334334 |
gapA | BPEN_451 | chromosome | RBS | 536824 | 5 | + | 0.6 | |
gcp | BPEN_060 | chromosome | RBS | 72228 | 5 | + | 0.6 | |
gcp | BPEN_060 | putative O-sialoglycoprotein endopeptidase | chromosome | CDS | 72239 | 1026 | + | 0.368421 |
gidA | BPEN_001 | glucose-inhibited division protein A | chromosome | CDS | 1 | 1899 | + | 0.347551 |
glmU | BPEN_010 | N-acetyl glucosamine-1-phosphate uridyltransferase | chromosome | CDS | 9294 | 1389 | + | 0.329734 |
glnA | BPEN_643 | chromosome | RBS | 767268 | 5 | + | 0.6 | |
glnA | BPEN_643 | glutamine synthetase | chromosome | CDS | 767280 | 1425 | + | 0.329825 |
glnS | BPEN_332 | glutaminyl-tRNA synthetase | chromosome | CDS | 392299 | 1659 | + | 0.312839 |
glnS | BPEN_332 | chromosome | RBS | 392288 | 5 | + | 0.4 | |
gloB | BPEN_230 | probable hydroxyacylglutathione hydrolase | chromosome | CDS | 260930 | 756 | - | 0.300265 |
gloB | BPEN_230 | chromosome | RBS | 261691 | 5 | - | 0.4 | |
gltP | BPEN_030 | chromosome | RBS | 37394 | 5 | + | 0.8 | |
gltP | BPEN_030 | glutamate:aspartate symporter (DAACS family) | chromosome | CDS | 37404 | 1290 | + | 0.331008 |
gltX | BPEN_521 | chromosome | RBS | 625182 | 5 | - | 0.4 | |
gltX | BPEN_521 | glutamate tRNA synthetase, catalytic subunit | chromosome | CDS | 623765 | 1407 | - | 0.307747 |
glyA | BPEN_556 | chromosome | RBS | 667151 | 5 | - | 0.4 | |
glyA | BPEN_556 | serine hydroxymethyltransferase | chromosome | CDS | 665893 | 1251 | - | 0.335731 |
glyQ | BPEN_019 | chromosome | RBS | 21203 | 5 | + | 0.2 | |
glyQ | BPEN_019 | glycine-tRNA synthetase, alpha subunit | chromosome | CDS | 21218 | 915 | + | 0.311475 |
glyS | BPEN_020 | glycine-tRNA synthetase, beta subunit | chromosome | CDS | 22156 | 2088 | + | 0.291667 |
glyS | BPEN_020 | chromosome | RBS | 22142 | 5 | + | 0.4 | |
gmhA | BPEN_233 | phosphoheptose isomerase | chromosome | CDS | 263467 | 588 | + | 0.304422 |
gmhA | BPEN_233 | chromosome | RBS | 263457 | 5 | + | 0.6 | |
gmhB | BPEN_298 | chromosome | RBS | 348613 | 5 | + | 0.4 | |
gmhB | BPEN_298 | D,D-heptose 1,7-bisphosphate phosphatase | chromosome | CDS | 348625 | 585 | + | 0.295727 |
gmk | BPEN_641 | chromosome | RBS | 765513 | 5 | + | 0.2 | |
gmk | BPEN_641 | guanylate kinase | chromosome | CDS | 765594 | 639 | + | 0.303599 |
gnd | BPEN_485 | 6-phosphogluconate dehydrogenase | chromosome | CDS | 577078 | 1410 | - | 0.322695 |
gnd | BPEN_485 | chromosome | RBS | 578493 | 5 | - | 0.6 | |
gntY | BPEN_593 | chromosome | RBS | 713516 | 5 | + | 0.4 | |
gntY | BPEN_593 | membrane-bound protein in GNT I transport system | chromosome | CDS | 713530 | 591 | + | 0.343486 |
gpmA | BPEN_352 | chromosome | RBS | 417034 | 5 | + | 0.4 | |
gpmA | BPEN_352 | phosphoglycerate mutase 1 | chromosome | CDS | 417047 | 699 | + | 0.307582 |
gpsA | BPEN_626 | chromosome | RBS | 750262 | 5 | - | 0.2 | |
gpsA | BPEN_626 | glycerol-3-phosphate dehydrogenase | chromosome | CDS | 749172 | 1035 | - | 0.343961 |
greA | BPEN_099 | transcription elongation factor | chromosome | CDS | 116889 | 477 | + | 0.337526 |
groEL | BPEN_073 | chromosome | RBS | 85731 | 5 | + | 0.4 | |
groEL | BPEN_073 | GroEL | chromosome | CDS | 85742 | 1638 | + | 0.393773 |
groES | BPEN_072 | co-chaperonin GroES | chromosome | CDS | 85399 | 294 | + | 0.404762 |
groES | BPEN_072 | chromosome | RBS | 85388 | 5 | + | 0.8 | |
grpE | BPEN_564 | chromosome | RBS | 675470 | 5 | - | 0.6 | |
grpE | BPEN_564 | heat shock protein 24 | chromosome | CDS | 674875 | 588 | - | 0.278912 |
grxC | BPEN_628 | glutaredoxin 3 | chromosome | CDS | 750742 | 276 | - | 0.311594 |
grxC | BPEN_628 | chromosome | RBS | 751026 | 5 | - | 0.4 | |
guaA | BPEN_546 | GMP synthase (glutamine-hydrolyzing) | chromosome | CDS | 650857 | 1578 | - | 0.320025 |
guaA | BPEN_546 | chromosome | RBS | 652442 | 5 | - | 0.2 | |
guaB | BPEN_547 | chromosome | RBS | 654063 | 5 | - | 0.6 | |
guaB | BPEN_547 | inosine-5'-monophosphate dehydrogenase | chromosome | CDS | 652578 | 1470 | - | 0.393197 |
gutQ | BPEN_474 | putative phosphosugar binding protein | chromosome | CDS | 565638 | 978 | - | 0.377301 |
gutQ | BPEN_474 | chromosome | RBS | 566681 | 5 | - | 0.4 | |
gyrA | BPEN_492 | chromosome | RBS | 589457 | 5 | - | 0.4 | |
gyrA | BPEN_492 | DNA gyrase, subunit A | chromosome | CDS | 586917 | 2532 | - | 0.341627 |
gyrB | BPEN_016 | chromosome | RBS | 16563 | 5 | + | 0.4 | |
gyrB | BPEN_016 | DNA gyrase, subunit B | chromosome | CDS | 16575 | 2415 | + | 0.330849 |
hemC | BPEN_601 | chromosome | RBS | 723942 | 5 | + | 0.2 | |
hemC | BPEN_601 | porphobilinogen deaminase | chromosome | CDS | 723951 | 903 | + | 0.327796 |
hemD | BPEN_602 | chromosome | RBS | 724890 | 5 | + | ||
hemD | BPEN_602 | uroporphyrinogen-III synthetase | chromosome | CDS | 724900 | 750 | + | 0.313333 |
hemK | BPEN_360 | chromosome | RBS | 425037 | 5 | + | 0.2 | |
hemK | BPEN_360 | N5-glutamine methyltransferase | chromosome | CDS | 425049 | 837 | + | 0.314217 |
hflB | BPEN_101 | FtsH | chromosome | CDS | 118442 | 1929 | + | 0.378953 |
hflC | BPEN_085 | chromosome | RBS | 100541 | 5 | + | 0.8 | |
hflC | BPEN_085 | HflC | chromosome | CDS | 100556 | 1029 | + | 0.336249 |
hflK | BPEN_084 | HflK | chromosome | CDS | 99260 | 1296 | + | 0.330247 |
hflK | BPEN_084 | chromosome | RBS | 99251 | 5 | + | 0.4 | |
hflX | BPEN_083 | HflX | chromosome | CDS | 97918 | 1287 | + | 0.319347 |
hfq | BPEN_082 | chromosome | RBS | 97498 | 5 | + | 0.4 | |
hfq | BPEN_082 | host factor I | chromosome | CDS | 97510 | 246 | + | 0.321138 |
hisA | BPEN_482 | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide | chromosome | CDS | 574691 | 741 | + | 0.31444 |
hisB | BPEN_480 | imidazole glycerol-phosphate dehydratase/histidinol phosphatase | chromosome | CDS | 573031 | 1071 | + | 0.305322 |
hisB | BPEN_480 | chromosome | RBS | 573021 | 5 | + | 0.6 | |
hisB | BPEN_480 | chromosome | RBS | 574086 | 5 | + | 0.4 | |
hisC | BPEN_479 | chromosome | RBS | 571929 | 5 | + | 0.4 | |
hisC | BPEN_479 | histidinol-phosphate aminotransferase | chromosome | CDS | 571938 | 1077 | + | 0.321263 |
hisD | BPEN_478 | chromosome | RBS | 570576 | 5 | + | 0.6 | |
hisD | BPEN_478 | L-histidinal:NAD+ dehydrogenase | chromosome | CDS | 570629 | 1332 | + | 0.353604 |
hisF | BPEN_483 | chromosome | RBS | 575400 | 5 | + | 0.4 | |
hisF | BPEN_483 | imidazole glycerol phosphate synthase subunit HisF | chromosome | CDS | 575413 | 777 | + | 0.329472 |
hisG | BPEN_477 | ATP phosphoribosyltransferase | chromosome | CDS | 569725 | 900 | + | 0.352222 |
hisH | BPEN_481 | glutamine amidotransferase | chromosome | CDS | 574098 | 591 | + | 0.294416 |
hisI | BPEN_484 | phosphoribosyl-AMP cyclohydrolase | chromosome | CDS | 576183 | 642 | + | 0.306854 |
hisS | BPEN_550 | histidyl-tRNA synthetase | chromosome | CDS | 658032 | 1317 | - | 0.312073 |
hldD | BPEN_630 | ADP-L-Glycero-D-mannoheptose-6-epimerase | chromosome | CDS | 752038 | 963 | + | 0.286604 |
hldD | BPEN_630 | chromosome | RBS | 752028 | 5 | + | 0.6 | |
hldE | BPEN_065 | ADP-heptose synthase | chromosome | CDS | 77297 | 1434 | + | 0.340307 |
hlpA | BPEN_288 | histone-like protein | chromosome | CDS | 335405 | 501 | + | 0.315369 |
hlpA | BPEN_288 | chromosome | RBS | 335393 | 5 | + | 0.4 | |
hns | BPEN_448 | DNA-binding protein HLP-II (HU, BH2, HD, NS) | chromosome | CDS | 531205 | 411 | + | 0.323601 |
hns | BPEN_448 | chromosome | RBS | 531191 | 5 | + | 0.4 | |
holA | BPEN_319 | DNA polymerase III, delta subunit | chromosome | CDS | 378161 | 1029 | - | 0.258503 |
holB | BPEN_412 | chromosome | RBS | 489152 | 5 | - | 0.4 | |
holB | BPEN_412 | DNA polymerase III, delta prime subunit | chromosome | CDS | 488141 | 1002 | - | 0.294411 |
holC | BPEN_034 | DNA polymerase III, chi subunit | chromosome | CDS | 43659 | 453 | - | 0.300221 |
holC | BPEN_034 | chromosome | RBS | 44188 | 5 | - | 0.2 | |
holD | BPEN_114 | DNA polymerase III, psi subunit | chromosome | CDS | 134912 | 423 | + | 0.309693 |
holD | BPEN_114 | chromosome | RBS | 134902 | 5 | + | 0.2 | |
htpX | BPEN_463 | heat shock protein | chromosome | CDS | 550270 | 936 | - | 0.308761 |
htpX | BPEN_463 | chromosome | RBS | 551216 | 5 | - | 0.4 | |
ibpA | BPEN_017 | chromosome | RBS | 19189 | 5 | + | 0.6 | |
ibpA | BPEN_017 | heat shock protein A | chromosome | CDS | 19201 | 411 | + | 0.270073 |
ileS | BPEN_122 | chromosome | RBS | 146026 | 5 | + | 0.4 | |
ileS | BPEN_122 | isoleucyl-tRNA synthetase | chromosome | CDS | 146107 | 2829 | + | 0.323789 |
ilvA | BPEN_610 | threonine dehydratase | chromosome | CDS | 730628 | 1545 | - | 0.359871 |
ilvA | BPEN_610 | chromosome | RBS | 732183 | 5 | - | 0.4 | |
ilvC | BPEN_609 | ketol-acid reductoisomerase | chromosome | CDS | 729092 | 1476 | - | 0.317073 |
ilvC | BPEN_609 | chromosome | RBS | 730575 | 5 | - | 0.4 | |
ilvD | BPEN_611 | dihydroxy-acid dehydratase | chromosome | CDS | 732181 | 1851 | - | 0.36953 |
ilvD | BPEN_611 | chromosome | RBS | 734038 | 5 | - | 0.6 | |
ilvE | BPEN_612 | chromosome | RBS | 735033 | 5 | - | 0.4 | |
ilvE | BPEN_612 | branched-chain amino acid aminotransferase | chromosome | CDS | 734104 | 921 | - | 0.353963 |
ilvG | BPEN_614 | acetolactate synthase II large subunit | chromosome | CDS | 735323 | 1641 | - | 0.363803 |
ilvG | BPEN_614 | chromosome | RBS | 736970 | 5 | - | 0.4 | |
ilvM | BPEN_613 | chromosome | RBS | 735329 | 5 | - | 0.6 | |
ilvM | BPEN_613 | acetolactate synthase II, small subunit | chromosome | CDS | 735085 | 237 | - | 0.2827 |
imp | BPEN_133 | chromosome | RBS | 163714 | 5 | - | 0.4 | |
imp | BPEN_133 | organic solvent tolerance protein precursor | chromosome | CDS | 161321 | 2349 | - | 0.266071 |
infA | BPEN_399 | chromosome | RBS | 472500 | 5 | + | 0.4 | |
infA | BPEN_399 | translation initiation factor IF-1 | chromosome | CDS | 472511 | 219 | + | 0.342466 |
infB | BPEN_108 | translation initiation factor IF2-2 | chromosome | CDS | 125595 | 2676 | + | 0.341928 |
infB | BPEN_108 | chromosome | RBS | 125586 | 5 | + | 0.4 | |
infC | BPEN_363 | chromosome | RBS | 430451 | 5 | + | 0.4 | |
infC | BPEN_363 | translation initiation factor IF-3 | chromosome | CDS | 430465 | 540 | + | 0.333333 |
ispA | BPEN_245 | geranyltranstransferase | chromosome | CDS | 276175 | 921 | - | 0.34202 |
ispB | BPEN_095 | octaprenyl-diphosphate synthase | chromosome | CDS | 113396 | 972 | - | 0.338477 |
ispB | BPEN_095 | chromosome | RBS | 114442 | 5 | - | 0.4 | |
ispD | BPEN_171 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase | chromosome | CDS | 218487 | 708 | + | 0.329096 |
ispE | BPEN_357 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | chromosome | CDS | 421786 | 888 | - | 0.329955 |
ispE | BPEN_357 | chromosome | RBS | 422680 | 5 | - | 0.4 | |
ispF | BPEN_172 | chromosome | RBS | 219197 | 5 | + | 0.4 | |
ispF | BPEN_172 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | chromosome | CDS | 219209 | 474 | + | 0.367089 |
ispG | BPEN_551 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | chromosome | CDS | 659362 | 1131 | - | 0.345712 |
ispG | BPEN_551 | chromosome | RBS | 660498 | 5 | - | 0.8 | |
ispH | BPEN_124 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein | chromosome | CDS | 149587 | 936 | + | 0.338675 |
kdsA | BPEN_361 | 3-deoxy-D-manno-octulosonic acid 8-P synthetase | chromosome | CDS | 426212 | 834 | + | 0.339329 |
kdsB | BPEN_387 | chromosome | RBS | 455915 | 5 | - | 0.4 | |
kdsB | BPEN_387 | 3-deoxy-manno-octulosonate cytidylyltransferase | chromosome | CDS | 455118 | 789 | - | 0.342205 |
kdtA | BPEN_633 | 3-deoxy-D-manno-octulosonic-acid transferase | chromosome | CDS | 756944 | 1284 | + | 0.325545 |
kdtA | BPEN_633 | chromosome | RBS | 756934 | 5 | + | 0.4 | |
ksgA | BPEN_130 | dimethyladenosine transferase | chromosome | CDS | 158188 | 804 | - | 0.282338 |
ksgA | BPEN_130 | chromosome | RBS | 159055 | 5 | - | 0.4 | |
lepA | BPEN_562 | GTP-binding protein LepA | chromosome | CDS | 671642 | 1803 | - | 0.311148 |
lepB | BPEN_561 | chromosome | RBS | 671633 | 5 | - | 0.4 | |
lepB | BPEN_561 | signal peptidase I | chromosome | CDS | 670628 | 996 | - | 0.289157 |
leuA | BPEN_137 | 2-isopropylmalate synthase | chromosome | CDS | 167418 | 1554 | - | 0.33462 |
leuB | BPEN_136 | chromosome | RBS | 167408 | 5 | - | 0.4 | |
leuB | BPEN_136 | 3-isopropylmalate dehydrogenase | chromosome | CDS | 166294 | 1101 | - | 0.319709 |
leuC | BPEN_135 | isopropylmalate isomerase large subunit | chromosome | CDS | 164892 | 1401 | - | 0.361171 |
leuC | BPEN_135 | chromosome | RBS | 166302 | 5 | - | 0.4 | |
leuD | BPEN_134 | 3-isopropylmalate dehydratase subunit 1 | chromosome | CDS | 164259 | 609 | - | 0.259442 |
leuD | BPEN_134 | chromosome | RBS | 164880 | 5 | - | 0.6 | |
leuS | BPEN_321 | leucyl-tRNA synthetase | chromosome | CDS | 379823 | 2619 | - | 0.323788 |
leuS | BPEN_321 | chromosome | RBS | 382449 | 5 | - | 0.4 | |
lgt | BPEN_273 | chromosome | RBS | 311974 | 5 | + | 0.2 | |
lgt | BPEN_273 | prolipoprotein diacylglyceryl transferase | chromosome | CDS | 311989 | 846 | + | 0.34279 |
ligA | BPEN_524 | chromosome | RBS | 627581 | 5 | - | 0.6 | |
ligA | BPEN_524 | DNA ligase | chromosome | CDS | 625784 | 1788 | - | 0.308166 |
lnt | BPEN_322 | chromosome | RBS | 384264 | 5 | - | 0.2 | |
lnt | BPEN_322 | apolipoprotein N-acyltransferase | chromosome | CDS | 382717 | 1533 | - | 0.310502 |
lolA | BPEN_396 | chromosome | RBS | 467944 | 5 | - | 0.6 | |
lolA | BPEN_396 | LolA | chromosome | CDS | 467312 | 618 | - | 0.257282 |
lolB | BPEN_358 | outer membrane lipoprotein precursor | chromosome | CDS | 422670 | 618 | - | 0.257282 |
lolC | BPEN_408 | transport protein of outer membrane lipoproteins (ABC superfamily, membrane) | chromosome | CDS | 484541 | 1206 | - | 0.305141 |
lolD | BPEN_407 | transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) | chromosome | CDS | 483847 | 702 | - | 0.311966 |
lolD | BPEN_407 | chromosome | RBS | 484614 | 5 | - | 0.2 | |
lolE | BPEN_406 | transport protein of outer membrane lipoproteins (ABC superfamily, membrane) | chromosome | CDS | 482601 | 1236 | - | 0.267799 |
lon | BPEN_307 | DNA-binding ATP-dependent protease La | chromosome | CDS | 359892 | 2364 | + | 0.346447 |
lon | BPEN_307 | chromosome | RBS | 359877 | 5 | + | 0.4 | |
lpdA | BPEN_156 | chromosome | RBS | 195415 | 5 | - | 0.6 | |
lpdA | BPEN_156 | dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes | chromosome | CDS | 193981 | 1425 | - | 0.322105 |
lplA | BPEN_368 | chromosome | RBS | 435863 | 5 | + | 0.6 | |
lplA | BPEN_368 | lipoate-protein ligase A | chromosome | CDS | 435873 | 1020 | + | 0.335294 |
lpp | BPEN_375 | chromosome | RBS | 443370 | 5 | - | 0.8 | |
lpp | BPEN_375 | murein lipoprotein | chromosome | CDS | 443123 | 237 | - | 0.312236 |
lpxA | BPEN_291 | chromosome | RBS | 337485 | 5 | + | 0.4 | |
lpxA | BPEN_291 | UDP-N-acetylglucosamine acyltransferase | chromosome | CDS | 337500 | 789 | + | 0.358682 |
lpxB | BPEN_292 | lipid-A-disaccharide synthase | chromosome | CDS | 338291 | 1164 | + | 0.315292 |
lpxC | BPEN_151 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | chromosome | CDS | 185108 | 894 | + | 0.328859 |
lpxC | BPEN_151 | chromosome | RBS | 185095 | 5 | + | 0.4 | |
lpxD | BPEN_289 | chromosome | RBS | 335899 | 5 | + | 0.4 | |
lpxD | BPEN_289 | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase | chromosome | CDS | 335909 | 1032 | + | 0.346899 |
lpxH | BPEN_311 | chromosome | RBS | 369565 | 5 | - | 0.4 | |
lpxH | BPEN_311 | UDP-2,3-diacylglucosamine hydrolase | chromosome | CDS | 368807 | 753 | - | 0.266932 |
lpxK | BPEN_389 | chromosome | RBS | 457384 | 5 | - | 0.4 | |
lpxK | BPEN_389 | tetraacyldisaccharide 4'-kinase | chromosome | CDS | 456296 | 1014 | - | 0.338264 |
lpxL | BPEN_423 | lipid A biosynthesis lauroyl acyltransferase | chromosome | CDS | 501333 | 924 | + | 0.341991 |
lpxL | BPEN_423 | chromosome | RBS | 501317 | 5 | + | 0.2 | |
lspA | BPEN_123 | prolipoprotein signal peptidase | chromosome | CDS | 148935 | 498 | + | 0.263052 |
lysA | BPEN_271 | diaminopimelate decarboxylase | chromosome | CDS | 309411 | 1290 | + | 0.318605 |
lysA | BPEN_271 | chromosome | RBS | 309400 | 5 | + | 0.6 | |
lysS | BPEN_270 | chromosome | RBS | 307690 | 5 | + | 0.6 | |
lysS | BPEN_270 | lysyl-tRNA synthetase | chromosome | CDS | 307702 | 1530 | + | 0.303268 |
manX | BPEN_459 | PTS family enzyme IIA/enzyme IIB, mannose-specific | chromosome | CDS | 546359 | 984 | + | 0.319106 |
manY | BPEN_460 | chromosome | RBS | 547408 | 5 | + | 0.4 | |
manY | BPEN_460 | PTS family enzyme IIC, mannose-specific | chromosome | CDS | 547418 | 810 | + | 0.366667 |
manZ | BPEN_461 | PTS family enzyme IID, mannose-specific | chromosome | CDS | 548254 | 867 | + | 0.337947 |
map | BPEN_278 | methionine aminopeptidase | chromosome | CDS | 324077 | 783 | - | 0.325671 |
metA | BPEN_657 | homoserine O-succinyltransferase | chromosome | CDS | 789711 | 915 | - | 0.302732 |
metB | BPEN_620 | cystathionine gamma-synthase | chromosome | CDS | 741619 | 1149 | - | 0.330722 |
metB | BPEN_620 | chromosome | RBS | 742849 | 5 | - | 0.2 | |
metC | BPEN_069 | chromosome | RBS | 82682 | 5 | - | 0.2 | |
metC | BPEN_069 | beta-cystathionase | chromosome | CDS | 81475 | 1188 | - | 0.334175 |
metE | BPEN_652 | chromosome | RBS | 783819 | 5 | - | 0.6 | |
metE | BPEN_652 | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | chromosome | CDS | 781518 | 2295 | - | 0.312854 |
metF | BPEN_619 | 5,10-methylenetetrahydrofolate reductase | chromosome | CDS | 740314 | 894 | - | 0.293065 |
metG | BPEN_486 | methionyl-tRNA synthetase | chromosome | CDS | 579039 | 1668 | + | 0.318345 |
metK | BPEN_259 | chromosome | RBS | 294917 | 5 | - | 0.4 | |
metK | BPEN_259 | S-adenosylmethionine synthetase | chromosome | CDS | 293740 | 1170 | - | 0.364957 |
miaA | BPEN_081 | chromosome | RBS | 96464 | 5 | + | 0.8 | |
miaA | BPEN_081 | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase | chromosome | CDS | 96505 | 915 | + | 0.31694 |
minC | BPEN_453 | MinC | chromosome | CDS | 539585 | 681 | + | 0.324523 |
minD | BPEN_454 | MinD | chromosome | CDS | 540291 | 813 | + | 0.343173 |
minD | BPEN_454 | chromosome | RBS | 540280 | 5 | + | 0.4 | |
minE | BPEN_455 | chromosome | RBS | 541095 | 5 | + | 0.4 | |
minE | BPEN_455 | cell division topological specificity factor | chromosome | CDS | 541111 | 264 | + | 0.238636 |
mntH | BPEN_518 | chromosome | RBS | 621786 | 5 | - | 0.4 | |
mntH | BPEN_518 | putative manganese transport protein MntH | chromosome | CDS | 620543 | 1236 | - | 0.335761 |
mntR | BPEN_403 | chromosome | RBS | 478750 | 5 | - | 0.4 | |
mntR | BPEN_403 | transcriptional regulator of mntH, Mn(2+) responsive | chromosome | CDS | 478280 | 462 | - | 0.322511 |
mqo | BPEN_548 | malate:quinone oxidoreductase | chromosome | CDS | 654656 | 1548 | + | 0.335271 |
mqo | BPEN_548 | chromosome | RBS | 654644 | 5 | + | 0.4 | |
mraW | BPEN_138 | S-adenosyl-dependent methyl transferase | chromosome | CDS | 169378 | 990 | + | 0.309091 |
mraW | BPEN_138 | chromosome | RBS | 169306 | 5 | + | 0.4 | |
mraY | BPEN_143 | phospho-N-acetylmuramoyl-pentapeptidetransferase | chromosome | CDS | 175365 | 1089 | + | 0.310376 |
mraY | BPEN_143 | chromosome | RBS | 175355 | 5 | + | 0.2 | |
mrcB | BPEN_159 | chromosome | RBS | 201567 | 5 | + | 0.4 | |
mrcB | BPEN_159 | penicillin-binding protein 1b | chromosome | CDS | 201636 | 2337 | + | 0.315789 |
mrdA | BPEN_317 | cell elongation-specific transpeptidase of penicillin-binding protein 2 | chromosome | CDS | 375262 | 1851 | - | 0.335494 |
mrdA | BPEN_317 | chromosome | RBS | 377207 | 5 | - | 0.6 | |
mrdB | BPEN_316 | rod shape-determining protein | chromosome | CDS | 374085 | 1113 | - | 0.320755 |
mreB | BPEN_302 | rod shape-determining protein | chromosome | CDS | 352331 | 1044 | + | 0.404215 |
mreB | BPEN_302 | chromosome | RBS | 352273 | 5 | + | 0.4 | |
mreC | BPEN_303 | rod shape-determining protein | chromosome | CDS | 353495 | 816 | + | 0.291667 |
mreD | BPEN_304 | rod shape-determining protein | chromosome | CDS | 354421 | 480 | + | 0.291667 |
mreD | BPEN_304 | chromosome | RBS | 354359 | 5 | + | 0.2 | |
mrsA | BPEN_103 | chromosome | RBS | 121282 | 5 | + | 0.4 | |
mrsA | BPEN_103 | PGM/PMM-family protein | chromosome | CDS | 121354 | 1362 | + | 0.359765 |
msbA | BPEN_390 | lipid transport protein | chromosome | CDS | 457309 | 1755 | - | 0.335613 |
msbA | BPEN_390 | chromosome | RBS | 459069 | 5 | - | 0.6 | |
murA | BPEN_047 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | chromosome | CDS | 57272 | 1266 | + | 0.368878 |
murA | BPEN_047 | chromosome | RBS | 57185 | 5 | + | 0.4 | |
murB | BPEN_189 | chromosome | RBS | 238162 | 5 | + | 0.4 | |
murB | BPEN_189 | UDP-N-acetylenolpyruvoylglucosamine reductase | chromosome | CDS | 238230 | 1038 | + | 0.293834 |
murC | BPEN_147 | UDP-N-acetyl-muramate:alanine ligase | chromosome | CDS | 180099 | 1443 | + | 0.340263 |
murD | BPEN_144 | chromosome | RBS | 176423 | 5 | + | 0.4 | |
murD | BPEN_144 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | chromosome | CDS | 176458 | 1323 | + | 0.321995 |
murE | BPEN_141 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase | chromosome | CDS | 172499 | 1512 | + | 0.326058 |
murE | BPEN_141 | chromosome | RBS | 172486 | 5 | + | 0.4 | |
murF | BPEN_142 | D-alanine:D-alanine-adding enzyme | chromosome | CDS | 174007 | 1374 | + | 0.302766 |
murF | BPEN_142 | chromosome | RBS | 173974 | 5 | + | 0.4 | |
murG | BPEN_146 | chromosome | misc_feature | 178983 | 5 | + | 0.2 | |
murG | BPEN_146 | chromosome | misc_feature | 178994 | 1 | + | ||
murG | BPEN_146 | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | chromosome | CDS | 178973 | 1068 | + | 0.35206 |
murI | BPEN_618 | chromosome | RBS | 739878 | 5 | - | ||
murI | BPEN_618 | glutamate racemase | chromosome | CDS | 739039 | 834 | - | 0.296163 |
mutY | BPEN_256 | adenine DNA glycosylase | chromosome | CDS | 289949 | 1050 | - | 0.297143 |
mviN | BPEN_469 | putative virulence factor | chromosome | CDS | 560978 | 1548 | - | 0.290052 |
nagA | BPEN_330 | chromosome | RBS | 390661 | 5 | - | 0.4 | |
nagA | BPEN_330 | N-acetylglucosamine-6-phosphate deacetylase | chromosome | CDS | 389409 | 1161 | - | 0.326443 |
nagB | BPEN_331 | chromosome | RBS | 391390 | 5 | - | 0.4 | |
nagB | BPEN_331 | glucosamine-6-phosphate deaminase | chromosome | CDS | 390580 | 804 | - | 0.312189 |
ndk | BPEN_553 | 3'-phosphodiesterase | chromosome | CDS | 662040 | 411 | - | 0.318735 |
ndk | BPEN_553 | chromosome | RBS | 662456 | 5 | - | 0.6 | |
nifS | BPEN_554 | chromosome | RBS | 664167 | 5 | - | 0.6 | |
nifS | BPEN_554 | putative L-cysteine desulfurase | chromosome | CDS | 662989 | 1170 | - | 0.345299 |
nlpD | BPEN_173 | chromosome | RBS | 220312 | 5 | + | 0.6 | |
nlpD | BPEN_173 | lipoprotein NlpD precursor | chromosome | CDS | 220332 | 954 | + | 0.287212 |
nrdA | BPEN_494 | ribonucleotide-diphosphate reductase alpha subunit | chromosome | CDS | 590814 | 2283 | + | 0.330267 |
nrdA | BPEN_494 | chromosome | RBS | 590734 | 5 | + | 0.6 | |
nrdB | BPEN_495 | chromosome | RBS | 593143 | 5 | + | 0.4 | |
nrdB | BPEN_495 | ribonucleotide-diphosphate reductase beta subunit | chromosome | CDS | 593153 | 1131 | + | 0.320955 |
nth | BPEN_383 | chromosome | RBS | 450373 | 5 | - | 0.4 | |
nth | BPEN_383 | endonuclease III | chromosome | CDS | 449664 | 642 | - | 0.313084 |
nuoA | BPEN_509 | NADH dehydrogenase I chain A | chromosome | CDS | 609391 | 441 | - | 0.285714 |
nuoA | BPEN_509 | chromosome | RBS | 609841 | 5 | - | 0.6 | |
nuoB | BPEN_508 | chromosome | RBS | 609391 | 5 | - | 0.6 | |
nuoB | BPEN_508 | NADH dehydrogenase beta subunit | chromosome | CDS | 608675 | 711 | - | 0.38256 |
nuoCD | BPEN_507 | chromosome | misc_feature | 608625 | 1 | - | ||
nuoCD | BPEN_507 | NADH dehydrogenase I chain C, D | chromosome | CDS | 606847 | 1791 | - | 0.3445 |
nuoCD | BPEN_507 | chromosome | misc_feature | 608631 | 5 | - | 0.6 | |
nuoE | BPEN_506 | ATP synthase subunit E | chromosome | CDS | 606312 | 522 | - | 0.323755 |
nuoE | BPEN_506 | chromosome | RBS | 606838 | 5 | - | 0.6 | |
nuoF | BPEN_505 | chromosome | RBS | 606323 | 5 | - | 0.6 | |
nuoF | BPEN_505 | NADH dehydrogenase I chain F | chromosome | CDS | 604984 | 1332 | - | 0.357357 |
nuoG | BPEN_504 | NADH dehydrogenase gamma subunit | chromosome | CDS | 602108 | 2760 | - | 0.337319 |
nuoH | BPEN_503 | NADH dehydrogenase subunit H | chromosome | CDS | 601137 | 972 | - | 0.332305 |
nuoH | BPEN_503 | chromosome | RBS | 602119 | 5 | - | 0.6 | |
nuoI | BPEN_502 | NADH dehydrogenase subunit I | chromosome | CDS | 600567 | 546 | - | 0.335165 |
nuoJ | BPEN_501 | NADH dehydrogenase I chain J | chromosome | CDS | 599982 | 552 | - | 0.282609 |
nuoJ | BPEN_501 | chromosome | RBS | 600540 | 5 | - | 0.6 | |
nuoK | BPEN_500 | chromosome | RBS | 600071 | 5 | - | 0.6 | |
nuoK | BPEN_500 | NADH dehydrogenase I chain K | chromosome | CDS | 599683 | 303 | - | 0.287129 |
nuoL | BPEN_499 | NADH dehydrogenase I chain L, membrane subunit | chromosome | CDS | 597800 | 1887 | - | 0.304187 |
nuoL | BPEN_499 | chromosome | RBS | 599695 | 5 | - | 0.6 | |
nuoM | BPEN_498 | NADH dehydrogenase I chain M, membrane subunit | chromosome | CDS | 596175 | 1542 | - | 0.32166 |
nuoM | BPEN_498 | chromosome | RBS | 597765 | 5 | - | 0.4 | |
nuoN | BPEN_497 | NADH dehydrogenase I chain N, membrane subunit | chromosome | CDS | 594648 | 1494 | - | 0.289157 |
nuoN | BPEN_497 | chromosome | RBS | 596153 | 5 | - | 0.4 | |
nupC | BPEN_519 | nucleoside transport protein (NUP family) | chromosome | CDS | 622114 | 1191 | + | 0.290512 |
nupC | BPEN_519 | chromosome | RBS | 622101 | 5 | + | 0.6 | |
nusA | BPEN_107 | transcription elongation factor NusA | chromosome | CDS | 124047 | 1518 | + | 0.332675 |
nusA | BPEN_107 | chromosome | RBS | 124034 | 5 | + | 0.4 | |
nusB | BPEN_242 | transcription antitermination protein NusB | chromosome | CDS | 273155 | 435 | + | 0.298851 |
nusB | BPEN_242 | chromosome | RBS | 273146 | 5 | + | 0.4 | |
nusG | BPEN_582 | transcription antitermination protein | chromosome | CDS | 699846 | 546 | - | 0.373626 |
nusG | BPEN_582 | chromosome | RBS | 700473 | 5 | - | 0.6 | |
omp | BPEN_491 | chromosome | RBS | 586222 | 5 | - | 0.6 | |
omp | BPEN_491 | outer membrane protein | chromosome | CDS | 585092 | 1122 | - | 0.328877 |
oprC | BPEN_400 | chromosome | misc_feature | 475037 | 5 | - | 0.4 | |
oprC | BPEN_400 | chromosome | misc_feature | 475029 | 1 | - | ||
oprC | BPEN_400 | OprC | chromosome | CDS | 472885 | 2157 | - | 0.320816 |
orn | BPEN_077 | oligoribonuclease | chromosome | CDS | 93133 | 564 | + | 0.326241 |
pabA | BPEN_588 | chromosome | RBS | 707661 | 5 | - | ||
pabA | BPEN_588 | aminodeoxychorismate synthase subunit II | chromosome | CDS | 707069 | 582 | - | 0.345361 |
pabB | BPEN_457 | aminodeoxychorismate synthase subunit I | chromosome | CDS | 542815 | 1389 | + | 0.311735 |
pabC | BPEN_414 | chromosome | RBS | 490987 | 5 | - | 0.4 | |
pabC | BPEN_414 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 490159 | 822 | - | 0.311436 |
pal | BPEN_349 | chromosome | RBS | 413360 | 5 | + | 0.4 | |
pal | BPEN_349 | Pal | chromosome | CDS | 413371 | 528 | + | 0.278409 |
pdxA | BPEN_131 | pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit, NAD-dependent dehydrogenase/carboxylase | chromosome | CDS | 158972 | 1020 | - | 0.322549 |
pdxB | BPEN_513 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 614374 | 1125 | - | 0.316444 |
pdxH | BPEN_381 | chromosome | RBS | 447400 | 5 | + | 0.4 | |
pdxH | BPEN_381 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 447480 | 651 | + | 0.308756 |
pdxJ | BPEN_559 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 668433 | 735 | - | 0.322449 |
pepA | BPEN_035 | cytosol aminopeptidase | chromosome | CDS | 44226 | 1512 | - | 0.319444 |
pepA | BPEN_035 | chromosome | RBS | 45743 | 5 | - | 0.4 | |
pfkA | BPEN_624 | 6-phosphofructokinase | chromosome | CDS | 746684 | 969 | - | 0.379773 |
pgi | BPEN_656 | chromosome | RBS | 789309 | 5 | - | 0.4 | |
pgi | BPEN_656 | glucose-6-phosphate isomerase | chromosome | CDS | 787575 | 1656 | - | 0.310386 |
pgk | BPEN_261 | phosphoglycerate kinase | chromosome | CDS | 297078 | 1185 | + | 0.3173 |
pgk | BPEN_261 | chromosome | RBS | 297066 | 5 | + | 0.4 | |
pgm | BPEN_335 | phosphoglucomutase | chromosome | CDS | 395951 | 1659 | + | 0.317661 |
pgm | BPEN_335 | chromosome | RBS | 395938 | 5 | + | 0.8 | |
pgpA | BPEN_243 | chromosome | RBS | 273664 | 5 | + | 0.4 | |
pgpA | BPEN_243 | phosphatidylglycerophosphatase A | chromosome | CDS | 273677 | 492 | + | 0.296748 |
pgsA | BPEN_427 | phosphotidylglycerophosphate synthetase | chromosome | CDS | 504315 | 552 | - | 0.356884 |
pheA | BPEN_185 | chromosome | misc_feature | 232965 | 5 | - | 0.4 | |
pheA | BPEN_185 | chromosome | misc_feature | 232969 | 1 | - | ||
pheA | BPEN_185 | chorismate mutase P | chromosome | CDS | 232079 | 891 | - | 0.290685 |
pheS | BPEN_366 | phenylalanine tRNA synthetase, alpha-subunit | chromosome | CDS | 431885 | 996 | + | 0.296185 |
pheS | BPEN_366 | chromosome | RBS | 431873 | 5 | + | 0.6 | |
pheT | BPEN_367 | phenylalanine tRNA synthetase, beta-subunit | chromosome | CDS | 432894 | 2394 | + | 0.294904 |
pheT | BPEN_367 | chromosome | RBS | 432885 | 5 | + | 0.4 | |
phoL | BPEN_325 | putative ATP-binding protein in pho regulon | chromosome | CDS | 385753 | 993 | - | 0.30715 |
phoL | BPEN_325 | chromosome | RBS | 386752 | 5 | - | 0.8 | |
pitA | BPEN_024 | chromosome | RBS | 29775 | 5 | - | 0.2 | |
pitA | BPEN_024 | low-affinity phosphate transport protein (PiT family) | chromosome | CDS | 28064 | 1623 | - | 0.320394 |
plsC | BPEN_068 | 1-acyl-glycerol-3-phosphate acyltransferase | chromosome | CDS | 80554 | 738 | + | 0.303523 |
plsC | BPEN_068 | chromosome | RBS | 80544 | 5 | + | 0.6 | |
plsX | BPEN_419 | fatty acid/phospholipid synthesis protein | chromosome | CDS | 494668 | 1029 | - | 0.371234 |
pmbA | BPEN_306 | PmbA | chromosome | CDS | 357217 | 1341 | + | 0.324385 |
pmbA | BPEN_306 | chromosome | RBS | 357206 | 5 | + | 0.6 | |
pnp | BPEN_112 | polynucleotide phosphorylase | chromosome | CDS | 130316 | 2100 | + | 0.338095 |
pnp | BPEN_112 | chromosome | RBS | 130305 | 5 | + | 0.4 | |
polA | BPEN_645 | DNA polymerase I | chromosome | CDS | 769643 | 2811 | - | 0.290644 |
ppa | BPEN_094 | inorganic pyrophosphatase | chromosome | CDS | 112666 | 534 | - | 0.297753 |
ppa | BPEN_094 | chromosome | RBS | 113206 | 5 | - | 0.6 | |
prfA | BPEN_359 | peptide chain release factor 1 (RF-1) | chromosome | CDS | 423967 | 1083 | + | 0.34349 |
prfA | BPEN_359 | chromosome | RBS | 423954 | 5 | + | 0.2 | |
prfB | BPEN_269 | peptide chain release factor 2 (RF-2) | chromosome | CDS | 306663 | 1047 | + | 0.315186 |
prfB | BPEN_269 | chromosome | RBS | 306582 | 5 | + | 0.4 | |
prlC | BPEN_023 | oligopeptidase A | chromosome | CDS | 25566 | 2073 | + | 0.310178 |
prlC | BPEN_023 | chromosome | RBS | 25554 | 5 | + | 0.4 | |
proS | BPEN_297 | prolyl-tRNA synthetase | chromosome | CDS | 346510 | 1746 | - | 0.310424 |
prsA | BPEN_356 | chromosome | RBS | 421713 | 5 | - | 0.4 | |
prsA | BPEN_356 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 420762 | 939 | - | 0.362087 |
psd | BPEN_076 | phosphatidylserine decarboxylase proenzyme | chromosome | CDS | 91537 | 888 | - | 0.338964 |
psd | BPEN_076 | chromosome | RBS | 92431 | 5 | - | 0.4 | |
pssA | BPEN_571 | chromosome | RBS | 679470 | 5 | + | 0.2 | |
pssA | BPEN_571 | phosphatidylserine synthase | chromosome | CDS | 679527 | 1377 | + | 0.283951 |
pth | BPEN_355 | peptidyl-tRNA hydrolase | chromosome | CDS | 419924 | 594 | - | 0.279461 |
pth | BPEN_355 | chromosome | RBS | 420527 | 5 | - | 0.6 | |
ptsH | BPEN_526 | chromosome | RBS | 629256 | 5 | + | 0.6 | |
ptsH | BPEN_526 | PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase | chromosome | CDS | 629267 | 258 | + | 0.321705 |
ptsI | BPEN_527 | chromosome | RBS | 629576 | 5 | + | 0.2 | |
ptsI | BPEN_527 | PTS family enzyme I and Hpr components, PEP-protein phosphotransferase | chromosome | CDS | 629590 | 1734 | + | 0.326413 |
purA | BPEN_086 | chromosome | RBS | 101731 | 5 | + | 0.8 | |
purA | BPEN_086 | adenylosuccinate synthetase | chromosome | CDS | 101746 | 1299 | + | 0.354119 |
purB | BPEN_405 | chromosome | RBS | 480975 | 5 | + | 0.4 | |
purB | BPEN_405 | adenylosuccinate lyase | chromosome | CDS | 480986 | 1383 | + | 0.301518 |
purH | BPEN_575 | chromosome | RBS | 686472 | 5 | + | 0.6 | |
purH | BPEN_575 | IMP cyclohydrolase | chromosome | CDS | 686483 | 1635 | + | 0.325994 |
pykA | BPEN_465 | chromosome | RBS | 553577 | 5 | + | 0.4 | |
pykA | BPEN_465 | pyruvate kinase A | chromosome | CDS | 553587 | 1449 | + | 0.343685 |
pyrG | BPEN_161 | chromosome | RBS | 205120 | 5 | + | 0.4 | |
pyrG | BPEN_161 | CTP synthetase | chromosome | CDS | 205130 | 1647 | + | 0.344262 |
pyrH | BPEN_281 | uridylate kinase | chromosome | CDS | 326982 | 726 | + | 0.355372 |
pyrH | BPEN_281 | chromosome | RBS | 326969 | 5 | + | 0.4 | |
rbfA | BPEN_109 | chromosome | RBS | 128348 | 5 | + | 0.6 | |
rbfA | BPEN_109 | 30S ribosome-binding factor | chromosome | CDS | 128361 | 360 | + | 0.291667 |
recB | BPEN_276 | exonuclease V | chromosome | CDS | 319015 | 3564 | - | 0.283389 |
recB | BPEN_276 | chromosome | RBS | 322594 | 5 | - | 0.2 | |
recC | BPEN_274 | exonuclease V, gamma chain | chromosome | CDS | 313298 | 3402 | + | 0.280717 |
recC | BPEN_274 | chromosome | RBS | 313234 | 5 | + | 0.4 | |
recD | BPEN_275 | chromosome | RBS | 318736 | 5 | - | 0.2 | |
recD | BPEN_275 | exonuclease V, alpha chain | chromosome | CDS | 316824 | 1908 | - | 0.29979 |
rfaC | BPEN_632 | chromosome | RBS | 754069 | 5 | + | 0.2 | |
rfaC | BPEN_632 | ADP-heptose; LPS heptosyl transferase I | chromosome | CDS | 754081 | 972 | + | 0.309671 |
rfaF | BPEN_631 | ADP-heptose; LPS heptosyl transferase II | chromosome | CDS | 753019 | 1041 | + | 0.323727 |
rho | BPEN_607 | transcription termination factor Rho | chromosome | CDS | 726829 | 1260 | - | 0.353175 |
rho | BPEN_607 | chromosome | RBS | 728169 | 5 | - | 0.4 | |
ribA | BPEN_437 | GTP cyclohydrolase II protein | chromosome | CDS | 515202 | 600 | + | 0.318333 |
ribA | BPEN_437 | chromosome | RBS | 515187 | 5 | + | 0.6 | |
ribB | BPEN_067 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 79574 | 645 | + | 0.375194 |
ribB | BPEN_067 | chromosome | RBS | 79560 | 5 | + | 0.4 | |
ribD | BPEN_240 | pyrimidine deaminase/reductase | chromosome | CDS | 271407 | 1140 | + | 0.365789 |
ribE | BPEN_377 | riboflavin synthase subunit alpha | chromosome | CDS | 444000 | 624 | + | 0.266026 |
ribE | BPEN_377 | chromosome | RBS | 443935 | 5 | + | 0.4 | |
ribF | BPEN_121 | bifunctional: flavokinase; FAD synthetase | chromosome | CDS | 145136 | 975 | + | 0.297436 |
ribF | BPEN_121 | chromosome | RBS | 145125 | 5 | + | 0.2 | |
ribH | BPEN_241 | 6,7-dimethyl-8-ribityllumazine synthase | chromosome | CDS | 272651 | 477 | + | 0.303983 |
ribH | BPEN_241 | chromosome | RBS | 272642 | 5 | + | 0.4 | |
rimM | BPEN_180 | chromosome | misc_feature | 227425 | 5 | + | 0.4 | |
rimM | BPEN_180 | 16S rRNA processing protein | chromosome | CDS | 227396 | 570 | + | 0.294737 |
rimM | BPEN_180 | chromosome | misc_feature | 227425 | 1 | + | ||
rlmB | BPEN_087 | probable tRNA/rRNA methyltransferase | chromosome | CDS | 103280 | 744 | + | 0.342742 |
rlmB | BPEN_087 | chromosome | RBS | 103270 | 5 | + | ||
rlpB | BPEN_320 | rare lipoprotein B precursor | chromosome | CDS | 379255 | 564 | - | 0.301418 |
rlpB | BPEN_320 | chromosome | RBS | 379906 | 5 | - | 0.8 | |
rluC | BPEN_421 | ribosomal large subunit (23S) pseudouridine synthase C | chromosome | CDS | 496794 | 1017 | - | 0.282203 |
rluD | BPEN_187 | chromosome | RBS | 233958 | 5 | + | 0.4 | |
rluD | BPEN_187 | pseudouridine synthase | chromosome | CDS | 234005 | 1032 | + | 0.312016 |
rmpH | BPEN_014 | 50S ribosomal subunit protein L34 | chromosome | CDS | 14666 | 153 | - | 0.392157 |
rmpH | BPEN_014 | chromosome | RBS | 14826 | 5 | - | 0.2 | |
rmpJ | BPEN_219 | chromosome | RBS | 253748 | 5 | + | 0.4 | |
rmpJ | BPEN_219 | 50S ribosomal subunit protein L36 | chromosome | CDS | 253758 | 117 | + | 0.367521 |
rnc | BPEN_560 | chromosome | RBS | 670521 | 5 | - | 0.2 | |
rnc | BPEN_560 | RNase III | chromosome | CDS | 669812 | 690 | - | 0.337681 |
rne | BPEN_422 | chromosome | RBS | 498311 | 5 | + | 0.4 | |
rne | BPEN_422 | ribonuclease E | chromosome | CDS | 498327 | 2601 | + | 0.318724 |
rnhA | BPEN_231 | chromosome | RBS | 262457 | 5 | - | 0.2 | |
rnhA | BPEN_231 | ribonuclease H | chromosome | CDS | 261986 | 456 | - | 0.326754 |
rnhB | BPEN_293 | ribonuclease HII | chromosome | CDS | 339451 | 654 | + | 0.311927 |
rnhB | BPEN_293 | chromosome | RBS | 339437 | 5 | + | 0.4 | |
rnpA | BPEN_013 | RNase P, protein component | chromosome | CDS | 14295 | 348 | - | 0.310345 |
rnpA | BPEN_013 | chromosome | RBS | 14650 | 5 | - | 0.6 | |
rnpA | BPEN_013 | chromosome | RBS | 14364 | 5 | - | 0.4 | |
rnpB | BPEN_054 | rnpB | chromosome | misc_RNA | 65781 | 424 | + | 0.400943 |
rnt | BPEN_379 | ribonuclease T | chromosome | CDS | 445293 | 654 | - | 0.37156 |
rnt | BPEN_379 | chromosome | RBS | 445987 | 5 | - | 0.6 | |
rpe | BPEN_590 | ribulose-phosphate 3-epimerase | chromosome | CDS | 709268 | 666 | - | 0.310811 |
rpiA | BPEN_263 | chromosome | RBS | 299757 | 5 | + | 0.6 | |
rpiA | BPEN_263 | ribose-5-phosphate isomerase A | chromosome | CDS | 299768 | 657 | + | 0.319635 |
rplA | BPEN_580 | 50S ribosomal subunit protein L1 | chromosome | CDS | 698574 | 708 | - | 0.30791 |
rplA | BPEN_580 | chromosome | RBS | 699358 | 5 | - | 0.6 | |
rplB | BPEN_201 | chromosome | RBS | 244956 | 5 | + | 0.6 | |
rplB | BPEN_201 | 50S ribosomal protein L2 | chromosome | CDS | 244971 | 828 | + | 0.390097 |
rplC | BPEN_198 | 50S ribosomal subunit protein L3 | chromosome | CDS | 243362 | 654 | + | 0.345566 |
rplD | BPEN_199 | 50S ribosomal protein L4 | chromosome | CDS | 244016 | 633 | + | 0.314376 |
rplD | BPEN_199 | chromosome | RBS | 243949 | 5 | + | 0.4 | |
rplE | BPEN_210 | chromosome | RBS | 248958 | 5 | + | 0.4 | |
rplE | BPEN_210 | 50S ribosomal subunit protein L5 | chromosome | CDS | 248969 | 540 | + | 0.309259 |
rplF | BPEN_213 | 50S ribosomal protein L6 | chromosome | CDS | 250263 | 567 | + | 0.335097 |
rplF | BPEN_213 | chromosome | RBS | 250248 | 5 | + | 0.8 | |
rplI | BPEN_090 | 50S ribosomal subunit protein L9 | chromosome | CDS | 105066 | 462 | + | 0.307359 |
rplI | BPEN_090 | chromosome | RBS | 105055 | 5 | + | 0.4 | |
rplJ | BPEN_579 | 50S ribosomal subunit protein L10 | chromosome | CDS | 697734 | 492 | - | 0.313008 |
rplJ | BPEN_579 | chromosome | RBS | 698283 | 5 | - | 0.4 | |
rplK | BPEN_581 | 50S ribosomal subunit protein L11 | chromosome | CDS | 699287 | 432 | - | 0.333333 |
rplK | BPEN_581 | chromosome | RBS | 699726 | 5 | - | 0.6 | |
rplL | BPEN_578 | 50S ribosomal subunit protein L7/L12 | chromosome | CDS | 697272 | 369 | - | 0.341463 |
rplL | BPEN_578 | chromosome | RBS | 697646 | 5 | - | 0.6 | |
rplM | BPEN_050 | 50S ribosomal subunitprotein L13 | chromosome | CDS | 61354 | 435 | + | 0.314943 |
rplN | BPEN_208 | chromosome | RBS | 248237 | 5 | + | 0.6 | |
rplN | BPEN_208 | 50S ribosomal subunit protein L14 | chromosome | CDS | 248249 | 372 | + | 0.376344 |
rplO | BPEN_217 | chromosome | RBS | 251923 | 5 | + | 0.6 | |
rplO | BPEN_217 | 50S ribosomal subunit protein L15 | chromosome | CDS | 251937 | 435 | + | 0.370115 |
rplP | BPEN_205 | chromosome | RBS | 247142 | 5 | + | 0.6 | |
rplP | BPEN_205 | 50S ribosomal protein L16 | chromosome | CDS | 247241 | 405 | + | 0.37037 |
rplQ | BPEN_224 | chromosome | RBS | 256428 | 5 | + | 0.4 | |
rplQ | BPEN_224 | 50S ribosomal subunit protein L17 | chromosome | CDS | 256441 | 378 | + | 0.31746 |
rplR | BPEN_214 | 50S ribosomal subunit protein L18 | chromosome | CDS | 250861 | 354 | + | 0.327684 |
rplR | BPEN_214 | chromosome | RBS | 250848 | 5 | + | 0.2 | |
rplS | BPEN_182 | 50S ribosomal protein L19 | chromosome | CDS | 228767 | 351 | + | 0.336182 |
rplS | BPEN_182 | chromosome | RBS | 228751 | 5 | + | 0.4 | |
rplT | BPEN_365 | 50S ribosomal subunit protein L20 | chromosome | CDS | 431338 | 363 | + | 0.349862 |
rplT | BPEN_365 | chromosome | RBS | 431323 | 5 | + | 0.6 | |
rplU | BPEN_096 | chromosome | RBS | 114546 | 5 | + | 0.4 | |
rplU | BPEN_096 | 50S ribosomal subunit protein L21 | chromosome | CDS | 114559 | 318 | + | 0.31761 |
rplV | BPEN_203 | chromosome | RBS | 246144 | 5 | + | 0.6 | |
rplV | BPEN_203 | 50S ribosomal subunit protein L22 | chromosome | CDS | 246156 | 330 | + | 0.306061 |
rplW | BPEN_200 | chromosome | RBS | 244545 | 5 | + | 0.6 | |
rplW | BPEN_200 | 50S ribosomal subunit protein L23 | chromosome | CDS | 244645 | 303 | + | 0.287129 |
rplX | BPEN_209 | 50S ribosomal subunit protein L24 | chromosome | CDS | 248636 | 321 | + | 0.28972 |
rplX | BPEN_209 | chromosome | RBS | 248621 | 5 | + | 0.6 | |
rplY | BPEN_488 | chromosome | RBS | 583151 | 5 | + | 0.4 | |
rplY | BPEN_488 | 50S ribosomal subunit protein L25 | chromosome | CDS | 583227 | 294 | + | 0.295918 |
rpmA | BPEN_097 | 50S ribosomal protein L27 | chromosome | CDS | 114922 | 255 | + | 0.380392 |
rpmA | BPEN_097 | chromosome | RBS | 114912 | 5 | + | 0.4 | |
rpmB | BPEN_636 | 50S ribosomal subunit protein L28 | chromosome | CDS | 759889 | 228 | - | 0.372807 |
rpmB | BPEN_636 | chromosome | RBS | 760122 | 5 | - | 0.6 | |
rpmC | BPEN_206 | 50S ribosomal subunit protein L29 | chromosome | CDS | 247645 | 213 | + | 0.234742 |
rpmC | BPEN_206 | chromosome | RBS | 247636 | 5 | + | 0.4 | |
rpmD | BPEN_216 | chromosome | pseudo | 251750 | 181 | + | 0.370166 | |
rpmE | BPEN_621 | chromosome | RBS | 743352 | 5 | - | 0.2 | |
rpmE | BPEN_621 | 50S ribosomal subunit protein L31 | chromosome | CDS | 743051 | 249 | - | 0.269076 |
rpmF | BPEN_420 | chromosome | RBS | 495906 | 5 | - | 0.6 | |
rpmF | BPEN_420 | 50S ribosomal subunit protein L32 | chromosome | CDS | 495727 | 171 | - | 0.415205 |
rpmG | BPEN_635 | 50S ribosomal subunit protein L33 | chromosome | CDS | 759697 | 168 | - | 0.285714 |
rpmG | BPEN_635 | chromosome | RBS | 759872 | 5 | - | 0.6 | |
rpmI | BPEN_364 | chromosome | RBS | 431055 | 5 | + | 0.8 | |
rpmI | BPEN_364 | 50S ribosomal subunit protein L35 | chromosome | CDS | 431067 | 198 | + | 0.252525 |
rpoA | BPEN_223 | chromosome | RBS | 255396 | 5 | + | 0.4 | |
rpoA | BPEN_223 | RNA polymerase, alpha subunit | chromosome | CDS | 255408 | 993 | + | 0.336354 |
rpoB | BPEN_577 | chromosome | RBS | 697021 | 5 | - | 0.4 | |
rpoB | BPEN_577 | DNA-directed RNA polymerase, beta-subunit | chromosome | CDS | 692991 | 4026 | - | 0.335569 |
rpoC | BPEN_576 | DNA-directed RNA polymerase beta' subunit | chromosome | CDS | 688652 | 4251 | - | 0.360151 |
rpoD | BPEN_057 | RNA polymerase sigma-70 factor | chromosome | CDS | 67947 | 1836 | - | 0.330065 |
rpoD | BPEN_057 | chromosome | RBS | 69789 | 5 | - | 0.8 | |
rpoH | BPEN_653 | RNA polymerase sigma factor | chromosome | CDS | 784116 | 849 | - | 0.314488 |
rpoH | BPEN_653 | chromosome | RBS | 784970 | 5 | - | 0.6 | |
rpoZ | BPEN_642 | chromosome | RBS | 766318 | 5 | + | 0.4 | |
rpoZ | BPEN_642 | DNA-directed RNA polymerase, subunit K/omega | chromosome | CDS | 766329 | 192 | + | 0.328125 |
rpsA | BPEN_391 | chromosome | RBS | 461539 | 5 | - | 0.4 | |
rpsA | BPEN_391 | 30S ribosomal protein S1 | chromosome | CDS | 459768 | 1695 | - | 0.343953 |
rpsB | BPEN_279 | 30S ribosomal protein S2 | chromosome | CDS | 325186 | 687 | + | 0.3377 |
rpsC | BPEN_204 | chromosome | RBS | 246505 | 5 | + | 0.8 | |
rpsC | BPEN_204 | 30S ribosomal subunit protein S3 | chromosome | CDS | 246519 | 711 | + | 0.372714 |
rpsD | BPEN_222 | 30S ribosomal protein S4 | chromosome | CDS | 254750 | 624 | + | 0.328526 |
rpsD | BPEN_222 | chromosome | RBS | 254737 | 5 | + | 0.4 | |
rpsE | BPEN_215 | chromosome | RBS | 251161 | 5 | + | 0.8 | |
rpsE | BPEN_215 | 30S ribosomal subunit protein S5 | chromosome | CDS | 251230 | 525 | + | 0.352381 |
rpsF | BPEN_088 | 30S ribosomal subunit protein S6 | chromosome | CDS | 104194 | 354 | + | 0.30226 |
rpsF | BPEN_088 | chromosome | RBS | 104181 | 5 | + | 0.4 | |
rpsG | BPEN_586 | 30S ribosomal protein S7 | chromosome | CDS | 704294 | 471 | - | 0.375796 |
rpsG | BPEN_586 | chromosome | RBS | 704774 | 5 | - | 0.4 | |
rpsH | BPEN_212 | 30S ribosomal subunit protein S8 | chromosome | CDS | 249878 | 396 | + | 0.315657 |
rpsH | BPEN_212 | chromosome | RBS | 249868 | 5 | + | 0.6 | |
rpsI | BPEN_051 | 30S ribosomal subunit protein S9 | chromosome | CDS | 61816 | 399 | + | 0.35589 |
rpsI | BPEN_051 | chromosome | RBS | 61731 | 5 | + | 0.4 | |
rpsJ | BPEN_197 | chromosome | RBS | 242928 | 5 | + | 0.4 | |
rpsJ | BPEN_197 | 30S ribosomal subunit protein S10 | chromosome | CDS | 242945 | 312 | + | 0.403846 |
rpsK | BPEN_221 | 30S ribosomal protein S11 | chromosome | CDS | 254320 | 393 | + | 0.414758 |
rpsK | BPEN_221 | chromosome | RBS | 254223 | 5 | + | 0.6 | |
rpsL | BPEN_587 | 30S ribosomal subunit protein S12 | chromosome | CDS | 704916 | 375 | - | 0.418667 |
rpsL | BPEN_587 | chromosome | RBS | 705300 | 5 | - | 0.6 | |
rpsM | BPEN_220 | 30S ribosomal protein S13 | chromosome | CDS | 253923 | 366 | + | 0.374317 |
rpsN | BPEN_211 | chromosome | RBS | 249528 | 5 | + | 0.6 | |
rpsN | BPEN_211 | 30S ribosomal subunit protein S14 | chromosome | CDS | 249541 | 306 | + | 0.382353 |
rpsO | BPEN_111 | 30S ribosomal subunit protein S15 | chromosome | CDS | 129869 | 270 | + | 0.3 |
rpsO | BPEN_111 | chromosome | RBS | 129858 | 5 | + | 0.6 | |
rpsP | BPEN_179 | chromosome | RBS | 227144 | 5 | + | 0.4 | |
rpsP | BPEN_179 | 30S ribosomal subunit protein S16 | chromosome | CDS | 227157 | 243 | + | 0.329218 |
rpsQ | BPEN_207 | 30S ribosomal subunit protein S17 | chromosome | CDS | 247872 | 255 | + | 0.298039 |
rpsQ | BPEN_207 | chromosome | RBS | 247859 | 5 | + | 0.6 | |
rpsR | BPEN_089 | chromosome | misc_feature | 104773 | 5 | + | 0.6 | |
rpsR | BPEN_089 | 30S ribosomal subunit protein S18 | chromosome | CDS | 104772 | 240 | + | 0.3625 |
rpsR | BPEN_089 | chromosome | misc_feature | 104784 | 1 | + | ||
rpsS | BPEN_202 | chromosome | RBS | 245812 | 5 | + | 0.4 | |
rpsS | BPEN_202 | 30S ribosomal subunit protein S19 | chromosome | CDS | 245825 | 282 | + | 0.35461 |
rpsT | BPEN_120 | 30S ribosomal subunit protein S20 | chromosome | CDS | 144617 | 267 | - | 0.35206 |
rpsT | BPEN_120 | chromosome | RBS | 144891 | 5 | - | 0.4 | |
rpsU | BPEN_059 | chromosome | RBS | 72085 | 5 | - | 0.4 | |
rpsU | BPEN_059 | 30S ribosomal subunit protein S21 | chromosome | CDS | 71861 | 216 | - | 0.319444 |
rrf | BPEN_229 | 5S ribosomal RNA | chromosome | rRNA | 260446 | 117 | + | 0.512821 |
rrl | BPEN_574 | 23S ribosomal RNA | chromosome | rRNA | 680991 | 2993 | - | 0.463415 |
rrmJ | BPEN_100 | chromosome | RBS | 117728 | 5 | + | 0.4 | |
rrmJ | BPEN_100 | Ribosomal RNA large subunit (23S) methyltransferase J | chromosome | CDS | 117742 | 627 | + | 0.365231 |
rrs | BPEN_572 | 16S ribosomal RNA | chromosome | rRNA | 684481 | 1570 | - | 0.487898 |
sbcB | BPEN_476 | chromosome | RBS | 567671 | 5 | + | 0.2 | |
sbcB | BPEN_476 | exonuclease I | chromosome | CDS | 567703 | 1503 | + | 0.284764 |
sdhA | BPEN_339 | chromosome | RBS | 400078 | 5 | + | 0.6 | |
sdhA | BPEN_339 | succinate dehydrogenase catalytic subunit | chromosome | CDS | 400090 | 1785 | + | 0.378151 |
sdhB | BPEN_340 | succinate dehydrogenase catalytic subunit | chromosome | CDS | 401891 | 747 | + | 0.327979 |
sdhB | BPEN_340 | chromosome | RBS | 401879 | 5 | + | 0.6 | |
sdhC | BPEN_337 | chromosome | RBS | 399347 | 5 | + | 0.4 | |
sdhC | BPEN_337 | succinate dehydrogenase cytochrome b-556 subunit | chromosome | CDS | 399359 | 408 | + | 0.259804 |
sdhD | BPEN_338 | chromosome | RBS | 399730 | 5 | + | 0.4 | |
sdhD | BPEN_338 | succinate dehydrogenase hydrophobic membrane anchor protein | chromosome | CDS | 399742 | 348 | + | 0.336207 |
secA | BPEN_152 | translocase | chromosome | CDS | 186811 | 2736 | + | 0.305556 |
secA | BPEN_152 | chromosome | RBS | 186794 | 5 | + | 0.4 | |
secB | BPEN_627 | chromosome | RBS | 750778 | 5 | - | 0.6 | |
secB | BPEN_627 | molecular chaperone in protein export | chromosome | CDS | 750237 | 465 | - | 0.309677 |
secD | BPEN_238 | preprotein translocase, auxillary membrane component | chromosome | CDS | 268103 | 1860 | + | 0.289785 |
secD | BPEN_238 | chromosome | RBS | 268088 | 5 | + | 0.4 | |
secE | BPEN_583 | chromosome | RBS | 700748 | 5 | - | 0.2 | |
secE | BPEN_583 | preprotein translocase, membrane component | chromosome | CDS | 700393 | 348 | - | 0.321839 |
secF | BPEN_239 | preprotein translocase, auxillary membrane component | chromosome | CDS | 270024 | 918 | + | 0.276688 |
secG | BPEN_104 | preprotein translocase, membrane component | chromosome | CDS | 122862 | 282 | + | 0.248227 |
secG | BPEN_104 | chromosome | RBS | 122847 | 5 | + | 0.8 | |
secY | BPEN_218 | preprotein translocase, membrane component | chromosome | CDS | 252382 | 1338 | + | 0.328102 |
serC | BPEN_394 | phosphoserine aminotransferase | chromosome | CDS | 463815 | 1089 | - | 0.310376 |
serS | BPEN_395 | chromosome | RBS | 466537 | 5 | - | 0.2 | |
serS | BPEN_395 | seryl-tRNA synthetase | chromosome | CDS | 465241 | 1287 | - | 0.334887 |
slyA | BPEN_380 | transcriptional regulator SlyA | chromosome | CDS | 446720 | 435 | + | 0.291954 |
slyA | BPEN_380 | chromosome | RBS | 446707 | 5 | + | 0.4 | |
smpA | BPEN_566 | chromosome | RBS | 676571 | 5 | + | 0.6 | |
smpA | BPEN_566 | small membrane protein A | chromosome | CDS | 676582 | 339 | + | 0.283186 |
smpB | BPEN_568 | SsrA-binding protein | chromosome | CDS | 677490 | 465 | + | 0.227957 |
smpB | BPEN_568 | chromosome | RBS | 677413 | 5 | + | 0.6 | |
sodA | BPEN_021 | chromosome | RBS | 24983 | 5 | - | 0.6 | |
sodA | BPEN_021 | superoxide dismutase (Mn) | chromosome | CDS | 24354 | 618 | - | 0.304207 |
speB | BPEN_260 | agmatinase | chromosome | CDS | 295662 | 921 | + | 0.323561 |
speB | BPEN_260 | chromosome | RBS | 295653 | 5 | + | 0.4 | |
sppA | BPEN_450 | protease IV | chromosome | CDS | 534585 | 1878 | + | 0.29819 |
sppA | BPEN_450 | chromosome | RBS | 534572 | 5 | + | 0.4 | |
ssb | BPEN_028 | ssDNA-binding protein controls activity of RecBCD nuclease | chromosome | CDS | 34030 | 492 | + | 0.361789 |
sucA | BPEN_341 | 2-oxoglutarate dehydrogenase E1 component | chromosome | CDS | 402838 | 2862 | + | 0.317959 |
sucA | BPEN_341 | chromosome | RBS | 402827 | 5 | + | 0.4 | |
sucB | BPEN_342 | chromosome | RBS | 405710 | 5 | + | 0.4 | |
sucB | BPEN_342 | dihydrolipoamide succinyltransferase E2 component | chromosome | CDS | 405720 | 1245 | + | 0.317269 |
sucC | BPEN_343 | chromosome | RBS | 407068 | 5 | + | 0.4 | |
sucC | BPEN_343 | succinyl-CoA synthetase, beta chain | chromosome | CDS | 407081 | 1176 | + | 0.315476 |
sucD | BPEN_344 | succinyl-CoA synthetase, alpha chain | chromosome | CDS | 408240 | 882 | + | 0.344671 |
sucD | BPEN_344 | chromosome | RBS | 408227 | 5 | + | 0.4 | |
sufA | BPEN_369 | Fe-S cluster assembly protein | chromosome | CDS | 437376 | 381 | + | 0.322835 |
sufA | BPEN_369 | chromosome | RBS | 437365 | 5 | + | 0.4 | |
sufB | BPEN_370 | putative transport protein associated with Fe-S cluster assembly | chromosome | CDS | 437771 | 1497 | + | 0.317301 |
sufB | BPEN_370 | chromosome | RBS | 437678 | 5 | + | 0.4 | |
sufC | BPEN_371 | putative transport protein associated with Fe-S cluster assembly (ABC superfamily, atp_bind) | chromosome | CDS | 439324 | 741 | + | 0.310391 |
sufD | BPEN_372 | chromosome | RBS | 440033 | 5 | + | 0.4 | |
sufD | BPEN_372 | SufD | chromosome | CDS | 440045 | 1290 | + | 0.291473 |
sufE | BPEN_374 | SufE | chromosome | CDS | 442576 | 429 | + | 0.312354 |
sufE | BPEN_374 | chromosome | RBS | 442496 | 5 | + | 0.4 | |
sufS | BPEN_373 | chromosome | RBS | 441320 | 5 | + | 0.4 | |
sufS | BPEN_373 | selenocysteine lyase | chromosome | CDS | 441331 | 1227 | + | 0.319478 |
suhB | BPEN_555 | putative myo-inositol-1(or 4)-monophosphatase | chromosome | CDS | 665003 | 795 | + | 0.298113 |
suhB | BPEN_555 | chromosome | RBS | 664992 | 5 | + | 0.2 | |
surA | BPEN_132 | peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 159993 | 1278 | - | 0.246479 |
surA | BPEN_132 | chromosome | RBS | 161303 | 5 | - | 0.2 | |
tadA | BPEN_557 | chromosome | RBS | 667977 | 5 | - | 0.4 | |
tadA | BPEN_557 | tRNA-specific adenosine deaminase | chromosome | CDS | 667443 | 468 | - | 0.348291 |
talA | BPEN_532 | transaldolase A | chromosome | CDS | 636778 | 852 | + | 0.212441 |
talA | BPEN_532 | chromosome | RBS | 636767 | 5 | + | 0.8 | |
tdk | BPEN_447 | thymidine kinase | chromosome | CDS | 529960 | 618 | - | 0.294498 |
tdk | BPEN_447 | chromosome | RBS | 530587 | 5 | - | 0.6 | |
tgt | BPEN_236 | tRNA-guanine transglycosylase | chromosome | CDS | 266542 | 1107 | + | 0.33785 |
tgt | BPEN_236 | chromosome | RBS | 266530 | 5 | + | 0.4 | |
thiI | BPEN_246 | thiamine biosynthesis protein ThiI | chromosome | CDS | 277383 | 1461 | + | 0.272416 |
thiI | BPEN_246 | chromosome | RBS | 277285 | 5 | + | 0.4 | |
thrA | BPEN_115 | chromosome | RBS | 136288 | 5 | + | 0.6 | |
thrA | BPEN_115 | bifunctional aspartokinase I/homeserine dehydrogenase I | chromosome | CDS | 136300 | 2451 | + | 0.324357 |
thrB | BPEN_116 | homoserine kinase | chromosome | CDS | 138774 | 939 | + | 0.334398 |
thrB | BPEN_116 | chromosome | RBS | 138759 | 5 | + | 0.4 | |
thrC | BPEN_117 | threonine synthase | chromosome | CDS | 139712 | 1302 | + | 0.313364 |
thrS | BPEN_362 | chromosome | RBS | 429147 | 5 | + | 0.4 | |
thrS | BPEN_362 | threonyl-tRNA synthetase | chromosome | CDS | 429232 | 1227 | + | 0.312958 |
tilS | BPEN_296 | tRNA(Ile)-lysidine synthetase | chromosome | CDS | 344776 | 1533 | + | 0.300065 |
tilS | BPEN_296 | chromosome | RBS | 344764 | 5 | + | 0.2 | |
tktA | BPEN_533 | chromosome | RBS | 637729 | 5 | + | 0.4 | |
tktA | BPEN_533 | transketolase | chromosome | CDS | 637742 | 1998 | + | 0.347848 |
tldD | BPEN_305 | TldD | chromosome | CDS | 355310 | 1464 | + | 0.358607 |
tldD | BPEN_305 | chromosome | RBS | 355300 | 5 | + | 0.4 | |
tmRNA | BPEN_569 | tmRNA | chromosome | misc_RNA | 678009 | 388 | + | 0.371134 |
tmk | BPEN_413 | thymidylate kinase | chromosome | CDS | 489149 | 639 | - | 0.331768 |
tmk | BPEN_413 | chromosome | RBS | 489791 | 5 | - | 0.4 | |
tolA | BPEN_347 | chromosome | RBS | 410672 | 5 | + | 0.2 | |
tolA | BPEN_347 | TolA | chromosome | CDS | 410688 | 1185 | + | 0.332489 |
tolB | BPEN_348 | chromosome | RBS | 411939 | 5 | + | ||
tolB | BPEN_348 | TolB | chromosome | CDS | 411950 | 1362 | + | 0.315712 |
tolQ | BPEN_345 | chromosome | RBS | 409406 | 5 | + | 0.4 | |
tolQ | BPEN_345 | TolQ | chromosome | CDS | 409499 | 750 | + | 0.294667 |
tolR | BPEN_346 | TolR | chromosome | CDS | 410217 | 426 | + | 0.288732 |
tolR | BPEN_346 | chromosome | RBS | 410205 | 5 | + | 0.4 | |
tonB | BPEN_445 | energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins | chromosome | CDS | 526804 | 729 | - | 0.283951 |
tpiA | BPEN_623 | chromosome | RBS | 745729 | 5 | + | 0.8 | |
tpiA | BPEN_623 | triosephosphate isomerase | chromosome | CDS | 745741 | 777 | + | 0.312741 |
trmD | BPEN_181 | tRNA(guanine-N1)methyltransferase | chromosome | CDS | 227992 | 768 | + | 0.339844 |
trmE | BPEN_011 | chromosome | RBS | 12420 | 5 | - | 0.4 | |
trmE | BPEN_011 | tRNA modification GTPase | chromosome | CDS | 10913 | 1413 | - | 0.312102 |
trmU | BPEN_404 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 479466 | 1104 | + | 0.327899 |
trpA | BPEN_443 | chromosome | RBS | 524601 | 5 | + | 0.4 | |
trpA | BPEN_443 | tryptophan synthase, alpha protein | chromosome | CDS | 524616 | 831 | + | 0.309266 |
trpB | BPEN_442 | tryptophan synthase subunit beta | chromosome | CDS | 523423 | 1191 | + | 0.354324 |
trpC | BPEN_441 | chromosome | RBS | 521994 | 5 | + | 0.2 | |
trpC | BPEN_441 | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | chromosome | CDS | 522007 | 1374 | + | 0.310044 |
trpD | BPEN_440 | anthranilate synthase component II: anthranilate phosphoribosyltransferase | chromosome | CDS | 521004 | 1026 | + | 0.339181 |
trpD | BPEN_440 | chromosome | RBS | 520992 | 5 | + | 0.4 | |
trpE | BPEN_438 | anthranilate synthase component I | chromosome | CDS | 518841 | 1563 | + | 0.347409 |
trpE | BPEN_438 | chromosome | RBS | 518798 | 5 | + | 0.4 | |
trpG | BPEN_439 | anthranilate synthase component II: glutamine amidotransferase | chromosome | CDS | 520406 | 597 | + | 0.341709 |
trpG | BPEN_439 | chromosome | RBS | 520390 | 5 | + | 0.6 | |
trpS | BPEN_589 | tryptophanyl-tRNA synthetase | chromosome | CDS | 708033 | 999 | - | 0.288288 |
trpS | BPEN_589 | chromosome | RBS | 709041 | 5 | - | 0.4 | |
truA | BPEN_512 | tRNA pseudouridine synthase A | chromosome | CDS | 613072 | 786 | - | 0.361323 |
truA | BPEN_512 | chromosome | RBS | 613865 | 5 | - | 0.4 | |
truB | BPEN_110 | chromosome | RBS | 128675 | 5 | + | 0.6 | |
truB | BPEN_110 | tRNA pseudouridine 5S synthase | chromosome | CDS | 128757 | 783 | + | 0.320562 |
trxA | BPEN_608 | thioredoxin 1, redox factor | chromosome | CDS | 728530 | 327 | - | 0.287462 |
trxA | BPEN_608 | chromosome | RBS | 728862 | 5 | - | 0.6 | |
trxB | BPEN_398 | chromosome | RBS | 471048 | 5 | + | 0.6 | |
trxB | BPEN_398 | thioredoxin reductase | chromosome | CDS | 471064 | 957 | + | 0.338558 |
tsf | BPEN_280 | chromosome | RBS | 325947 | 5 | + | 0.2 | |
tsf | BPEN_280 | elongation factor Ts | chromosome | CDS | 325958 | 819 | + | 0.290598 |
tuf | BPEN_584 | elongation factor Tu | chromosome | CDS | 700810 | 1185 | - | 0.372996 |
tuf | BPEN_584 | chromosome | RBS | 702002 | 5 | - | 0.6 | |
tyrA | BPEN_184 | chorismate mutase T | chromosome | CDS | 230704 | 1128 | + | 0.297872 |
tyrA | BPEN_184 | chromosome | RBS | 230689 | 5 | + | 0.6 | |
tyrS | BPEN_382 | chromosome | RBS | 448195 | 5 | + | 0.4 | |
tyrS | BPEN_382 | tyrosyl-tRNA synthetase | chromosome | CDS | 448260 | 1284 | + | 0.301402 |
ubiA | BPEN_025 | 4-hydroxybenzoate octaprenyl transferase | chromosome | CDS | 30037 | 873 | + | 0.306987 |
ubiA | BPEN_025 | chromosome | RBS | 29967 | 5 | + | 0.2 | |
ubiB | BPEN_648 | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway | chromosome | CDS | 775575 | 1641 | - | 0.291286 |
ubiB | BPEN_648 | chromosome | RBS | 777221 | 5 | - | 0.6 | |
ubiD | BPEN_647 | 3-octaprenyl-4-hydroxybenzoate decarboxylase | chromosome | CDS | 773904 | 1464 | - | 0.346995 |
ubiD | BPEN_647 | chromosome | RBS | 775380 | 5 | - | 0.2 | |
ubiE | BPEN_649 | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | chromosome | CDS | 777805 | 765 | - | 0.29281 |
ubiF | BPEN_326 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase | chromosome | CDS | 387214 | 1170 | + | 0.335897 |
ubiG | BPEN_493 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 589738 | 693 | + | 0.327561 |
ubiG | BPEN_493 | chromosome | RBS | 589712 | 5 | + | 0.4 | |
ubiH | BPEN_266 | 2-octaprenyl-6-methoxyphenol hydroxylase | chromosome | CDS | 302617 | 1191 | + | 0.307305 |
ubiX | BPEN_386 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 454174 | 615 | - | 0.35122 |
ubiX | BPEN_386 | chromosome | RBS | 454808 | 5 | - | 0.6 | |
udp | BPEN_651 | uridine phosphorylase | chromosome | CDS | 780488 | 798 | - | 0.359649 |
ung | BPEN_563 | chromosome | RBS | 673817 | 5 | + | 0.6 | |
ung | BPEN_563 | uracil-DNA glycosylase | chromosome | CDS | 673829 | 693 | + | 0.318903 |
upp | BPEN_538 | uracil phosphoribosyltransferase | chromosome | CDS | 643556 | 627 | - | 0.330144 |
uppS | BPEN_284 | chromosome | RBS | 329788 | 5 | + | 0.4 | |
uppS | BPEN_284 | undecaprenyl pyrophosphate synthetase | chromosome | CDS | 329804 | 753 | + | 0.34927 |
ureA | BPEN_544 | chromosome | RBS | 649623 | 5 | - | 0.4 | |
ureA | BPEN_544 | putative urease structural subunit A (gamma) | chromosome | CDS | 649315 | 303 | - | 0.339934 |
ureB | BPEN_543 | putative urease structural subunit B (beta) | chromosome | CDS | 648979 | 309 | - | 0.326861 |
ureC | BPEN_542 | putative urease structural subunit C (alpha) | chromosome | CDS | 647273 | 1704 | - | 0.370892 |
ureD | BPEN_545 | putative urease accessory protein D | chromosome | CDS | 649631 | 837 | - | 0.330944 |
ureD | BPEN_545 | chromosome | RBS | 650542 | 5 | - | 0.4 | |
ureF | BPEN_541 | putative urease accessory protein F | chromosome | CDS | 646116 | 687 | - | 0.378457 |
ureG | BPEN_540 | putative urease accessory protein G | chromosome | CDS | 645412 | 624 | - | 0.333333 |
uvrD | BPEN_598 | chromosome | pseudo | 719199 | 1916 | - | 0.274008 | |
valS | BPEN_033 | valine tRNA synthetase | chromosome | CDS | 40789 | 2874 | - | 0.30167 |
valS | BPEN_033 | chromosome | RBS | 43730 | 5 | - | 0.6 | |
visC | BPEN_267 | chromosome | RBS | 303793 | 5 | + | 0.4 | |
visC | BPEN_267 | putative monooxygenase, FAD/NAD(P)-binding domain | chromosome | CDS | 303831 | 1224 | + | 0.293301 |
xthA | BPEN_449 | exonuclease III | chromosome | CDS | 533574 | 807 | + | 0.337051 |
yadR | BPEN_160 | chromosome | RBS | 204271 | 5 | + | 0.4 | |
yadR | BPEN_160 | hypothetical protein | chromosome | CDS | 204313 | 354 | + | 0.305085 |
yaeT | BPEN_287 | outer membrane protein precursor | chromosome | CDS | 332902 | 2424 | + | 0.269389 |
yaeT | BPEN_287 | chromosome | RBS | 332891 | 5 | + | ||
yajC | BPEN_237 | chromosome | RBS | 267710 | 5 | + | 0.4 | |
yajC | BPEN_237 | preprotein translocase, auxillary membrane component | chromosome | CDS | 267721 | 348 | + | 0.336207 |
yajR | BPEN_247 | putative transport protein (MFS family) | chromosome | CDS | 279173 | 1161 | - | 0.282515 |
ybeB | BPEN_318 | chromosome | RBS | 377559 | 5 | - | 0.6 | |
ybeB | BPEN_318 | hypothetical protein | chromosome | CDS | 377234 | 318 | - | 0.323899 |
ybeX | BPEN_323 | putative integral membrane protein with CBS regulatory domain | chromosome | CDS | 384252 | 885 | - | 0.301695 |
ybeY | BPEN_324 | chromosome | RBS | 385648 | 5 | - | 0.4 | |
ybeY | BPEN_324 | hypothetical protein | chromosome | CDS | 385169 | 474 | - | 0.320675 |
ybfF | BPEN_334 | chromosome | RBS | 395721 | 5 | - | 0.4 | |
ybfF | BPEN_334 | putative enzyme with alpha/beta-Hydrolase domain | chromosome | CDS | 394862 | 765 | - | 0.341176 |
ybgF | BPEN_350 | chromosome | RBS | 413853 | 5 | + | 0.4 | |
ybgF | BPEN_350 | putative periplasmic protein | chromosome | CDS | 413906 | 786 | + | 0.28117 |
ybhE | BPEN_351 | chromosome | RBS | 416767 | 5 | - | 0.4 | |
ybhE | BPEN_351 | putative isomerase | chromosome | CDS | 415746 | 1014 | - | 0.336292 |
ybhL | BPEN_353 | chromosome | RBS | 417923 | 5 | + | 0.6 | |
ybhL | BPEN_353 | putative transport protein | chromosome | CDS | 417934 | 711 | + | 0.33474 |
ybiS | BPEN_424 | hypothetical protein | chromosome | CDS | 502631 | 948 | + | 0.317511 |
ycaR | BPEN_388 | hypothetical protein | chromosome | CDS | 455918 | 168 | - | 0.291667 |
ycaR | BPEN_388 | chromosome | RBS | 456093 | 5 | - | 0.2 | |
ycbL | BPEN_435 | chromosome | RBS | 512360 | 5 | - | 0.4 | |
ycbL | BPEN_435 | putative enzyme with metallo-hydrolase/oxidoreductase domain | chromosome | CDS | 511701 | 654 | - | 0.33792 |
yccK | BPEN_430 | chromosome | RBS | 506132 | 5 | + | 0.4 | |
yccK | BPEN_430 | putative sulfite reductase | chromosome | CDS | 506144 | 330 | + | 0.284848 |
yccV | BPEN_431 | hypothetical protein | chromosome | CDS | 506681 | 318 | + | 0.330189 |
yccV | BPEN_431 | chromosome | RBS | 506670 | 5 | + | 0.8 | |
yceL | BPEN_470 | putative membrane transporter (MFS family) | chromosome | CDS | 563140 | 1224 | + | 0.321078 |
ycfF | BPEN_410 | putative protein kinase C inhibitor | chromosome | CDS | 486715 | 351 | - | 0.296296 |
ycfF | BPEN_410 | chromosome | RBS | 487077 | 5 | - | 0.4 | |
ycfH | BPEN_411 | putative metallo-dependent hydrolase | chromosome | CDS | 487339 | 786 | - | 0.315522 |
ycfM | BPEN_409 | chromosome | RBS | 486536 | 5 | - | 0.2 | |
ycfM | BPEN_409 | putative fibronectin-binding protein | chromosome | CDS | 485989 | 537 | - | 0.27933 |
ychF | BPEN_354 | chromosome | RBS | 419921 | 5 | - | 0.2 | |
ychF | BPEN_354 | putative GTP-binding protein with nucleoside triP hydrolase domain | chromosome | CDS | 418754 | 1077 | - | 0.290622 |
yciC | BPEN_444 | chromosome | RBS | 525882 | 5 | + | 0.4 | |
yciC | BPEN_444 | hypothetical protein | chromosome | CDS | 525901 | 738 | + | 0.253388 |
ydhD | BPEN_378 | conserved protein with thioredoxin-like domain | chromosome | CDS | 444788 | 333 | + | 0.315315 |
yeaZ | BPEN_456 | putative glycoprotein endopeptidase, actin-like ATPase domain | chromosome | CDS | 541729 | 720 | - | 0.3625 |
yeaZ | BPEN_456 | chromosome | RBS | 542516 | 5 | - | 0.2 | |
yebA | BPEN_466 | chromosome | misc_feature | 556586 | 5 | - | 0.6 | |
yebA | BPEN_466 | conserved protein with LysM domain | chromosome | CDS | 555204 | 1359 | - | 0.303164 |
yebA | BPEN_466 | chromosome | misc_feature | 556496 | 1 | - | ||
yeeX | BPEN_475 | hypothetical protein | chromosome | CDS | 567109 | 324 | - | 0.280864 |
yeeX | BPEN_475 | chromosome | RBS | 567439 | 5 | - | 0.4 | |
yfaE | BPEN_496 | conserved hypothetical protein with 2Fe-2S ferredoxin-like domain | chromosome | CDS | 594258 | 291 | + | 0.274914 |
yfaE | BPEN_496 | chromosome | RBS | 594205 | 5 | + | 0.4 | |
yfcB | BPEN_515 | chromosome | RBS | 617726 | 5 | + | 0.4 | |
yfcB | BPEN_515 | N5-glutamine methyltransferase, modifies ribosomal protein L3 | chromosome | CDS | 617740 | 915 | + | 0.311475 |
yfgB | BPEN_552 | chromosome | misc_feature | 661810 | 1 | - | ||
yfgB | BPEN_552 | putative pyruvate formate lyase activating enzyme 2 | chromosome | CDS | 660713 | 1122 | - | 0.311052 |
yfgB | BPEN_552 | chromosome | misc_feature | 661820 | 5 | - | 0.4 | |
yfiO | BPEN_186 | putative lipoprotein | chromosome | CDS | 233191 | 744 | - | 0.264785 |
yfiO | BPEN_186 | chromosome | RBS | 233952 | 5 | - | 0.6 | |
yfjB | BPEN_565 | chromosome | RBS | 675577 | 5 | + | 0.4 | |
yfjB | BPEN_565 | probable inorganic polyphosphate/ATP-NAD kinase | chromosome | CDS | 675593 | 894 | + | 0.308725 |
yfjG | BPEN_567 | chromosome | misc_feature | 677401 | 5 | - | 0.4 | |
yfjG | BPEN_567 | hypothetical protein | chromosome | CDS | 676950 | 486 | - | 0.244856 |
yfjG | BPEN_567 | chromosome | misc_feature | 677396 | 1 | - | ||
ygbQ | BPEN_170 | cell division protein | chromosome | CDS | 218140 | 276 | + | 0.23913 |
ygbQ | BPEN_170 | chromosome | RBS | 218128 | 5 | + | 0.2 | |
ygdP | BPEN_272 | dinucleoside polyphosphate hydrolase | chromosome | CDS | 311330 | 477 | + | 0.331237 |
ygdP | BPEN_272 | chromosome | RBS | 311260 | 5 | + | 0.4 | |
ygfA | BPEN_264 | putative ligase | chromosome | CDS | 300664 | 612 | - | 0.300654 |
ygfE | BPEN_265 | chromosome | RBS | 301768 | 5 | - | 0.4 | |
ygfE | BPEN_265 | hypothetical protein | chromosome | CDS | 301417 | 345 | - | 0.327536 |
ygfZ | BPEN_268 | chromosome | RBS | 306107 | 5 | - | 0.4 | |
ygfZ | BPEN_268 | putative aminomethyltransferase | chromosome | CDS | 305107 | 993 | - | 0.286002 |
yggX | BPEN_255 | chromosome | RBS | 289888 | 5 | - | 0.6 | |
yggX | BPEN_255 | hypothetical protein | chromosome | CDS | 289623 | 255 | - | 0.254902 |
ygiH | BPEN_061 | chromosome | RBS | 73955 | 5 | - | 0.2 | |
ygiH | BPEN_061 | hypothetical protein | chromosome | CDS | 73289 | 588 | - | 0.341837 |
yhbG | BPEN_043 | putative transport protein (ABC superfamily, atp_bind) | chromosome | CDS | 52506 | 726 | - | 0.305785 |
yhbG | BPEN_043 | chromosome | RBS | 53315 | 5 | - | 0.4 | |
yhbN | BPEN_044 | chromosome | RBS | 53849 | 5 | - | 0.6 | |
yhbN | BPEN_044 | putative transport protein (ABC superfamily, peri_bind) | chromosome | CDS | 53277 | 510 | - | 0.262745 |
yhcB | BPEN_049 | hypothetical protein | chromosome | CDS | 60426 | 399 | - | 0.235589 |
yhcB | BPEN_049 | chromosome | RBS | 60832 | 5 | - | 0.6 | |
yhgN | BPEN_595 | putative integral membrane protein | chromosome | CDS | 715520 | 594 | + | 0.289562 |
yhgN | BPEN_595 | chromosome | RBS | 715508 | 5 | + | 0.4 | |
yhhF | BPEN_655 | chromosome | RBS | 786884 | 5 | + | 0.6 | |
yhhF | BPEN_655 | putative methyltransferase with SAM-dependent methyltransferase domain | chromosome | CDS | 786893 | 588 | + | 0.287415 |
yibN | BPEN_629 | chromosome | RBS | 751491 | 5 | - | 0.2 | |
yibN | BPEN_629 | putative Rhodanese-related sulfurtransferase | chromosome | CDS | 751030 | 450 | - | 0.271111 |
yicC | BPEN_639 | putative stress-induced protein | chromosome | CDS | 762965 | 882 | + | 0.277778 |
yidCD | BPEN_012 | hypothetical protein | chromosome | CDS | 12400 | 1917 | - | 0.28795 |
yidZ | BPEN_038 | chromosome | RBS | 49211 | 5 | - | 0.6 | |
yidZ | BPEN_038 | putative transcriptional regulator with periplasmic binding protein domain (LysR family) | chromosome | CDS | 48217 | 900 | - | 0.285556 |
yigB | BPEN_599 | chromosome | RBS | 721902 | 5 | - | 0.4 | |
yigB | BPEN_599 | putative hydrolase of the HAD superfamily | chromosome | CDS | 721179 | 717 | - | 0.305439 |
yigL | BPEN_596 | chromosome | RBS | 717411 | 5 | - | 0.4 | |
yigL | BPEN_596 | putative hydrolase of the HAD superfamily | chromosome | CDS | 716562 | 840 | - | 0.32381 |
yigN | BPEN_650 | chromosome | RBS | 780250 | 5 | - | 0.2 | |
yigN | BPEN_650 | hypothetical protein | chromosome | CDS | 778676 | 1569 | - | 0.288719 |
yihA | BPEN_644 | Probable GTP-binding protein | chromosome | CDS | 768897 | 600 | + | 0.298333 |
yihA | BPEN_644 | chromosome | RBS | 768832 | 5 | + | 0.4 | |
yjcE | BPEN_029 | putative sodium:hydrogen antiporter (CPA1 family) | chromosome | CDS | 35067 | 1644 | + | 0.354015 |
yjeE | BPEN_079 | chromosome | RBS | 94408 | 5 | + | 0.2 | |
yjeE | BPEN_079 | putative enzyme with nucleoside triP hydrolase domain | chromosome | CDS | 94487 | 489 | + | 0.325153 |
yjeP | BPEN_075 | hypothetical protein | chromosome | CDS | 88088 | 3393 | - | 0.289419 |
yjeP | BPEN_075 | chromosome | RBS | 91572 | 5 | - | 0.4 | |
yjgF | BPEN_031 | putative translation initiation inhibitor | chromosome | CDS | 39009 | 402 | - | 0.318408 |
yjgF | BPEN_031 | chromosome | RBS | 39418 | 5 | - | 0.4 | |
yjgP | BPEN_036 | chromosome | RBS | 45973 | 5 | + | 0.4 | |
yjgP | BPEN_036 | putative transmembrane protein, transport | chromosome | CDS | 45983 | 1122 | + | 0.248663 |
yjgQ | BPEN_037 | putative transmembrane protein, transport | chromosome | CDS | 47110 | 1074 | + | 0.278399 |
yjgQ | BPEN_037 | chromosome | RBS | 47038 | 5 | + | 0.6 | |
yoaE | BPEN_458 | putative transmembrane protein | chromosome | CDS | 544268 | 1557 | - | 0.328838 |
yoaE | BPEN_458 | chromosome | RBS | 545831 | 5 | - | 0.6 | |
yqeI | BPEN_401 | putative transcriptional regulator with C-terminal, effector domain of the bipartite response regulator | chromosome | CDS | 475612 | 639 | + | 0.316119 |
yqeI | BPEN_401 | chromosome | RBS | 475600 | 5 | + | 0.4 | |
yqgE | BPEN_258 | hypothetical protein | chromosome | CDS | 292368 | 585 | - | 0.350427 |
yqgE | BPEN_258 | chromosome | RBS | 293030 | 5 | - | 0.4 | |
yqgF | BPEN_257 | putative endonuclease involved in recombination | chromosome | CDS | 291941 | 435 | - | 0.337931 |
yqiC | BPEN_066 | chromosome | pseudo | 78951 | 289 | - | 0.176471 | |
yqjA | BPEN_055 | hypothetical protein | chromosome | CDS | 66815 | 567 | + | 0.296296 |
yqjA | BPEN_055 | chromosome | RBS | 66722 | 5 | + | 0.4 | |
yraL | BPEN_053 | chromosome | misc_feature | 64842 | 5 | + | 0.4 | |
yraL | BPEN_053 | hypothetical protein | chromosome | CDS | 64871 | 894 | + | 0.328859 |
yraL | BPEN_053 | chromosome | misc_feature | 64880 | 1 | + | ||
yraP | BPEN_052 | putative periplasmic protein | chromosome | CDS | 63709 | 591 | - | 0.291032 |
yraP | BPEN_052 | chromosome | RBS | 64309 | 5 | - | 0.4 | |
yrbA | BPEN_046 | putative transcriptional regulator (BolA family) | chromosome | CDS | 56953 | 270 | + | 0.281481 |
yrbK | BPEN_045 | chromosome | misc_feature | 54366 | 1 | - | ||
yrbK | BPEN_045 | possible exported protein | chromosome | CDS | 53764 | 618 | - | 0.263754 |
yrbK | BPEN_045 | chromosome | misc_feature | 54377 | 5 | - | 0.4 | |
yrdC | BPEN_227 | chromosome | misc_feature | 258809 | 1 | + | ||
yrdC | BPEN_227 | putative RNA-binding protein with unique protein fold, with YrdC/RibB domain | chromosome | CDS | 258767 | 585 | + | 0.347009 |
yrdC | BPEN_227 | chromosome | misc_feature | 258788 | 5 | + | 0.4 | |
ytfF | BPEN_315 | chromosome | RBS | 372677 | 5 | + | 0.2 | |
ytfF | BPEN_315 | putative cationic amino acid transport protein | chromosome | CDS | 372689 | 942 | + | 0.334395 |
ytfM | BPEN_092 | putative outer membrane protein | chromosome | CDS | 106992 | 1764 | + | 0.292517 |
ytfN | BPEN_093 | hypothetical protein | chromosome | CDS | 108751 | 3840 | + | 0.270573 |
ytfN | BPEN_093 | chromosome | RBS | 108739 | 5 | + | 0.6 | |
znuB | BPEN_042 | high-affinity Zn transport protein (ABC superfamily, membrane) | chromosome | CDS | 50887 | 861 | + | 0.307782 |
znuC | BPEN_041 | high-affinity Zn transport protein (ABC superfamily, atp_bind) | chromosome | CDS | 50149 | 648 | + | 0.334877 |
zur | BPEN_026 | transcriptional repressor of Zn transport system (Fur family) | chromosome | CDS | 31195 | 474 | - | 0.327004 |
zur | BPEN_026 | chromosome | RBS | 31673 | 5 | - | 0.4 | |
zwf | BPEN_464 | glucose-6-phosphate dehydrogenase | chromosome | CDS | 551437 | 1485 | - | 0.336027 |