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2024-06-01 23:41:47

Gene list

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COG category: Cell motility

Number of genes found: 3512

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
flgA BU336 flagella basal-body P-ring formation protein FlgA precursorchromosome CDS369604 681 - 0.259912
flgB BU337 flagellar basal-body rod protein FlgBchromosome CDS370621 348 + 0.212644
flgC BU338 flagellar basal-body rod protein FlgCchromosome CDS370977 411 + 0.294404
flgD BU339 basal-body rod modification protein FlgDchromosome CDS371399 711 + 0.278481
flgE BU340 flagellar hook protein FlgEchromosome CDS372150 1227 + 0.274654
flgF BU341 flagellar basal-body rod protein FlgFchromosome CDS373403 759 + 0.242424
flgG BU342 flagellar basal-body rod protein FlgGchromosome CDS374179 783 + 0.315453
flgH BU343 flagellar L-ring protein precursorchromosome CDS375045 717 + 0.298466
flgI BU344 flagellar P-ring protein precursorchromosome CDS375942 1158 + 0.278066
flgJ BU345 flagellar protein FlgJchromosome CDS377099 300 + 0.23
flgK BU346 flagellar hook-associated protein 1chromosome CDS377500 1632 + 0.254289
flgN BU335 flagella synthesis protein FlgNchromosome CDS369124 408 - 0.178922
flhA BU241 flagellar biosynthetic protein FlhAchromosome CDS269674 2091 + 0.288857
flhB BU240 flagellar biosynthetic protein FlhBchromosome CDS268530 1152 + 0.265625
fliE BU072 flagellar hook-basal body complex protein FliEchromosome CDS76514 297 - 0.222222
fliF BU073 flagellar M-ring proteinchromosome CDS77074 1638 + 0.2558
fliG BU074 flagellar motor switch protein FliGchromosome CDS78708 996 + 0.251004
fliH BU075 flagellar assembly protein FliHchromosome CDS79696 663 + 0.227753
fliI BU076 flagellum-specific ATP synthasechromosome CDS80316 1404 + 0.297009
fliJ BU077 flagellar FliJ proteinchromosome CDS81749 438 + 0.205479
fliK BU079 flagellar hook-length control proteinchromosome CDS82624 708 + 0.194915
fliM BU080 flagellar motor switch protein FliMchromosome CDS83392 948 + 0.207806
fliN BU081 flagellar motor switch protein FliNchromosome CDS84332 402 + 0.223881
fliP BU082 flagellar biosynthetic protein FliPchromosome CDS84745 1140 + 0.273684
fliQ BU083 flagellar biosynthetic protein FliQchromosome CDS85956 270 + 0.27037
fliR BU084 flagellar biosynthetic protein FliRchromosome CDS86225 777 + 0.229086
secG BU380 protein-export membrane protein SecGchromosome CDS420206 330 - 0.184848
 
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
flgB bbp310 flagellar basal-body rod protein Flgbchromosome CDS361919 411 + 0.22871
flgC bbp311 flagellar basal-body rod protein FlgCchromosome CDS362333 411 + 0.274939
flgF bbp312 flagellar basal-body rod protein FlgFchromosome CDS363437 789 + 0.240811
flgG bbp313 flagellar basal-body rod protein FlgGchromosome CDS364255 783 + 0.310345
flgH bbp314 flagellar L-ring protein precursorchromosome CDS365107 735 + 0.239456
flgI bbp315 flagellar P-ring protein precursorchromosome CDS365946 1128 + 0.268617
flgJ bbp316 flagellar protein FlgJ homologchromosome CDS367077 453 + 0.229581
flhA bbp223 flagellar biosynthesis protein FlhAchromosome CDS262535 2109 + 0.279279
flhB bbp222 flagellar biosynthetic protein FlhBchromosome CDS261394 1149 + 0.245431
fliE bbp067 flagellar hook-basal body complex protein FliEchromosome CDS75190 303 - 0.214521
fliF bbp068 flagellar M-ring proteinchromosome CDS75688 1668 + 0.254197
fliG bbp069 flagellar motor switch protein FliGchromosome CDS77360 963 + 0.21703
fliH bbp070 Flagellar assembly protein FliHchromosome CDS78353 678 + 0.246313
fliI bbp071 flagellum-specific ATP synthasechromosome CDS79027 1365 + 0.302564
fliM bbp074 flagellar motor switch protein FliMchromosome CDS82082 996 + 0.193775
fliN bbp075 flagellar motor switch protein FliNchromosome CDS83070 405 + 0.234568
fliOP bbp076 flagellar biosynthetic protein FliPchromosome CDS83536 1083 + 0.281625
fliQ bbp077 flagellar biosynthetic protein FliQchromosome CDS84702 273 + 0.263736
fliR bbp078 flagellar biosynthetic protein FliRchromosome CDS84974 774 + 0.222222
 
Buchnera aphidicola str. Cc (Cinara cedri), Cc
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
clpP BCc_293 ClpPchromosome CDS331724 603 + 0.232172
ffh BCc_245 Ffhchromosome CDS280008 1347 + 0.18337
flgF BCc_211 FlgFchromosome CDS244844 705 + 0.204255
flgI BCc_213 FlgIchromosome CDS246530 822 + 0.192214
flhA BCc_151 FlhAchromosome CDS179257 2100 + 0.19381
flhB BCc_150 FlhBchromosome CDS178132 1116 + 0.163082
fliH BCc_045 FliHchromosome CDS51357 690 + 0.152174
fliN BCc_047 FliNchromosome CDS54847 405 + 0.150617
fliP BCc_048 FliPchromosome CDS55416 735 + 0.209524
fliQ BCc_049 FliQchromosome CDS56190 267 + 0.194757
fliR BCc_050 FliRchromosome CDS56462 801 + 0.113608
ftsY BCc_015 FtsYchromosome CDS15068 1041 + 0.189241
lepA BCc_165 GTP-binding elongation factorchromosome CDS190867 1791 - 0.225572
lepB BCc_164 LepBchromosome CDS189989 858 - 0.13986
secA BCc_130 SecAchromosome CDS149470 2595 + 0.233141
secY BCc_321 SecYchromosome CDS358687 1296 - 0.212191
sppA BCc_171 SppAchromosome CDS199051 1866 - 0.187031
typA BCc_267 GTP-binding elongation factor family proteinchromosome CDS298730 1815 + 0.244628
 
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
flgA BUsg324 flagella basal body P-ring formation proteinchromosome CDS371025 669 - 0.255605
flgB BUsg325 flagellar basal-body rod protein FlgBchromosome CDS371945 402 + 0.221393
flgC BUsg326 flagellar basal-body rod protein FlgCchromosome CDS372351 411 + 0.255474
flgD BUsg327 basal-body rod modification protein FlgDchromosome CDS372773 681 + 0.265786
flgE BUsg328 flagellar hook protein FlgEchromosome CDS373509 1230 + 0.242276
flgF BUsg329 flagellar basal-body rod protein FlgFchromosome CDS374752 762 + 0.224409
flgG BUsg330 flagellar basal-body rod protein FlgGchromosome CDS375529 783 + 0.312899
flgH BUsg331 flagellar L-ring protein precursorchromosome CDS376389 717 + 0.285914
flgI BUsg332 flagellar P-ring protein precursorchromosome CDS377281 1128 + 0.274823
flgJ BUsg333 flagellar protein flgJchromosome CDS378408 321 + 0.211838
flgK BUsg334 flagellar hook-associated protein 1chromosome CDS378742 1635 + 0.236697
flhA BUsg236 flagellar protein FlhAchromosome CDS271187 2106 + 0.279202
flhB BUsg235 flagellar biosynthetic protein FlhBchromosome CDS270067 1146 + 0.255672
fliE BUsg066 flagellar hook-basal body complex protein FliEchromosome CDS77072 306 - 0.179739
fliF BUsg067 flagellar M-ring proteinchromosome CDS77554 1671 + 0.239976
fliG BUsg068 flagellar motor switch protein FliGchromosome CDS79221 996 + 0.217871
fliH BUsg069 flagellar assembly protein FliHchromosome CDS80209 666 + 0.1997
fliI BUsg070 flagellum-specific ATP synthasechromosome CDS80868 1368 + 0.303363
fliJ BUsg071 flagellar FliJ proteinchromosome CDS82270 459 + 0.163399
fliK BUsg072 flagellar hook-length control proteinchromosome CDS82721 1146 + 0.186736
fliM BUsg073 flagellar motor switch protein FliMchromosome CDS83971 936 + 0.184829
fliN BUsg074 flagellar motor switch protein FliNchromosome CDS84923 402 + 0.186567
fliP BUsg075 flagellar biosynthetic protein FliPchromosome CDS85330 1140 + 0.254386
fliQ BUsg076 flagellar biosynthetic protein FliQchromosome CDS86513 273 + 0.300366
fliR BUsg077 flagellar biosynthetic protein FliRchromosome CDS86785 777 + 0.212355
 
Enterobacteria phage Fels-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STM3138 putative methyl-accepting chemotaxis proteinchromosome CDS3300619 1059 - 0.430595
NA STM2742 putative cytoplasmic proteinchromosome CDS2880444 1194 + 0.416248
NA STM4595 putative fimbrial chaparonechromosome CDS4852849 546 - 0.501832
NA STM3216 putative methyl-accepting chemotaxis proteinchromosome CDS3380802 1566 - 0.505109
NA STM3152 putative methyl-accepting chemotaxis proteinchromosome CDS3314324 1644 - 0.571776
NA STM0282 hypothetical proteinchromosome CDS321111 1305 + 0.59387
NA STM1019 hypothetical proteinchromosome CDS1109305 234 + 0.461538
NA STM2621 hypothetical proteinchromosome CDS2765549 234 - 0.461538
NA STM2314 putative chemotaxis signal transduction proteinchromosome CDS2420643 1002 + 0.520958
NA STM2597 major tail-like proteinchromosome CDS2747033 747 - 0.56091
NA STM0307 VirG-like proteinchromosome CDS350943 408 - 0.470588
NA STM2721 capsid scaffold-like proteinchromosome CDS2863059 834 - 0.582734
NA STM1038 probable major tail proteinchromosome CDS1124410 750 + 0.508
NA STM0082 putative secreted proteinchromosome CDS94771 291 - 0.463918
NA STM0916 putative major tail proteinchromosome CDS987126 744 + 0.568548
NA STM1657 putative methyl-accepting chemotaxis proteinchromosome CDS1751277 1155 - 0.489177
NA STM2714 lysis-like proteinchromosome CDS2859028 429 - 0.608392
bcfA STM0021 fimbrial subunitchromosome CDS24469 543 + 0.517495
bcfB STM0022 fimbrial chaparonechromosome CDS25112 687 + 0.509461
bcfC STM0023 fimbrial usherchromosome CDS25803 2622 + 0.544622
bcfD STM0024 fimbrial subunitchromosome CDS28425 1008 + 0.500992
bcfE STM0025 fimbrial subunitchromosome CDS29433 546 + 0.494505
bcfF STM0026 fimbrial subunitchromosome CDS29994 519 + 0.55684
bcfG STM0027 fimbrial chaparonechromosome CDS30478 732 + 0.539617
cheA STM1921 chemotaxis sensory histidine protein kinasechromosome CDS2017178 2016 - 0.553075
cheB STM1917 chemotaxis-specific methylesterasechromosome CDS2012690 1050 - 0.558095
cheM STM1919 methyl accepting chemotaxis protein IIchromosome CDS2014756 1662 - 0.555355
cheR STM1918 glutamate methyltransferasechromosome CDS2013736 867 - 0.527105
cheW STM1920 chemotaxis docking proteinchromosome CDS2016654 504 - 0.531746
cheZ STM1915 chemotactic response proteinchromosome CDS2011628 645 - 0.573643
cpxP STM4060 periplasmic repressorchromosome CDS4270595 501 + 0.506986
csgA STM1144 major curlin subunit precursorchromosome CDS1231630 456 + 0.515351
fimA STM0543 fimbrinchromosome CDS604130 543 + 0.552486
fimC STM0545 periplasmic chaperonechromosome CDS605325 693 + 0.503608
fimD STM0546 outer membrane usher protein precursorchromosome CDS606048 2613 + 0.556831
fimF STM0548 putative fimbrial proteinchromosome CDS609692 519 + 0.55106
fimH STM0547 minor fimbrial subunitchromosome CDS608675 1008 + 0.516865
fimI STM0544 fimbrial proteinchromosome CDS604748 534 + 0.541198
flgA STM1173 flagellar basal body P-ring biosynthesis proteinchromosome CDS1257431 660 - 0.580303
flgB STM1174 flagellar basal body rod proteinchromosome CDS1258247 417 + 0.522782
flgC STM1175 flagellar basal body rod proteinchromosome CDS1258667 405 + 0.548148
flgD STM1176 flagellar basal body rod modification proteinchromosome CDS1259083 699 + 0.545064
flgE STM1177 flagellar hook proteinchromosome CDS1259808 1212 + 0.55363
flgF STM1178 cell-proximal portion of basal-body rodchromosome CDS1261040 756 + 0.607143
flgG STM1179 flagellar basal-body rod proteinchromosome CDS1261809 783 + 0.564496
flgH STM1180 flagellar L-ring protein precursorchromosome CDS1262646 699 + 0.543634
flgI STM1181 flagellar P-ring protein precursorchromosome CDS1263356 1098 + 0.576503
flgJ STM1182 flagellar biosynthesis proteinchromosome CDS1264453 951 + 0.562566
flgK STM1183 flagellar hook-associated proteinchromosome CDS1265468 1662 + 0.518051
flgL STM1184 flagellar hook-associated proteinchromosome CDS1267144 954 + 0.536688
flgM STM1172 anti-FliA factorchromosome CDS1257046 294 - 0.517007
flgN STM1171 putative FlgK/FlgL export chaperonechromosome CDS1256619 423 - 0.536643
flhA STM1913 flagellar biosynthesis proteinchromosome CDS2008212 2079 - 0.559885
flhB STM1914 flagellar biosynthesis proteinchromosome CDS2010283 1152 - 0.559028
fliC STM1959 flagellar biosynthesis proteinchromosome CDS2047658 1488 - 0.491935
fliD STM1960 flagellar hook-associated proteinchromosome CDS2049402 1404 + 0.49359
fliE STM1968 flagellar basal body proteinchromosome CDS2056008 315 - 0.568254
fliF STM1969 flagellar M-ring proteinchromosome CDS2056539 1683 + 0.571598
fliG STM1970 flagellar motor proteinchromosome CDS2058214 996 + 0.553213
fliH STM1971 flagellar assembly proteinchromosome CDS2059202 708 + 0.60452
fliI STM1972 flagellum-specific ATP synthasechromosome CDS2059909 1371 + 0.60248
fliJ STM1973 flagellar proteinchromosome CDS2061301 444 + 0.513514
fliK STM1974 flagellar hook-length control proteinchromosome CDS2061741 1218 + 0.614943
fliL STM1975 flagellar biosynthesis proteinchromosome CDS2063063 468 + 0.547009
fliM STM1976 flagellar motor switch proteinchromosome CDS2063535 1005 + 0.534328
fliN STM1977 flagellar motor switch proteinchromosome CDS2064536 414 + 0.548309
fliO STM1978 flagellar biosynthetic proteinchromosome CDS2064949 378 + 0.60582
fliP STM1979 flagellar biosynthesis proteinchromosome CDS2065326 738 + 0.536585
fliQ STM1980 flagellar biosynthesis proteinchromosome CDS2066073 270 + 0.518519
fliR STM1981 flagellar biosynthesis proteinchromosome CDS2066351 795 + 0.515723
fliS STM1961 flagellar protein FliSchromosome CDS2050820 408 + 0.5
fljB STM2771 flagellar biosynthesis proteinchromosome CDS2913230 1521 - 0.506903
hofB STM0143 putative type IV fimbrial biosynthetic proteinchromosome CDS166319 1386 - 0.554834
hofC STM0142 putative type IV pilin assembly proteinchromosome CDS165127 1203 - 0.544472
hopD STM3442 leader peptidase HopDchromosome CDS3596910 468 + 0.529915
invC STM2894 type III secretion system ATPasechromosome CDS3036677 1296 - 0.542438
invG STM2898 outer membrane secretin precursorchromosome CDS3041597 1689 - 0.46418
lpfA STM3640 long polar fimbrial protein A precursorchromosome CDS3827449 537 - 0.463687
lpfB STM3639 long polar fimbrial chaperone precursorchromosome CDS3826666 699 - 0.447783
lpfC STM3638 long polar fimbrial outer membrane usher proteinchromosome CDS3824115 2529 - 0.553578
lpfE STM3636 long polar fimbrial minor proteinchromosome CDS3822485 528 - 0.511364
motA STM1923 flagellar motor proteinchromosome CDS2020124 888 - 0.512387
motB STM1922 flagellar motor proteinchromosome CDS2019198 930 - 0.545161
orgB STM2869 needle complex export proteinchromosome CDS3013788 681 - 0.450808
ppdA STM3000 prepilin peptidase-dependent protein Achromosome CDS3157362 471 - 0.56051
ppdD STM0144 putative type IV pilin major componentchromosome CDS167714 438 - 0.53653
safB STM0300 putative fimbrial assembly chaparonechromosome CDS342829 714 + 0.488796
safC STM0301 putative fimbrial usherchromosome CDS343566 2511 + 0.546794
sipB STM2885 translocation machinery componentchromosome CDS3029114 1782 - 0.523008
spaO STM2891 type III secretion proteinchromosome CDS3034335 912 - 0.527412
spaS STM2887 type III secretion proteinchromosome CDS3031533 1071 - 0.43324
spy STM1308 putative stress response proteinchromosome CDS1388557 486 + 0.5
ssaC STM1394 outer membrane secretin precursorchromosome CDS1480402 1494 + 0.423025
ssaN STM1415 type III secretion system ATPasechromosome CDS1495691 1302 + 0.512289
ssaQ STM1418 type III secretion proteinchromosome CDS1497708 969 + 0.46646
sseB STM1398 translocation machinery componentchromosome CDS1483934 591 + 0.433164
stbA STM0340 putative fimbrial major subunitchromosome CDS384403 537 - 0.471136
stbB STM0339 putative fimbrial chaperonechromosome CDS383580 762 - 0.454068
stbC STM0338 putative fimbrial usherchromosome CDS381035 2562 - 0.539422
stbE STM0336 putative fimbrial chaparonechromosome CDS378981 759 - 0.476943
stcB STM2151 putative periplasmic chaperone proteinchromosome CDS2246358 684 - 0.402047
stcC STM2150 putative outer membrane proteinchromosome CDS2243855 2490 - 0.457831
stdA STM3029.S putative fimbrial-like proteinchromosome CDS3191120 561 - 0.527629
stdB STM3028 putative outer membrane usher proteinchromosome CDS3188511 2490 - 0.607229
stdC STM3027 putative fimbrial chaparonechromosome CDS3187727 744 - 0.58871
stfA STM0195 putative fimbrial subunitchromosome CDS230657 561 + 0.520499
stfC STM0196 putative fimbrial outer membrane usherchromosome CDS231303 2658 + 0.549661
stfD STM0197 putative periplasmic fimbrial chaperonechromosome CDS233978 753 + 0.541833
sthA STM4594 putative fimbrial chaparonechromosome CDS4852095 684 - 0.461988
sthB STM4593 putative fimbrial usher proteinchromosome CDS4849512 2538 - 0.472025
sthD STM4592 putative fimbrial subunitchromosome CDS4848937 558 - 0.505376
sthE STM4591 putative major fimbrial subunitchromosome CDS4847811 1086 - 0.524862
stiA STM0177 putative fimbrial subunitchromosome CDS208383 540 - 0.524074
stiB STM0176 putative fimbrial chaparonechromosome CDS207652 684 - 0.530702
stiC STM0175 putativie fimbrial usherchromosome CDS205079 2547 - 0.553592
stjB STM4572 putative fimbrial usher proteinchromosome CDS4826467 2409 - 0.493566
stjC STM4573 putative fimbrial chaparonechromosome CDS4828889 708 - 0.456215
tcp STM3577 methyl-accepting transmembrane citrate/phenol chemoreceptorchromosome CDS3744842 1644 + 0.556569
trg STM1626 methyl-accepting chemotaxis protein IIIchromosome CDS1715879 1626 - 0.541205
tsr STM4533 methyl-accepting chemotaxis protein Ichromosome CDS4790082 1662 + 0.551745
yaiU STM0373 flagellar proteinchromosome CDS425165 2937 + 0.462377
yggR STM3099 twitching motility proteinchromosome CDS3259946 981 - 0.572885
yifL STM3946 putative outer membrane lipoproteinchromosome CDS4152022 204 + 0.534314
yrfC STM3491 putative inner membrane proteinchromosome CDS3645214 540 - 0.592593
 
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA0578 hypothetical proteinchromosome CDS640710 1425 + 0.519298
NA ECA0091 methyl-accepting chemotaxis proteinchromosome CDS107366 1893 - 0.485473
NA ECA0182 methyl-accepting chemotaxis proteinchromosome CDS202590 1629 + 0.523634
NA ECA3592 methyl-accepting chemotaxis proteinchromosome CDS4037846 1587 - 0.531821
NA ECA1332 methyl-accepting chemotaxis proteinchromosome CDS1508540 1668 + 0.518585
NA ECA3642 methyl-accepting chemotaxis proteinchromosome CDS4090959 1656 + 0.57186
NA ECA4333 methyl-accepting chemotaxis proteinchromosome CDS4851698 1671 + 0.515859
NA ECA0794 putative type IV pilus proteinchromosome CDS868800 960 + 0.585417
NA ECA2226 methyl-accepting chemotaxis proteinchromosome CDS2528725 1836 + 0.529412
NA ECA1321 hypothetical proteinchromosome CDS1495196 681 - 0.471366
NA ECA2579 putative methyl-accepting chemotaxis citrate transducerchromosome CDS2910808 1935 + 0.500775
NA ECA3624 methyl-accepting chemotaxis proteinchromosome CDS4071959 1572 + 0.534351
NA ECA1105 putative methyl-accepting chemotaxis proteinchromosome CDS1251539 1791 + 0.525963
NA ECA0941 putative fimbrial chaperonechromosome CDS1054020 750 - 0.505333
NA ECA4120 methyl-accepting chemotaxis proteinchromosome CDS4594503 1662 + 0.555355
NA ECA2317 methyl-accepting chemotaxis proteinchromosome CDS2621870 1797 + 0.483027
NA ECA3222 hypothetical proteinchromosome CDS3605517 738 - 0.501355
NA ECA0939 putative fimbrial proteinchromosome CDS1052370 570 - 0.492982
NA ECA0942 putative outer membrane usher proteinchromosome CDS1054808 2493 - 0.519856
NA ECA2622 capsid scaffolding protein Ochromosome CDS2953289 834 - 0.541966
NA ECA0943 fimbriae major subunit proteinchromosome CDS1057442 549 - 0.460838
NA ECA3076 putative fimbrial usher proteinchromosome CDS3432966 2382 + 0.538623
NA ECA3683 hypothetical proteinchromosome CDS4133069 1014 + 0.534517
NA ECA0390 methyl-accepting chemotaxis proteinchromosome CDS440934 1620 + 0.520988
NA ECA1568 putative chemotaxis signal transduction proteinchromosome CDS1825190 972 + 0.479424
NA ECA3075 putative fimbrial chaperonechromosome CDS3432149 774 + 0.527132
NA ECA4098 hypothetical proteinchromosome CDS4566236 852 - 0.537559
NA ECA3838 methyl-accepting chemotaxis proteinchromosome CDS4289237 1620 - 0.49321
NA ECA1281 methyl-accepting chemotaxis proteinchromosome CDS1455488 1671 + 0.509874
NA ECA3902 methyl-accepting chemotaxis proteinchromosome CDS4367239 1728 - 0.510417
NA ECA3718 conserved hypothetical phage-related proteinchromosome CDS4158788 546 + 0.582418
NA ECA0434 methyl-accepting chemotaxis proteinchromosome CDS495149 1950 - 0.538974
NA ECA0080 methyl-accepting chemotaxis proteinchromosome CDS94276 1953 + 0.488479
NA ECA2712 putative methyl-accepting chemotaxis proteinchromosome CDS3046666 1683 - 0.513963
NA ECA0570 hypothetical proteinchromosome CDS632961 1533 + 0.522505
NA ECA4335 methyl-accepting chemotaxis proteinchromosome CDS4856341 1647 + 0.51609
NA ECA4332 methyl-accepting chemotaxis proteinchromosome CDS4849738 1680 + 0.55
NA ECA4334 methyl-accepting chemotaxis proteinchromosome CDS4854078 1671 + 0.536206
NA ECA3615 putative methyl-accepting chemotaxis proteinchromosome CDS4062200 1941 + 0.516744
NA ECA1509 methyl-accepting chemotaxis proteinchromosome CDS1754695 1680 + 0.523214
NA ECA0658 hypothetical proteinchromosome CDS731959 489 + 0.498978
NA ECA0436 methyl-accepting chemotaxis proteinchromosome CDS500719 1578 - 0.513942
NA ECA3626 putative type II/IV secretion system proteinchromosome CDS4075862 1017 - 0.559489
NA ECA3733 putative phage-related proteinchromosome CDS4172818 885 + 0.564972
NA ECA2061 methyl-accepting chemotaxis proteinchromosome CDS2346979 1527 - 0.48592
NA ECA3681 hypothetical proteinchromosome CDS4130795 1332 + 0.546547
NA ECA4097 hypothetical proteinchromosome CDS4565664 570 - 0.522807
NA ECA3245 methyl-accepting chemotaxis proteinchromosome CDS3627365 1668 - 0.490408
NA ECA2580 putative methyl-accepting chemotaxis citrate transducerchromosome CDS2913047 1941 + 0.493045
NA ECA2872 putative flagellinchromosome CDS3213661 1455 + 0.52646
NA ECA2530 methyl-accepting chemotaxis proteinchromosome CDS2846431 1560 - 0.521795
NA ECA2163 autotransporterchromosome CDS2466052 1962 + 0.555046
NA ECA3779 hypothetical proteinchromosome CDS4221890 567 + 0.500882
NA ECA1774 methyl-accepting chemotaxis proteinchromosome CDS2018184 1665 + 0.466667
NA ECA0183 methyl-accepting chemotaxis proteinchromosome CDS204906 1662 + 0.520457
NA ECA1667 putative type IV pilin protein precursorchromosome CDS1915724 558 + 0.342294
cheA ECA1689 chemotaxis proteinchromosome CDS1937404 2001 + 0.482759
cheB ECA1693 chemotaxis-specific methylesterasechromosome CDS1943163 1053 + 0.497626
cheD ECA1691 methyl-accepting chemotaxis proteinchromosome CDS1940069 1686 + 0.466192
cheR ECA1692 chemotaxis protein methyltransferasechromosome CDS1942291 873 + 0.471936
cheW ECA1690 chemotaxis proteinchromosome CDS1939436 498 + 0.467871
cheZ ECA1695 chemotaxis proteinchromosome CDS1944653 645 + 0.482171
cpxP ECA4310 putative stress resistance proteinchromosome CDS4828523 525 - 0.508571
flgA ECA1701 flagellar basal body P-ring biosynthesis proteinchromosome CDS1950142 669 - 0.490284
flgB ECA1702 flagellar basal body rod proteinchromosome CDS1950974 417 + 0.513189
flgC ECA1703 flagellar basal body rod proteinchromosome CDS1951419 405 + 0.51358
flgD ECA1704 basal-body rod modification proteinchromosome CDS1951839 675 + 0.49037
flgE ECA1705 flagellar hook proteinchromosome CDS1952589 1218 + 0.472906
flgF ECA1706 flagellar basal-body rod proteinchromosome CDS1953828 756 + 0.513228
flgG ECA1707 flagellar basal-body rod proteinchromosome CDS1954611 783 + 0.475096
flgH ECA1708 flagellar L-ring protein precursorchromosome CDS1955568 720 + 0.481944
flgI ECA1709 flagellar P-ring protein precursorchromosome CDS1956304 1110 + 0.501802
flgJ ECA1710 flagellar biosynthesis proteinchromosome CDS1957413 963 + 0.49325
flgK ECA1711 flagellar hook-associated proteinchromosome CDS1958502 1707 + 0.459285
flgL ECA1712 flagellar hook-associated proteinchromosome CDS1960240 954 + 0.455975
flgM ECA1700 negative regulator of flagellin synthesischromosome CDS1949704 297 - 0.451178
flgN ECA1699 flagella synthesis proteinchromosome CDS1949261 438 - 0.456621
flhA ECA1697 flagellar biosynthesis proteinchromosome CDS1946687 2085 + 0.48777
flhB ECA1696 flagellar biosynthesis proteinchromosome CDS1945543 1152 + 0.469618
fliC ECA1731 flagellinchromosome CDS1975728 873 + 0.482245
fliD ECA1730 flagellar hook-associated proteinchromosome CDS1974065 1419 - 0.424242
fliE ECA1727 flagellar basal body proteinchromosome CDS1972671 315 + 0.48254
fliF ECA1726 flagellar M-ring proteinchromosome CDS1970686 1725 - 0.510145
fliG ECA1725 flagellar motor proteinchromosome CDS1969697 993 - 0.506546
fliH ECA1724 flagellar assembly proteinchromosome CDS1968982 723 - 0.522822
fliI ECA1723 flagellum-specific ATP synthasechromosome CDS1967612 1374 - 0.516012
fliJ ECA1722 flagellar proteinchromosome CDS1967157 447 - 0.46085
fliK ECA1721 flagellar hook-length control proteinchromosome CDS1965862 1299 - 0.493457
fliL ECA1720 flagellar biosynthesis proteinchromosome CDS1965227 486 - 0.487654
fliM ECA1719 flagellar motor switch proteinchromosome CDS1964208 1014 - 0.465483
fliN ECA1718 flagellar motor switch proteinchromosome CDS1963802 414 - 0.492754
fliO ECA1717 flagellar proteinchromosome CDS1963380 423 - 0.463357
fliP ECA1716 flagellar biosynthesis proteinchromosome CDS1962607 777 - 0.481338
fliQ ECA1715 flagellar biosynthesis proteinchromosome CDS1962317 270 - 0.485185
fliR ECA1714 flagellar biosynthesis proteinchromosome CDS1961529 786 - 0.458015
fliS ECA1729 flagellar protein FliSchromosome CDS1973615 411 - 0.486618
hofB ECA3799 protein transport proteinchromosome CDS4246629 1473 + 0.545825
hofC ECA3800 protein transport proteinchromosome CDS4248098 1206 + 0.515755
hrcC ECA2100 type III secretion proteinchromosome CDS2386393 2070 + 0.578261
hrcN ECA2083 type III secretion proteinchromosome CDS2370621 1371 - 0.615609
hrcQ ECA2080 type III secretion proteinchromosome CDS2368462 1218 - 0.582102
hrpW ECA2112 type III effector proteinchromosome CDS2398528 1440 - 0.55625
motA ECA1687 flagellar motor proteinchromosome CDS1935437 888 + 0.476351
motB ECA1688 flagellar motor proteinchromosome CDS1936321 1056 + 0.464962
outD ECA3109 general secretion pathway protein Dchromosome CDS3468183 1953 - 0.523297
outE ECA3108 general secretion pathway protein Echromosome CDS3466690 1497 - 0.554442
outF ECA3107 general secretion pathway protein Fchromosome CDS3465462 1227 - 0.551752
outG ECA3106 general secretion pathway protein Gchromosome CDS3464954 441 - 0.521542
outH ECA3105 general secretion pathway protein Hchromosome CDS3464313 567 - 0.537919
outI ECA3104 general secretion pathway protein Ichromosome CDS3463951 366 - 0.557377
outO ECA3098 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3458845 849 - 0.551237
pilN ECA0534 putative Type IV pilus proteinchromosome CDS606013 1665 + 0.518318
pilQ ECA0538 putative Type IV pilus nucleotide-binding proteinchromosome CDS609487 1560 + 0.553205
pilU ECA0543 putative prepilin peptidasechromosome CDS613398 660 + 0.530303
ppdD ECA3798 prepilin peptidase dependent protein Dchromosome CDS4246180 447 + 0.530201
trg ECA1683 methyl-accepting chemotaxis proteinchromosome CDS1930573 1722 - 0.473868
virB11 ECA1613 putative conjugal transfer proteinchromosome CDS1867875 1017 - 0.515241
virB5 ECA1619 putative conjugal transfer proteinchromosome CDS1873390 729 - 0.474623
 
Escherichia coli 536, 536
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECP_1883 flagellar biosynthetic protein FliQchromosome CDS1927542 270 + 0.511111
NA ECP_2944 hypothetical protein YggRchromosome CDS3111908 981 - 0.552497
NA ECP_1829 chemotaxis protein methyltransferasechromosome CDS1879507 861 - 0.541231
NA ECP_1872 flagellar M-ring proteinchromosome CDS1918155 1659 + 0.548523
NA ECP_0386 choline dehydrogenasechromosome CDS408236 1716 - 0.568765
NA ECP_2100 tyrosine-protein kinase wzcchromosome CDS2171331 2163 - 0.529357
NA ECP_1831 chemotaxis protein CheWchromosome CDS1882464 504 - 0.519841
NA ECP_3519 hypothetical outer membrane usher proteinchromosome CDS3675350 2595 - 0.419653
NA ECP_2103 hypothetical proteinchromosome CDS2175743 1584 + 0.526515
NA ECP_1828 protein-glutamate methylesterasechromosome CDS1878455 1050 - 0.535238
NA ECP_0297 F1C minor fimbrial subunit F precursorchromosome CDS315887 525 + 0.468571
NA ECP_1072 flagellar P-ring protein precursorchromosome CDS1127154 1098 + 0.542805
NA ECP_3040 hypothetical type II secretion protein GspJchromosome CDS3200060 606 - 0.559406
NA ECP_3162 aerotaxis receptorchromosome CDS3329117 1521 - 0.548981
NA ECP_0298 F1C minor fimbrial subunit protein G presursorchromosome CDS316433 492 + 0.410569
NA ECP_0926 tetraacyldisaccharide 4'-kinasechromosome CDS978924 987 + 0.552178
NA ECP_3044 hypothetical type II secretion protein GspFchromosome CDS3202069 1224 - 0.586601
NA ECP_1068 flagellar hook protein FlgEchromosome CDS1123457 1206 + 0.510779
NA ECP_1065 flagellar basal-body rod protein FlgBchromosome CDS1121901 417 + 0.529976
NA ECP_0603 probable outer membrane efflux proteinchromosome CDS633119 1383 + 0.515546
NA ECP_0546 hypothetical proteinchromosome CDS576659 303 + 0.422442
NA ECP_3815 CS12 fimbria chaperone protein precursorchromosome CDS3984966 453 + 0.373068
NA ECP_0554 hypothetical proteinchromosome CDS584265 459 - 0.577342
NA ECP_1069 flagellar basal-body rod protein FlgFchromosome CDS1124682 756 + 0.59127
NA ECP_2970 fimbrial usher protein PixCchromosome CDS3135091 2571 - 0.540257
NA ECP_3416 putative general secretion pathway protein G precursorchromosome CDS3570673 438 + 0.493151
NA ECP_4541 PapAchromosome CDS4753507 618 - 0.462783
NA ECP_3041 hypothetical type II secretion protein GspIchromosome CDS3200662 372 - 0.567204
NA ECP_4683 methyl-accepting chemotaxis protein Ichromosome CDS4886181 1665 + 0.545946
NA ECP_3783 putative F17-like fimbrial usherchromosome CDS3961785 2535 - 0.424063
NA ECP_4581 putative hemolysin activator HlyBchromosome CDS4792737 1767 - 0.568195
NA ECP_1880 flagellar motor switch protein FliNchromosome CDS1926014 414 + 0.560386
NA ECP_3039 hypothetical type II secretion protein GspKchromosome CDS3199086 978 - 0.55726
NA ECP_1047 lipid A biosynthesis lauroyl acyltransferasechromosome CDS1106542 921 - 0.534202
NA ECP_3520 putative fimbrial chaperone proteinchromosome CDS3677981 753 - 0.38247
NA ECP_1071 flagellar L-ring protein precursorchromosome CDS1126435 708 + 0.528249
NA ECP_0025 lipoprotein signal peptidasechromosome CDS26750 495 + 0.523232
NA ECP_3543 SN-glycerol-3-phosphate transport ATP-binding protein UgpCchromosome CDS3706518 1071 - 0.576097
NA ECP_1875 flagellum-specific ATP synthasechromosome CDS1921480 1374 + 0.583697
NA ECP_0108 prepilin peptidase dependent protein D precursorchromosome CDS118308 441 - 0.526077
NA ECP_3516 putative fimbrial chaperone precursorchromosome CDS3673519 780 - 0.392308
NA ECP_2148 hypothetical fimbrial chaperone YehC precursorchromosome CDS2231422 675 - 0.388148
NA ECP_3784 putative F17-like fimbrial chaperonechromosome CDS3964327 726 - 0.414601
NA ECP_0150 chaperone protein EcpD precursorchromosome CDS160901 741 - 0.448043
NA ECP_3043 hypothetical type II secretion proteinchromosome CDS3201597 456 - 0.519737
NA ECP_1322 possible protease SohBchromosome CDS1352440 1050 + 0.501905
NA ECP_2404 putative acyltransferasechromosome CDS2519073 921 + 0.513572
NA ECP_1871 flagellar hook-basal body complex protein FliEchromosome CDS1917626 315 - 0.549206
NA ECP_1859 flagellar protein FliSchromosome CDS1908138 411 + 0.486618
NA ECP_1371 hypothetical ABC transporterchromosome CDS1402640 741 + 0.495277
NA ECP_1075 flagellar hook-associated protein 3chromosome CDS1130913 954 + 0.506289
NA ECP_3529 putative DNA processing proteinchromosome CDS3691608 1296 - 0.505401
NA ECP_3812 CS12 fimbria chaperone FasB-like proteinchromosome CDS3981285 702 + 0.457265
NA ECP_1833 chemotaxis MotB proteinchromosome CDS1884957 927 - 0.528587
NA ECP_4650 fimbrin-like protein fimI precursorchromosome CDS4848867 639 + 0.505477
NA ECP_0100 preprotein translocase secA subunitchromosome CDS109597 2706 + 0.519217
NA ECP_0295 F1C periplasmic chaperonechromosome CDS312475 696 + 0.449713
NA ECP_1882 flagellar biosynthetic protein FliP precursorchromosome CDS1926795 738 + 0.53794
NA ECP_3415 putative general secretion pathway protein Fchromosome CDS3569467 1197 + 0.507101
NA ECP_3282 hypothetical ABC transporter ATP-binding protein YrbFchromosome CDS3449564 810 - 0.546914
NA ECP_4536 PapK fimbrial adapter precursorchromosome CDS4748312 537 - 0.541899
NA ECP_3518 putative minor fimbrial subunit precursorchromosome CDS3674787 564 - 0.382979
NA ECP_3785 F17 fimbrial protein precursorchromosome CDS3965110 552 - 0.396739
NA ECP_2177 hypothetical outer-membrane lipoprotein YohG precursorchromosome CDS2268171 1518 - 0.544137
NA ECP_1918 hypothetical proteinchromosome CDS1958515 276 - 0.431159
NA ECP_3418 probable general secretion pathway protein I precursorchromosome CDS3571585 435 + 0.487356
NA ECP_1799 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferasechromosome CDS1851073 972 - 0.50823
NA ECP_3046 hypothetical type II secretion protein GspDchromosome CDS3204785 2061 - 0.547307
NA ECP_1826 chemotaxis protein CheZchromosome CDS1877396 645 - 0.534884
NA ECP_1858 flagellar hook-associated protein 2chromosome CDS1906707 1407 + 0.518124
NA ECP_2969 PixD proteinchromosome CDS3134291 873 - 0.501718
NA ECP_1877 flagellar hook-length control proteinchromosome CDS1923312 1128 + 0.54344
NA ECP_3419 probable general secretion pathway protein J precursorchromosome CDS3572012 588 + 0.501701
NA ECP_1857 flagellinchromosome CDS1904774 1668 - 0.480815
NA ECP_3373 hypothetical protein Smfchromosome CDS3542077 1125 - 0.508444
NA ECP_0258 flagellar biosynthetic protein FlhAchromosome CDS279682 1740 - 0.575287
NA ECP_1873 flagellar motor switch protein FliGchromosome CDS1919806 996 + 0.561245
NA ECP_4654 FimG protein precursorchromosome CDS4853522 504 + 0.529762
NA ECP_0294 putative minor F1C fimbrial subunit precursorchromosome CDS311895 540 + 0.501852
NA ECP_1370 hypothetical ABC transporterchromosome CDS1402297 336 + 0.497024
NA ECP_3814 CS12 fimbria outer membrane usher protein precursorchromosome CDS3982471 2508 + 0.441786
NA ECP_0106 bacterial type II secretion system protein Fchromosome CDS115721 1203 - 0.524522
NA ECP_1499 putative truncated fimbrial usher proteinchromosome CDS1549507 837 - 0.451613
NA ECP_4253 maltose/maltodextrin transport ATP-binding protein Malkchromosome CDS4460385 1116 + 0.548387
NA ECP_1067 basal-body rod modification protein FlgDchromosome CDS1122737 696 + 0.538793
NA ECP_4321 putative outer membrane efflux proteinchromosome CDS4532289 1467 - 0.558282
NA ECP_3070 hypothetical ATP-binding protein YghSchromosome CDS3235164 699 - 0.500715
NA ECP_1346 probable outer membrane efflux lipoproteinchromosome CDS1379555 1374 + 0.537846
NA ECP_3037 hypothetical type II secretion protein GspMchromosome CDS3197373 537 - 0.534451
NA ECP_1066 flagellar basal-body rod protein FlgCchromosome CDS1122321 405 + 0.530864
NA ECP_4651 chaperone protein FimC precursorchromosome CDS4849611 657 + 0.449011
NA ECP_4002 hypothetical protein YifLchromosome CDS4177397 204 + 0.529412
NA ECP_3038 hypothetical type II secretion proteinchromosome CDS3197911 1170 - 0.57094
NA ECP_1879 flagellar motor switch protein FliMchromosome CDS1924968 1050 + 0.525714
NA ECP_1878 flagellar FliL proteinchromosome CDS1924544 465 + 0.533333
NA ECP_2838 prepilin peptidase dependent protein A precursorchromosome CDS2994361 471 - 0.543524
NA ECP_1884 flagellar biosynthetic protein FliRchromosome CDS1927820 786 + 0.47201
NA ECP_0107 general secretion pathway protein Echromosome CDS116913 1386 - 0.534632
NA ECP_1074 flagellar hook-associated protein 1chromosome CDS1129258 1644 + 0.52129
NA ECP_1832 chemotaxis protein CheAchromosome CDS1882988 1959 - 0.529352
NA ECP_4053 Sec-independent protein translocase protein TatCchromosome CDS4228693 777 + 0.516088
NA ECP_3521 putative major fimbrial subunit precursorchromosome CDS3678834 705 - 0.478014
NA ECP_1689 spheroplast protein Y precursorchromosome CDS1737806 486 - 0.510288
NA ECP_3414 probable general secretion pathway protein Echromosome CDS3567989 1482 + 0.520918
NA ECP_0151 hypothetical fimbrial-like protein YadN precursorchromosome CDS161750 591 - 0.436548
NA ECP_1825 flagellar biosynthetic protein FlhBchromosome CDS1876039 1149 - 0.552655
NA ECP_3557 cell division protein FtsYchromosome CDS3721156 1497 - 0.535738
NA ECP_3413 probable general secretion pathway protein D precursorchromosome CDS3566015 1965 + 0.498219
NA ECP_3811 putative CS12 fimbria-like major fimbrial protein subunitchromosome CDS3980576 654 + 0.437309
NA ECP_1830 methyl-accepting chemotaxis protein IIchromosome CDS1880658 1662 - 0.521059
NA ECP_4539 outer membrane usher protein PapC precursorchromosome CDS4750281 2523 - 0.524376
NA ECP_1170 minor capsid protein Cchromosome CDS1211796 1320 + 0.606818
NA ECP_1073 peptidoglycan hydrolase FlgJchromosome CDS1128221 972 + 0.536008
NA ECP_0748 TolQ proteinchromosome CDS790535 684 + 0.501462
NA ECP_2376 hypothetical outer membrane usher protein YfcU precursorchromosome CDS2484462 2655 - 0.54162
NA ECP_1824 flagellar biosynthesis protein FlhAchromosome CDS1873968 2079 - 0.544974
NA ECP_0293 S-fimbrial protein subunit precursorchromosome CDS311279 546 + 0.424908
NA ECP_3127 outer membrane protein TolC precursorchromosome CDS3293181 1482 + 0.512146
NA ECP_1070 flagellar basal-body rod protein FlgGchromosome CDS1125609 783 + 0.536398
NA ECP_4538 chaperone protein PapDchromosome CDS4749476 735 - 0.454422
NA ECP_1876 flagellar FliJ proteinchromosome CDS1922872 444 + 0.522523
NA ECP_0296 F1C fimbrial usherchromosome CDS313241 2631 + 0.522235
NA ECP_0547 putative HTH-type transcriptional regulator YbaQchromosome CDS576997 342 + 0.447368
NA ECP_4652 outer membrane usher protein FimD precursorchromosome CDS4850333 2637 + 0.482746
NA ECP_3425 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3577170 678 + 0.50295
 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_612 hypothetical proteinchromosome CDS1607910 285 - 0.526316
NA APECO1_2026 putative protease/scaffold proteinchromosome CDS5028569 2178 + 0.517906
NA APECO1_2112 FimF protein precursorchromosome CDS4928715 534 + 0.490637
NA APECO1_1182 hypothetical proteinchromosome CDS2274092 1050 + 0.380952
NA APECO1_632 outer membrane usher protein FimD precursorchromosome CDS1637395 2652 - 0.442308
NA APECO1_2279 putative hemolysin activator proteinchromosome CDS4744842 411 + 0.510949
NA APECO1_451 putative outer membrane channel proteinchromosome CDS1415309 1374 + 0.537846
NA APECO1_3370 hypothetical proteinchromosome CDS3486433 564 + 0.443262
NA APECO1_3031 fimbrial chaperone protein precursorchromosome CDS3857029 780 - 0.380769
NA APECO1_569 hypothetical proteinchromosome CDS1555829 471 + 0.530786
NA APECO1_633 chaperone protein fimC precursorchromosome CDS1640088 720 - 0.452778
NA APECO1_3921 putative Mg2+ and Co2+ transporter CorBchromosome CDS2907933 1242 + 0.512882
NA APECO1_510 putative bacteriophage proteinchromosome CDS1480490 486 + 0.407407
aer APECO1_3344 aerotaxis sensor receptor, flavoproteinchromosome CDS3518261 1521 - 0.550296
aufA APECO1_3030 Auf fimbriae major subunit precursor AufAchromosome CDS3857882 705 - 0.476596
aufC APECO1_3032 outer membrane usher protein precursor AufCchromosome CDS3854398 2595 - 0.420424
aufD APECO1_3033 Auf fimbriae minor subunit precursor AufDchromosome CDS3853835 573 - 0.38918
aufF APECO1_3036 Auf fimbrial chaperone 2 precursor AufFchromosome CDS3852560 333 - 0.381381
aufF APECO1_3035 Auf fimbrial chaperone 2 precursor AufFchromosome CDS3853030 339 - 0.40708
betA APECO1_1679 choline dehydrogenasechromosome CDS353117 1605 - 0.582555
cheA APECO1_936 chemotaxis protein CheAchromosome CDS1979119 2004 - 0.530938
cheB APECO1_932 protein-glutamate methylesterasechromosome CDS1974586 1050 - 0.535238
cheR APECO1_933 chemotaxis regulator, protein-glutamate methyltransferasechromosome CDS1975638 861 - 0.54007
cheW APECO1_935 positive regulator of CheA protein activitychromosome CDS1978595 504 - 0.521825
cheZ APECO1_930 chemotaxis regulator, protein phosphatase for CheYchromosome CDS1973527 645 - 0.537984
cusC APECO1_1476 probable outer membrane lipoprotein CusC precursorchromosome CDS582777 1383 + 0.515546
ddg APECO1_4159 lipid A biosynthesis palmitoleoyl acyltransferasechromosome CDS2629449 921 + 0.515744
ecpD APECO1_1845 predicted periplasmic pilin chaperonechromosome CDS161474 741 - 0.442645
fhiA APECO1_1740 FhiA proteinchromosome CDS280336 1740 - 0.567816
fimA APECO1_2116 type 1 fimbriae major subunit FimAchromosome CDS4924029 612 + 0.493464
fimA APECO1_2111 P pilus assembly protein, pilin FimAchromosome CDS4929255 510 + 0.519608
fimC APECO1_2114 type I fimbrial chaperonechromosome CDS4925281 726 + 0.444904
fimD APECO1_2113 outer membrane usher protein FimD precursorchromosome CDS4926072 2637 + 0.482746
fimI APECO1_2115 FimI fimbrial proteinchromosome CDS4924582 663 + 0.505279
flgC APECO1_156 flagellar component of cell-proximal portion of basal-body rodchromosome CDS1113794 405 + 0.530864
flgD APECO1_157 flagellar hook formation protein FlgDchromosome CDS1114210 696 + 0.543103
flgE APECO1_158 flagellar biosynthesis, hook protein FlgEchromosome CDS1114930 1206 + 0.513267
flgF APECO1_159 flagellar basal-body rod protein FlgFchromosome CDS1116155 756 + 0.59127
flgG APECO1_160 flagellar basal-body rod protein FlgGchromosome CDS1117082 783 + 0.536398
flgH APECO1_161 flagellar basal body L-ring protein precursorchromosome CDS1117908 708 + 0.526836
flgI APECO1_162 flagella basal body P-ring-like protein FlgIchromosome CDS1118624 1101 + 0.542234
flgJ APECO1_163 peptidoglycan hydrolase FlgJchromosome CDS1119694 972 + 0.538066
flgK APECO1_164 hook-filament junction protein FlgKchromosome CDS1120731 1644 + 0.520073
flgL APECO1_165 flagellar hook-associated protein FlgLchromosome CDS1122386 954 + 0.505241
flgM APECO1_153 FlgMchromosome CDS1112191 294 - 0.517007
flhA APECO1_928 flagellar biosynthesis protein FlhAchromosome CDS1970099 2154 - 0.547818
flhB APECO1_929 flagellar biosynthesis protein Bchromosome CDS1972170 1149 - 0.550914
fliC APECO1_964 flagellinchromosome CDS2007082 1758 - 0.48066
fliD APECO1_965 flagellar capping proteinchromosome CDS2009105 1407 + 0.517413
fliE APECO1_976 Flagellar hook-basal body complex protein fliEchromosome CDS2020023 315 - 0.549206
fliG APECO1_978 flagellar motor switch protein Gchromosome CDS2022204 996 + 0.562249
fliH APECO1_979 flagellar assembly proteinchromosome CDS2023192 687 + 0.577875
fliI APECO1_980 flagellum-specific ATP synthasechromosome CDS2023878 1374 + 0.583697
fliJ APECO1_981 flagellar FliJ proteinchromosome CDS2025270 444 + 0.52027
fliK APECO1_982 flagellar hook-length control proteinchromosome CDS2025710 1128 + 0.545213
fliL APECO1_983 flagellar protein FliLchromosome CDS2026942 465 + 0.531183
fliM APECO1_984 Flagellar motor switch proteinchromosome CDS2027366 1050 + 0.527619
fliN APECO1_985 Flagellar motor switch proteinchromosome CDS2028412 414 + 0.565217
fliP APECO1_987 flagellar assembly protein FliPchromosome CDS2029193 738 + 0.525745
fliQ APECO1_988 flagellar biosynthetic protein FliQchromosome CDS2029940 270 + 0.507407
fliS APECO1_966 flagellar protein FliSchromosome CDS2010536 411 + 0.481752
fmlA APECO1_634 putative Fml fimbriae subunitchromosome CDS1641160 564 - 0.466312
ftsY APECO1_2989 cell division protein FtsYchromosome CDS3901864 1497 - 0.533066
gspC APECO1_3457 putative type II secretion protein GspCchromosome CDS3388651 843 - 0.525504
gspD APECO1_3458 putative type II secretion protein GspDchromosome CDS3386561 2061 - 0.545366
gspE APECO1_3459 putative type II secretion protein GspEchromosome CDS3385068 1494 - 0.572959
gspF APECO1_3460 putative type II secretion protein GspFchromosome CDS3383845 1224 - 0.585784
gspG APECO1_3461 putative type II secretion protein GspGchromosome CDS3383373 456 - 0.526316
gspH APECO1_3462 putative type II secretion protein GspHchromosome CDS3382806 564 - 0.556738
gspK APECO1_3465 putative type II secretion protein GspKchromosome CDS3380862 978 - 0.556237
gspL APECO1_3466 putative type II secretion protein GspLchromosome CDS3379687 1179 - 0.568278
gspM APECO1_3467 putative secretion pathway protein GspMchromosome CDS3379149 537 - 0.528864
hofC APECO1_1883 assembly protein in type IV pilin biogenesis, transmembrane proteinchromosome CDS116826 1203 - 0.521197
hofD APECO1_3117 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3756307 678 + 0.504425
hofD APECO1_3127 putative general secretion pathway protein D precursorchromosome CDS3747108 1965 + 0.498219
hofE APECO1_3126 putative general secretion pathway protein Echromosome CDS3749580 984 + 0.541667
hofF APECO1_3125 putative general secretion pathway protein Fchromosome CDS3750560 1197 + 0.506266
hofG APECO1_3124 putative general secretion pathway protein G precursorchromosome CDS3751766 438 + 0.493151
hofI APECO1_3122 putative general secretion pathway protein I precursorchromosome CDS3752678 435 + 0.487356
hofJ APECO1_3121 putative general secretion pathway protein J precursorchromosome CDS3753105 588 + 0.5
hofK APECO1_3120 putative general secretion pathway protein Kchromosome CDS3754120 552 + 0.483696
hofQ APECO1_3072 putative transport protein HofQ precursorchromosome CDS3804910 1239 - 0.536723
htrB APECO1_137 HtrBchromosome CDS1098015 921 - 0.534202
lepA APECO1_3962 GTP-binding elongation factor LepAchromosome CDS2859400 1800 - 0.532778
lpxK APECO1_27 LpxKchromosome CDS971838 987 + 0.552178
malK APECO1_2433 maltose/maltodextrin transport ATP-binding protein MalKchromosome CDS4569690 1206 + 0.544776
mbhA APECO1_1739 putative motility protein MbhAchromosome CDS282020 786 + 0.524173
motA APECO1_938 flagellar motor protein MotAchromosome CDS1982011 888 - 0.51464
motB APECO1_937 chemotaxis MotB proteinchromosome CDS1981088 927 - 0.530744
msbB APECO1_905 myristoyl acyltransferase; (KDO)2-(lauroyl)-lipid IVA acyltransferasechromosome CDS1947136 972 - 0.50823
papA APECO1_3519 major fibrial proteinchromosome CDS3323359 570 - 0.419298
papC APECO1_3521 outer membrane usher protein PapCchromosome CDS3320140 2520 - 0.52381
papD APECO1_3522 pilus assembly protein chaperone PapDchromosome CDS3319335 735 - 0.455782
papK APECO1_3524 pilus assembly protein PapKchromosome CDS3318171 537 - 0.541899
ppdA APECO1_3679 prepilin peptidase dependent protein A precursorchromosome CDS3171238 471 - 0.541401
pppA APECO1_3455 putative prepilin peptidase Achromosome CDS3390104 906 - 0.522075
pppD APECO1_1881 predicted major pilin subunitchromosome CDS119413 441 - 0.526077
secA APECO1_1888 translocasechromosome CDS110702 2706 + 0.521434
secB APECO1_2846 protein-export protein SecBchromosome CDS4078172 528 - 0.498106
sohB APECO1_432 possible protease SohBchromosome CDS1388193 1050 + 0.504762
sppA APECO1_835 protease IVchromosome CDS1862310 1857 + 0.51804
tar APECO1_934 methyl-accepting chemotaxis protein IIchromosome CDS1976789 1662 - 0.522864
tatB APECO1_2618 sec-independent translocase TatBchromosome CDS4340660 516 + 0.54845
tatC APECO1_2617 TatABCE protein translocation system subunit TatCchromosome CDS4341178 777 + 0.519949
tolC APECO1_3378 TolC outer membrane-associated proteinchromosome CDS3476755 1488 + 0.513441
tsr APECO1_2072 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4981953 1656 + 0.54529
ugpC APECO1_3009 SN-glycerol-3-phosphate transport ATP-binding protein UgpCchromosome CDS3882141 1071 - 0.57423
wzc APECO1_1150 protein-tyrosine kinasechromosome CDS2220644 2199 - 0.525693
yadM APECO1_1847 putative fimbrial-like adhesin proteinchromosome CDS158268 567 - 0.414462
yadN APECO1_1844 putative fimbrial-like adhesin proteinchromosome CDS162323 615 - 0.426016
ybaQ APECO1_1529 predicted DNA-binding transcriptional regulatorchromosome CDS525499 342 + 0.450292
ycjV APECO1_471 hypothetical ABC transporter ATP-binding protein YcjVchromosome CDS1438051 1083 + 0.498615
ydeS APECO1_631 predicted fimbrial-like adhesin proteinchromosome CDS1636851 531 - 0.435028
yehB APECO1_4437 putative outer membrane usher protein YehB precursorchromosome CDS2301964 2481 - 0.451431
yehC APECO1_4436 putative fimbrial chaperone YehC precursorchromosome CDS2304460 675 - 0.38963
yfcS APECO1_4229 putative periplasmic chaperone YfcS precursorchromosome CDS2556944 753 - 0.555113
yfcU APECO1_4228 putative outer membrane usher YfcU precursorchromosome CDS2557716 2655 - 0.543503
yggR APECO1_3571 hypothetical proteinchromosome CDS3288837 981 - 0.549439
yghS APECO1_3436 putative ATP-binding protein YghSchromosome CDS3416963 714 - 0.497199
yheK APECO1_3119 putative general secretion pathway protein Lchromosome CDS3754686 1164 + 0.482818
yjcP APECO1_2371 putative multidrug efflux system componentchromosome CDS4646229 1467 - 0.559646
yohG APECO1_4411 putative channel/filament proteinchromosome CDS2341290 1518 - 0.542819
yqiG APECO1_3369 putative outer membrane usher protein YqiG precursorchromosome CDS3487083 2523 + 0.468886
yqiH APECO1_3368 putative periplasmic chaperone YqiH precursorchromosome CDS3489612 750 + 0.478667
yrbC APECO1_3243 hypothetical proteinchromosome CDS3629846 636 - 0.522013
yrbF APECO1_3240 putative toluene transporter subunit: ATP-binding componentchromosome CDS3631846 810 - 0.545679
 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c4729 hypothetical proteinchromosome CDS4497281 204 + 0.529412
NA c1846 hypothetical proteinchromosome CDS1686126 471 + 0.537155
NA c3163 Putative tail component of prophagechromosome CDS3036999 771 - 0.575875
NA c4213 Chaperone protein fimC precursorchromosome CDS3998067 780 - 0.382051
NA c4208 Putative fimbrial chaperone precursorchromosome CDS3993608 798 - 0.388471
NA c1456 Putative tail fiber component V of prophagechromosome CDS1357611 747 + 0.524766
NA c1934 Outer membrane usher protein fimD precursorchromosome CDS1774532 2652 - 0.443439
NA c1935 Chaperone protein fimC precursorchromosome CDS1777225 711 - 0.452883
NA c4210 Putative minor fimbrial subunit precursorchromosome CDS3994873 453 - 0.401766
NA c4209 Putative minor fimbrial subunit precursorchromosome CDS3994350 558 - 0.356631
NA c0959 Putative Regulatory proteinchromosome CDS928093 429 + 0.596737
NA c1936 Type-1 fimbrial protein, A chain precursorchromosome CDS1778297 612 - 0.444444
NA c4214 Putative major fimbrial subunit precursorchromosome CDS3998920 705 - 0.476596
cheA c2303 Chemotaxis protein cheAchromosome CDS2122813 2019 - 0.529965
cheB c2298 chemotaxis-specific methylesterasechromosome CDS2118280 1050 - 0.542857
cheR c2299 Chemotaxis protein methyltransferasechromosome CDS2119332 861 - 0.542393
cheW c2302 Chemotaxis protein cheWchromosome CDS2122289 504 - 0.521825
cheZ c2296 Chemotaxis protein cheZchromosome CDS2117221 675 - 0.533333
cpxP c4865 hypothetical proteinchromosome CDS4625475 504 + 0.501984
csgA c1306 Major curlin subunit precursorchromosome CDS1247944 459 + 0.518519
ecpD c0171 Chaperone protein ecpD precursorchromosome CDS165999 741 - 0.442645
fhiA c0377 FhiA proteinchromosome CDS356346 1740 - 0.571839
fimA c5393 Type-1 fimbrial protein, A chain precursorchromosome CDS5137789 606 + 0.493399
fimC c5395 Chaperone protein fimC precursorchromosome CDS5139035 726 + 0.446281
fimD c5396 Outer membrane usher protein fimD precursorchromosome CDS5139826 2637 + 0.482746
fimF c5397 FimF protein precursorchromosome CDS5142469 534 + 0.490637
fimG c5399 FimG protein precursorchromosome CDS5143015 504 + 0.521825
fimI c5394 Fimbrin-like protein fimI precursorchromosome CDS5138459 540 + 0.496296
flgA c1341 flagellar basal body P-ring biosynthesis proteinchromosome CDS1273707 660 - 0.536364
flgB c1342 flagellar basal body rod proteinchromosome CDS1274522 417 + 0.532374
flgC c1343 flagellar basal body rod proteinchromosome CDS1274942 405 + 0.533333
flgD c1344 Basal-body rod modification protein flgDchromosome CDS1275358 696 + 0.537356
flgE c1345 flagellar hook proteinchromosome CDS1276078 1206 + 0.516584
flgF c1346 Flagellar basal-body rod protein flgFchromosome CDS1277303 756 + 0.59127
flgG c1347 Flagellar basal-body rod protein flgGchromosome CDS1278230 783 + 0.538953
flgH c1348 flagellar L-ring protein precursorchromosome CDS1279050 714 + 0.52521
flgI c1349 flagellar P-ring protein precursorchromosome CDS1279772 1101 + 0.542234
flgJ c1350 flagellar biosynthesis proteinchromosome CDS1280842 972 + 0.539095
flgK c1351 flagellar hook-associated proteinchromosome CDS1281879 1644 + 0.520681
flgL c1352 flagellar hook-associated proteinchromosome CDS1283534 954 + 0.507338
flgM c1340 Negative regulator of flagellin synthesischromosome CDS1273338 294 - 0.530612
flgN c1339 Flagella synthesis protein flgNchromosome CDS1272917 417 - 0.482014
flhA c2293 flagellar biosynthesis proteinchromosome CDS2113793 2154 - 0.550139
flhB c2294 flagellar biosynthesis proteinchromosome CDS2115864 1149 - 0.550914
fliC c2338 flagellar biosynthesis proteinchromosome CDS2151497 1788 - 0.472036
fliD c2339 flagellar hook-associated proteinchromosome CDS2153550 1407 + 0.518124
fliE c2353 flagellar basal body proteinchromosome CDS2164468 345 - 0.536232
fliF c2354 flagellar M-ring proteinchromosome CDS2164997 1659 + 0.549729
fliG c2355 flagellar motor proteinchromosome CDS2166648 996 + 0.561245
fliH c2357 flagellar assembly proteinchromosome CDS2167615 708 + 0.573446
fliI c2358 flagellum-specific ATP synthasechromosome CDS2168322 1374 + 0.582969
fliJ c2359 flagellar proteinchromosome CDS2169714 444 + 0.522523
fliK c2360 Flagellar hook-length control proteinchromosome CDS2170154 1128 + 0.547872
fliL c2361 flagellar biosynthesis proteinchromosome CDS2171386 465 + 0.529032
fliM c2362 flagellar motor switch proteinchromosome CDS2171810 1050 + 0.531429
fliN c2363 flagellar motor switch proteinchromosome CDS2172856 414 + 0.557971
fliO c2364 Flagellar protein fliOchromosome CDS2173269 369 + 0.558266
fliP c2365 flagellar biosynthesis proteinchromosome CDS2173637 738 + 0.53794
fliQ c2366 flagellar biosynthesis proteinchromosome CDS2174384 270 + 0.511111
fliR c2367 flagellar biosynthesis proteinchromosome CDS2174662 786 + 0.469466
fliS c2340 flagellar protein FliSchromosome CDS2154981 411 + 0.479319
focA c1239 F1C major fimbrial subunit precursorchromosome CDS1188213 543 + 0.443831
focC c1241 F1C periplasmic chaperonechromosome CDS1189406 696 + 0.452586
focD c1242 F1C fimbrial usherchromosome CDS1190123 2679 + 0.52221
focF c1243 F1C minor fimbrial subunit F precursorchromosome CDS1192814 528 + 0.467803
focG c1244 F1C minor fimbrial subunit protein G presursorchromosome CDS1193363 504 + 0.418651
focH c1245 F1C Putative fimbrial adhesin precursorchromosome CDS1193817 1011 + 0.479723
hofB c0126 Protein transport protein hofBchromosome CDS120853 1386 - 0.536075
hofC c0125 Protein transport protein hofCchromosome CDS119661 1203 - 0.522028
hofD c4106 Leader peptidasechromosome CDS3896922 678 + 0.504425
hofF c4098 Putative general secretion pathway protein Fchromosome CDS3891196 1197 + 0.509607
hofG c4099 Putative general secretion pathway protein G precursorchromosome CDS3892402 438 + 0.493151
hofH c4100 Putative general secretion pathway protein H precursorchromosome CDS3892847 510 + 0.554902
htrE c0170 Outer membrane usher protein htrE precursorchromosome CDS163376 2589 - 0.447277
mbhA c0378 flagellar motor proteinchromosome CDS358027 789 + 0.531052
motA c2305 flagellar motor proteinchromosome CDS2125705 888 - 0.512387
motB c2304 flagellar motor proteinchromosome CDS2124782 927 - 0.531823
nfrB c0655 Bacteriophage N4 adsorption protein Bchromosome CDS634562 2163 - 0.526121
papA c3592 PapA proteinchromosome CDS3436965 600 - 0.418333
papA_2 c5188 PapA proteinchromosome CDS4948203 597 - 0.41206
papC c3590 PapC proteinchromosome CDS3433739 2523 - 0.524772
papC_2 c5186 PapC proteinchromosome CDS4944977 2532 - 0.525671
papD c3589 PapD proteinchromosome CDS3432934 606 - 0.450495
papD_2 c5185 PapD proteinchromosome CDS4944172 735 - 0.458503
papK c3586 PapK proteinchromosome CDS3431770 540 - 0.542593
papK_2 c5182 PapK proteinchromosome CDS4943008 540 - 0.542593
ppdA c3420 Prepilin peptidase dependent protein A precursorchromosome CDS3271027 471 - 0.543524
ppdD c0127 Prepilin peptidase dependent protein D precursorchromosome CDS122248 441 - 0.526077
sfaD c1240 Putative minor F1C fimbrial subunit precursorchromosome CDS1188841 525 + 0.506667
spy c2143 Spheroplast protein Y precursorchromosome CDS1978985 486 - 0.510288
tar c2301 Methyl-accepting chemotaxis protein IIchromosome CDS2120483 1683 - 0.521093
tsr c5430 Methyl-accepting chemotaxis protein Ichromosome CDS5176932 1665 + 0.544144
yadM c0169 Hypothetical protein yadM precursorchromosome CDS162793 567 - 0.417989
yadN c0172 Hypothetical fimbrial-like protein yadN precursorchromosome CDS166848 615 - 0.426016
yagX c0402 Hypothetical protein yagX precursorchromosome CDS381928 2526 - 0.551861
ybaQ c0603 Hypothetical protein ybaQchromosome CDS583093 342 + 0.450292
ycbS c4212 Hypothetical outer membrane usher protein ycbS precursorchromosome CDS3995436 2595 - 0.419653
ydeR c1932 Hypothetical fimbrial-like protein ydeR precursorchromosome CDS1773472 504 - 0.434524
ydeS c1933 Hypothetical fimbrial-like protein ydeS precursorchromosome CDS1773988 531 - 0.436911
yehB c2636 Hypothetical outer membrane usher protein yehB precursorchromosome CDS2479102 2496 - 0.452724
yehC c2637 Hypothetical fimbrial chaperone yehC precursorchromosome CDS2481598 675 - 0.386667
yfcP c2879 Hypothetical fimbrial-like protein yfcP precursorchromosome CDS2732134 528 - 0.545455
yfcS c2882 Hypothetical fimbrial chaperone yfcS precursorchromosome CDS2733654 753 - 0.552457
yfcU c2883 Putative outer membrane proteinchromosome CDS2734426 2655 - 0.544256
yggR c3536 Hypothetical protein yggRchromosome CDS3390045 1056 - 0.543561
ygiL c3791 Hypothetical fimbrial-like protein ygiL precursorchromosome CDS3624578 564 + 0.443262
yheF c4096 Probable general secretion pathway protein D precursorchromosome CDS3887744 1965 + 0.499237
yheG c4097 Probable general secretion pathway protein Echromosome CDS3889718 1482 + 0.518219
yheH c4101 Probable general secretion pathway protein I precursorchromosome CDS3893314 417 + 0.494005
yigU c4787 Sec-independent protein translocase protein tatCchromosome CDS4548588 777 + 0.518661
yjaI c4959 Zinc resistance-associated protein precursorchromosome CDS4732470 561 - 0.509804
ymfL c3195 Hypothetical protein ymfLchromosome CDS3058346 609 - 0.489327
yqiG c3792 Hypothetical outer membrane usher protein yqiG precursorchromosome CDS3625228 2523 + 0.467697
yqiH c3793 Hypothetical fimbrial chaperone yqiH precursorchromosome CDS3627757 750 + 0.476
yrbF c3955 Hypothetical ABC transporter ATP-binding protein yrbFchromosome CDS3772749 810 - 0.545679
yrfC c4164 Hypothetical protein yrfCchromosome CDS3947486 540 - 0.540741
 
Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
cheA b1888 fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing proteinchromosome CDS1971384 1965 - 0.531298
cheB b1883 chemotaxis-specific methylesterasechromosome CDS1965476 1050 - 0.542857
cheR b1884 chemotaxis regulator, protein-glutamate methyltransferasechromosome CDS1966528 861 - 0.542393
cheW b1887 purine-binding chemotaxis proteinchromosome CDS1970860 504 - 0.519841
cheZ b1881 chemotaxis regulator, protein phosphatase for CheYchromosome CDS1964417 645 - 0.534884
cpxP b4484 periplasmic protein combats stresschromosome CDS4103843 501 + 0.500998
ecpD b0140 predicted periplasmic pilin chaperonechromosome CDS155461 741 - 0.443995
fhiA b0229 flagellar system protein, promoterless fragment (pseudogene)chromosome CDS248358 1713 - 0.580269
fimA b4314 major type 1 subunit fimbrin (pilin)chromosome CDS4541138 549 + 0.517304
fimC b4316 chaperone, periplasmicchromosome CDS4542327 726 + 0.444904
fimD b4317 outer membrane usher protein, type 1 fimbrial synthesischromosome CDS4543119 2637 + 0.486159
fimF b4318 minor component of type 1 fimbriaechromosome CDS4545765 531 + 0.495292
fimG b4319 minor component of type 1 fimbriaechromosome CDS4546308 504 + 0.52381
fimI b4315 fimbrial protein involved in type 1 pilus biosynthesischromosome CDS4541751 540 + 0.492593
flgA b1072 flagellar basal body P-ring biosynthesis protein Achromosome CDS1129427 660 - 0.522727
flgB b1073 flagellar basal-body rod protein Bchromosome CDS1130241 417 + 0.534772
flgC b1074 flagellar basal-body rod protein Cchromosome CDS1130661 405 + 0.528395
flgD b1075 flagellar basal body rod modification protein Dchromosome CDS1131077 696 + 0.545977
flgE b1076 flagellar hook protein Echromosome CDS1131797 1209 + 0.515302
flgF b1077 flagellar component of cell-proximal portion of basal-body rodchromosome CDS1133025 756 + 0.59127
flgG b1078 flagellar component of cell-distal portion of basal-body rodchromosome CDS1133952 783 + 0.537676
flgH b1079 flagellar L-ring protein precursor Hchromosome CDS1134787 699 + 0.53505
flgI b1080 flagellar P-ring protein precursor Ichromosome CDS1135497 1098 + 0.541894
flgJ b1081 flagellar biosynthesis protein FlgJchromosome CDS1136594 942 + 0.546709
flgK b1082 flagellar hook-associated protein Kchromosome CDS1137601 1644 + 0.518248
flgL b1083 flagellar hook-associated protein Lchromosome CDS1139256 954 + 0.507338
flgM b1071 anti-sigma factor for FliA (sigma 28)chromosome CDS1129058 294 - 0.527211
flgN b1070 export chaperone for FlgK and FlgLchromosome CDS1128637 417 - 0.482014
flhA b1879 flagellar biosynthesis protein Achromosome CDS1960996 2079 - 0.548822
flhB b1880 flagellar biosynthesis protein Bchromosome CDS1963067 1149 - 0.549173
fliC b1923 flagellinchromosome CDS2000134 1497 - 0.47495
fliD b1924 flagellar capping proteinchromosome CDS2001896 1407 + 0.522388
fliE b1937 flagellar hook-basal body protein FliEchromosome CDS2010724 315 - 0.539683
fliF b1938 flagellar M-ring proteinchromosome CDS2011253 1659 + 0.546112
fliG b1939 flagellar motor switch protein Gchromosome CDS2012904 996 + 0.556225
fliH b1940 flagellar assembly protein Hchromosome CDS2013892 687 + 0.570597
fliI b1941 flagellum-specific ATP synthasechromosome CDS2014578 1374 + 0.585881
fliJ b1942 flagellar biosynthesis chaperonechromosome CDS2015970 444 + 0.515766
fliK b1943 flagellar hook-length control proteinchromosome CDS2016410 1128 + 0.548759
fliL b1944 flagellar basal body-associated protein FliLchromosome CDS2017642 465 + 0.533333
fliM b1945 flagellar motor switch protein Mchromosome CDS2018111 1005 + 0.533333
fliN b1946 flagellar motor switch proteinchromosome CDS2019112 414 + 0.550725
fliO b1947 flagellar biosynthesis proteinchromosome CDS2019528 366 + 0.546448
fliP b1948 flagellar biosynthesis protein Pchromosome CDS2019893 738 + 0.531165
fliQ b1949 flagellar biosynthesis protein Qchromosome CDS2020640 270 + 0.503704
fliR b1950 flagellar biosynthesis protein Rchromosome CDS2020917 786 + 0.474555
fliS b1925 flagellar protein FliSchromosome CDS2003327 411 + 0.498783
gspD b3325 general secretory pathway component, crypticchromosome CDS3454399 1953 + 0.501792
gspE b3326 general secretory pathway component, crypticchromosome CDS3456361 1482 + 0.524966
gspF b3327 general secretory pathway component, crypticchromosome CDS3457839 1197 + 0.510443
gspG b3328 pseudopilin, cryptic, general secretion pathwaychromosome CDS3459045 438 + 0.486301
gspH b3329 predicted general secretory pathway component, crypticchromosome CDS3459490 510 + 0.560784
gspI b3330 general secretory pathway component, crypticchromosome CDS3459996 378 + 0.478836
gspO b3335 bifunctional prepilin leader peptidase/ methylasechromosome CDS3463565 678 + 0.504425
hofB b0107 conserved protein with nucleoside triphosphate hydrolase domainchromosome CDS115714 1386 - 0.534632
hofC b0106 assembly protein in type IV pilin biogenesis, transmembrane proteinchromosome CDS114522 1203 - 0.519534
htrE b0139 predicted outer membrane usher proteinchromosome CDS152829 2598 - 0.43341
motA b1890 flagellar motor protein MotAchromosome CDS1974276 888 - 0.513514
motB b1889 flagellar motor protein MotBchromosome CDS1973353 927 - 0.531823
nfrB b0569 bacteriophage N4 receptor, inner membrane subunitchromosome CDS590164 2238 - 0.525022
ppdA b2826 hypothetical proteinchromosome CDS2961729 471 - 0.541401
ppdC b2823 hypothetical proteinchromosome CDS2960463 324 - 0.549383
ppdD b0108 predicted major pilin subunitchromosome CDS117109 441 - 0.530612
pppA b2972 bifunctional prepilin leader peptidase/ methylasechromosome CDS3111565 810 - 0.517284
sfmA b0530 predicted fimbrial-like adhesin proteinchromosome CDS557435 543 + 0.445672
sfmC b0531 pilin chaperone, periplasmicchromosome CDS558197 693 + 0.425685
sfmD b0532 predicted outer membrane export usher proteinchromosome CDS558920 2604 + 0.478111
sfmF b0534 predicted fimbrial-like adhesin proteinchromosome CDS562553 516 + 0.5
sfmH b0533 predicted fimbrial-like adhesin proteinchromosome CDS561565 978 + 0.453988
spy b1743 envelope stress induced periplasmic proteinchromosome CDS1823164 486 - 0.50823
tap b1885 methyl-accepting protein IVchromosome CDS1967407 1602 - 0.535581
tar b1886 methyl-accepting chemotaxis protein IIchromosome CDS1969054 1662 - 0.527677
tolC b3035 outer membrane channel precursor proteinchromosome CDS3176137 1482 + 0.513495
trg b1421 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptorchromosome CDS1490494 1641 + 0.512492
tsr b4355 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4589680 1656 + 0.546498
ugpC b3450 glycerol-3-phosphate transporter subunitchromosome CDS3586133 1071 - 0.577031
wzc b2060 protein-tyrosine kinasechromosome CDS2131514 2163 - 0.526583
yadC b0135 predicted fimbrial-like adhesin proteinchromosome CDS149715 1239 - 0.403551
yadN b0141 predicted fimbrial-like adhesin proteinchromosome CDS156299 585 - 0.447863
yagX b0291 predicted aromatic compound dioxygenasechromosome CDS306031 2526 - 0.552652
ybaQ b0483 predicted DNA-binding transcriptional regulatorchromosome CDS507442 342 + 0.447368
ybgD b0719 predicted fimbrial-like adhesin proteinchromosome CDS751452 567 - 0.467372
ybgP b0717 predicted assembly proteinchromosome CDS748202 729 - 0.477366
ybgQ b0718 predicted outer membrane proteinchromosome CDS748945 2448 - 0.499591
ycbF b0944 predicted periplasmic pilini chaperonechromosome CDS1003170 711 + 0.517581
ycbQ b0938 predicted fimbrial-like adhesin proteinchromosome CDS997091 540 + 0.424074
ycbR b0939 predicted periplasmic pilin chaperonechromosome CDS997713 702 + 0.450142
ycbS b0940 predicted outer membrane usher proteinchromosome CDS998439 2601 + 0.478662
ycbU b0942 predicted fimbrial-like adhesin proteinchromosome CDS1002112 543 + 0.471455
ydeR b1503 predicted fimbrial-like adhesin proteinchromosome CDS1585817 504 - 0.448413
ydeS b1504 predicted fimbrial-like adhesin proteinchromosome CDS1586333 531 - 0.448211
ydeT b1505 hypothetical proteinchromosome CDS1586877 1149 - 0.445605
yehB b2109 predicted outer membrane proteinchromosome CDS2186452 2481 - 0.455058
yehC b2110 predicted periplasmic pilin chaperonechromosome CDS2188948 720 - 0.393056
yehD b2111 predicted fimbrial-like adhesin proteinchromosome CDS2189702 543 - 0.405157
yfcP b2333 predicted fimbrial-like adhesin proteinchromosome CDS2448073 540 - 0.487037
yfcQ b2334 predicted fimbrial-like adhesin proteinchromosome CDS2448609 489 - 0.466258
yfcR b2335 predicted fimbrial-like adhesin proteinchromosome CDS2449094 513 - 0.491228
yfcS b2336 predicted periplasmic pilus chaperonechromosome CDS2449606 753 - 0.50996
yfcT b2337 predicted outer membrane export usher proteinchromosome CDS2450378 897 - 0.532887
yfcU b2338 predicted export usher proteinchromosome CDS2451287 1737 - 0.510075
yfcV b2339 predicted fimbrial-like adhesin proteinchromosome CDS2453105 564 - 0.460993
yfjD b4461 predicted inner membrane proteinchromosome CDS2746886 1197 + 0.517962
yfjI b2625 CP4-57 prophage; predicted proteinchromosome CDS2757007 1410 + 0.379433
yggR b2950 predicted transporterchromosome CDS3092122 981 - 0.554536
yghE b2969 predicted secretion pathway protein, L-type protein (pseudogene)chromosome CDS3109150 861 - 0.57259
ygiL b3043 predicted fimbrial-like adhesin proteinchromosome CDS3183436 552 + 0.436594
yhcA b3215 predicted periplasmic chaperone proteinchromosome CDS3360134 675 + 0.416296
yhcD b3216 predicted outer membrane proteinchromosome CDS3360829 2382 + 0.45508
yifL b4558 predicted lipoproteinchromosome CDS3992545 204 + 0.52451
ymfL b1147 e14 prophage; predicted DNA-binding transcriptional regulatorchromosome CDS1202479 570 + 0.494737
ymjB b4524 chromosome pseudo1379813 114 + 0.368421
ynaA b1368 Rac prophage; predicted tail proteinchromosome CDS1424478 1029 + 0.468416
yohG b2138 predicted outer membrane proteinchromosome CDS2225345 1089 - 0.557392
yqiG b3046 predicted outer membrane usher proteinchromosome CDS3185422 2466 + 0.422141
yqiH b3047 predicted periplasmic pilin chaperonechromosome CDS3187903 750 + 0.386667
yraH b3142 predicted fimbrial-like adhesin proteinchromosome CDS3285448 585 + 0.451282
yraI b3143 predicted periplasmic pilin chaperonechromosome CDS3286112 696 + 0.442529
yraJ b3144 predicted outer membrane proteinchromosome CDS3286836 2517 + 0.475963
yraK b3145 predicted fimbrial-like adhesin proteinchromosome CDS3289363 1092 + 0.478938
yrbF b3195 predicted toluene transporter subunit: ATP-binding component of ABC superfamilychromosome CDS3337278 810 - 0.545679
yrfB b3393 hypothetical proteinchromosome CDS3519031 441 - 0.546485
yrfC b3394 predicted fimbrial assembly proteinchromosome CDS3519455 540 - 0.553704
zraP b4002 Zn-binding periplasmic proteinchromosome CDS4199286 426 - 0.535211
 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z4969 putative fimbrial chaperonechromosome CDS4523989 699 - 0.424893
NA Z3601 putative major fimbrial subunitchromosome CDS3251489 564 - 0.473404
NA Z5220 putative fimbrial proteinchromosome CDS4767426 1083 - 0.437673
NA Z3598 putative minor fimbrial subunitchromosome CDS3247476 594 - 0.515152
NA Z1894 putative tail component of prophage CP-933Xchromosome CDS1722793 771 + 0.575875
NA Z1291 hypothetical proteinchromosome CDS1221650 477 + 0.48847
NA Z2204 putative fimbrial-like proteinchromosome CDS1978387 531 + 0.455744
NA Z4504 partial putative fimbrial proteinchromosome CDS4101655 492 + 0.48374
NA Z5138 hypothetical proteinchromosome CDS4688209 324 - 0.314815
NA Z4190 type III secretion proteinchromosome CDS3792965 987 - 0.356636
NA Z3596 putative minor fimbrial subunitchromosome CDS3246491 522 - 0.44636
NA Z4194 type III secretion system ATPasechromosome CDS3795212 1320 - 0.446212
NA Z2205 putative fimbrial-like proteinchromosome CDS1978930 504 + 0.446429
NA Z2358 putative tail component of prophage CP-933Rchromosome CDS2131009 663 - 0.547511
NA Z1534 putative chaperonechromosome CDS1425691 690 - 0.462319
NA Z5223 putative fimbrial chaperonechromosome CDS4772174 162 - 0.41358
NA Z4968m PapC-like porin protein involved in fimbrial biogenesischromosome CDS4521387 2574 - 0.514374
NA Z1537 putative chaperonechromosome CDS1430302 723 - 0.457815
NA Z2137 putative tail component of prophage CP-933Ochromosome CDS1915178 630 + 0.547619
NA Z0972 putative tail component of prophage CP-933Kchromosome CDS913399 750 + 0.557333
NA Z3597 putative minor fimbrial subunitchromosome CDS3247009 471 - 0.464968
NA Z3087 putative tail fiber component V of prophage CP-933Uchromosome CDS2757898 753 - 0.552457
NA L7029 lipid A biosynthesis lauroyl acyltransferasepO157 CDS21102 1032 + 0.475775
NA Z2200 putative major fimbrial subunitchromosome CDS1974046 564 + 0.466312
NA Z5325 hypothetical proteinchromosome CDS4856943 204 + 0.519608
NA Z0022 putative usher proteinchromosome CDS19299 2451 - 0.410037
NA Z0024 putative type-1 fimbrial proteinchromosome CDS22495 534 - 0.391386
NA Z2201 putative fimbrial chaperone proteinchromosome CDS1974961 720 + 0.459722
NA L7078 hypothetical proteinpO157 CDS65003 423 + 0.555556
NA Z1288m PapC-like porin protein involved in fimbrial biogenesischromosome CDS1217911 2601 + 0.476355
NA Z3600 putative fimbrial usherchromosome CDS3248768 2640 - 0.544318
NA Z1478 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1364398 1008 + 0.531746
NA Z5225 putative major fimbrial subuitchromosome CDS4772963 603 - 0.44942
NA Z0023 putative chaperone proteinchromosome CDS21762 684 - 0.365497
NA Z4965 putative fimbrial subunitchromosome CDS4519782 531 - 0.512241
NA Z5224 putative fimbrial chaperonechromosome CDS4772476 384 - 0.382812
NA Z5222 putative fimbrial usherchromosome CDS4769618 2535 - 0.485207
NA Z1491 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1377180 657 + 0.531202
NA Z2203 putative fimbrial usher proteinchromosome CDS1975722 2652 + 0.44457
NA Z4971 putative major fimbrial subunitchromosome CDS4524740 537 - 0.463687
NA Z1536 putative usher proteinchromosome CDS1427727 2523 - 0.512485
NA Z1538 putative pilin subunitchromosome CDS1431089 561 - 0.511586
NA Z4185 type III secretion proteinchromosome CDS3790140 1122 - 0.33066
NA Z4197 type III secretion apparatus proteinchromosome CDS3799739 1704 - 0.387911
EHEC-hlyA L7048 hemolysin toxin proteinpO157 CDS39822 2997 + 0.39306
cheA Z2942 sensory transducer kinase between chemo- signal receptors and CheB and CheYchromosome CDS2650499 1965 - 0.53028
cheB Z2937 chemotaxis-specific methylesterasechromosome CDS2644593 1050 - 0.539048
cheR Z2938 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS2645645 861 - 0.54007
cheW Z2941 positive regulator of CheA protein activitychromosome CDS2649975 504 - 0.511905
cheZ Z2935 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorchromosome CDS2643534 645 - 0.534884
ecpD Z0151 putative fimbrial chaperone proteinchromosome CDS159884 732 - 0.483607
escC Z5126 escCchromosome CDS4680359 1539 + 0.373619
escN Z5119 escNchromosome CDS4674677 1341 - 0.443699
espB Z5105 secreted protein EspBchromosome CDS4660026 939 - 0.474973
etpD L7033 type II secretion proteinpO157 CDS26714 1929 + 0.503888
etpE L7034 type II secretion proteinpO157 CDS28642 1506 + 0.536521
etpF L7035 type II secretion proteinpO157 CDS30149 1224 + 0.565359
etpG L7036 type II secretion proteinpO157 CDS31403 435 + 0.514943
etpH L7037 type II secretion proteinpO157 CDS31834 555 + 0.533333
etpI L7038 type II secretion proteinpO157 CDS32385 366 + 0.579235
etpL L7041 type II secretion proteinpO157 CDS34254 1278 + 0.56651
etpN L7043 type II secretion proteinpO157 CDS36088 834 + 0.527578
fhiA Z0290 flagellar biosynthesischromosome CDS286245 1740 - 0.585057
fimA Z5912 major type 1 subunit fimbrin (pilin)chromosome CDS5428009 549 + 0.517304
fimC Z5914 periplasmic chaperone, required for type 1 fimbriaechromosome CDS5429198 726 + 0.444904
fimD Z5915 outer membrane protein; export and assembly of type 1 fimbriae, interruptedchromosome CDS5429990 2637 + 0.483125
fimF Z5916 fimbrial morphologychromosome CDS5432636 531 + 0.493409
fimG Z5917 fimbrial morphologychromosome CDS5433179 504 + 0.525794
fimI Z5913 fimbrial proteinchromosome CDS5428514 648 + 0.496914
flgA Z1710 flagellar basal body P-ring biosynthesis proteinchromosome CDS1574434 660 - 0.522727
flgB Z1711 flagellar basal body rod proteinchromosome CDS1575248 417 + 0.532374
flgC Z1712 flagellar basal body rod proteinchromosome CDS1575668 405 + 0.528395
flgD Z1713 flagellar biosynthesis, initiation of hook assemblychromosome CDS1576084 696 + 0.54454
flgE Z1714 flagellar hook proteinchromosome CDS1576804 1206 + 0.517413
flgF Z1715 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1578029 756 + 0.593915
flgG Z1716 flagellar biosynthesis, cell-distal portion of basal-body rodchromosome CDS1578922 783 + 0.538953
flgH Z1717 flagellar L-ring protein precursorchromosome CDS1579757 699 + 0.530758
flgI Z1718 flagellar P-ring protein precursorchromosome CDS1580467 1098 + 0.541894
flgJ Z1719 flagellar biosynthesis proteinchromosome CDS1581564 942 + 0.547771
flgK Z1720 flagellar hook-associated proteinchromosome CDS1582571 1644 + 0.517032
flgL Z1721 flagellar hook-associated proteinchromosome CDS1584226 954 + 0.509434
flgM Z1709 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1574065 294 - 0.517007
flgN Z1708 protein of flagellar biosynthesischromosome CDS1573644 417 - 0.479616
flhA Z2932 flagellar biosynthesis proteinchromosome CDS2640113 2079 - 0.545455
flhB Z2934 flagellar biosynthesis proteinchromosome CDS2642184 1149 - 0.547433
fliC Z3013 flagellar biosynthesis proteinchromosome CDS2699591 1758 - 0.485779
fliD Z3014 flagellar hook-associated proteinchromosome CDS2701614 1398 + 0.52432
fliE Z3027 flagellar basal body proteinchromosome CDS2712396 315 - 0.536508
fliF Z3028 flagellar M-ring proteinchromosome CDS2712925 1659 + 0.545509
fliG Z3029 flagellar motor proteinchromosome CDS2714576 996 + 0.558233
fliH Z3030 flagellar assembly proteinchromosome CDS2715543 708 + 0.572034
fliI Z3031 flagellum-specific ATP synthasechromosome CDS2716195 1491 + 0.585513
fliJ Z3032 flagellar proteinchromosome CDS2717704 444 + 0.529279
fliK Z3033 flagellar hook-length control proteinchromosome CDS2718144 1128 + 0.545213
fliL Z3034 flagellar biosynthesis proteinchromosome CDS2719377 465 + 0.533333
fliM Z3035 flagellar motor switch proteinchromosome CDS2719846 1005 + 0.529353
fliN Z3036 flagellar motor switch proteinchromosome CDS2720847 414 + 0.550725
fliO Z3037 flagelar biosynthesischromosome CDS2721323 306 + 0.552288
fliP Z3038 flagellar biosynthesis proteinchromosome CDS2721628 738 + 0.533875
fliQ Z3039 flagellar biosynthesis proteinchromosome CDS2722375 270 + 0.503704
fliR Z3040 flagellar biosynthesis proteinchromosome CDS2722652 786 + 0.477099
fliS Z3015 flagellar protein FliSchromosome CDS2703036 411 + 0.491484
hofB Z0117 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakechromosome CDS120204 1386 - 0.540404
hofC Z0116 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakechromosome CDS119012 1203 - 0.522028
hopD Z4693 putative leader peptidasechromosome CDS4255883 468 + 0.478632
htrE Z0150 putative fimbrial usher proteinchromosome CDS157242 2499 - 0.488595
mbhA Z0291 flagellar motor proteinchromosome CDS287929 786 + 0.52799
motA Z2944 flagellar motor proteinchromosome CDS2653391 888 - 0.512387
motB Z2943 flagellar motor proteinchromosome CDS2652468 927 - 0.530744
nfrB Z0699 bacteriophage N4 receptor, outer membrane proteinchromosome CDS661792 2238 - 0.524129
ppdA Z4143 prepilin peptidase dependent protein Achromosome CDS3753405 471 - 0.535032
ppdD Z0118 prelipin peptidase dependent proteinchromosome CDS121599 441 - 0.53288
sfmA Z0686 putative fimbrial-like proteinchromosome CDS650325 576 + 0.439236
sfmC Z0688 putative chaperonechromosome CDS651120 693 + 0.421356
sfmD Z0689 putative outer membrane protein, export functionchromosome CDS651843 2610 + 0.477012
sfmF Z0691 putative fimbrial proteinchromosome CDS655483 516 + 0.496124
spy Z2775 periplasmic protein related to spheroblast formationchromosome CDS2499855 486 - 0.506173
tap Z2939 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2646524 1602 - 0.536829
tar Z2940 methyl-accepting chemotaxis protein II, aspartate sensor receptorchromosome CDS2648171 1662 - 0.523466
trg Z2300 methyl-accepting chemotaxis protein III, ribose sensor receptorchromosome CDS2076859 1641 - 0.511274
tsr Z5955 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS5480000 1665 + 0.539339
yadN Z0152 putative fimbrial proteinchromosome CDS160696 606 - 0.458746
yagX Z0358 putative enzymechromosome CDS339216 2526 - 0.550277
ybgD Z0872 putative fimbriae structural proteinchromosome CDS830531 567 - 0.45679
ybgP Z0869 putative chaperonechromosome CDS827276 732 - 0.525956
ybgQ Z0871 putative outer membrane usher proteinchromosome CDS828310 2163 - 0.507166
ycbF Z1293m PapD-like chaperone involved in fimbrial biogenesischromosome CDS1222615 738 + 0.51355
ycbQ Z1286 putative fimbrial-like proteinchromosome CDS1216554 549 + 0.420765
ycbR Z1287 putative chaperonechromosome CDS1217185 702 + 0.457265
yehB Z3277 putative outer membrane proteinchromosome CDS2934385 2481 - 0.448206
yehC Z3278 putative chaperone proteinchromosome CDS2936881 723 - 0.394191
yehD Z3279 putative fimbrial-like proteinchromosome CDS2937643 543 - 0.38674
yfaL Z3487 putative ATP-binding component of a transport systemchromosome CDS3137469 3753 - 0.513189
yfcS Z3599 putative fimbrial chaperonechromosome CDS3247987 759 - 0.527009
yggR Z4295 putative protein transportchromosome CDS3902918 1026 - 0.546784
yiiO Z5458 hypothetical proteinchromosome CDS4974541 504 + 0.498016
yjaI Z5578 hypothetical proteinchromosome CDS5078834 567 - 0.516755
yraH Z4498 putative fimbrial-like proteinchromosome CDS4096182 585 + 0.459829
yraI Z4499 putative chaperonechromosome CDS4096846 696 + 0.441092
yraJ Z4500 putative outer membrane proteinchromosome CDS4097570 2517 + 0.474374
yrbF Z4558 putative ATP-binding component of a transport systemchromosome CDS4148825 810 - 0.546914
yrfC Z4748 hypothetical proteinchromosome CDS4300851 540 - 0.546296
 
Escherichia coli O157:H7 str. Sakai, Sakai
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECs5556 hypothetical proteinchromosome CDS4788180 204 + 0.519608
NA ECs3730 type III secretion system ATPasechromosome CDS3727907 1320 - 0.446212
NA ECs2449 spheroplast protein Ychromosome CDS2424653 486 - 0.506173
NA ECs3827 putative protein transportchromosome CDS3835606 1026 - 0.546784
NA ECs1021 putative fimbrial-like proteinchromosome CDS1127331 549 + 0.420765
NA ECs4074 putative ATP-binding component of a transport systemchromosome CDS4081609 810 - 0.546914
NA ECs2596 methyl-accepting chemotaxis protein IIchromosome CDS2572960 1662 - 0.524067
NA ECs0257 FhiAchromosome CDS286244 1740 - 0.585057
NA ECs0321 hypothetical proteinchromosome CDS339215 2526 - 0.550277
NA ECs4554 EspBchromosome CDS4591043 939 - 0.474973
NA ECs4668 hypothetical proteinchromosome CDS4703193 162 - 0.41358
NA ECs1027 putative fimbrial-like proteinchromosome CDS1132863 564 + 0.475177
NA ECs2917 putative fimbrial-like proteinchromosome CDS2867412 543 - 0.38674
NA ECs1280 putative major pilin proteinchromosome CDS1347317 561 - 0.511586
NA ECs1460 flagellar hook-associated proteinchromosome CDS1497485 1644 + 0.518248
NA ECs0144 putative pilin chaperonechromosome CDS159883 726 - 0.483471
NA ECs2680 flagellum-specific ATP synthasechromosome CDS2641100 1374 + 0.583697
NA ECs1461 flagellar hook-associated proteinchromosome CDS1499140 954 + 0.509434
NA ECs1238 hypothetical proteinchromosome CDS1293169 657 + 0.531202
NA ECs4021 putative chaperonechromosome CDS4029630 696 + 0.441092
NA ECs3222 putative fimbrial-like proteinchromosome CDS3181533 564 - 0.473404
NA ECs4426 putative fimbrial protein precursorchromosome CDS4452553 531 - 0.512241
NA ECs3683 prepilin peptidase dependent protein Achromosome CDS3686107 471 - 0.535032
NA ECs2108 putative fimbrial-like proteinchromosome CDS2109039 504 - 0.446429
NA ECs2599 flagellar motor proteinchromosome CDS2577257 927 - 0.530744
NA ECs2686 FliOchromosome CDS2646050 366 + 0.554645
NA ECs2687 flagellar biosynthesis proteinchromosome CDS2646415 738 + 0.533875
NA ECs2113 putative type 1 fimbrial protein precursorchromosome CDS2113863 564 - 0.468085
NA ECs2663 flagellar hook-associated proteinchromosome CDS2626402 1398 + 0.52432
NA ECs2109 putative fimbrial-like proteinchromosome CDS2109555 531 - 0.455744
NA ECs5275 FimCchromosome CDS5399246 675 + 0.451852
NA pO157p43 hypothetical proteinpO157 CDS42428 423 + 0.555556
NA ECs1451 flagellar basal body rod proteinchromosome CDS1490162 417 + 0.532374
NA ECs2594 response regulator for chemotaxischromosome CDS2570434 861 - 0.54007
NA ECs3221 putative outer membrane proteinchromosome CDS3178812 2640 - 0.545455
NA ECs4575 EscCchromosome CDS4611376 1539 + 0.373619
NA ECs2590 flagellar biosynthesis proteinchromosome CDS2566973 1149 - 0.548303
NA ECs4236 hypothetical proteinchromosome CDS4233629 540 - 0.546296
NA ECs0592 putative fimbrial-like proteinchromosome CDS650664 543 + 0.445672
NA ECs0743 truncated outer membrane proteinchromosome CDS826656 2172 - 0.507366
NA ECs4665 putative fimbrial proteinchromosome CDS4698445 1083 - 0.437673
NA ECs4670 putative type 1 fimbrial proteinchromosome CDS4703982 603 - 0.44942
NA ECs3220 putative chaperonechromosome CDS3178031 759 - 0.528327
NA ECs1111 hypothetical proteinchromosome CDS1196079 606 + 0.542904
NA ECs1278 putative outer membrane usher proteinchromosome CDS1343955 2523 - 0.512882
NA ECs2593 chemotaxis-specific methylesterasechromosome CDS2569382 1050 - 0.54
NA ECs2689 flagellar biosynthesis proteinchromosome CDS2647439 786 + 0.477099
NA ECs0143 putative outer membrane porin proteinchromosome CDS157241 2601 - 0.489043
NA ECs0834 putative major tail proteinchromosome CDS911757 744 + 0.557796
NA ECs4431 putative fimbrial major protein precursorchromosome CDS4457511 537 - 0.465549
NA ECs2679 flagellar assembly proteinchromosome CDS2640331 708 + 0.572034
NA ECs2681 flagellar proteinchromosome CDS2642492 444 + 0.529279
NA ECs5277 FimFchromosome CDS5402633 531 + 0.493409
NA ECs4026 disrupted fimbrial proteinchromosome CDS4034457 474 + 0.483122
NA ECs4022 putative outer membrane proteinchromosome CDS4030354 2517 + 0.474374
NA ECs2597 positive regulator of CheA protein activitychromosome CDS2574764 504 - 0.515873
NA ECs0022 putative outer membrane usher protein precursorchromosome CDS19298 2451 - 0.410037
NA ECs1453 FlgDchromosome CDS1490998 696 + 0.545977
NA ECs0594 putative outer membrane proteinchromosome CDS652149 2610 + 0.477012
NA ECs2682 flagellar hook-length control proteinchromosome CDS2642932 1128 + 0.547872
NA ECs0256 flagellar motor proteinchromosome CDS287928 786 + 0.52799
NA ECs3721 type III secretion proteinchromosome CDS3722835 1122 - 0.33066
NA ECs1022 putative chaperonechromosome CDS1127962 702 + 0.457265
NA ECs4839 hypothetical proteinchromosome CDS4905777 504 + 0.498016
NA ECs4586 hypothetical proteinchromosome CDS4619226 324 - 0.314815
NA ECs1455 FlgFchromosome CDS1492943 756 + 0.593915
NA ECs1448 FlgNchromosome CDS1488558 417 - 0.479616
NA ECs4568 EscNchromosome CDS4605694 1341 - 0.443699
NA ECs2595 methyl-accepting chemotaxis protein IVchromosome CDS2571313 1602 - 0.536829
NA ECs4667 putative outer membrane usher protein precursorchromosome CDS4700637 2535 - 0.485207
NA ECs2600 flagellar motor proteinchromosome CDS2578180 888 - 0.512387
NA ECs5276 FimDchromosome CDS5399987 2637 + 0.483504
NA ECs1450 flagellar basal body P-ring biosynthesis proteinchromosome CDS1489348 660 - 0.522727
NA ECs2110 putative outer membrane proteinchromosome CDS2110099 1149 - 0.448216
NA ECs5278 FimGchromosome CDS5403176 504 + 0.525794
NA ECs2598 CheAchromosome CDS2575288 1965 - 0.530789
NA ECs2591 CheY protein phophatasechromosome CDS2568323 645 - 0.534884
NA ECs0111 HofBchromosome CDS120203 1386 - 0.540404
NA ECs5274 FimIchromosome CDS5398511 648 + 0.498457
NA ECs2688 flagellar biosynthesis proteinchromosome CDS2647162 270 + 0.503704
NA ECs4669 putative fimbrial chaperonechromosome CDS4703495 384 - 0.380208
NA ECs2026 methyl-accepting chemotaxis protein IIIchromosome CDS2009979 1641 + 0.511274
NA ECs0024 putative fimbrial proteinchromosome CDS22494 534 - 0.391386
NA ECs2915 putative outer membrane proteinchromosome CDS2864154 2481 - 0.448206
NA ECs0596 putative fimbrial-like proteinchromosome CDS655789 516 + 0.496124
NA ECs0593 putative chaperonechromosome CDS651426 693 + 0.421356
NA ECs1504 hypothetical proteinchromosome CDS1543524 558 + 0.410394
NA ECs4925 hypothetical proteinchromosome CDS5010088 426 - 0.535211
NA ECs2676 flagellar basal body proteinchromosome CDS2637184 315 - 0.536508
NA ECs1449 FlgMchromosome CDS1488979 294 - 0.517007
NA ECs1640 major tail protein Vchromosome CDS1638847 741 + 0.584345
NA ECs1452 flagellar basal body rod proteinchromosome CDS1490582 405 + 0.528395
NA ECs1459 flagellar biosynthesis proteinchromosome CDS1496478 942 + 0.547771
NA ECs1222 hypothetical proteinchromosome CDS1280387 1008 + 0.531746
NA ECs4430 putative fimbrial chaperone protein precursorchromosome CDS4456760 699 - 0.426323
NA ECs1456 FlgGchromosome CDS1493836 783 + 0.54023
NA ECs1279 putative chaperone proteinchromosome CDS1346530 723 - 0.457815
NA ECs2662 flagellar biosynthesis proteinchromosome CDS2624379 1758 - 0.486348
NA ECs0145 putative fimbrial-like proteinchromosome CDS160695 597 - 0.460637
NA ECs4020 putative fimbrial-like proteinchromosome CDS4028966 585 + 0.459829
NA ECs1458 flagellar P-ring protein precursorchromosome CDS1495378 1101 + 0.542234
NA ECs1028 hypothetical proteinchromosome CDS1133392 570 + 0.515789
NA ECs2664 flagellar protein FliSchromosome CDS2627824 411 + 0.493917
NA ECs2169 hypothetical proteinchromosome CDS2172597 753 - 0.551129
NA ECs0110 HofCchromosome CDS119011 1203 - 0.522028
NA ECs0742 putative chaperonechromosome CDS825622 732 - 0.525956
NA ECs2678 flagellar motor proteinchromosome CDS2639364 996 + 0.559237
NA ECs3218 putative fimbrial proteinchromosome CDS3177053 471 - 0.464968
NA ECs2683 flagellar biosynthesis proteinchromosome CDS2644164 465 + 0.533333
NA ECs0744 putative fimbrial-like proteinchromosome CDS828877 582 - 0.453608
NA ECs4188 HopDchromosome CDS4188661 468 + 0.478632
NA ECs2685 flagellar motor switch proteinchromosome CDS2645634 414 + 0.550725
NA ECs2112 putative fimbrial chaperone protein precursorchromosome CDS2112792 711 - 0.459916
NA ECs2916 putative chaperonechromosome CDS2866650 675 - 0.38963
NA ECs2677 flagellar M-ring proteinchromosome CDS2637713 1659 + 0.545509
NA ECs3726 type III secretion proteinchromosome CDS3725660 987 - 0.356636
NA ECs2589 flagellar biosynthesis proteinchromosome CDS2564902 2079 - 0.545455
NA ECs1276 putative chaperone proteinchromosome CDS1341919 630 - 0.461905
NA ECs0601 NfrBchromosome CDS662098 2238 - 0.524129
NA ECs2952 hypothetical proteinchromosome CDS2908609 753 - 0.552457
NA ECs5315 methyl-accepting chemotaxis protein Ichromosome CDS5450007 1665 + 0.540541
NA ECs1454 flagellar hook proteinchromosome CDS1491718 1206 + 0.517413
NA ECs1457 flagellar L-ring protein precursorchromosome CDS1494671 699 + 0.530758
NA ECs3733 EivGchromosome CDS3732434 1704 - 0.387911
NA ECs0112 prelipin peptidase dependent proteinchromosome CDS121598 441 - 0.53288
NA ECs3217 putative fimbrial-like proteinchromosome CDS3176535 549 - 0.448087
NA ECs0023 putative fimbrial chaperonechromosome CDS21761 684 - 0.365497
NA ECs2729 hypothetical proteinchromosome CDS2682522 663 - 0.547511
NA ECs2684 flagellar motor switch proteinchromosome CDS2644633 1005 + 0.530348
NA ECs3116 putative ATP-binding component of a transport systemchromosome CDS3066200 3753 - 0.513189
NA ECs5273 FimAchromosome CDS5398006 549 + 0.517304
etpD pO157p03 EtpDpO157 CDS3675 1758 + 0.511945
etpE pO157p04 EtpEpO157 CDS5432 1506 + 0.536521
etpF pO157p05 EtpFpO157 CDS6939 1224 + 0.565359
etpG pO157p06 EtpGpO157 CDS8193 435 + 0.512644
etpH pO157p07 EtpHpO157 CDS8624 555 + 0.533333
etpI pO157p08 EtpIpO157 CDS9193 348 + 0.58046
etpN pO157p13 EptNpO157 CDS12995 717 + 0.527197
hlyA pO157p18 hemolysin ApO157 CDS16612 2997 + 0.39306
 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2643 DNA transfer proteinchromosome CDS2606275 2160 - 0.487037
NA UTI89_C1642 hypothetical proteinchromosome CDS1566910 471 + 0.530786
NA UTI89_C5120 putative protease/scaffold proteinchromosome CDS5011325 2124 + 0.515066
NA UTI89_C0514 hypothetical proteinchromosome CDS523901 342 + 0.450292
NA UTI89_C4905 putative F17-like fimbrial usherchromosome CDS4803028 2586 - 0.424981
NA UTI89_C2334 probable ATPasechromosome CDS2271139 2199 - 0.530241
NA UTI89_C1500 putative capsid assembly protein of prophagechromosome CDS1414166 1506 + 0.605578
NA UTI89_C0513 hypothetical proteinchromosome CDS523533 333 + 0.417417
NA UTI89_C1565 putative outer membrane channel proteinchromosome CDS1477393 1374 + 0.538574
NA UTI89_C1725 putative phage-related secreted proteinchromosome CDS1653886 1245 - 0.451406
NA UTI89_C4906 putative F17-like fimbrial chaperonechromosome CDS4805570 726 - 0.414601
NA UTI89_C4907 putative F17-like fimbrial subunitchromosome CDS4806360 549 - 0.411658
NA UTI89_C2337 putative transport proteinchromosome CDS2275484 1650 + 0.518788
NA UTI89_C0924 putative phage protein gpHchromosome CDS921610 1986 - 0.510574
NA UTI89_C4947 hypothetical proteinchromosome CDS4854179 1767 - 0.565931
aer UTI89_C3510 aerotaxis sensor receptor, flavoproteinchromosome CDS3445355 1521 - 0.550296
aufA UTI89_C3936 Auf fimbriae major subunit precursor AufAchromosome CDS3825098 705 - 0.475177
aufB UTI89_C3935 Auf fimbiral chaperone 1 precursorchromosome CDS3824245 780 - 0.382051
aufC UTI89_C3934 outer membrane usher protein precursor AufCchromosome CDS3821614 2595 - 0.420424
aufD UTI89_C3932 Auf fimbriae minor subunit precursor AufDchromosome CDS3821051 450 - 0.402222
aufF UTI89_C3930 Auf fimbrial chaperone 2 precursorchromosome CDS3819783 801 - 0.395755
betA UTI89_C0340 choline dehydrogenasechromosome CDS351525 1734 - 0.573818
cheA UTI89_C2091 chemotaxis protein CheAchromosome CDS1997894 2019 - 0.530956
cheB UTI89_C2087 protein-glutamate methylesterasechromosome CDS1993361 1050 - 0.535238
cheR UTI89_C2088 chemotaxis protein methyltransferasechromosome CDS1994413 861 - 0.54007
cheW UTI89_C2090 CheW positive regulator of CheA protein activitychromosome CDS1997370 504 - 0.521825
cheZ UTI89_C2085 chemotaxis protein CheZchromosome CDS1992302 675 - 0.536296
cusC UTI89_C0572 probable outer membrane lipoprotein CusC precursorchromosome CDS581179 1383 + 0.515546
ecpD UTI89_C0154 periplasmic chaperone EcpD precursorchromosome CDS161498 741 - 0.442645
fhiA UTI89_C0269 FhiA proteinchromosome CDS280357 1740 - 0.568391
fimA UTI89_C5011 type 1 fimbriae major subunit FimAchromosome CDS4907857 555 + 0.504505
fimC UTI89_C5013 periplasmic chaperone protein FimC precursorchromosome CDS4909052 726 + 0.444904
fimD UTI89_C5014 outer membrane usher protein FimD precursorchromosome CDS4909843 2637 + 0.482746
fimF UTI89_C5015 type 1 fimbriae minor subunit precursor FimFchromosome CDS4912489 531 + 0.491525
fimG UTI89_C5016 type 1 fimbriae minor subunit precursor FimGchromosome CDS4913032 504 + 0.519841
fimI UTI89_C5012 FimI fimbrial proteinchromosome CDS4908368 648 + 0.501543
flgB UTI89_C1198 cell-proximal portion of basal-body rod FlgBchromosome CDS1175986 417 + 0.529976
flgC UTI89_C1199 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1176406 405 + 0.530864
flgD UTI89_C1200 flagellar hook formation protein FlgDchromosome CDS1176822 696 + 0.543103
flgE UTI89_C1201 flagellar biosynthesis, hook proteinchromosome CDS1177542 1206 + 0.513267
flgF UTI89_C1202 flagellar basal-body rod protein FlgFchromosome CDS1178767 756 + 0.59127
flgG UTI89_C1203 flagellar basal body rod protein FlgGchromosome CDS1179694 783 + 0.536398
flgI UTI89_C1205 flagella basal body P-ring-like proteinchromosome CDS1181236 1101 + 0.543143
flgJ UTI89_C1206 peptidoglycan hydrolase FlgJchromosome CDS1182306 972 + 0.538066
flgK UTI89_C1207 hook-filament junction protein 1chromosome CDS1183343 1644 + 0.520073
flgL UTI89_C1208 flagellar hook-associated protein 3chromosome CDS1184998 954 + 0.505241
flgM UTI89_C1196 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1174803 294 - 0.517007
flhA UTI89_C2082 flagellar biosynthesis protein FlhAchromosome CDS1988874 2154 - 0.547818
flhB UTI89_C2083 flagellar biosynthetic protein FlhBchromosome CDS1990945 1149 - 0.550914
fliC UTI89_C2124 flagellinchromosome CDS2025856 1758 - 0.48066
fliE UTI89_C2137 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junctionchromosome CDS2038797 345 - 0.53913
fliF UTI89_C2138 flagellar M-ring proteinchromosome CDS2039326 1659 + 0.548523
fliG UTI89_C2139 flagellar motor switch protein FliGchromosome CDS2040977 996 + 0.562249
fliH UTI89_C2140 flagellar assembly protein FliHchromosome CDS2041944 708 + 0.581921
fliI UTI89_C2141 flagellum-specific ATP synthasechromosome CDS2042651 1374 + 0.583697
fliK UTI89_C2143 flagellar hook-length control proteinchromosome CDS2044483 1128 + 0.545213
fliL UTI89_C2144 flagellar assembly protein FliLchromosome CDS2045715 465 + 0.531183
fliM UTI89_C2145 flagellar motor switch protein FliMchromosome CDS2046139 1050 + 0.527619
fliN UTI89_C2146 flagellar motor switch protein FliNchromosome CDS2047185 414 + 0.565217
fliP UTI89_C2148 flagellar assembly protein FliPchromosome CDS2047966 738 + 0.525745
fliQ UTI89_C2149 flagellar biosynthetic protein FliQchromosome CDS2048713 270 + 0.507407
fliR UTI89_C2150 flagellar biosynthetic protein FliRchromosome CDS2048991 786 + 0.470738
fliS UTI89_C2126 flagellar protein FliSchromosome CDS2029310 411 + 0.481752
fmlA UTI89_C1719 putative Fml fimbriae subunitchromosome CDS1650346 612 - 0.447712
fmlB UTI89_C1718 periplasmic chaperone FmlB proteinchromosome CDS1649274 711 - 0.452883
fmlC UTI89_C1717 putative outer membrane usher FmlC proteinchromosome CDS1647682 1551 - 0.438427
ftsY UTI89_C3979 cell division protein FtsYchromosome CDS3869069 1497 - 0.533734
gspC UTI89_C3386 hypothetical type II secretion protein GspCchromosome CDS3315744 831 - 0.522262
gspD UTI89_C3385 hypothetical type II secretion protein GspDchromosome CDS3313654 2061 - 0.545852
gspE UTI89_C3384 hypothetical type II secretion protein GspEchromosome CDS3312161 1494 - 0.572959
gspF UTI89_C3383 hypothetical type II secretion protein GspFchromosome CDS3310938 1224 - 0.585784
gspG UTI89_C3382 hypothetical type II secretion protein GspGchromosome CDS3310466 456 - 0.526316
gspH UTI89_C3381 hypothetical type II secretion protein GspHchromosome CDS3309899 564 - 0.556738
gspJ UTI89_C3379 hypothetical type II secretion protein GspJchromosome CDS3308929 570 - 0.564912
gspK UTI89_C3378 hypothetical proteinchromosome CDS3307955 978 - 0.556237
gspM UTI89_C3376 putative secretion pathway proteinchromosome CDS3306242 537 - 0.530726
hofB UTI89_C0114 transport protein HofBchromosome CDS118037 1386 - 0.533911
hofC UTI89_C0113 protein transport protein HofCchromosome CDS116845 1203 - 0.521197
hofD UTI89_C3790 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3683371 678 + 0.504425
hofF UTI89_C3782 putative general secretion pathway protein Fchromosome CDS3677627 1197 + 0.506266
hofG UTI89_C3783 putative general secretion pathway protein G precursorchromosome CDS3678833 438 + 0.493151
hofQ UTI89_C3889 protein transport protein HofQ precursorchromosome CDS3772133 1239 - 0.536723
htrE UTI89_C0153 outer membrane usher protein HtrE precursorchromosome CDS158875 2589 - 0.448436
lepA UTI89_C2891 GTP-binding elongation factor LepAchromosome CDS2847067 1800 - 0.532778
lpxK UTI89_C0986 tetraacyldisaccharide 4'-kinasechromosome CDS972871 987 + 0.552178
malK UTI89_C4605 maltose/maltodextrin transport ATP-binding protein malKchromosome CDS4497388 1206 + 0.544776
mbhA UTI89_C0270 putative motility protein MbhAchromosome CDS282038 789 + 0.523447
motA UTI89_C2093 chemotaxis MotA proteinchromosome CDS2000786 888 - 0.51464
motB UTI89_C2092 chemotaxis MotB proteinchromosome CDS1999863 927 - 0.530744
msbB UTI89_C2059 myristoyl acyltransferase; (KDO)2-(lauroyl)-lipid IVA acyltransferasechromosome CDS1965911 972 - 0.50823
papA UTI89_C4895 major pilin subunit PapAchromosome CDS4796467 564 - 0.443262
papD UTI89_C4892 periplasmid chaperone PapD proteinchromosome CDS4792443 720 - 0.459722
papK UTI89_C4890 minor pilin subunit PapKchromosome CDS4791279 537 - 0.541899
ppdA UTI89_C3227 prepilin peptidase dependent protein A precursorchromosome CDS3154143 471 - 0.541401
ppdB UTI89_C3226 prepilin peptidase dependent protein B precursorchromosome CDS3153589 588 - 0.52551
ppdD UTI89_C0115 prelipin peptidase dependent proteinchromosome CDS119432 441 - 0.526077
secA UTI89_C0107 preprotein translocase; secretion proteinchromosome CDS110721 2706 + 0.521434
secB UTI89_C4151 protein-export protein SecBchromosome CDS4045376 528 - 0.498106
sfaA UTI89_C1109 S fimbriae major subunit SfaAchromosome CDS1099351 546 + 0.434066
sfaD UTI89_C1110 S fimbriae minor subunit SfaDchromosome CDS1099958 549 + 0.495446
sfaE UTI89_C1111 S fimbriae periplasmic chaperone SfaEchromosome CDS1100547 696 + 0.445402
sfaF UTI89_C1112 S fimbriae outer membrane usherchromosome CDS1101264 2679 + 0.521463
sfaG UTI89_C1113 S fimbriae minor subunit SfaGchromosome CDS1103955 528 + 0.467803
sfaS UTI89_C1114 S fimbriae minor subunit SfaSchromosome CDS1104504 492 + 0.408537
sohB UTI89_C1540 possible protease SohBchromosome CDS1450279 1050 + 0.504762
tar UTI89_C2089 methyl-accepting chemotaxis protein IIchromosome CDS1995564 1683 - 0.521687
tatA UTI89_C4423 sec-independent twin-arginine translocase subunit tatAchromosome CDS4308330 312 + 0.448718
tatC UTI89_C4425 sec-independent protein twin-arginine translocase subunit tatCchromosome CDS4309163 777 + 0.519949
tolC UTI89_C3469 outer membrane protein TolC precursorchromosome CDS3403815 1521 + 0.512163
traC UTI89_P117 F pilus assembly protein TraCpUTI89 CDS85980 2631 + 0.540099
tsr UTI89_C5058 Tsr, subunit of methyl-accepting chemotaxis protein Ichromosome CDS4965724 1656 + 0.54529
ugpC UTI89_C3957 SN-glycerol-3-phosphate transport ATP-binding protein ugpCchromosome CDS3849354 1110 - 0.573874
yadM UTI89_C0152 putative fimbrial subunit YadM precursorchromosome CDS158292 567 - 0.414462
yadN UTI89_C0155 putative fimbrial subunit YadN precursorchromosome CDS162347 615 - 0.426016
ybbJ UTI89_C0523 hypothetical protein YbbJchromosome CDS532385 459 - 0.575163
ycjV UTI89_C1589 hypothetical ABC transporter ATP-binding protein ycjVchromosome CDS1500135 1083 + 0.497692
yehB UTI89_C2383 putative outer membrane usher protein YehB precursorchromosome CDS2329188 2496 - 0.452324
yehC UTI89_C2384 putative periplasmic chaperone YehC precursorchromosome CDS2331684 675 - 0.38963
yfcS UTI89_C2621 putative periplasmic chaperone YfcS precursorchromosome CDS2584254 753 - 0.555113
yfcU UTI89_C2622 putative outer membrane usher YfcU precursorchromosome CDS2585026 2655 - 0.543503
yggR UTI89_C3339 hypothetical protein YggRchromosome CDS3271742 1056 - 0.545455
yghS UTI89_C3407 hypothetical ATP-binding protein YghSchromosome CDS3344056 714 - 0.497199
ygiL UTI89_C3479 putative Yqi fimbriae subunit YgiL precursorchromosome CDS3413527 564 + 0.443262
yheF UTI89_C3780 probable general secretion pathway protein Dchromosome CDS3674175 1965 + 0.498219
yheG UTI89_C3781 probable general secretion pathway protein Echromosome CDS3676149 1482 + 0.522942
yheH UTI89_C3785 probable general secretion pathway protein I precursorchromosome CDS3679745 435 + 0.487356
yheI UTI89_C3786 probable general secretion pathway protein J precursorchromosome CDS3680172 588 + 0.5
yheJ UTI89_C3787 probable general secretion pathway protein K precursorchromosome CDS3680752 984 + 0.496951
yheK UTI89_C3788 probable general secretion pathway protein Lchromosome CDS3681747 1167 + 0.48329
yifL UTI89_C4371 hypothetical lipoproteinchromosome CDS4257865 204 + 0.534314
yjcP UTI89_C4675 putative enzymechromosome CDS4573927 1467 - 0.559646
yohG UTI89_C2412 putative channel/filament proteinschromosome CDS2368514 1527 - 0.541585
yqiG UTI89_C3480 putative outer membrane usher protein YqiG precursorchromosome CDS3414177 2523 + 0.468886
yqiH UTI89_C3481 putative periplasmic chaperone YqiH precursorchromosome CDS3416706 750 + 0.478667
yrbC UTI89_C3628 hypothetical proteinchromosome CDS3556934 636 - 0.522013
yrbF UTI89_C3631 putative ATP-binding component of a transport systemchromosome CDS3558934 810 - 0.545679
 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
cheA fused chemotactic sensory histidine kinase (soluble) in two-component regulatory system with CheB and CheYchromosome CDS1975074 1965 - 0.531298
cheB fused chemotaxis regulator and protein-glutamate methylesterase in two-component regulatory system with CheAchromosome CDS1969166 1050 - 0.542857
cheR chemotaxis regulatorchromosome CDS1970218 861 - 0.542393
cheW purine-binding chemotaxis proteinchromosome CDS1974550 504 - 0.519841
cheZ chemotaxis regulatorchromosome CDS1968107 645 - 0.534884
cpxP periplasmic protein combats stresschromosome CDS3530361 501 - 0.500998
ecpD predicted periplasmic pilin chaperonechromosome CDS155461 741 - 0.443995
fimA major type 1 subunit fimbrinchromosome CDS4547795 549 + 0.517304
fimC chaperone, periplasmicchromosome CDS4548984 726 + 0.444904
fimD outer membrane usher protein, type 1 fimbrial synthesischromosome CDS4549776 2637 + 0.486159
fimF minor component of type 1 fimbriaechromosome CDS4552422 531 + 0.495292
fimG minor component of type 1 fimbriaechromosome CDS4552965 504 + 0.52381
fimI fimbrial protein involved in type 1 pilus biosynthesischromosome CDS4548408 540 + 0.492593
flgA assembly protein for flagellar basal-body periplasmic P ringchromosome CDS1131781 660 - 0.522727
flgB flagellar component of cell-proximal portion of basal-body rodchromosome CDS1132595 417 + 0.534772
flgC flagellar component of cell-proximal portion of basal-body rodchromosome CDS1133015 405 + 0.528395
flgD flagellar hook assembly proteinchromosome CDS1133431 696 + 0.545977
flgE flagellar hook proteinchromosome CDS1134151 1209 + 0.515302
flgF flagellar component of cell-proximal portion of basal-body rodchromosome CDS1135379 756 + 0.59127
flgG flagellar component of cell-distal portion of basal-body rodchromosome CDS1136306 783 + 0.537676
flgH flagellar protein of basal-body outer-membrane L ringchromosome CDS1137141 699 + 0.53505
flgI predicted flagellar basal body proteinchromosome CDS1137851 1098 + 0.541894
flgJ muramidasechromosome CDS1138948 942 + 0.546709
flgK flagellar hook-filament junction protein 1chromosome CDS1139955 1644 + 0.518248
flgL flagellar hook-filament junction proteinchromosome CDS1141610 954 + 0.507338
flgM anti-sigma factor for FliA (sigma 28)chromosome CDS1131412 294 - 0.527211
flgN export chaperone for FlgK and FlgLchromosome CDS1130991 417 - 0.482014
flhA predicted flagellar export pore proteinchromosome CDS1964686 2079 - 0.548822
flhB predicted flagellar export pore proteinchromosome CDS1966757 1149 - 0.549173
fliC flagellar filament structural proteinchromosome CDS2004247 1497 - 0.47495
fliD flagellar filament capping proteinchromosome CDS2006009 1407 + 0.522388
fliE flagellar basal-body componentchromosome CDS2014837 315 - 0.539683
fliF flagellar basal-body MS-ring and collar proteinchromosome CDS2015366 1659 + 0.546112
fliG flagellar motor switching and energizing componentchromosome CDS2017017 996 + 0.556225
fliH flagellar biosynthesis proteinchromosome CDS2018005 687 + 0.570597
fliI flagellum-specific ATP synthasechromosome CDS2018691 1374 + 0.585881
fliJ flagellar proteinchromosome CDS2020083 444 + 0.515766
fliK flagellar hook-length control proteinchromosome CDS2020523 1128 + 0.548759
fliL flagellar biosynthesis proteinchromosome CDS2021755 465 + 0.533333
fliM flagellar motor switching and energizing componentchromosome CDS2022224 1005 + 0.533333
fliN flagellar motor switching and energizing componentchromosome CDS2023225 414 + 0.550725
fliO flagellar biosynthesis proteinchromosome CDS2023641 366 + 0.546448
fliP flagellar biosynthesis proteinchromosome CDS2024006 738 + 0.531165
fliQ flagellar biosynthesis proteinchromosome CDS2024753 270 + 0.503704
fliR flagellar export pore proteinchromosome CDS2025030 786 + 0.474555
fliS flagellar protein potentiates polymerizationchromosome CDS2007440 411 + 0.498783
gspD general secretory pathway component, crypticchromosome CDS4182087 1953 - 0.501792
gspE general secretory pathway component, crypticchromosome CDS4180596 1482 - 0.524966
gspF general secretory pathway component, crypticchromosome CDS4179403 1197 - 0.510443
gspG pseudopilin, cryptic, general secretion pathwaychromosome CDS4178956 438 - 0.486301
gspH predicted general secretory pathway component, crypticchromosome CDS4178439 510 - 0.560784
gspI general secretory pathway component, crypticchromosome CDS4178065 378 - 0.478836
gspO bifunctional prepilin leader peptidase and methylasechromosome CDS4174196 678 - 0.504425
hofB conserved hypothetical protein with nucleoside triphosphate hydrolase domainchromosome CDS115714 1386 - 0.534632
hofC assembly protein in type IV pilin biogenesis, transmembrane proteinchromosome CDS114522 1203 - 0.519534
htrE predicted outer membrane usher proteinchromosome CDS152829 2598 - 0.43341
motA proton conductor component of flagella motorchromosome CDS1977966 888 - 0.513514
motB protein that enables flagellar motor rotationchromosome CDS1977043 927 - 0.531823
nfrB bacteriophage N4 receptor, inner membrane subunitchromosome CDS590164 2238 - 0.525022
ppdA hypothetical proteinchromosome CDS2962363 471 - 0.541401
ppdC hypothetical proteinchromosome CDS2961097 324 - 0.549383
ppdD predicted major pilin subunitchromosome CDS117109 441 - 0.530612
pppA bifunctional prepilin leader peptidase and methylasechromosome CDS3112199 810 - 0.517284
sfmA predicted fimbrial-like adhesin proteinchromosome CDS557435 543 + 0.445672
sfmC pilin chaperone, periplasmicchromosome CDS558197 693 + 0.425685
sfmD predicted outer membrane export usher proteinchromosome CDS558920 2604 + 0.478111
sfmF predicted fimbrial-like adhesin proteinchromosome CDS562553 516 + 0.5
sfmH predicted fimbrial-like adhesin proteinchromosome CDS561565 978 + 0.453988
spy envelope stress induced periplasmic proteinchromosome CDS1826854 486 - 0.50823
tap methyl-accepting protein IVchromosome CDS1971097 1602 - 0.535581
tar methyl-accepting chemotaxis protein IIchromosome CDS1972744 1662 - 0.527677
tolC transport channelchromosome CDS3176771 1482 + 0.513495
trg methyl-accepting chemotaxis protein III, ribose and galactose sensor receptorchromosome CDS1494184 1641 + 0.512492
tsr methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4596337 1656 + 0.546498
wzc protein-tyrosine kinasechromosome CDS2135627 2163 - 0.526583
yadC predicted fimbrial-like adhesin proteinchromosome CDS149715 1239 - 0.403551
yadN predicted fimbrial-like adhesin proteinchromosome CDS156299 585 - 0.447863
yagX predicted aromatic compound dioxygenasechromosome CDS306031 2526 - 0.552652
ybaQ predicted DNA-binding transcriptional regulatorchromosome CDS507442 342 + 0.447368
ybgD predicted fimbrial-like adhesin proteinchromosome CDS752651 567 - 0.467372
ybgP predicted assembly proteinchromosome CDS749401 729 - 0.477366
ybgQ predicted outer membrane proteinchromosome CDS750144 2448 - 0.499591
ycbF predicted periplasmic pilini chaperonechromosome CDS1004369 711 + 0.517581
ycbQ predicted fimbrial-like adhesin proteinchromosome CDS998290 540 + 0.424074
ycbR predicted periplasmic pilin chaperonechromosome CDS998912 702 + 0.450142
ycbS predicted outer membrane usher proteinchromosome CDS999638 2601 + 0.478662
ycbU predicted fimbrial-like adhesin proteinchromosome CDS1003311 543 + 0.471455
ydeR predicted fimbrial-like adhesin proteinchromosome CDS1589507 504 - 0.448413
ydeS predicted fimbrial-like adhesin proteinchromosome CDS1590023 531 - 0.448211
ydeT hypothetical proteinchromosome CDS1590567 1149 - 0.445605
yehB predicted outer membrane proteinchromosome CDS2191764 2481 - 0.455058
yehC predicted periplasmic pilin chaperonechromosome CDS2194260 720 - 0.393056
yehD predicted fimbrial-like adhesin proteinchromosome CDS2195014 543 - 0.405157
yfcP predicted fimbrial-like adhesin proteinchromosome CDS2455497 540 - 0.487037
yfcQ predicted fimbrial-like adhesin proteinchromosome CDS2456033 489 - 0.466258
yfcR predicted fimbrial-like adhesin proteinchromosome CDS2456518 513 - 0.491228
yfcS predicted periplasmic pilus chaperonechromosome CDS2457030 753 - 0.50996
yfcT predicted outer membrane export usher proteinchromosome CDS2457802 897 - 0.532887
yfcU predicted export usher proteinchromosome CDS2458711 1737 - 0.510075
yfcV predicted fimbrial-like adhesin proteinchromosome CDS2460529 564 - 0.460993
yfjD predicted inner membrane proteinchromosome CDS2747520 1197 + 0.517962
yfjI hypothetical proteinchromosome CDS2757641 1410 + 0.379433
yggR predicted transporterchromosome CDS3092756 981 - 0.554536
yghE chromosome pseudo3109784 861 - 0.57259
yghE chromosome pseudo3109784 861 - 0.57259
ygiL predicted fimbrial-like adhesin proteinchromosome CDS3184070 552 + 0.436594
yhcA predicted periplasmic chaperone proteinchromosome CDS3361967 675 + 0.416296
yhcD predicted outer membrane proteinchromosome CDS3362662 2382 + 0.45508
yifL predicted lipoproteinchromosome CDS3641956 204 - 0.52451
ymfL predicted DNA-binding transcriptional regulatorchromosome CDS1204833 570 + 0.494737
ymjB hypothetical proteinchromosome CDS1383503 114 + 0.368421
ynaA predicted tail proteinchromosome CDS1428168 1029 + 0.468416
yohG predicted outer membrane proteinchromosome CDS2230657 1089 - 0.557392
yqiG predicted outer membrane usher proteinchromosome CDS3186056 2466 + 0.422141
yqiH predicted periplasmic pilin chaperonechromosome CDS3188537 750 + 0.386667
yraH predicted fimbrial-like adhesin proteinchromosome CDS3287281 585 + 0.451282
yraI predicted periplasmic pilin chaperonechromosome CDS3287945 696 + 0.442529
yraJ predicted outer membrane proteinchromosome CDS3288669 2517 + 0.475963
yraK predicted fimbrial-like adhesin proteinchromosome CDS3291196 1092 + 0.478938
yrbF predicted toluene transporter subunitchromosome CDS3339111 810 - 0.545679
yrfB hypothetical proteinchromosome CDS4118967 441 + 0.546485
yrfC predicted fimbrial assembly proteinchromosome CDS4118444 540 + 0.553704
zraP Zn-binding periplasmic proteinchromosome CDS3434993 426 + 0.535211
 
Escherichia coli, B171
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
bfpB pB171_005 BfpBpB171 CDS3750 1659 + 0.417119
bfpD pB171_008 BfpDpB171 CDS7095 1605 + 0.3919
bfpE pB171_009 BfpEpB171 CDS8706 1059 + 0.395656
bfpF pB171_010 BfpFpB171 CDS9748 996 + 0.409639
bfpJ pB171_014 BfpJpB171 CDS12490 552 + 0.358696
bfpP pB171_011 prepilin peptidasepB171 CDS10750 750 + 0.373333
bfpU pB171_007 BfpUpB171 CDS6615 471 + 0.33121
 
Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu0415 hypothetical proteinchromosome CDS442724 759 - 0.479578
NA plu1854 hypothetical proteinchromosome CDS2202807 1635 + 0.437309
NA plu0093 hypothetical proteinchromosome CDS87563 555 - 0.394595
NA plu0784 hypothetical proteinchromosome CDS901098 2643 + 0.579644
NA plu0782 hypothetical proteinchromosome CDS899467 735 + 0.572789
NA plu2143 hypothetical proteinchromosome CDS2525733 621 - 0.363929
NA plu0790 hypothetical proteinchromosome CDS908129 858 + 0.536131
NA plu3631 hypothetical proteinchromosome CDS4280806 717 + 0.527197
NA plu3630 hypothetical proteinchromosome CDS4280090 387 + 0.423773
NA plu0268 hypothetical proteinchromosome CDS283299 2631 + 0.516914
NA plu0262 hypothetical proteinchromosome CDS278598 741 + 0.460189
NA plu3025 hypothetical proteinchromosome CDS3525239 1437 - 0.424495
NA plu4220 hypothetical proteinchromosome CDS4934952 2601 - 0.466744
NA plu1181 hypothetical proteinchromosome CDS1364634 1038 + 0.454721
NA plu0267 hypothetical proteinchromosome CDS282321 795 + 0.469182
NA plu2156 hypothetical proteinchromosome CDS2539370 993 - 0.373615
NA plu0748 hypothetical proteinchromosome CDS862964 1035 + 0.422222
NA plu3803 hypothetical proteinchromosome CDS4468914 1854 + 0.420173
NA plu0416 hypothetical proteinchromosome CDS443812 2589 - 0.500579
NA plu0417 hypothetical proteinchromosome CDS446415 603 - 0.474295
NA plu1734 hypothetical proteinchromosome CDS2069910 1176 + 0.469388
NA plu2157 hypothetical proteinchromosome CDS2540382 2541 - 0.37741
NA plu0094 hypothetical proteinchromosome CDS88117 831 - 0.45728
NA plu0780 hypothetical proteinchromosome CDS898142 720 + 0.547222
NA plu1374 hypothetical proteinchromosome CDS1653561 402 + 0.462687
NA plu1186 hypothetical proteinchromosome CDS1368836 612 + 0.325163
NA plu0783 hypothetical proteinchromosome CDS900232 783 + 0.583653
NA plu1742 hypothetical proteinchromosome CDS2077196 1098 + 0.479053
NA plu1738 hypothetical proteinchromosome CDS2072176 1605 + 0.489097
NA plu2158 hypothetical proteinchromosome CDS2542960 675 - 0.373333
NA plu2159 hypothetical proteinchromosome CDS2543749 531 - 0.393597
NA plu2885 hypothetical proteinchromosome CDS3417860 276 + 0.394928
NA plu1733 Type 4 prepilin-like proteins leader peptide processing enzyme (Pectic enzyme secretion protein outO) [Includes: Leader peptidase (Prepilin peptidase)chromosome CDS2069076 795 + 0.506918
NA plu0506 hypothetical proteinchromosome CDS556388 699 - 0.354793
NA plu3443 hypothetical proteinchromosome CDS4056687 546 - 0.457875
NA plu0787 hypothetical proteinchromosome CDS906027 717 + 0.524407
NA plu0789 hypothetical proteinchromosome CDS907349 750 + 0.548
NA plu1741 hypothetical proteinchromosome CDS2075627 1563 + 0.513116
NA plu2230 hypothetical proteinchromosome CDS2622631 1398 - 0.353362
NA plu0505 hypothetical proteinchromosome CDS553888 2475 - 0.407273
NA plu0507 hypothetical proteinchromosome CDS557154 582 - 0.398625
NA plu0791 hypothetical proteinchromosome CDS909069 2643 + 0.540295
NA plu0418 hypothetical proteinchromosome CDS447141 567 - 0.492063
NA plu4641 hypothetical proteinchromosome CDS5409625 186 - 0.44086
NA plu2056 hypothetical proteinchromosome CDS2428219 1941 + 0.406491
NA plu2022 hypothetical proteinchromosome CDS2390996 918 + 0.413943
NA plu0266 hypothetical proteinchromosome CDS281565 720 + 0.488889
cheA plu1851 Chemotaxis protein cheAchromosome CDS2198280 2052 + 0.44883
cheB plu1856 chemotaxis-specific methylesterasechromosome CDS2205328 1053 + 0.453941
cheD plu1853 Methyl-accepting chemotaxis protein I (MCP-I) (Serine chemoreceptor protein)chromosome CDS2201059 1695 + 0.421239
cheR plu1855 Chemotaxis protein methyltransferasechromosome CDS2204448 888 + 0.434685
cheW plu1852 purine binding chemotaxis proteinchromosome CDS2200385 498 + 0.407631
cheZ plu1858 Chemotaxis protein CheZchromosome CDS2207099 651 + 0.463902
cpxP plu4793 periplasmic protein precursorchromosome CDS5566624 495 - 0.438384
flgA plu1914 Flagella basal body P-ring formation protein FlgA precursorchromosome CDS2281063 660 - 0.422727
flgB plu1915 flagellar basal body rod proteinchromosome CDS2281971 414 + 0.475845
flgC plu1916 flagellar basal body rod proteinchromosome CDS2282390 405 + 0.479012
flgD plu1917 Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly)chromosome CDS2282807 696 + 0.468391
flgE plu1918 flagellar hook proteinchromosome CDS2283530 1215 + 0.461728
flgF plu1919 Flagellar basal-body rod protein FlgF (Putative proximal rod protein)chromosome CDS2284763 756 + 0.515873
flgG plu1920 Flagellar basal-body rod protein FlgG (Distal rod protein)chromosome CDS2285542 783 + 0.435504
flgH plu1921 flagellar L-ring protein precursorchromosome CDS2286399 753 + 0.478088
flgI plu1922 flagellar P-ring protein precursorchromosome CDS2287164 1110 + 0.481982
flgJ plu1923 flagellar biosynthesis proteinchromosome CDS2288270 945 + 0.485714
flgK plu1924 flagellar hook-associated proteinchromosome CDS2289341 1650 + 0.41697
flgL plu1925 flagellar hook-associated proteinchromosome CDS2291065 966 + 0.438923
flgM plu1913 Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgMchromosome CDS2280636 303 - 0.448845
flgN plu1912 Flagella synthesis protein FlgNchromosome CDS2280184 441 - 0.446712
flhA plu1896 flagellar biosynthesis proteinchromosome CDS2257556 2082 + 0.48463
flhB plu1895 flagellar biosynthesis proteinchromosome CDS2256412 1152 + 0.469618
fliC plu1954 flagellinchromosome CDS2319961 1068 + 0.445693
fliD plu1953 flagellar hook-associated proteinchromosome CDS2318265 1422 - 0.405063
fliE plu1949 flagellar hook-basal body 11K protein FliEchromosome CDS2315342 312 + 0.439103
fliF plu1948 flagellar M-ring proteinchromosome CDS2313353 1704 - 0.491784
fliG plu1947 flagellar motor proteinchromosome CDS2312364 993 - 0.488419
fliH plu1946 flagellar assembly proteinchromosome CDS2311667 705 - 0.50922
fliI plu1945 flagellum-specific ATP synthasechromosome CDS2310303 1365 - 0.531868
fliJ plu1944 flagellar proteinchromosome CDS2309817 444 - 0.45045
fliK plu1943 Flagellar hook-length control protein FliKchromosome CDS2308489 1329 - 0.471031
fliL plu1942 flagellar biosynthesis proteinchromosome CDS2307839 477 - 0.471698
fliM plu1941 flagellar motor switch proteinchromosome CDS2306829 1005 - 0.478607
fliN plu1940 flagellar motor switch proteinchromosome CDS2306417 420 - 0.47381
fliO plu1939 flagellar FliO proteinchromosome CDS2305963 348 - 0.448276
fliP plu1938 flagellar biosynthesis proteinchromosome CDS2305197 735 - 0.469388
fliQ plu1937 flagellar biosynthesis proteinchromosome CDS2304907 270 - 0.47037
fliR plu1936 flagellar biosynthesis proteinchromosome CDS2304122 783 - 0.443167
fliS plu1952 flagellar protein FliSchromosome CDS2317842 411 - 0.437956
hofB plu3639 Protein transport protein HofBchromosome CDS4286662 1443 + 0.362439
hofC plu3640 Protein transport protein HofCchromosome CDS4288107 1200 + 0.349167
motA plu1849 flagellar motor proteinchromosome CDS2196392 888 + 0.435811
motB plu1850 flagellar motor proteinchromosome CDS2197276 1002 + 0.4501
mrfA plu0769 MrfA proteinchromosome CDS888552 540 + 0.481481
mrfB plu0770 MrfB proteinchromosome CDS889175 549 + 0.495446
mrfC plu0771 Outer membrane usher protein MrfCchromosome CDS889743 2556 + 0.491784
mrfD plu0772 MrfD proteinchromosome CDS892422 750 + 0.498667
mrfG plu0776 MrfG proteinchromosome CDS894875 546 + 0.43956
phfA plu0994 hypothetical proteinchromosome CDS1177360 981 - 0.317023
phfB plu0993 hypothetical proteinchromosome CDS1175942 1011 - 0.351137
phfC plu0996 hypothetical proteinchromosome CDS1180887 669 - 0.384155
phfD plu0995 hypothetical proteinchromosome CDS1178368 2514 - 0.389021
phfS plu0997 hypothetical proteinchromosome CDS1181612 510 - 0.364706
pilN plu1051 hypothetical proteinchromosome CDS1229437 1704 + 0.502347
pilQ plu1054 hypothetical proteinchromosome CDS1232966 1554 + 0.51287
pilR plu1055 hypothetical proteinchromosome CDS1234512 1086 + 0.494475
pilU plu1057 hypothetical proteinchromosome CDS1236269 666 + 0.489489
ppdA plu0626 Prepilin peptidase dependent protein A precursorchromosome CDS711641 516 + 0.350775
ppdC plu0629 Prepilin peptidase dependent protein C precursorchromosome CDS713393 378 + 0.388889
ppdD plu3638 Prepilin peptidase dependent protein D precursorchromosome CDS4286072 423 + 0.323877
sctC plu3778 Type III secretion component protein SctCchromosome CDS4444107 1845 + 0.479133
sctL plu3787 type III secretion proteinchromosome CDS4450350 618 + 0.466019
sctN plu3767 type III secretion system ATPasechromosome CDS4434397 1323 + 0.507937
sctP plu3769 Type III secretion component protein SctPchromosome CDS4436192 1131 + 0.49779
sctQ plu3770 type III secretion proteinchromosome CDS4437319 933 + 0.493033
sctW plu3766 Type III secretion control protein SctWchromosome CDS4433095 873 - 0.468499
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
pefC SCV25 outer membrane usher protein PefC precursorpSCV50 CDS19732 2409 + 0.600664
pefD SCV26 chaperone protein FanE precursorpSCV50 CDS22142 684 + 0.580409
traP SC068 TraP-like proteinpSC138 CDS53264 705 - 0.50922
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC0275 hypothetical proteinchromosome CDS315511 1305 + 0.594636
NA SC2596 putative bacteriophage proteinchromosome CDS2761217 1953 - 0.526882
NA SC0105 hypothetical proteinchromosome CDS123054 282 + 0.439716
bcfA SC0020 fimbrial subunitchromosome CDS24470 543 + 0.521179
bcfB SC0021 fimbrial chaparonechromosome CDS24972 828 + 0.509662
bcfD SC0022 fimbrial subunitchromosome CDS28426 1008 + 0.501984
bcfE SC0023 fimbrial subunitchromosome CDS29434 546 + 0.492674
bcfF SC0024 fimbrial subunitchromosome CDS29995 519 + 0.558767
bcfG SC0025 fimbrial chaparonechromosome CDS30479 732 + 0.54235
cheA SC1928 sensory histitine protein kinase, transduces signal between chemo- signal receptors and CheB and CheYchromosome CDS2039758 2016 - 0.550099
cheB SC1924 chemotaxis-specific methylesterasechromosome CDS2035270 1050 - 0.559048
cheM SC1926 methyl accepting chemotaxis protein II, aspartate sensor-receptorchromosome CDS2037336 1893 - 0.554147
cheR SC1925 glutamate methyltransferase, response regulator for chemotaxischromosome CDS2036316 867 - 0.527105
cheV SC2314 putative chemotaxis signal transduction proteinchromosome CDS2434922 1002 + 0.51996
cheW SC1927 purine-binding chemotaxis protein; regulationchromosome CDS2039234 504 - 0.525794
cheZ SC1922 chemotactic response; CheY protein phophatasechromosome CDS2034208 567 - 0.585538
cpxP SC3951 periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresseschromosome CDS4203638 501 + 0.50499
csgA SC1092 curlin major subunit, coiled surface structures; crypticchromosome CDS1211715 456 + 0.513158
fimA SC0582 major type 1 subunit fimbrin (pilin)chromosome CDS648395 624 + 0.533654
fimD SC0585 outer membrane usher proteinchromosome CDS651732 2619 + 0.556319
fimF SC0587 putative fimbrial proteinchromosome CDS655382 519 + 0.552987
fimF SC4440 putative fimbrial chaparone proteinchromosome CDS4751117 546 - 0.501832
fimH SC0586 minor fimbrial subunitchromosome CDS654365 1008 + 0.516865
fimI SC0583 fimbrial protein internal segmentchromosome CDS649094 534 + 0.543071
flgA SC1120 flagellar basal body P-ring biosynthesis proteinchromosome CDS1237485 660 - 0.578788
flgB SC1121 flagellar basal body rod proteinchromosome CDS1238301 417 + 0.52518
flgC SC1122 flagellar basal body rod proteinchromosome CDS1238721 405 + 0.558025
flgD SC1123 flagellar basal body rod modification proteinchromosome CDS1239137 699 + 0.540773
flgE SC1124 flagellar hook proteinchromosome CDS1239862 1212 + 0.552805
flgF SC1125 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1241094 756 + 0.60582
flgG SC1126 flagellar biosynthesis, cell-distal portion of basal-body rodchromosome CDS1241863 783 + 0.564496
flgH SC1127 flagellar L-ring protein precursorchromosome CDS1242691 708 + 0.542373
flgI SC1128 flagellar P-ring protein precursorchromosome CDS1243404 1104 + 0.578804
flgJ SC1129 flagellar biosynthesis proteinchromosome CDS1244507 951 + 0.561514
flgK SC1130 flagellar hook-associated proteinchromosome CDS1245522 1662 + 0.518652
flgL SC1131 flagellar hook-associated proteinchromosome CDS1247198 954 + 0.536688
flgM SC1119 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1237100 294 - 0.517007
flgN SC1118 flagellar biosynthesis: belived to be export chaperone for FlgK and FlgLchromosome CDS1236673 423 - 0.539007
flhA SC1920 flagellar biosynthesis proteinchromosome CDS2030792 2079 - 0.562771
flhB SC1921 flagellar biosynthesis proteinchromosome CDS2032863 1152 - 0.560764
fliC+F2048 SC1962 flagellar biosynthesis proteinchromosome CDS2069412 1506 - 0.488048
fliD SC1964 flagellar hook-associated proteinchromosome CDS2071174 1404 + 0.494302
fliE SC1972 flagellar basal body proteinchromosome CDS2077769 315 - 0.546032
fliF SC1974 flagellar M-ring proteinchromosome CDS2078300 1683 + 0.571004
fliG SC1975 flagellar motor proteinchromosome CDS2079975 996 + 0.547189
fliH SC1976 flagellar assembly proteinchromosome CDS2080963 708 + 0.607345
fliI SC1977 flagellum-specific ATP synthasechromosome CDS2081670 1371 + 0.596645
fliJ SC1978 flagellar proteinchromosome CDS2083062 444 + 0.513514
fliK SC1979 flagellar hook-length control proteinchromosome CDS2083502 1218 + 0.615764
fliL SC1980 flagellar biosynthesis proteinchromosome CDS2084764 528 + 0.543561
fliM SC1981 flagellar motor switch proteinchromosome CDS2085296 1005 + 0.533333
fliN SC1982 flagellar motor switch proteinchromosome CDS2086297 414 + 0.543478
fliO SC1983 flagellar biosynthesischromosome CDS2086710 378 + 0.603175
fliP SC1984 flagellar biosynthesis proteinchromosome CDS2087087 738 + 0.536585
fliQ SC1985 flagellar biosynthesis proteinchromosome CDS2087834 270 + 0.518519
fliR SC1986 flagellar biosynthesis proteinchromosome CDS2088112 795 + 0.515723
fliS SC1965 flagellar protein FliSchromosome CDS2072592 408 + 0.495098
hofB SC0142 putative integral membrane protein involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptakechromosome CDS162377 1386 - 0.553391
hofC SC0141 putative component in type IV pilin biogenesischromosome CDS161185 1203 - 0.540316
hopD SC3376 leader peptidase HopDchromosome CDS3551227 594 + 0.521886
invC SC2826 type III secretion system ATPasechromosome CDS2990205 1296 - 0.544753
invG SC2830 invasion protein; outer membranechromosome CDS2995125 1689 - 0.462404
lpfA SC3571 long polar fimbriachromosome CDS3778230 537 - 0.463687
lpfB SC3570 long polar fimbrial chaperonechromosome CDS3777447 699 - 0.449213
lpfE SC3568 long polar fimbrial minor proteinchromosome CDS3773266 528 - 0.511364
mac SC3079 putative methyl-accepting chemotaxis proteinchromosome CDS3260089 1056 - 0.427083
mcp SC1652 putative methyl-accepting chemotaxis proteinchromosome CDS1764539 1077 - 0.47818
mcp1 SC3094 putative methyl-accepting chemotaxis proteinchromosome CDS3273782 1644 - 0.569343
mcp2 SC3162 putative methyl-accepting chemotaxis proteinchromosome CDS3342869 1566 - 0.506386
motA SC1930 flagellar motor proteinchromosome CDS2042704 888 - 0.513514
motB SC1929 flagellar motor proteinchromosome CDS2041778 930 - 0.545161
orgB SC2801 putative flagellar biosynthesis/type III secretory pathway proteinchromosome CDS2967315 681 - 0.449339
ppdA SC2938 prepilin peptidase dependent protein A, putative component in type IV pilin biogenesischromosome CDS3117055 471 - 0.55414
ppdD SC0143 putative major component of type IV pilin, prelipin peptidase dependent proteinchromosome CDS163772 438 - 0.541096
safB SC0293 putative fimbriae assembly chaparonechromosome CDS337447 738 + 0.47832
safC SC0294 putative fimbriae usherchromosome CDS338208 2511 + 0.543608
sipB SC2817 cell invasion proteinchromosome CDS2982642 1782 - 0.517957
spaO SC2823 type III secretion proteinchromosome CDS2987863 912 - 0.529605
spaS SC2819 type III secretion proteinchromosome CDS2985061 1071 - 0.434174
spy SC1329 periplasmic protein related to spheroblast formationchromosome CDS1427220 486 + 0.5
ssaC SC1415 Secretion system apparatus SsaCchromosome CDS1518145 1494 + 0.421687
ssaN SC1436 type III secretion system ATPasechromosome CDS1533379 1302 + 0.510753
ssaQ SC1439 type III secretion proteinchromosome CDS1535396 969 + 0.457172
sseB SC1419 Secretion system effector SseBchromosome CDS1521622 591 + 0.434856
stbA SC0383 putative fimbriae; major subunitchromosome CDS428942 537 - 0.47486
stbB SC0382 putative fimbriae; chaparonechromosome CDS428119 762 - 0.454068
stbC SC0381 putative fimbriae; usherchromosome CDS425574 2562 - 0.540593
stcB SC2166 putative periplasmic chaperone proteinchromosome CDS2268875 753 - 0.403718
stcC SC2165 paral putative outer membrane proteinchromosome CDS2266372 2490 - 0.457831
stdA SC2969 putative fimbrial-like proteinchromosome CDS3149971 711 - 0.488045
stdB SC2968 putative outer membrane usher proteinchromosome CDS3147362 2490 - 0.608032
stdC SC2967 putative fimbrial chaparone proteinchromosome CDS3146578 744 - 0.584677
steB SC2890 outer membrane usher proteinchromosome CDS3056123 2700 + 0.553704
stfA SC0195 putative fimbrial subunitchromosome CDS226764 561 + 0.515152
stfC SC0196 putative fimbrial outer membrane usherchromosome CDS227410 2658 + 0.55079
stfD SC0197 putative periplasmic fimbrial chaperonechromosome CDS230085 753 + 0.543161
stfD SC2891 putative periplasmic fimbrial chaperonechromosome CDS3058835 774 + 0.549096
sthA SC4439 putative fimbrial chaparone proteinchromosome CDS4750363 684 - 0.457602
sthB SC4438 putative fimbrial usher proteinchromosome CDS4747780 2538 - 0.469661
sthD SC4437 putative fimbrial subunitchromosome CDS4747205 558 - 0.501792
sthE SC4436 putative major fimbrial subunitchromosome CDS4746079 1086 - 0.519337
stiA SC0177 putative fimbrial subunitchromosome CDS204490 540 - 0.524074
stiB SC0176 putative fimbrial chaparonechromosome CDS203759 684 - 0.533626
stiC SC0175 putativie fimbrial usherchromosome CDS201189 2544 - 0.553852
tcp SC3506 methyl-accepting transmembrane citrate/phenol chemoreceptorchromosome CDS3698956 1644 + 0.556569
trg SC1621 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptorchromosome CDS1729036 1626 - 0.539975
tsr SC4385 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4692472 1662 + 0.552347
virG SC0308 similar to Shigella VirG proteinchromosome CDS354962 408 - 0.470588
vmtV SC1226 Gifsy-1 prophage VmtVchromosome CDS1335545 744 + 0.560484
vmtV SC0991 Gifsy-2 prophage VmtVchromosome CDS1104335 1530 + 0.533333
yfcP SC2894 fimbrial subunitchromosome CDS3060616 537 + 0.52514
yggR SC3039 putative protein transportchromosome CDS3219437 981 - 0.571865
yifL SC3845 putative outer membrane lipoproteinchromosome CDS4086260 204 + 0.534314
yrfC SC3423 putative inner membrane proteinchromosome CDS3598704 540 - 0.588889
 
Salmonella enterica subsp. enterica serovar Newport str. SL254, SL254
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SNSL254_pSN254_0013 signal peptide peptidase SppA domain proteinpSN254 CDS8485 978 + 0.541922
NA SNSL254_pSN254_0097 type IV conjugative transfer system signal peptidasepSN254 CDS84296 531 + 0.512241
traC SNSL254_pSN254_0095 type IV conjugative transfer system protein TraCpSN254 CDS81520 2448 + 0.522876
 
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA2482 hypothetical proteinchromosome CDS2585994 1305 - 0.594636
NA SPA3006 hypothetical proteinchromosome CDS3109444 1056 - 0.429924
NA SPA3020 hypothetical proteinchromosome CDS3123146 1644 - 0.572993
NA SPA2581 putative capsid proteinchromosome CDS2680460 834 - 0.586331
NA SPA2448 probable secreted proteinchromosome CDS2545075 408 + 0.470588
NA SPA0549 putative receptor/regulator proteinchromosome CDS623644 1005 - 0.517413
NA SPA2573 putative regulatory proteinchromosome CDS2676448 426 - 0.619718
NA SPA0083 probable secreted proteinchromosome CDS94519 291 - 0.463918
NA SPA1455 putative pathogenicity island effector effector proteinchromosome CDS1527774 591 - 0.431472
bcfA SPA0021 fimbrial subunitchromosome CDS24462 543 + 0.521179
bcfB SPA0022 fimbrial chaperonechromosome CDS25105 687 + 0.510917
bcfC SPA0023 fimbrial usherchromosome CDS25796 2622 + 0.541571
bcfD SPA0024 fimbrial subunitchromosome CDS28418 1008 + 0.503968
bcfE SPA0025 fimbrial subunitchromosome CDS29426 546 + 0.47619
bcfG SPA0027 fimbrial chaperonechromosome CDS30498 705 + 0.541844
cheA SPA0947 chemotaxis protein CheAchromosome CDS1018172 2016 + 0.551587
cheB SPA0951 chemotaxis-specific methylesterasechromosome CDS1023336 1050 + 0.55619
cheM SPA3084 methyl-accepting chemotaxis protein IIchromosome CDS3191260 1566 - 0.502554
cheR SPA0950 chemotaxis protein methyltransferasechromosome CDS1022473 867 + 0.527105
cheW SPA0948 purine binding chemotaxis proteinchromosome CDS1020208 504 + 0.531746
cheZ SPA0953 chemotaxis protein CheZchromosome CDS1024803 645 + 0.570543
cpxP SPA3903 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS4048631 501 + 0.506986
csgA SPA1707 major curlin subunit precursorchromosome CDS1766791 456 - 0.510965
fimA SPA2182 type-1 fimbrial protein, a chain precursorchromosome CDS2269893 558 - 0.544803
fimC SPA2180 fimbrial chaperone proteinchromosome CDS2268549 693 - 0.503608
fimD SPA2179 outer membrane usher protein FimD precursorchromosome CDS2265906 2613 - 0.553387
fimF SPA2177 fimbria-like protein FimF precursorchromosome CDS2264356 519 - 0.55106
fimH SPA2178 FimH protein precursorchromosome CDS2264884 1008 - 0.519841
fimI SPA2181 hypothetical proteinchromosome CDS2269285 534 - 0.546816
flgA SPA1678 flagellar basal body P-ring biosynthesis proteinchromosome CDS1740785 660 + 0.578788
flgB SPA1677 flagellar basal body rod proteinchromosome CDS1740212 417 - 0.52518
flgC SPA1676 flagellar basal body rod proteinchromosome CDS1739804 405 - 0.555556
flgD SPA1675 flagellar basal body rod modification proteinchromosome CDS1739094 699 - 0.546495
flgE SPA1674 flagellar hook proteinchromosome CDS1737856 1212 - 0.55363
flgF SPA1673 putative flagellar basal-body rod protein FlgF (proximal rod protein)chromosome CDS1737080 756 - 0.608466
flgG SPA1672 flagellar basal-body rod protein FlgG (distal rod protein)chromosome CDS1736284 783 - 0.56705
flgH SPA1671 flagellar L-ring protein precursorchromosome CDS1735531 699 - 0.543634
flgI SPA1670 flagellar P-ring protein precursorchromosome CDS1734422 1098 - 0.578324
flgJ SPA1669 flagellar biosynthesis proteinchromosome CDS1733472 951 - 0.564669
flgK SPA1668 flagellar hook-associated proteinchromosome CDS1731746 1662 - 0.516245
flgL SPA1667 flagellar hook-associated proteinchromosome CDS1730778 954 - 0.536688
flgM SPA1679 negative regulator of flagellin synthesis (anti-sigma factor)chromosome CDS1741536 294 + 0.517007
flgN SPA1680 flagella synthesis protein FlgNchromosome CDS1741834 423 + 0.541371
flhA SPA0955 flagellar biosynthesis proteinchromosome CDS1026785 2079 + 0.563252
flhB SPA0954 flagellar biosynthesis proteinchromosome CDS1025641 1152 + 0.557292
fliC SPA0911 flagellar biosynthesis proteinchromosome CDS989787 1488 + 0.498656
fliD SPA0910 flagellar hook-associated proteinchromosome CDS988127 1404 - 0.495726
fliE SPA0902 flagellar basal body proteinchromosome CDS982632 315 + 0.568254
fliF SPA0901 flagellar M-ring proteinchromosome CDS980724 1692 - 0.571513
fliG SPA0900 flagellar motor proteinchromosome CDS979736 996 - 0.549197
fliH SPA0899 flagellar assembly proteinchromosome CDS979036 708 - 0.608757
fliI SPA0898 flagellum-specific ATP synthasechromosome CDS977666 1371 - 0.600292
fliJ SPA0897 flagellar proteinchromosome CDS977201 444 - 0.513514
fliK SPA0896 flagellar hook-length control proteinchromosome CDS975981 1224 - 0.611928
fliL SPA0895 flagellar biosynthesis proteinchromosome CDS975409 468 - 0.547009
fliM SPA0894 flagellar motor switch proteinchromosome CDS974400 1005 - 0.534328
fliN SPA0893 flagellar motor switch proteinchromosome CDS973990 414 - 0.543478
fliO SPA0892 flagellar protein FliOchromosome CDS973613 378 - 0.608466
fliP SPA0891 flagellar biosynthesis proteinchromosome CDS972876 738 - 0.53794
fliQ SPA0890 flagellar biosynthesis proteinchromosome CDS972597 270 - 0.518519
fliR SPA0889 flagellar biosynthesis proteinchromosome CDS971794 795 - 0.513208
fliS SPA0909 flagellar protein FliSchromosome CDS987705 408 - 0.5
fljB SPA2627 flagellar biosynthesis proteinchromosome CDS2729053 1521 - 0.504931
hofB SPA0147 protein transport protein HofBchromosome CDS169549 1386 - 0.55267
hofC SPA0146 protein transport protein HofCchromosome CDS168357 1203 - 0.54281
hopD SPA3308 Type III leader peptidasechromosome CDS3403297 468 + 0.525641
invG SPA2756 secretory protein (associated with virulence)chromosome CDS2856133 1689 - 0.462996
motA SPA0945 flagellar motor proteinchromosome CDS1016354 888 + 0.511261
motB SPA0946 flagellar motor proteinchromosome CDS1017238 930 + 0.544086
orgB SPA2727 oxygen-regulated invasion proteinchromosome CDS2828343 672 - 0.446429
pilT SPA2962 Type II secretion, ATP-binding, proteinchromosome CDS3069305 981 - 0.579001
ppdA SPA2865 prepilin peptidase dependent protein A precursorchromosome CDS2974994 471 - 0.55414
ppdD SPA0148 prepilin peptidase dependent protein D precursorchromosome CDS170944 438 - 0.541096
safB SPA2463 periplasmic fimbrial chaperone proteinchromosome CDS2562231 741 - 0.476383
safC SPA2462 outer-membrane fimbrial usher proteinchromosome CDS2559697 2511 - 0.544006
sefB SPA4305 fimbrial chaperone proteinchromosome CDS4473323 753 + 0.288181
sefC SPA4306 outer membrane fimbrial usher proteinchromosome CDS4474080 2445 + 0.353783
sipB SPA2743 pathogenicity island 1 effector proteinchromosome CDS2843650 1782 - 0.523569
spaI SPA2752 type III secretion system ATPasechromosome CDS2851213 1296 - 0.543981
spaO SPA2749 type III secretion proteinchromosome CDS2848871 912 - 0.526316
spaS SPA2745 type III secretion proteinchromosome CDS2846069 1071 - 0.430439
spiA SPA1459 putative outer membrane secretory proteinchromosome CDS1530402 1494 - 0.423025
spy SPA1536 hypothetical proteinchromosome CDS1609798 486 - 0.5
ssaN SPA1438 type III secretion system ATPasechromosome CDS1515306 1302 - 0.512289
ssaQ SPA1435 type III secretion proteinchromosome CDS1513622 969 - 0.459236
stbA SPA2379 probable fimbrial proteinchromosome CDS2479819 537 + 0.476723
stbB SPA2380 fimbrial chaperone proteinchromosome CDS2480417 762 + 0.450131
stbC SPA2381 outer membrane fimbrial usher proteinchromosome CDS2481162 2562 + 0.539422
stbE SPA2383 fimbrial chaperone proteinchromosome CDS2485019 759 + 0.472991
stcA SPA0700 putative fimbrial subunit proteinchromosome CDS783645 534 + 0.395131
stcB SPA0701 putative fimbrial chaperone proteinchromosome CDS784240 681 + 0.396476
stcC SPA0702 putative outer membrane usher proteinchromosome CDS784949 2487 + 0.468034
stdA SPA2897 probable fimbrial proteinchromosome CDS3008709 585 - 0.526496
stdB SPA2896 probable outer membrane fimbrial usher proteinchromosome CDS3006100 2490 - 0.609237
stdC SPA2895 probable fimbrial chaperone proteinchromosome CDS3005316 744 - 0.587366
steB SPA2813 outer membrane usher proteinchromosome CDS2913144 2646 + 0.558201
steC SPA2814 periplasmic fimbrial chaperonechromosome CDS2915802 774 + 0.54522
steF SPA2817 fimbrial subunitchromosome CDS2917583 537 + 0.480447
stfA SPA0201 putative fimbrial subunitchromosome CDS234923 561 + 0.518717
stfD SPA0203 putative periplasmic fimbrial chaperonechromosome CDS238244 753 + 0.535193
sthA SPA4405 putative fimbrial proteinchromosome CDS4580651 546 - 0.501832
sthB SPA4404 putative fimbrial chaperone proteinchromosome CDS4579897 684 - 0.459064
sthC SPA4403 putative fimbrial usher proteinchromosome CDS4577314 2538 - 0.471237
sthD SPA4402 putative fimbrial subunitchromosome CDS4576739 558 - 0.5
sthE SPA4401 putative major fimbrial subunitchromosome CDS4575613 1086 - 0.518416
stkA SPA0185 major fimbrial subunitchromosome CDS214375 606 - 0.463696
stkB SPA0184 putative fimbriae; chaparonechromosome CDS213536 753 - 0.463479
stkC SPA0183 outer membrane usher proteinchromosome CDS210871 2598 - 0.515396
stkG SPA0179 putative fimbrial proteinchromosome CDS207989 1062 - 0.503766
tcfC SPA2453 outermembrane fimbrial usher proteinchromosome CDS2549942 2688 - 0.53683
tcp SPA3428 methyl-accepting chemotaxis citrate transducerchromosome CDS3535668 1644 + 0.555353
tsr SPA4354 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4530442 1662 + 0.546931
yifL SPA3787 putative lipoproteinchromosome CDS3930237 204 + 0.534314
yrfC SPA3356 hypothetical proteinchromosome CDS3450925 540 - 0.587037
 
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t1374 hypothetical proteinchromosome CDS1430275 546 - 0.587912
NA t2543 probable secreted proteinchromosome CDS2620356 408 + 0.465686
NA t1908 putative damage-inducible proteinchromosome CDS1959280 240 - 0.454167
NA t2581 hypothetical proteinchromosome CDS2661067 1302 - 0.593702
NA t4274 hypothetical proteinchromosome CDS4439479 1431 + 0.518519
NA t4320 putative capsid proteinchromosome CDS4475817 834 - 0.586331
NA t1187 hypothetical proteinchromosome CDS1256434 486 + 0.493827
NA t1561 putative chemo-receptor proteinchromosome CDS1621946 1155 - 0.490909
NA t4312 putative regulatory proteinchromosome CDS4471805 426 - 0.619718
NA t0083 probable secreted proteinchromosome CDS94577 291 - 0.474227
NA t3945 methyl-accepting chemotaxis citrate transducerchromosome CDS4084162 1644 - 0.555353
NA t0549 putative receptor/regulator proteinchromosome CDS625474 1005 - 0.514428
NA t3059 hypothetical proteinchromosome CDS3142008 1056 - 0.427083
bcfA t0022 fimbrial subunitchromosome CDS24473 543 + 0.521179
bcfB t0023 fimbrial chaperonechromosome CDS25116 687 + 0.512373
bcfD t0025 fimbrial subunitchromosome CDS28429 1008 + 0.503968
bcfE t0026 fimbrial subunitchromosome CDS29437 546 + 0.47619
bcfF t0027 fimbrial subunitchromosome CDS29998 519 + 0.558767
bcfG t0028 fimbrial chaperonechromosome CDS30509 705 + 0.541844
cheA t0956 chemotaxis protein CheAchromosome CDS1042321 2016 + 0.549603
cheB t0960 chemotaxis-specific methylesterasechromosome CDS1047782 1050 + 0.557143
cheM t3136 methyl-accepting chemotaxis protein IIchromosome CDS3223797 1569 - 0.500956
cheR t0959 chemotaxis protein methyltransferasechromosome CDS1046919 867 + 0.524798
cheW t0957 purine binding chemotaxis proteinchromosome CDS1044357 504 + 0.529762
cheZ t0962 chemotaxis protein CheZchromosome CDS1049249 645 + 0.578295
cpxP t3559 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3659998 501 - 0.506986
csgA t1776 major curlin subunit precursorchromosome CDS1838822 456 - 0.515351
fimA t2320 Type-1 fimbrial protein, a chain precursorchromosome CDS2384470 555 - 0.54955
fimC t2318 fimbrial chaperone proteinchromosome CDS2383126 693 - 0.494949
fimD t2317 outer membrane usher protein FimD precursorchromosome CDS2380483 2613 - 0.558362
fimF t2315 fimbria-like protein FimF precursorchromosome CDS2378933 519 - 0.543353
fimI t2319 hypothetical proteinchromosome CDS2383862 534 - 0.544944
flgA t1747 flagellar basal body P-ring biosynthesis proteinchromosome CDS1812818 660 + 0.580303
flgB t1746 flagellar basal body rod proteinchromosome CDS1812245 417 - 0.529976
flgC t1745 flagellar basal body rod proteinchromosome CDS1811837 405 - 0.548148
flgD t1744 flagellar basal body rod modification proteinchromosome CDS1811127 699 - 0.546495
flgE t1743 flagellar hook proteinchromosome CDS1809889 1212 - 0.55033
flgF t1742 putative flagellar basal-body rod protein FlgFchromosome CDS1809113 756 - 0.609788
flgG t1741 flagellar basal-body rod protein FlgGchromosome CDS1808317 783 - 0.56705
flgH t1740 flagellar L-ring protein precursorchromosome CDS1807564 699 - 0.542203
flgI t1739 flagellar P-ring protein precursorchromosome CDS1806455 1104 - 0.578804
flgJ t1738 flagellar biosynthesis proteinchromosome CDS1805505 951 - 0.564669
flgK t1737 flagellar hook-associated proteinchromosome CDS1803779 1662 - 0.516847
flgL t1736 flagellar hook-associated proteinchromosome CDS1802811 954 - 0.536688
flgM t1748 negative regulator of flagellin synthesischromosome CDS1813569 294 + 0.510204
flgN t1749 flagella synthesis protein FlgNchromosome CDS1813867 423 + 0.541371
flhA t0964 flagellar biosynthesis proteinchromosome CDS1051231 2079 + 0.560847
flhB t0963 flagellar biosynthesis proteinchromosome CDS1050087 1152 + 0.559028
fliC t0918 flagellar biosynthesis proteinchromosome CDS1013788 1521 + 0.476003
fliD t0917 flagellar hook-associated proteinchromosome CDS1012128 1404 - 0.495014
fliE t0909 flagellar basal body proteinchromosome CDS1006560 315 + 0.546032
fliF t0908 flagellar M-ring proteinchromosome CDS1004661 1683 - 0.568627
fliG t0907 flagellar motor proteinchromosome CDS1003673 996 - 0.553213
fliH t0906 flagellar assembly proteinchromosome CDS1002973 708 - 0.607345
fliI t0905 flagellum-specific ATP synthasechromosome CDS1001603 1371 - 0.598833
fliJ t0904 flagellar proteinchromosome CDS1001138 444 - 0.513514
fliK t0903 flagellar hook-length control proteinchromosome CDS999912 1230 - 0.60813
fliL t0902 flagellar biosynthesis proteinchromosome CDS999340 468 - 0.540598
fliM t0901 flagellar motor switch proteinchromosome CDS998331 1005 - 0.533333
fliN t0900 flagellar motor switch proteinchromosome CDS997921 414 - 0.545894
fliO t0899 flagellar protein FliOchromosome CDS997544 378 - 0.608466
fliP t0898 flagellar biosynthesis proteinchromosome CDS996807 738 - 0.536585
fliQ t0897 flagellar biosynthesis proteinchromosome CDS996528 270 - 0.514815
fliR t0896 flagellar biosynthesis proteinchromosome CDS995725 795 - 0.509434
fliS t0916 flagellar protein FliSchromosome CDS1011706 408 - 0.497549
hofB t0149 transport protein HofBchromosome CDS169457 1386 - 0.553391
hofC t0148 transport protein HofCchromosome CDS168265 1203 - 0.541978
hopD t4063 Type III leader peptidasechromosome CDS4216773 468 - 0.523504
invG t2800 virulence-associated secretory proteinchromosome CDS2879454 1689 - 0.463588
motA t0954 flagellar motor proteinchromosome CDS1040503 888 + 0.513514
motB t0955 flagellar motor proteinchromosome CDS1041387 930 + 0.543011
orgA t2771 oxygen-regulated invasion proteinchromosome CDS2851668 672 - 0.449405
pilQ t4245 nucleotide-binding proteinchromosome CDS4413760 1716 + 0.545455
pilR t4246 hypothetical proteinchromosome CDS4415472 1086 + 0.563536
pilT t3011 Type II secretion, ATP-binding, proteinchromosome CDS3101125 981 - 0.574924
pilU t4249 prepilin peptidasechromosome CDS4417675 663 + 0.536953
ppdA t2908 prepilin peptidase dependent protein A precursorchromosome CDS2998794 471 - 0.56051
ppdD t0150 prepilin peptidase dependent protein D precursorchromosome CDS170852 438 - 0.534247
safB t2559 periplasmic fimbrial chaperone proteinchromosome CDS2637504 741 - 0.479082
safC t2558 outer-membrane fimbrial usher proteinchromosome CDS2634970 2511 - 0.543608
sefB t4534 fimbrial chaperone proteinchromosome CDS4680464 753 + 0.288181
sefC t4536 outer membrane fimbrial usher proteinchromosome CDS4681221 2553 + 0.359185
sipB t2787 pathogenicity island 1 effector proteinchromosome CDS2866971 1782 - 0.523008
spaI t2796 type III secretion system ATPasechromosome CDS2874534 1296 - 0.54321
spaO t2793 type III secretion proteinchromosome CDS2872192 912 - 0.526316
spaS t2789 type III secretion proteinchromosome CDS2869390 1071 - 0.431373
spiA t1262 putative outer membrane secretory proteinchromosome CDS1334869 1494 + 0.423025
ssaN t1283 type III secretion system ATPasechromosome CDS1350097 1302 + 0.511521
ssaQ t1286 type III secretion proteinchromosome CDS1352114 969 + 0.45614
sseB t1266 putative pathogenicity island effector proteinchromosome CDS1338340 591 + 0.431472
staB t0189 chaperone protein EcpD precursorchromosome CDS215905 735 - 0.468027
staC t0188 outer membrane usher protein HtrE precursorchromosome CDS213239 2592 - 0.513117
stbA t2521 probable fimbrial proteinchromosome CDS2596311 537 + 0.478585
stbB t2522 fimbrial chaperone proteinchromosome CDS2596909 762 + 0.448819
stbE t2525 fimbrial chaperone proteinchromosome CDS2601511 759 + 0.469038
stcB t0705 putative fimbrial chaperone proteinchromosome CDS791314 684 + 0.397661
stdA t2940 probable fimbrial proteinchromosome CDS3033973 582 - 0.524055
stdB t2939 probable outer membrane fimbrial usher proteinchromosome CDS3031364 2490 - 0.610442
stdC t2938 probable fimbrial chaperone proteinchromosome CDS3030580 744 - 0.583333
steB t2857 outer membrane usher proteinchromosome CDS2935533 2700 + 0.553333
steC t2858 periplasmic fimbrial chaperonechromosome CDS2938245 774 + 0.546512
steF t2861 fimbrial subunitchromosome CDS2940026 537 + 0.482309
stgA t3659 probable fimbrial subunit proteinchromosome CDS3766087 576 + 0.508681
stgB t3660 fimbrial chaperone proteinchromosome CDS3766760 699 + 0.410587
sthA t4634 putative fimbrial proteinchromosome CDS4787384 546 - 0.505495
sthB t4633 putative fimbrial chaperone proteinchromosome CDS4786630 684 - 0.459064
sthD t4631 putative fimbrial subunitchromosome CDS4783473 558 - 0.496416
tar t0958 methyl-accepting chemotaxis protein IIchromosome CDS1045097 1662 + 0.556558
yifL t3351 putative lipoproteinchromosome CDS3452926 204 - 0.534314
yrfC t4016 hypothetical proteinchromosome CDS4169489 540 + 0.585185
 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HCM2.0066c hypothetical proteinpHCM2 CDS55976 924 - 0.549784
NA STY4234 methyl-accepting chemotaxis citrate transducerchromosome CDS4099515 1644 - 0.555353
NA STY2043 putative bacteriophage proteinchromosome CDS1912209 393 - 0.475827
NA STY4626 putative capsid proteinchromosome CDS4492225 834 - 0.586331
NA STY2545 putative receptor/regulator proteinchromosome CDS2378234 1005 + 0.514428
NA HCM2.0060c hypothetical proteinpHCM2 CDS52553 747 - 0.546185
NA STY0095 probable secreted proteinchromosome CDS94586 291 - 0.474227
NA STY4618 putative regulatory proteinchromosome CDS4488213 426 - 0.619718
NA STY1032 putative damage-inducible proteinchromosome CDS1021558 240 + 0.454167
NA STY3309 hypothetical proteinchromosome CDS3156513 1056 - 0.427083
NA STY1805 hypothetical proteinchromosome CDS1724211 486 - 0.493827
NA STY0305 hypothetical proteinchromosome CDS317713 1302 + 0.593702
NA STY0352 probable secreted proteinchromosome CDS360350 408 - 0.465686
NA STY1614 hypothetical proteinchromosome CDS1549845 546 + 0.587912
NA STY4577 hypothetical proteinchromosome CDS4454829 1431 + 0.518519
NA STY1408 putative chemo-receptor proteinchromosome CDS1358082 1155 + 0.490909
bcfA STY0024 fimbrial subunitchromosome CDS24473 543 + 0.521179
bcfB STY0025 fimbrial chaperonechromosome CDS25116 687 + 0.512373
bcfD STY0029 fimbrial subunitchromosome CDS28429 1008 + 0.502976
bcfE STY0030 fimbrial subunitchromosome CDS29437 546 + 0.47619
bcfF STY0031 fimbrial subunitchromosome CDS29998 519 + 0.558767
bcfG STY0032 fimbrial chaperonechromosome CDS30509 705 + 0.541844
cheA STY2130 chemotaxis protein CheAchromosome CDS1982145 2016 - 0.549603
cheB STY2126 chemotaxis-specific methylesterasechromosome CDS1977650 1050 - 0.55619
cheM STY3394 methyl-accepting chemotaxis protein IIchromosome CDS3238302 1569 - 0.500319
cheR STY2127 chemotaxis protein methyltransferasechromosome CDS1978696 867 - 0.524798
cheW STY2129 purine binding chemotaxis proteinchromosome CDS1981621 504 - 0.529762
cheZ STY2124 chemotaxis protein CheZchromosome CDS1976588 645 - 0.578295
cpxP STY3811 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3674335 501 - 0.506986
csgA STY1181 major curlin subunit precursorchromosome CDS1141906 456 + 0.515351
fimA STY0589 type-1 fimbrial protein, a chain precursorchromosome CDS596077 555 + 0.54955
fimC STY0592 fimbrial chaperone proteinchromosome CDS597283 693 + 0.494949
fimD STY0593 outer membrane usher protein FimD precursorchromosome CDS598006 2613 + 0.558362
fimF STY0595 fimbria-like protein FimF precursorchromosome CDS601650 519 + 0.543353
flgA STY1212 flagellar basal body P-ring biosynthesis proteinchromosome CDS1167706 660 - 0.580303
flgB STY1213 flagellar basal body rod proteinchromosome CDS1168522 417 + 0.529976
flgC STY1214 flagellar basal body rod proteinchromosome CDS1168942 405 + 0.548148
flgD STY1215 flagellar basal body rod modification proteinchromosome CDS1169358 699 + 0.546495
flgE STY1216 flagellar hook proteinchromosome CDS1170083 1212 + 0.55033
flgF STY1217 putative flagellar basal-body rod protein FlgF (proximal rod protein)chromosome CDS1171315 756 + 0.609788
flgG STY1218 flagellar basal-body rod protein FlgG (distal rod protein)chromosome CDS1172084 783 + 0.56705
flgH STY1219 flagellar L-ring protein precursorchromosome CDS1172921 699 + 0.542203
flgI STY1220 flagellar P-ring protein precursorchromosome CDS1173625 1104 + 0.578804
flgJ STY1221 flagellar biosynthesis proteinchromosome CDS1174728 951 + 0.564669
flgK STY1222 flagellar hook-associated proteinchromosome CDS1175743 1662 + 0.516847
flgL STY1223 flagellar hook-associated proteinchromosome CDS1177419 954 + 0.536688
flgM STY1211 negative regulator of flagellin synthesis (anti-sigma factor)chromosome CDS1167321 294 - 0.510204
flgN STY1210 flagella synthesis protein FlgNchromosome CDS1166894 423 - 0.541371
flhA STY2122 flagellar biosynthesis proteinchromosome CDS1973172 2079 - 0.560847
flhB STY2123 flagellar biosynthesis proteinchromosome CDS1975243 1152 - 0.559028
fliC STY2167 flagellar biosynthesis proteinchromosome CDS2011173 1521 - 0.476003
fliD STY2168 flagellar hook-associated proteinchromosome CDS2012950 1404 + 0.494302
fliE STY2176 flagellar basal body proteinchromosome CDS2019614 315 - 0.546032
fliF STY2177 flagellar M-ring proteinchromosome CDS2020145 1683 + 0.568033
fliG STY2178 flagellar motor proteinchromosome CDS2021820 996 + 0.553213
fliH STY2179 flagellar assembly proteinchromosome CDS2022808 708 + 0.607345
fliI STY2180 flagellum-specific ATP synthasechromosome CDS2023515 1371 + 0.598833
fliJ STY2181 flagellar proteinchromosome CDS2024907 444 + 0.513514
fliK STY2182 flagellar hook-length control proteinchromosome CDS2025347 1230 + 0.60813
fliL STY2183 flagellar biosynthesis proteinchromosome CDS2026681 468 + 0.540598
fliM STY2184 flagellar motor switch proteinchromosome CDS2027153 1005 + 0.533333
fliN STY2185 flagellar motor switch proteinchromosome CDS2028154 414 + 0.545894
fliO STY2186 flagellar protein FliOchromosome CDS2028567 378 + 0.608466
fliP STY2187 flagellar biosynthesis proteinchromosome CDS2028944 738 + 0.536585
fliQ STY2188 flagellar biosynthesis proteinchromosome CDS2029691 270 + 0.514815
fliR STY2189 flagellar biosynthesis proteinchromosome CDS2029969 795 + 0.509434
fliS STY2169 flagellar protein FliSchromosome CDS2014368 408 + 0.497549
hofB STY0165 protein transport protein HofBchromosome CDS169466 1386 - 0.553391
hofC STY0164 protein transport protein HofCchromosome CDS168274 1203 - 0.541978
hopD STY4356 Type III leader peptidasechromosome CDS4232125 468 - 0.523504
invG STY3021 secretory protein (associated with virulence)chromosome CDS2893597 1689 - 0.463588
motA STY2132 flagellar motor proteinchromosome CDS1985091 888 - 0.513514
motB STY2131 flagellar motor proteinchromosome CDS1984165 930 - 0.543011
orgAb STY2990 cell invasion proteinchromosome CDS2865811 672 - 0.449405
pilQ STY4545 nucleotide-binding proteinchromosome CDS4429110 1716 + 0.545455
pilR STY4546 hypothetical proteinchromosome CDS4430822 1086 + 0.563536
pilT STY3252 Type II secretion, ATP-binding, proteinchromosome CDS3115630 981 - 0.574924
pilU STY4549 prepilin peptidasechromosome CDS4433025 663 + 0.536953
ppdA STY3138 prepilin peptidase dependent protein A precursorchromosome CDS3012899 471 - 0.56051
ppdD STY0166 prepilin peptidase dependent protein D precursorchromosome CDS170861 438 - 0.534247
safB STY0335 periplasmic fimbrial chaperone proteinchromosome CDS342869 741 + 0.479082
safC STY0336 outer-membrane fimbrial usher proteinchromosome CDS343633 2511 + 0.543608
sefB STY4837 fimbrial chaperone proteinchromosome CDS4697576 753 + 0.288181
sefC STY4838 outer membrane fimbrial usher proteinchromosome CDS4698333 2517 + 0.357171
sipB STY3008 pathogenicity island 1 effector proteinchromosome CDS2881114 1782 - 0.523008
spaI STY3017 type III secretion system ATPasechromosome CDS2888677 1296 - 0.54321
spaO STY3014 type III secretion proteinchromosome CDS2886335 912 - 0.526316
spaS STY3010 type III secretion proteinchromosome CDS2883533 1071 - 0.431373
spiA STY1726 putative outer membrane secretory proteinchromosome CDS1644774 1494 - 0.423025
ssaN STY1705 type III secretion system ATPasechromosome CDS1629738 1302 - 0.511521
ssaQ STY1702 type III secretion proteinchromosome CDS1628054 969 - 0.455108
sseB STY1722 putative pathogenicity island effector effector proteinchromosome CDS1642206 591 - 0.431472
staB STY0206 chaperone protein EcpD precursorchromosome CDS215914 735 - 0.468027
staC STY0205 outer membrane usher protein HtrE precursorchromosome CDS213248 2592 - 0.512731
stbA STY0373 probable fimbrial proteinchromosome CDS384266 537 - 0.478585
stbB STY0372 fimbrial chaperone proteinchromosome CDS383443 762 - 0.448819
stbC STY0371 outer membrane fimbrial usher proteinchromosome CDS380898 2562 - 0.539422
stbE STY0369 fimbrial chaperone proteinchromosome CDS378844 759 - 0.469038
stcB STY2380 putative fimbrial chaperone proteinchromosome CDS2211940 684 - 0.399123
stcC STY2379 putative outer membrane usher proteinchromosome CDS2209437 2490 - 0.457831
stdA STY3177 probable fimbrial proteinchromosome CDS3048066 582 - 0.524055
stdB STY3176 probable outer membrane fimbrial usher proteinchromosome CDS3045457 2490 - 0.610442
stdC STY3175 probable fimbrial chaperone proteinchromosome CDS3044673 744 - 0.583333
steB STY3086 outer membrane usher proteinchromosome CDS2949638 2700 + 0.553704
steC STY3087 periplasmic fimbrial chaperonechromosome CDS2952350 774 + 0.546512
steF STY3090 fimbrial subunitchromosome CDS2954131 537 + 0.482309
stgA STY3918 probable fimbrial subunit proteinchromosome CDS3780596 576 + 0.508681
stgB STY3919 fimbrial chaperone proteinchromosome CDS3781269 699 + 0.410587
sthA STY4944 putative fimbrial proteinchromosome CDS4804460 546 - 0.503663
sthB STY4943 putative fimbrial chaperone proteinchromosome CDS4803706 684 - 0.459064
sthD STY4940 putative fimbrial subunitchromosome CDS4800549 558 - 0.496416
tar STY2128 methyl-accepting chemotaxis protein IIchromosome CDS1979723 1662 - 0.556558
yifL STY3613 putative lipoproteinchromosome CDS3467268 204 - 0.534314
yrfC STY4305 hypothetical proteinchromosome CDS4184842 540 + 0.583333
 
Salmonella typhimurium LT2, SGSC1412
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
pefC PSLT017 usher proteinpSLT CDS10933 2409 - 0.589871
pefD PSLT016 chaperonepSLT CDS10248 693 - 0.584416
 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_1632 putative tail component of prophagechromosome CDS1620813 741 - 0.553306
NA SBO_2372 putative fimbrial-like proteinchromosome CDS2360444 468 - 0.557692
ccmD SBO_2109 heme exporter protein Cchromosome CDS2089470 210 + 0.557143
cheB SBO_1117 protein methylesterasechromosome CDS1121368 939 + 0.528221
cheR SBO_1116 protein glutamate methyltransferasechromosome CDS1120601 765 + 0.541176
cheZ SBO_1119 CheY protein phophatasechromosome CDS1122721 645 + 0.533333
ecpD SBO_0126 probable pilin chaperonechromosome CDS140393 741 - 0.442645
fimA SBO_4364 major type 1 subunit fimbrinchromosome CDS4416896 549 + 0.513661
fimC SBO_4366 periplasmic chaperonechromosome CDS4418085 726 + 0.442149
fimF SBO_4368 fimbrial morphologychromosome CDS4421523 531 + 0.493409
fimG SBO_4369 fimbrial morphologychromosome CDS4422066 504 + 0.52381
fimI SBO_4365 fimbrial proteinchromosome CDS4417410 639 + 0.494523
flgA SBO_1992 assembly of basal-body periplasmic P ringchromosome CDS1965793 660 + 0.524242
flgB SBO_1991 cell-proximal portion of basal-body rodchromosome CDS1965308 330 - 0.527273
flgC SBO_1990 cell-proximal portion of basal-body rodchromosome CDS1964900 405 - 0.530864
flgD SBO_1989 initiation of hook assemblychromosome CDS1964193 696 - 0.543103
flgE SBO_1988 hook proteinchromosome CDS1962960 1209 - 0.513648
flgF SBO_1987 cell-proximal portion of basal-body rodchromosome CDS1962185 756 - 0.589947
flgG SBO_1986 cell-distal portion of basal-body rodchromosome CDS1961265 783 - 0.535121
flgH SBO_1985 basal-body outer-membrane L (lipopolysaccharide layer) ring proteinchromosome CDS1960514 699 - 0.532189
flgI SBO_1984 FlgIchromosome CDS1959405 1098 - 0.542805
flgK SBO_1982 hook-filament junction protein 1chromosome CDS1956755 1644 - 0.520073
flgL SBO_1981 hook-filament junction proteinchromosome CDS1955790 954 - 0.509434
flgM SBO_1993 anti-FliA factorchromosome CDS1966528 330 + 0.533333
flgN SBO_1994 protein of flagellar biosynthesischromosome CDS1966862 417 + 0.47482
flhA SBO_1121 FlhAchromosome CDS1124544 2079 + 0.546417
flhB SBO_1120 putative part of export apparatus for flagellar proteinschromosome CDS1123520 1032 + 0.54845
fliC SBO_1083 flagellinchromosome CDS1092639 1707 + 0.496192
fliD SBO_1082 FliDchromosome CDS1090967 1407 - 0.520967
fliE SBO_1071 FliEchromosome CDS1082649 315 + 0.549206
fliF SBO_1070 FliFchromosome CDS1080776 1659 - 0.547318
fliJ SBO_1065 flagellar fliJ proteinchromosome CDS1076028 444 - 0.529279
fliL SBO_1063 flagellar biosynthesischromosome CDS1074339 465 - 0.535484
fliM SBO_1062 FliMchromosome CDS1073330 1005 - 0.529353
fliN SBO_1061 FliNchromosome CDS1072920 414 - 0.548309
fliO SBO_1060 flagellar biosynthesischromosome CDS1072552 366 - 0.557377
fliQ SBO_1058 flagellar biosynthesischromosome CDS1071537 270 - 0.514815
fliR SBO_1057 flagellar biosynthesischromosome CDS1070743 786 - 0.475827
fliS SBO_1081 FliSchromosome CDS1090532 411 - 0.501217
gspE SBO_3013 putative type II secretion proteinchromosome CDS3014040 1353 + 0.592018
gspF SBO_3014 putative type II secretion proteinchromosome CDS3015532 1224 + 0.580065
gspG SBO_3015 putative type II secretion proteinchromosome CDS3016772 456 + 0.519737
gspH SBO_3016 putative type II secretion proteinchromosome CDS3017264 468 + 0.549145
gspI SBO_3017 putative type II secretion proteinchromosome CDS3017791 372 + 0.575269
hofC SBO_0094 HofCchromosome CDS102416 1203 - 0.528678
lpfA SBO_3546 putative major fimbrial subunitchromosome CDS3556159 543 - 0.489871
ppdA SBO_2718 prepilin peptidase dependent protein Achromosome CDS2728955 471 - 0.541401
spy SBO_1347 Spychromosome CDS1331191 471 + 0.505308
tsr SBO_4414 methyl-accepting chemotaxis protein Ichromosome CDS4468358 1656 + 0.547705
ycbF SBO_2287 putative chaperonechromosome CDS2275664 738 - 0.517615
yfcS SBO_2375 putative chaperonechromosome CDS2361918 753 - 0.569721
yfcU SBO_2376 PapC-like porin proteinchromosome CDS2362690 2643 - 0.51154
yggR SBO_3039 putative protein transportchromosome CDS3038416 1026 + 0.545809
ygiL SBO_2901 putative fimbrial-like proteinchromosome CDS2903381 579 + 0.447323
yiiO SBO_3931 Uncharacterized periplasmic proteinchromosome CDS3959393 504 + 0.498016
yjaI SBO_4023 hypothetical proteinchromosome CDS4059687 567 - 0.516755
ylbE SBO_0424 hypothetical proteinchromosome CDS438838 1002 - 0.573852
ymfL SBO_0254 hypothetical proteinchromosome CDS269875 570 - 0.489474
yraJ SBO_3240 putative outer membrane proteinchromosome CDS3245051 2334 - 0.476007
yrbF SBO_3187 putative ATP-binding component of a transport systemchromosome CDS3195072 810 + 0.545679
yrfC SBO_3381 hypothetical proteinchromosome CDS3363458 540 - 0.553704
 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_4570 hypothetical proteinchromosome CDS4285579 1212 - 0.509901
NA SDY_2537 putative fimbrial usherchromosome CDS2333151 1731 - 0.553437
NA SDY_0912 hypothetical proteinchromosome CDS861552 834 + 0.496403
NA SDY_0151 hypothetical proteinchromosome CDS152152 492 - 0.424797
NA SDY_2532 putative fimbrial-like proteinchromosome CDS2330258 540 - 0.5
NA SDY_2536 hypothetical proteinchromosome CDS2332573 600 - 0.565
NA SDY_0915 putative fimbrial-like proteinchromosome CDS864263 510 + 0.478431
NA SDY_2533 hypothetical proteinchromosome CDS2330794 489 - 0.494888
NA SDY_0485 putative flagellar motor transmembrane channel proteinchromosome CDS471532 744 - 0.555108
NA SDY_0916 putative fimbrial-like proteinchromosome CDS864732 564 + 0.47695
flgA SDY_2080 assembly of basal-body periplasmic P ringchromosome CDS1890612 660 + 0.527273
flgB SDY_2078 cell-proximal portion of basal-body rodchromosome CDS1889267 417 - 0.522782
flgC SDY_2077 cell-proximal portion of basal-body rodchromosome CDS1888859 405 - 0.523457
flgD SDY_2076 initiation of hook assemblychromosome CDS1888152 696 - 0.537356
flgE SDY_2075 hook proteinchromosome CDS1886919 1209 - 0.511166
flgH SDY_2072 basal-body outer-membrane L ring proteinchromosome CDS1884477 699 - 0.529328
flgI SDY_2071 FlgIchromosome CDS1883368 1098 - 0.538251
flgJ SDY_2070 FlgJchromosome CDS1882427 942 - 0.542463
flgL SDY_2068 hook-filament junction proteinchromosome CDS1879825 897 - 0.519509
flgM SDY_2081 anti-FliA factorchromosome CDS1891347 294 + 0.513605
fliD SDY_1091 filament capping proteinchromosome CDS1018116 1398 - 0.520029
fliS SDY_1090 repressor of class 3a and 3b operonschromosome CDS1017681 411 - 0.498783
gspD SDY_3093 putative type II secretion proteinchromosome CDS2869065 1836 + 0.559368
gspE SDY_3094 putative type II secretion proteinchromosome CDS2870900 1494 + 0.586345
gspF SDY_3095 putative type II secretion proteinchromosome CDS2872393 1200 + 0.589167
gspG SDY_3096 putative type II secretion proteinchromosome CDS2873633 456 + 0.517544
gspH SDY_3097 putative type II secretion proteinchromosome CDS2874125 531 + 0.551789
gspI SDY_3098 putative type II secretion proteinchromosome CDS2874652 372 + 0.569892
hofB SDY_0137 HofBchromosome CDS136297 1335 - 0.539326
ipaC SDY_P165 IpaCpSD1_197 CDS132229 1092 - 0.384615
mbhA SDY_0484 putative motility proteinchromosome CDS470606 780 - 0.530769
motA SDY_1189 proton conductor component of motorchromosome CDS1101937 888 - 0.511261
mxiD SDY_P183 MxiDpSD1_197 CDS146043 1701 + 0.336273
nfrB SDY_0266 bacteriophage N4 receptorchromosome CDS260895 1965 - 0.533842
ppdA SDY_3043 prepilin peptidase dependent protein Achromosome CDS2820335 471 - 0.541401
ppdD SDY_0138 prelipin peptidase dependent proteinchromosome CDS137641 441 - 0.52381
sfmC SDY_0256 putative chaperonechromosome CDS253042 366 + 0.434426
spa33 SDY_P190 Spa33pSD1_197 CDS153902 882 + 0.320862
spa40 SDY_P193 Spa40pSD1_197 CDS156490 1029 + 0.318756
spa47 SDY_P187 Spa47pSD1_197 CDS151320 1293 + 0.392885
spy SDY_1534 Spychromosome CDS1406110 486 + 0.506173
trg SDY_1760 methyl-accepting chemotaxis protein IIIchromosome CDS1600836 1434 - 0.51325
ybgD SDY_0655 putative fimbrial-like proteinchromosome CDS618980 567 - 0.455026
ybgP SDY_0652 putative chaperonechromosome CDS614951 696 - 0.521552
ycbF SDY_0917 putative chaperonechromosome CDS865261 738 + 0.512195
yehB SDY_2287 putative outer membrane proteinchromosome CDS2077541 1794 - 0.458751
yfcS SDY_2535 putative chaperonechromosome CDS2331801 750 - 0.52
yggR SDY_3121 putative protein transportchromosome CDS2894543 1026 + 0.549708
yifL SDY_3937 hypothetical proteinchromosome CDS3667737 204 - 0.52451
yiiO SDY_3833 Uncharacterized periplasmic proteinchromosome CDS3565926 504 - 0.501984
yjaI SDY_3724 hypothetical proteinchromosome CDS3456081 561 + 0.511586
yraK SDY_3324 putative fimbrial proteinchromosome CDS3082053 1092 + 0.477106
yrbF SDY_3376 putative ATP-binding component of a transport systemchromosome CDS3130514 810 - 0.545679
 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S4254 probable fimbrial protein remnantchromosome CDS4166615 1080 + 0.434259
NA S1008 putative fimbrial-like proteinchromosome CDS993920 543 + 0.471455
NA S1009 putative fimbrial-like proteinchromosome CDS994422 564 + 0.473404
NA S1289 putative adhesion and penetration proteinchromosome CDS1249606 2868 - 0.498954
NA S0748 putative tail component of prophage CP-933Kchromosome CDS730786 741 + 0.554656
NA S4250 possible chaperonechromosome CDS4166011 561 + 0.420677
NA S3755 hypothetical proteinchromosome CDS3651915 369 - 0.479675
cheA S2028 chemotaxis protein CheAchromosome CDS1948644 1965 - 0.531807
cheB S2023 chemotaxis-specific methylesterasechromosome CDS1942736 1050 - 0.537143
cheR S2024 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1943788 861 - 0.538908
cheW S2027 positive regulator of CheA protein activitychromosome CDS1948120 504 - 0.515873
cheZ S2021 chemotaxis protein CheZchromosome CDS1941677 645 - 0.533333
fhiA S0299 flagellar biosynthetic protein FlhAchromosome CDS298315 1740 - 0.583908
fimA S4465 major type 1 subunit fimbrin (pilin)chromosome CDS4372652 549 - 0.510018
fimC S4463 periplasmic chaperonechromosome CDS4371286 726 - 0.442149
fimF S4458 minor fimbrial subunit, precursor polypeptidechromosome CDS4367267 531 - 0.489642
fimG S4457 minor fimbrial subunit, precursor polypeptidechromosome CDS4366751 504 - 0.529762
fimI S4464 fimbrial proteinchromosome CDS4372048 639 - 0.499218
flgA S1156 flagellar basal body P-ring biosynthesis proteinchromosome CDS1120857 660 - 0.521212
flgB S1157 flagellar basal body rod proteinchromosome CDS1121671 417 + 0.539568
flgD S1159 flagellar hook formation protein FlgDchromosome CDS1122506 696 + 0.54454
flgE S1160 flagellar hook proteinchromosome CDS1123226 1209 + 0.513648
flgG S1162 flagellar basal body rod protein flgGchromosome CDS1125343 783 + 0.533844
flgH S1163 flagellar L-ring protein precursorchromosome CDS1126178 699 + 0.53505
flgI S1164 flagellar P-ring protein precursorchromosome CDS1126888 1098 + 0.533698
flgJ S1165 flagellar biosynthesis proteinchromosome CDS1127985 942 + 0.539278
flgM S1155 flagellar protein FlgMchromosome CDS1120488 294 - 0.530612
flgN S1154 flagella synthesis protein FlgNchromosome CDS1120067 417 - 0.479616
flhB S2014 flagellar biosynthesis proteinchromosome CDS1936449 1194 - 0.551089
fliC S2062 flagellar biosynthesis proteinchromosome CDS1974756 1653 - 0.482154
fliD S2063 flagellar hook-associated proteinchromosome CDS1976674 1407 + 0.522388
fliE S2076 flagellar basal body proteinchromosome CDS1989322 315 - 0.549206
fliG S2078 flagellar motor proteinchromosome CDS1991502 996 + 0.562249
fliH S2079 flagellar assembly proteinchromosome CDS1992490 687 + 0.572052
fliI S2080 flagellum-specific ATP synthasechromosome CDS1993176 1374 + 0.580058
fliJ S2081 chromosome pseudo1994568 345 + 0.498551
fliK S2082 flagellar hook-length control proteinchromosome CDS1994909 1128 + 0.544326
fliL S2083 flagellar biosynthesis proteinchromosome CDS1996141 465 + 0.529032
fliM S2084 flagellar motor switch proteinchromosome CDS1996610 1005 + 0.530348
fliN S2085 flagellar motor switch proteinchromosome CDS1997611 414 + 0.557971
fliO S2086 flagellar protein FliOchromosome CDS1998087 306 + 0.562092
fliQ S2088 flagellar biosynthesis proteinchromosome CDS1999167 270 + 0.511111
fliR S2089 flagellar biosynthesis proteinchromosome CDS1999445 786 + 0.47201
fliS S2064 flagellar protein FliSchromosome CDS1978105 411 + 0.481752
hofC S0105 putative integral membrane proteinchromosome CDS112511 1203 - 0.525353
hopD S4408 chromosome pseudo4334385 288 - 0.465278
lpfA S3961 putative major fimbrial subunitchromosome CDS3855926 573 + 0.474695
lpfC S4048 putative long polar fimbriaechromosome CDS3940913 2523 - 0.470075
mbhA S0298 flagellar motor proteinchromosome CDS299999 786 + 0.522901
motA S2030 flagellar motor proteinchromosome CDS1951536 888 - 0.516892
motB S2029 flagellar motor proteinchromosome CDS1950613 927 - 0.530744
ppdD S0107 prelipin peptidase dependent proteinchromosome CDS114860 441 - 0.530612
sfmA S0469 putative fimbrial-like proteinchromosome CDS476502 576 + 0.4375
sfmC S0470 putative chaperonechromosome CDS477297 693 + 0.431457
spy S1600 periplasmic proteinchromosome CDS1558202 486 + 0.50823
tap S2025 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS1944667 1602 - 0.538702
tar S2026 methyl-accepting chemotaxis protein II, aspartate sensor receptorchromosome CDS1946314 1662 - 0.527076
trg S1485 methyl-accepting chemotaxis protein III, ribose sensor receptorchromosome CDS1446880 1641 + 0.508836
tsr S4656 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4550098 1665 + 0.53994
ybgD S0591 putative fimbrial-like proteinchromosome CDS600357 567 + 0.47619
ybgP S0593 putative chaperonechromosome CDS603448 732 + 0.494536
ybgQ S0592 putative outer membrane proteinchromosome CDS600974 2460 + 0.493902
ycbF S1010 putative chaperonechromosome CDS994951 738 + 0.509485
ycbS S1006 putative outer membrane proteinchromosome CDS990248 2601 + 0.478278
yehB S2296 putative outer membrane proteinchromosome CDS2175483 2481 - 0.455462
yehD S2298 putative fimbrial-like proteinchromosome CDS2178734 525 - 0.405714
yggR S3146 putative transport proteinchromosome CDS3024584 1026 - 0.540936
yifL S3870 putative outer membrane lipoproteinchromosome CDS3766880 204 - 0.52451
yjaI S3661 hypothetical proteinchromosome CDS3552409 567 + 0.516755
yraI S3397 putative chaperonechromosome CDS3270079 696 + 0.448276
yraK S3403 putative fimbrial proteinchromosome CDS3274664 1092 + 0.478938
yrfC S4350 hypothetical proteinchromosome CDS4281516 540 + 0.553704
 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF1205 putative adhesion and penetration proteinchromosome CDS1249891 2868 - 0.498954
NA SF0943 putative fimbrial-like proteinchromosome CDS989956 543 + 0.471455
NA SF0944 putative fimbrial-like proteinchromosome CDS990458 564 + 0.473404
NA SF1892 putative tail component of prophage CP-933Kchromosome CDS1932220 741 - 0.556005
NA SF0710 putative tail component of prophage CP-933Kchromosome CDS734622 747 + 0.555556
NA SF2409 similar to fimbrial proteinchromosome CDS2458261 525 - 0.455238
NA SF0463 hypothetical proteinchromosome CDS478218 501 + 0.431138
NA SF3992 hypothetical proteinchromosome CDS4120936 369 + 0.479675
NA SF3511 hypothetical proteinchromosome CDS3603586 1149 - 0.442994
NA SF2413 hypothetical proteinchromosome CDS2460544 786 - 0.529262
cheA SF1937 chemotaxis protein CheAchromosome CDS1971989 1965 - 0.531807
cheB SF1932 chemotaxis-specific methylesterasechromosome CDS1966081 1050 - 0.537143
cheR SF1933 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1967133 861 - 0.538908
cheW SF1936 positive regulator of CheA protein activitychromosome CDS1971465 504 - 0.515873
cheZ SF1930 chemotaxis protein CheZchromosome CDS1965022 645 - 0.533333
fhiA SF0278 flagellar biosynthetic protein FlhAchromosome CDS295763 1740 - 0.584483
fimA SF4208 major type 1 subunit fimbrin (pilin)chromosome CDS4381556 549 - 0.510018
fimC SF4206 periplasmic chaperonechromosome CDS4380190 726 - 0.442149
fimF SF4202 minor fimbrial subunit, precursor polypeptidechromosome CDS4376171 531 - 0.489642
fimG SF4201 minor fimbrial subunit, precursor polypeptidechromosome CDS4375655 504 - 0.527778
fimI SF4207 fimbrial proteinchromosome CDS4380952 639 - 0.499218
flgA SF1078 flagellar basal body P-ring biosynthesis proteinchromosome CDS1117965 660 - 0.521212
flgB SF1079 flagellar basal body rod proteinchromosome CDS1118779 417 + 0.539568
flgE SF1080 flagellar hook proteinchromosome CDS1119614 1929 + 0.524624
flgG SF1082 flagellar basal body rod protein flgGchromosome CDS1122451 783 + 0.533844
flgH SF1083 flagellar L-ring protein precursorchromosome CDS1123286 699 + 0.53505
flgI SF1084 flagellar P-ring protein precursorchromosome CDS1123996 1098 + 0.533698
flgJ SF1085 flagellar biosynthesis proteinchromosome CDS1125093 942 + 0.539278
flgM SF1077 flagellar protein FlgMchromosome CDS1117596 294 - 0.530612
flgN SF1076 flagella synthesis protein FlgNchromosome CDS1117175 417 - 0.479616
flhB SF1924 flagellar biosynthesis proteinchromosome CDS1959784 1194 - 0.551089
fliC SF1966 flagellar biosynthesis proteinchromosome CDS1998100 1653 - 0.482154
fliD SF1967 flagellar hook-associated proteinchromosome CDS2000018 1407 + 0.522388
fliE SF1982 flagellar basal body proteinchromosome CDS2012670 315 - 0.549206
fliG SF1984 flagellar motor proteinchromosome CDS2014850 996 + 0.562249
fliH SF1985 flagellar assembly proteinchromosome CDS2015838 687 + 0.572052
fliI SF1986 flagellum-specific ATP synthasechromosome CDS2016524 1374 + 0.580058
fliJ SF1987 flagellar proteinchromosome CDS2017916 345 + 0.498551
fliK SF1988 flagellar hook-length control proteinchromosome CDS2018257 1128 + 0.544326
fliL SF1989 flagellar biosynthesis proteinchromosome CDS2019489 465 + 0.529032
fliM SF1990 flagellar motor switch proteinchromosome CDS2019958 1005 + 0.530348
fliN SF1991 flagellar motor switch proteinchromosome CDS2020959 414 + 0.557971
fliO SF1992 flagellar protein FliOchromosome CDS2021435 306 + 0.562092
fliP SF1993 flagellar biosynthesis proteinchromosome CDS2021863 615 + 0.520325
fliQ SF1994 flagellar biosynthesis proteinchromosome CDS2022487 270 + 0.511111
fliR SF1995 flagellar biosynthesis proteinchromosome CDS2022765 786 + 0.47201
fliS SF1968 flagellar protein FliSchromosome CDS2001449 411 + 0.481752
hofC SF0103 putative integral membrane proteinchromosome CDS113024 1203 - 0.525353
hopD SF3354 putative leader peptidasechromosome CDS3438033 288 + 0.465278
lpfA SF3807 putative major fimbrial subunitchromosome CDS3916796 573 - 0.474695
lpfC SF3723 putative long polar fimbriaechromosome CDS3831823 2523 + 0.470075
mbhA SF0277 flagellar motor proteinchromosome CDS297447 786 + 0.522901
motA SF1939 flagellar motor proteinchromosome CDS1974881 888 - 0.516892
motB SF1938 flagellar motor proteinchromosome CDS1973958 927 - 0.530744
mxiD CP0145 MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinerypCP301 CDS123950 1701 + 0.33157
nfrB SF0470 bacteriophage N4 receptor, outer membrane proteinchromosome CDS484845 2238 - 0.521448
ppdD SF0105 prelipin peptidase dependent proteinchromosome CDS115373 441 - 0.530612
sfmA SF0461 putative fimbrial-like proteinchromosome CDS476700 576 + 0.4375
sfmC SF0462 putative chaperonechromosome CDS477495 693 + 0.431457
spa33 CP0152 Spa33, component of the Mxi-Spa secretion machinerypCP301 CDS131944 747 + 0.314592
spa40 CP0156 type III secretion proteinpCP301 CDS134397 1029 + 0.317784
spa47 CP0149 type III secretion system ATPasepCP301 CDS129227 1293 + 0.392111
spy SF1483 periplasmic proteinchromosome CDS1519826 486 + 0.50823
tap SF1934 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS1968012 1602 - 0.538702
tar SF1935 methyl-accepting chemotaxis protein II, aspartate sensor receptorchromosome CDS1969659 1662 - 0.527076
trg SF1789 methyl-accepting chemotaxis protein III, ribose sensor receptorchromosome CDS1825835 1641 - 0.508836
tsr SF4386 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4557945 1665 + 0.53994
ybgD SF0578 putative fimbrial-like proteinchromosome CDS604259 567 + 0.47619
ybgP SF0580 putative chaperonechromosome CDS607350 732 + 0.494536
ybgQ SF0579 putative outer membrane proteinchromosome CDS604876 2460 + 0.493902
ycbF SF0945 putative chaperonechromosome CDS990987 738 + 0.509485
ycbS SF0941 putative outer membrane proteinchromosome CDS986284 2601 + 0.478278
yehB SF2171 putative outer membrane proteinchromosome CDS2193959 2481 - 0.455865
yehD SF2175 putative fimbrial-like proteinchromosome CDS2197986 525 - 0.405714
yggR SF2942 putative transport proteinchromosome CDS3032395 1026 - 0.540936
yifL SF3886 putative outer membrane lipoproteinchromosome CDS4006228 204 + 0.52451
yjaI SF4074 hypothetical proteinchromosome CDS4220245 567 - 0.516755
yraI SF3181 putative chaperonechromosome CDS3278961 696 + 0.448276
yraK SF3186 putative fimbrial proteinchromosome CDS3283548 1092 + 0.478938
yrfC SF3412 hypothetical proteinchromosome CDS3490649 540 - 0.553704
 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_0951 putative fimbrial-like proteinchromosome CDS998110 543 + 0.471455
NA SFV_3499 periplasmic fimbrial chaperone proteinchromosome CDS3567843 804 - 0.414179
NA SFV_2719 head-tail preconnector gp5chromosome CDS2785586 1506 + 0.589641
NA SFV_3498 probable fimbrial protein remnantchromosome CDS3566720 993 - 0.437059
NA SFV_3495 putative fimbriae usherchromosome CDS3563997 1149 - 0.443864
NA SFV_0944 putative fimbrial-like proteinchromosome CDS992301 471 + 0.454352
NA SFV_2193 putative fimbrial-like proteinchromosome CDS2225379 471 + 0.454352
betA SFV_0322 choline dehydrogenasechromosome CDS338171 1671 - 0.572711
cheA SFV_1934 Chemotaxis protein cheAchromosome CDS1979104 1965 - 0.531807
cheB SFV_1929 chemotaxis-specific methylesterasechromosome CDS1973196 1050 - 0.537143
cheR SFV_1930 Chemotaxis protein methyltransferasechromosome CDS1974248 861 - 0.538908
cheW SFV_1933 positive regulator of CheA protein activitychromosome CDS1978580 504 - 0.515873
cheZ SFV_1927 Chemotaxis protein cheZchromosome CDS1972137 645 - 0.534884
exbB SFV_3057 Biopolymer transport exbB proteinchromosome CDS3120399 720 - 0.534722
ffh SFV_2860 Signal recognition particle proteinchromosome CDS2922914 1362 + 0.541116
fhiA SFV_0300 flagellar biosynthetic protein FlhAchromosome CDS314464 1740 + 0.583908
fimA SFV_4213 major type 1 subunit fimbrin (pilin)chromosome CDS4352224 549 - 0.51184
fimC SFV_4210 Chaperone protein fimC precursorchromosome CDS4350081 657 - 0.444444
fimD SFV_4209 Outer membrane usher protein fimD precursorchromosome CDS4347378 2637 - 0.482366
fimF SFV_4208 fimbrial morphologychromosome CDS4346838 531 - 0.489642
fimG SFV_4207 fimbrial morphologychromosome CDS4346322 504 - 0.529762
flgB SFV_1095 Flagellar basal body proteinchromosome CDS1136848 417 + 0.532374
flgD SFV_1097 basal-body rod modification protein FlgDchromosome CDS1137683 696 + 0.54454
flgE SFV_1098 flagellar hook protein FlgEchromosome CDS1138403 1209 + 0.514475
flgF SFV_1099 flagellar basal-body rod protein FlgFchromosome CDS1139631 756 + 0.595238
flgG SFV_1100 flagellar basal-body rod protein FlgGchromosome CDS1140524 783 + 0.535121
flgH SFV_1101 flagellar L-ring protein precursor FlgHchromosome CDS1141350 708 + 0.533898
flgI SFV_1102 flagellar P-ring protein FlgIchromosome CDS1142069 1098 + 0.534608
flgJ SFV_1103 flagellar protein FlgJchromosome CDS1143136 972 + 0.537037
flgL SFV_1105 flagellar hook-associated protein FlgLchromosome CDS1145827 954 + 0.505241
flgM SFV_1093 Negative regulator of flagellin synthesischromosome CDS1135665 294 - 0.530612
flgN SFV_1092 flagellar biosynthetic proteinchromosome CDS1135244 417 - 0.479616
flhB SFV_1921 putative part of export apparatus for flagellar proteinschromosome CDS1966898 1077 - 0.548747
fliC SFV_1967 flagellinchromosome CDS2006772 1653 - 0.481549
fliD SFV_1968 flagellar filament capping proteinchromosome CDS2008690 1407 + 0.522388
fliE SFV_1980 flagellar hook-basal body complex protein FliEchromosome CDS2021341 315 - 0.549206
fliG SFV_1982 flagellar motor switch protein FliGchromosome CDS2023592 924 + 0.561688
fliH SFV_1983 flagellar protein FliHchromosome CDS2024508 687 + 0.572052
fliI SFV_1984 flagellum-specific ATP synthasechromosome CDS2025194 1374 + 0.577875
fliK SFV_1986 flagellar hook-length control proteinchromosome CDS2026927 1128 + 0.544326
fliL SFV_1987 flagellar protein FliLchromosome CDS2028159 465 + 0.529032
fliM SFV_1988 flagellar motor switch protein FliMchromosome CDS2028583 1050 + 0.526667
fliN SFV_1989 flagellar motor switch protein FliNchromosome CDS2029629 414 + 0.557971
fliP SFV_1991 flagellar biosynthetic protein FliPchromosome CDS2030410 738 + 0.53794
fliQ SFV_1992 flagellar biosynthetic protein FliQchromosome CDS2031157 270 + 0.511111
fliR SFV_1993 flagellar biosynthetic protein FliRchromosome CDS2031435 786 + 0.47201
fliS SFV_1969 flagellar protein FliSchromosome CDS2010121 411 + 0.484185
hofC SFV_0097 Protein transport protein hofCchromosome CDS112694 1203 - 0.523691
hofQ SFV_3396 putative transport porteinchromosome CDS3450595 1161 - 0.544358
hopD SFV_3341 putative leader peptidasechromosome CDS3399916 468 + 0.478632
htrB SFV_1077 heat shock proteinchromosome CDS1121489 984 - 0.520325
lpfA SFV_3774 putative major fimbrial subunitchromosome CDS3865552 573 + 0.474695
lpfC SFV_3777 putative long polar fimbriaechromosome CDS3868267 2520 + 0.470238
lspA SFV_0021 prolipoprotein signal peptidase (SPase II)chromosome CDS24228 495 + 0.539394
malK SFV_4179 ATP-binding component of transport system for maltosechromosome CDS4313289 1116 - 0.547491
mbhA SFV_0301 putative motility proteinchromosome CDS313734 786 - 0.522901
motA SFV_1936 flagellar motor proteinchromosome CDS1981996 888 - 0.518018
motB SFV_1935 flagellar motor proteinchromosome CDS1981073 927 - 0.532902
msbB SFV_1857 lipid A biosynthesis proteinchromosome CDS1903714 1026 - 0.509747
ppdD SFV_0099 prelipin peptidase dependent proteinchromosome CDS115043 441 - 0.530612
secD SFV_0373 SecDchromosome CDS391277 1815 + 0.533884
secG SFV_3205 protein export - membrane proteinchromosome CDS3278014 408 - 0.492647
sfmA SFV_0488 putative fimbrial-like proteinchromosome CDS514289 525 + 0.44381
sfmF SFV_0494 putative fimbrial-like proteinchromosome CDS519076 516 + 0.503876
spy SFV_1477 periplasmic proteinchromosome CDS1522283 486 + 0.50823
tap SFV_1931 lambdoid prophage Qin Tail fiber assembly protein-like proteinchromosome CDS1975127 1602 - 0.539326
tar SFV_1932 methyl-accepting chemotaxis protein IIchromosome CDS1976774 1662 - 0.526474
tolB SFV_0596 translocation protein TolB precursorchromosome CDS621322 1293 - 0.532096
trg SFV_1784 methyl-accepting chemotaxis protein IIIchromosome CDS1825169 1641 - 0.508836
tsr SFV_4386 methyl-accepting chemotaxis protein Ichromosome CDS4525020 1665 + 0.539339
ybbJ SFV_0461 hypothetical proteinchromosome CDS488369 447 - 0.581656
ybgD SFV_0616 putative fimbrial-like proteinchromosome CDS647357 567 + 0.47619
ybgP SFV_0618 putative chaperonechromosome CDS650448 732 + 0.495902
ybgQ SFV_0617 putative outer membrane proteinchromosome CDS647932 2502 + 0.493605
ycaH SFV_0916 tetraacyldisaccharide 4'-kinasechromosome CDS959089 987 + 0.547112
ycbF SFV_0953 putative chaperonechromosome CDS999141 738 + 0.512195
ycbR SFV_0948 putative chaperonechromosome CDS993712 702 + 0.448718
ycbS SFV_0949 putative outer membrane proteinchromosome CDS994438 2601 + 0.478662
yccC SFV_0990 hypothetical proteinchromosome CDS1038589 2181 - 0.504356
yegH SFV_2122 putative transport proteinchromosome CDS2146099 1650 + 0.523636
yehB SFV_2164 putative outer membrane proteinchromosome CDS2196259 2481 - 0.455462
yehC SFV_2165 putative chaperonechromosome CDS2198755 564 - 0.384752
yfcS SFV_2405 putative chaperonechromosome CDS2453699 723 - 0.485477
yfjD SFV_2858 hypothetical proteinchromosome CDS2920649 1263 - 0.509105
yidC SFV_3807 60 kDa inner-membrane proteinchromosome CDS3900163 1596 - 0.538847
yifL SFV_3691 hypothetical proteinchromosome CDS3777232 204 - 0.52451
yigU SFV_3660 hypothetical proteinchromosome CDS3747016 777 - 0.513514
yihK SFV_3630 putative GTP-binding factorchromosome CDS3710087 1698 - 0.531213
yiiO SFV_3580 Uncharacterized periplasmic proteinchromosome CDS3660071 501 - 0.500998
yjaI SFV_4074 hypothetical proteinchromosome CDS4191428 567 - 0.516755
yoaE SFV_1413 putative transport proteinchromosome CDS1459253 1551 + 0.539007
yohG SFV_2214 putative channel/filament proteinschromosome CDS2243803 1527 - 0.544204
yraI SFV_3171 putative chaperonechromosome CDS3242618 696 + 0.449713
yraK SFV_3175 putative fimbrial proteinchromosome CDS3247205 1092 + 0.478938
yrfC SFV_3399 hypothetical proteinchromosome CDS3452563 540 - 0.555556
 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_2420 putative tail component of prophagechromosome CDS2558317 741 - 0.578947
NA SSON_0024 hypothetical proteinchromosome CDS23714 804 - 0.402985
NA SSON_3900 putative fimbrial chaperonechromosome CDS4116983 303 + 0.376238
NA SSON_0026 hypothetical proteinchromosome CDS25267 369 - 0.384824
NA SSO_P144 adhesion protein, fragmentpSS_046 CDS129560 258 + 0.391473
NA SSON_0947 putative fimbrial-like proteinchromosome CDS1021484 564 + 0.47695
NA SSON_2436 putative endopeptidasechromosome CDS2571789 459 - 0.51634
NA SSON_1980 hypothetical proteinchromosome CDS2081218 279 + 0.437276
NA SSON_2391 putative minor fimbrial subunitchromosome CDS2521916 525 - 0.457143
cheA SSON_1229 sensory transducer kinase between chemo- signal receptors and CheB and CheYchromosome CDS1302515 1965 + 0.531298
cheB SSON_1234 response regulator for chemotaxischromosome CDS1309338 1050 + 0.537143
cheR SSON_1233 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1308475 861 + 0.537747
cheW SSON_1230 positive regulator of CheA protein activitychromosome CDS1304500 504 + 0.515873
cheZ SSON_1236 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorchromosome CDS1310802 645 + 0.533333
csgA SSON_1053 curlin major subunitchromosome CDS1133630 453 + 0.507726
ecpD SSON_0152 probable pilin chaperone similar to PapDchromosome CDS169651 741 - 0.442645
fhiA SSON_0273 flagellar biosynthesischromosome CDS299468 1740 - 0.574713
flgA SSON_1092 flagellar protein for assembly of basal-body periplasmic P ringchromosome CDS1171509 660 - 0.527273
flgB SSON_1093 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172323 417 + 0.534772
flgC SSON_1094 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1172743 405 + 0.533333
flgD SSON_1095 flagellar protein for initiation of hook assemblychromosome CDS1173159 696 + 0.548851
flgE SSON_1096 flagellar hook proteinchromosome CDS1173879 1206 + 0.515755
flgF SSON_1097 flagellar protein for cell-proximal portion of basal-body rodchromosome CDS1175104 756 + 0.589947
flgH SSON_1099 flagellar protein for basal-body outer-membrane L ringchromosome CDS1176856 699 + 0.53505
flgI SSON_1100 P-ring of flagella basal bodychromosome CDS1177566 1098 + 0.540073
flgJ SSON_1101 flagellar biosynthesis proteinchromosome CDS1178663 942 + 0.544586
flgK SSON_1102 flagellar hook-filament junction protein 1chromosome CDS1179670 1644 + 0.51764
flgL SSON_1103 flagellar hook-filament junction proteinchromosome CDS1181325 954 + 0.507338
flgM SSON_1091 flagellar proteinchromosome CDS1171140 294 - 0.520408
flgN SSON_1090 protein of flagellar biosynthesischromosome CDS1170719 417 - 0.479616
flhB SSON_1240 putative part of export apparatus for flagellar proteinschromosome CDS1314044 972 + 0.544239
fliC SSON_1193 flagellar filament structural proteinchromosome CDS1271890 1575 + 0.428571
fliE SSON_1995 flagellar basal-body componentchromosome CDS2093645 315 - 0.539683
fliF SSON_1996 flagellar basal-body MS(membrane and supramembrane)-ring and collar proteinchromosome CDS2094175 1659 + 0.546715
fliG SSON_1997 FliGchromosome CDS2095826 996 + 0.557229
fliH SSON_1998 flagellar biosynthesis proteinchromosome CDS2096793 708 + 0.573446
fliI SSON_1999 flagellum-specific ATP synthasechromosome CDS2097500 1374 + 0.580058
fliJ SSON_2000 flagellar fliJ proteinchromosome CDS2098892 444 + 0.527027
fliK SSON_2001 flagellar hook-length control proteinchromosome CDS2099332 1128 + 0.549645
fliL SSON_2002 flagellar biosynthesischromosome CDS2100564 465 + 0.526882
fliM SSON_2003 flagellar motor switch protein FliMchromosome CDS2101033 1005 + 0.529353
fliN SSON_2004 FliNchromosome CDS2102034 414 + 0.548309
fliO SSON_2005 flagellar biosynthesischromosome CDS2102450 366 + 0.54918
fliP SSON_2006 flagellar biosynthesischromosome CDS2102815 738 + 0.531165
fliQ SSON_2007 flagellar biosynthesischromosome CDS2103562 270 + 0.514815
fliR SSON_2008 flagellar biosynthesischromosome CDS2103840 786 + 0.477099
fliS SSON_1981 flagellar repressor of class 3a and 3b operonschromosome CDS2081511 411 + 0.493917
hofC SSON_0114 putative integral membrane proteinchromosome CDS123749 1203 - 0.526185
lpfA SSON_3899 putative major fimbrial subunitchromosome CDS4116363 573 + 0.47644
mbhA SSON_0272 putative motility proteinchromosome CDS301152 786 + 0.52799
motA SSON_1227 proton conductor component of motorchromosome CDS1300700 888 + 0.51464
motB SSON_1228 MotBchromosome CDS1301584 927 + 0.528587
mxiD SSO_P107 MxiDpSS_046 CDS97171 1701 + 0.33157
ppdA SSON_2983 prepilin peptidase dependent protein Achromosome CDS3133322 471 - 0.541401
ppdD SSON_0116 prelipin peptidase dependent proteinchromosome CDS126337 441 - 0.52381
sfmF SSON_0507 putative fimbrial-like proteinchromosome CDS536175 516 + 0.498062
spa33 SSO_P114 Spa33pSS_046 CDS105030 882 + 0.316327
spa40 SSO_P117 Spa40pSS_046 CDS107618 1029 + 0.316812
spa47 SSO_P111 Spa47pSS_046 CDS102448 1293 + 0.392111
spy SSON_1414 periplasmic protein related to spheroblast formationchromosome CDS1489467 462 + 0.519481
tap SSON_1232 methyl-accepting chemotaxis protein IVchromosome CDS1306855 1602 + 0.535581
tar SSON_1231 methyl-accepting chemotaxis protein IIchromosome CDS1305148 1662 + 0.529483
trg SSON_1721 methyl-accepting chemotaxis protein IIIchromosome CDS1823714 1641 - 0.511274
yadN SSON_0153 putative fimbrial-like proteinchromosome CDS170496 585 - 0.441026
ybgD SSON_0670 putative fimbrial-like proteinchromosome CDS712918 567 - 0.477954
ybgP SSON_0668 putative chaperonechromosome CDS709663 732 - 0.495902
ycbF SSON_0948 putative chaperonechromosome CDS1022013 738 + 0.51897
ycbQ SSON_0942 putative fimbrial-like proteinchromosome CDS1015950 552 + 0.434783
ycbR SSON_0943 putative chaperonechromosome CDS1016584 702 + 0.451567
yehC SSON_2159 putative chaperonechromosome CDS2263400 720 - 0.391667
yehD SSON_2160 putative fimbrial-like proteinchromosome CDS2264154 543 - 0.405157
yfcS SSON_2393 putative chaperonechromosome CDS2523427 645 - 0.486822
yfcU SSON_2394 PapC-like porin proteinchromosome CDS2524198 2643 - 0.510027
yggR SSON_3105 putative protein transportchromosome CDS3265817 1026 - 0.54386
ygiL SSON_3180 putative fimbrial-like proteinchromosome CDS3338921 552 + 0.443841
yifL SSON_3981 hypothetical proteinchromosome CDS4203744 204 + 0.52451
yiiO SSON_4083 Uncharacterized periplasmic proteinchromosome CDS4319859 504 + 0.5
yjaI SSON_4175 hypothetical proteinchromosome CDS4419475 567 - 0.516755
yqiH SSON_3183 hypothetical proteinchromosome CDS3342966 759 + 0.389987
yraJ SSON_3289 putative outer membrane proteinchromosome CDS3464292 2517 + 0.473977
yraK SSON_3291 putative fimbrial proteinchromosome CDS3468293 954 + 0.474843
yrbF SSON_3343 putative ATP-binding component of a transport systemchromosome CDS3518330 810 - 0.545679
 
Sodalis glossinidius str. morsitans, morsitans
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SG2058 flagellar biosynthetic protein FliRchromosome CDS3550237 789 + 0.586819
NA SG0056 flagellar protein FliSchromosome CDS72218 390 - 0.533333
NA SG1762 putative fimbrial biogenesis proteinchromosome CDS3017703 507 - 0.595661
NA SG0047 flagellar protein FliLchromosome CDS64286 489 - 0.509202
NA SG0045 flagellar motor switch protein FliNchromosome CDS62870 405 - 0.604938
NA SG2179 hypothetical proteinchromosome CDS3796599 507 - 0.514793
NA SG0050 flagellum-specific ATP synthase FliIchromosome CDS66483 1377 - 0.608569
NA SG2081 type III secretion apparatuschromosome CDS3587509 1059 - 0.499528
NA SG2059 putative flagellar hook formation protein FlgDchromosome CDS3556064 417 - 0.568345
NA SG0054 flagellar hook-basal body complex protein FliEchromosome CDS71471 324 + 0.5
NA SG1301 putative type III secretion ATP synthasechromosome CDS2168462 1329 + 0.635064
NA SG2057 flagellar biosynthetic protein FliQchromosome CDS3549965 270 + 0.588889
NA SG1304 putative type III secretion apparatuschromosome CDS2170503 1053 + 0.646724
NA SG2066 chemotaxis protein CheWchromosome CDS3567083 450 - 0.548889
NA SG0041 flagellar protein FliRchromosome CDS60611 789 - 0.590621
NA SG1181 hypothetical proteinchromosome CDS1985574 741 + 0.504723
NA SG1693 hypothetical proteinchromosome CDS2897575 762 - 0.468504
NA SG0561 type III secretion apparatus InvGchromosome CDS956104 1761 + 0.521295
NA SG0575 hypothetical proteinchromosome CDS970703 1560 + 0.471795
NA SG0051 flagellar assembly protein FliHchromosome CDS67831 714 - 0.631653
NA SG0035 flagellar basal-body rod protein FlgGchromosome CDS54108 783 + 0.578544
NA SG0568 type III secretion apparatus SpaOchromosome CDS964173 915 + 0.547541
NA SGP2_0018 hypothetical proteinpSG2 CDS22521 291 + 0.47079
NA SG0462 hypothetical proteinchromosome CDS797923 1236 - 0.639159
NA SG0048 flagellar hook-length control protein FliKchromosome CDS64908 1119 - 0.620197
NA SG0023 chemotaxis protein MotAchromosome CDS42706 897 + 0.479376
NA SG0046 flagellar motor switch protein FliMchromosome CDS63267 1023 - 0.604106
NA SG2052 flagellar protein FliLchromosome CDS3546733 462 + 0.612554
NA SG2074 putative type III secretion apparatuschromosome CDS3582687 648 - 0.583333
NA SG0036 flagellar L-ring protein precursor FlgHchromosome CDS54954 762 + 0.58399
NA SG0042 flagellar protein FliQchromosome CDS61407 270 - 0.555556
NA SG0037 flagellar P-ring protein precursor FlgIchromosome CDS55746 1098 + 0.600182
NA SG0049 flagellar protein FliJchromosome CDS66023 450 - 0.522222
NA SGP1_0008 TriJpSG1 CDS23946 948 + 0.512658
NA SG0030 flagellar basal-body rod protein FlgBchromosome CDS50405 414 + 0.490338
NA SG2055 flagellar biosynthesis protein FliOchromosome CDS3548638 549 + 0.666667
NA SG0052 flagellar motor switch protein FliGchromosome CDS68537 990 - 0.576768
NA SG2064 chemotaxis protein CheZchromosome CDS3562660 681 - 0.613803
NA SG2054 flagellar motor switch protein FliNchromosome CDS3548146 399 + 0.598997
NA SG0025 flagellar biosynthetic protein FlhBchromosome CDS45031 1164 + 0.57646
NA SG0057 flagellar hook-associated protein 2 FliDchromosome CDS72688 1461 - 0.502396
NA SG0033 flagellar hook protein FlgEchromosome CDS52102 1215 + 0.493827
NA SG1690 hypothetical proteinchromosome CDS2893851 459 - 0.575163
NA SG1282 type III secretion apparatuschromosome CDS2155025 1485 + 0.503704
NA SG0028 negative regulator of flagellin synthesis FlgMchromosome CDS49244 225 - 0.528889
NA SG0040 flagellar hook-associated protein 3 FlgLchromosome CDS59619 942 + 0.558386
NA SG0031 flagellar basal-body rod protein FlgCchromosome CDS50825 405 + 0.560494
NA SG0463 putative prelipin peptidase dependent proteinchromosome CDS799621 417 - 0.606715
NA SG0572 type III secretion apparatus SpaSchromosome CDS966819 1113 + 0.442049
NA SG1968 putative phage anti-termination proteinchromosome CDS3392946 396 + 0.474747
NA SG0034 flagellar basal-body rod protein FlgFchromosome CDS53329 759 + 0.641634
NA SG0058 flagellin FliCchromosome CDS74875 1260 + 0.484921
NA SG0029 flagellar basal body P-ring formation protein FlgAchromosome CDS49511 717 - 0.601116
NA SG0044 flagellar protein FliOchromosome CDS62495 375 - 0.685333
NA SG2053 flagellar motor switch protein FliMchromosome CDS3547200 954 + 0.546122
NA SG0834 hypothetical proteinchromosome CDS1389696 546 + 0.606227
NA SG0565 type III secretion apparatus SpaL/InvCchromosome CDS961568 1308 + 0.529052
NA SG0026 flagellar protein FlhAchromosome CDS46175 2097 + 0.574154
NA SG1157 hypothetical proteinchromosome CDS1936652 408 + 0.5
NA SG2091 type III secretion apparatus InvGchromosome CDS3596667 1641 - 0.596587
NA SG1508 hypothetical proteinchromosome CDS2534730 516 - 0.544574
NA SG0038 flagellar protein FlgJchromosome CDS56843 918 + 0.636166
NA SG0053 flagellar basal-body M-ring protein FliFchromosome CDS69523 1707 - 0.595782
NA SG2088 type III secretion apparatus SpaL/InvCchromosome CDS3592573 1296 - 0.62037
NA SG1868 hypothetical proteinchromosome CDS3200011 468 - 0.470085
NA SG0043 flagellar protein FliPchromosome CDS61695 771 - 0.581064
NA SG2060 flagellar basal-body rod protein FlgBchromosome CDS3556900 393 - 0.56743
NA SG0039 flagellar hook-associated protein 1 FlgKchromosome CDS57892 1671 + 0.54219
NA SG2065 response regulator for chemotaxischromosome CDS3563282 900 - 0.606667
NA SG2063 putative flagellar biosynthetic protein FlhBchromosome CDS3561750 738 - 0.556911
NA SG0930 hypothetical proteinchromosome CDS1523670 618 - 0.453074
NA SG2061 negative regulator of flagellin synthesis FlgMchromosome CDS3558622 315 + 0.504762
NA SG2056 flagellar biosynthesis protein FliPchromosome CDS3549183 762 + 0.58399
NA SG0032 flagellar basal-body rod modification protein FlgDchromosome CDS51241 810 + 0.523457
NA SG0024 chemotaxis protein MotBchromosome CDS43599 1026 + 0.568226
NA SG2085 type III secretion apparatus SpaOchromosome CDS3590306 1017 - 0.596853
 
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
flgA WGLp037 hypothetical proteinchromosome CDS44781 678 - 0.215339
flgB WGLp038 hypothetical proteinchromosome CDS45617 411 + 0.23601
flgC WGLp039 hypothetical proteinchromosome CDS46031 402 + 0.281095
flgD WGLp040 hypothetical proteinchromosome CDS46485 840 + 0.208333
flgE WGLp041 hypothetical proteinchromosome CDS47376 1233 + 0.292782
flgF WGLp042 hypothetical proteinchromosome CDS48619 741 + 0.276653
flgG WGLp043 hypothetical proteinchromosome CDS49376 783 + 0.312899
flgH WGLp044 hypothetical proteinchromosome CDS50205 687 + 0.267831
flgI WGLp045 flagellar P-ring protein precursorchromosome CDS50901 1113 + 0.297394
flgK WGLp046 hypothetical proteinchromosome CDS52406 1638 + 0.211844
flgL WGLp047 hypothetical proteinchromosome CDS54078 942 + 0.219745
flhA WGLp035 hypothetical proteinchromosome CDS42014 2187 + 0.270233
flhB WGLp034 hypothetical proteinchromosome CDS40924 1158 + 0.221071
fliC WGLp064 hypothetical proteinchromosome CDS68298 1266 + 0.312796
fliD WGLp063 hypothetical proteinchromosome CDS66578 1518 - 0.20751
fliE WGLp061 hypothetical proteinchromosome CDS65797 330 + 0.193939
fliF WGLp060 hypothetical proteinchromosome CDS63846 1710 - 0.254971
fliG WGLp059 hypothetical proteinchromosome CDS62863 1014 - 0.248521
fliH WGLp058 hypothetical proteinchromosome CDS62211 672 - 0.241071
fliI WGLp057 hypothetical proteinchromosome CDS60838 1377 - 0.300654
fliJ WGLp056 hypothetical proteinchromosome CDS60381 453 - 0.163355
fliL WGLp054 hypothetical proteinchromosome CDS58599 489 - 0.253579
fliM WGLp053 hypothetical proteinchromosome CDS57633 960 - 0.172917
fliN WGLp052 hypothetical proteinchromosome CDS57221 408 - 0.257353
fliO WGLp051 hypothetical proteinchromosome CDS56895 330 - 0.145455
fliP WGLp050 hypothetical proteinchromosome CDS56094 792 - 0.242424
fliQ WGLp049 hypothetical proteinchromosome CDS55812 273 - 0.263736
fliR WGLp048 hypothetical proteinchromosome CDS55039 777 - 0.214929
fliS WGLp062 hypothetical proteinchromosome CDS66160 393 - 0.188295
motA WGLp032 flagellar motor proteinchromosome CDS38997 891 + 0.316498
motB WGLp033 flagellar motor proteinchromosome CDS39892 981 + 0.304791
 
Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YE3165 hypothetical proteinchromosome CDS3438298 333 - 0.447447
NA YE1248 ABC transporter, ATP-binding componentchromosome CDS1392345 804 + 0.538557
NA YE1085 hypothetical proteinchromosome CDS1216305 1620 + 0.514198
NA YE0403 hypothetical proteinchromosome CDS468666 1332 - 0.468468
NA YE0545 putative oxidoreductasechromosome CDS622394 1503 - 0.389887
NA YE2695 frimbrial proteinchromosome CDS2928597 561 - 0.449198
NA YE2553 flagellar P-ring protein precursorchromosome CDS2746814 1077 - 0.519034
NA YEP0057 hypothetical proteinpYVe8081 CDS41132 303 - 0.386139
NA YE2588 putative methyl-accepting chemotaxis proteinchromosome CDS2784461 1740 + 0.468391
NA YE4123A Putative fimbrial chaperonechromosome CDS4512828 768 - 0.441406
NA YE2668 probable pili assembly chaperonechromosome CDS2892628 741 + 0.450742
NA YE3482 hypothetical proteinchromosome CDS3793238 2643 - 0.513053
NA YE1858 putative chaperone proteinchromosome CDS2038586 750 - 0.458667
NA YE0409 methyl-accepting chemotaxis proteinchromosome CDS478386 1581 + 0.469956
NA YE2541 flagellar protein FliJchromosome CDS2735975 447 + 0.474273
NA YE2559 flagellar basal-body rod protein FlgCchromosome CDS2752646 405 - 0.518519
NA YE1177 putative conjugal transfer proteinchromosome CDS1316984 1401 - 0.448965
NA YE2550 flagellar hook-associated protein 3chromosome CDS2742771 981 - 0.48318
NA YE3645 ExbD/TolR-family transport proteinchromosome CDS3972581 426 - 0.478873
NA YE0159 putative outer membrane usher proteinchromosome CDS187956 2220 - 0.449099
NA YE3316 hypothetical proteinchromosome CDS3624428 537 - 0.435754
NA YE2551 flagellar hook-associated protein 1chromosome CDS2743865 1665 - 0.47988
NA YE0794 putative outer-membrane efflux lipoproteinchromosome CDS919144 1407 + 0.518124
NA YE1883 putative sugar ABC transporterchromosome CDS2066127 1128 - 0.452128
NA YE2557 flagellar hook protein FlgEchromosome CDS2750341 1260 - 0.509524
NA YE3615 putative methyl-accepting chemotaxis proteinchromosome CDS3939448 1575 - 0.460952
NA YE2522 thermoregulated motility proteinchromosome CDS2717595 1101 - 0.484105
NA YE2694 putative pili chaperone proteinchromosome CDS2927692 798 - 0.403509
NA YE1112 outer membrane usher proteinchromosome CDS1245760 2574 - 0.545066
NA YE2971 putative methyl-accepting chemotaxis proteinchromosome CDS3233420 1659 - 0.486438
NA YE2524 flagellar hook-associated protein 2chromosome CDS2720258 1401 + 0.450393
NA YE1583 hypothetical proteinchromosome CDS1784201 636 + 0.446541
NA YE1111 putative fimbrial subunitchromosome CDS1244653 1032 - 0.372093
NA YE0161 putative fimbrial proteinchromosome CDS191517 531 - 0.442561
NA YE2556 flagellar basal-body rod protein FlgFchromosome CDS2749564 756 - 0.55291
NA YE3504 putative type IV pilus operon lipoproteinchromosome CDS3816033 1689 - 0.505625
NA YE3646 MotA/TolQ/ExbB proton channel family proteinchromosome CDS3973010 714 - 0.519608
NA YE2558 basal-body rod modification protein FlgDchromosome CDS2751944 576 - 0.539931
NA YE2665 probable pili assembly chaperonechromosome CDS2887875 735 + 0.446259
NA YE3628 outer membrane efflux proteinchromosome CDS3953989 1299 + 0.555812
NA YE1370 putative dehydrogenase subunitchromosome CDS1526501 1653 - 0.532365
NA YE3888 hypothetical proteinchromosome CDS4248437 1122 - 0.501783
NA YE2313 putative phage tail proteinchromosome CDS2517687 2796 - 0.500715
NA YE2686 putative OmpA family proteinchromosome CDS2917876 1377 - 0.502542
NA YE2408 putative hemolysin activator proteinchromosome CDS2600399 1668 - 0.367506
NA YE1857 probable outer membrane usher proteinchromosome CDS2036058 2442 - 0.489353
NA YE3501 type IV pilus integral membrane proteinchromosome CDS3811593 1110 - 0.517117
NA YE4183 Putative methyl-accepting chemotaxis receptor proteinchromosome CDS4583178 1959 - 0.467075
NA YE0463 putative sugar ABC transporter, ATP-binding proteinchromosome CDS539942 1116 + 0.513441
NA YE3432 hypothetical proteinchromosome CDS3746333 1053 - 0.48528
NA YE2538 flagellar motor switch protein FliGchromosome CDS2732814 993 + 0.533736
NA YE2555 flagellar basal-body rod protein FlgGchromosome CDS2748755 654 - 0.513761
NA YE1923 antidote proteinchromosome CDS2102270 315 + 0.546032
NA YE2552 flagellar protein FlgJchromosome CDS2745852 924 - 0.52381
NA YE3341 prepilin peptidasechromosome CDS3653632 834 - 0.320144
NA YE2537 flagellar M-ring proteinchromosome CDS2731117 1701 + 0.529688
NA YE2573 methyl-accepting chemotaxis proteinchromosome CDS2767283 1638 - 0.496337
NA YE2664 fimbrial proteinchromosome CDS2887252 531 + 0.472693
NA YE2536 flagellar hook-basal body complex protein FliEchromosome CDS2730477 312 - 0.458333
NA YE2032 Phage/plasmid maintenance toxin/antidote system protein (toxin)chromosome CDS2222976 357 - 0.428571
NA YE1113 putative fimbrial chaperone proteinchromosome CDS1248296 681 - 0.493392
NA YE0480 exported proteinchromosome CDS555105 1737 + 0.440415
NA YE2560 flagellar basal-body rod protein FlgBchromosome CDS2753056 414 - 0.497585
NA YE1071 putative fimbrial biogenesis proteinchromosome CDS1199229 750 + 0.482667
NA YE3241 probable outer membrane efflux proteinchromosome CDS3533561 1467 + 0.504431
NA YE4166 hypothetical proteinchromosome CDS4563543 1302 - 0.526114
NA YE3502 putative type IV pilus proteinchromosome CDS3812695 1554 - 0.512227
NA YE2540 flagellum-specific ATP synthasechromosome CDS2734554 1332 + 0.552553
NA YE2779 hypothetical proteinchromosome CDS3015331 1587 + 0.485192
NA YE1922 putative proteic toxin proteinchromosome CDS2101983 288 + 0.447917
NA YE2545 flagellar motor switch protein FliNchromosome CDS2739440 417 + 0.482014
NA YE2554 flagellar L-ring protein precursorchromosome CDS2747947 684 - 0.52193
NA YE2666 probable fimbrial usher proteinchromosome CDS2888658 2625 + 0.504381
NA YE3565 general secretion pathway protein Dchromosome CDS3879335 1977 + 0.461811
NA YE4085 putative hemolysin activator proteinchromosome CDS4466537 1626 - 0.447109
NA YE3976 putative membrane transport proteinchromosome CDS4320594 1116 - 0.466846
NA YE2693 outer membrane usher proteinchromosome CDS2924913 2676 - 0.463378
NA YE2692 fimbrial proteinchromosome CDS2924326 603 - 0.432836
NA YE3528 hypothetical proteinchromosome CDS3841009 1341 - 0.512304
NA YE0157 putative chaperone proteinchromosome CDS185847 678 - 0.457227
CheC2 YE2544 flagellar motor switch protein FliMchromosome CDS2738443 1005 + 0.494527
aer YE1731 putative methyl-accepting chemotaxis proteinchromosome CDS1929885 1560 - 0.501282
azi YE0681 preprotein translocase SecAchromosome CDS785973 2715 + 0.482505
b2612/b2613 YE0840 hypothetical proteinchromosome CDS967198 1281 - 0.471507
b3836 YE0259 Sec-independent protein translocase protein TatAchromosome CDS299209 267 + 0.430712
bipA YE0029 putative GTPasechromosome CDS38529 1824 + 0.496162
cheA YE2577 chemotaxis protein CheAchromosome CDS2771738 2055 - 0.495864
cheB YE2571 protein-glutamate methylesterasechromosome CDS2765345 1050 - 0.514286
cheD YE2575 methyl-accepting chemotaxis proteinchromosome CDS2769105 1674 - 0.482079
cheD YE3338 putative methyl-accepting chemotaxis proteinchromosome CDS3650397 1542 - 0.425422
cheM YE4139 methyl-accepting chemotaxis protein IIchromosome CDS4531081 1950 + 0.473846
cheR YE2572 chemotaxis protein methyltransferasechromosome CDS2766394 828 - 0.501208
cheW YE2576 chemotaxis protein CheWchromosome CDS2771060 498 - 0.471888
cheZ YE2569 chemotaxis protein CheZchromosome CDS2764110 645 - 0.483721
clpP YE3134 ATP-dependent Clp protease proteolytic subunit ClpPchromosome CDS3409738 624 - 0.463141
ddg YE3829 hypothetical proteinchromosome CDS4173848 921 + 0.508143
ffh YE0842 signal recognition particle proteinchromosome CDS969505 1362 + 0.495595
flgA YE2561 flagella basal body P-ring formation protein FlgAchromosome CDS2753731 603 + 0.504146
flgM YE2562 negative regulator of flagellin synthesischromosome CDS2754540 258 + 0.484496
flhA YE2566 flagellar biosynthesis protein FlhAchromosome CDS2758732 2079 - 0.525253
flhB YE2567 flagellar biosynthetic protein FlhBchromosome CDS2760810 1152 - 0.522569
fliC2 YE2521 flagellinchromosome CDS2716260 1146 - 0.490401
fliC3 YE2523 flagellinchromosome CDS2718885 1110 - 0.493694
fliH YE2539 flagellar assembly proteinchromosome CDS2733799 723 + 0.521438
fliK YE2542 flagellar hook-length control protein FliKchromosome CDS2736550 1227 + 0.541157
fliO YE2546 flagellar protein FliOchromosome CDS2740030 411 + 0.501217
fliP YE2547 flagellar biosynthetic protein FliPchromosome CDS2740503 687 + 0.50655
fliQ YE2548 flagellar biosynthetic protein FliQchromosome CDS2741201 270 + 0.496296
fliR YE2549 flagellar biosynthetic protein FliRchromosome CDS2741473 783 + 0.480204
fliS YE2525 flagellar protein FliSchromosome CDS2721669 399 + 0.498747
ftsY YE0225 cell division proteinchromosome CDS260574 1524 + 0.481627
hasF YE3665 ABC-transporter outer membrane componentchromosome CDS3996933 1482 + 0.491228
hofC YE0688 putative type II secretion system proteinchromosome CDS792555 1200 - 0.4375
hofC YE0689 HofCchromosome CDS793751 1455 - 0.451546
htrB YE1612 putative lipid A biosynthesis lauroyl acyltransferasechromosome CDS1814333 933 - 0.503751
ibeB YE0445 probable outer membrane efflux lipoproteinchromosome CDS520018 1407 + 0.511016
lcrD YEP0018 low calcium response locus membrane protein dpYVe8081 CDS14027 2115 - 0.460993
lepA YE1015 putative GTP-binding elongation factorchromosome CDS1134410 1800 + 0.471111
lepB YE1016 signal peptidase Ichromosome CDS1136219 999 + 0.483483
lpxK YE1544 tetraacyldisaccharide 4'-kinasechromosome CDS1734932 987 + 0.521783
malK YE3863 maltose/maltodextrin transport ATP-binding proteinchromosome CDS4215623 1116 - 0.519713
motA YE2579 chemotaxis MotA proteinchromosome CDS2775044 888 - 0.474099
motB YE2578 chemotaxis MotB proteinchromosome CDS2773803 1245 - 0.497189
mrfB YE0780 exported minor pilin proteinchromosome CDS904929 546 + 0.461538
mrfC YE0781 fimbrial outer membrane usher proteinchromosome CDS905480 2562 + 0.492194
mrfD YE0782 pili chaperone proteinchromosome CDS908141 768 + 0.486979
mrpA YE0779 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS904320 525 + 0.47619
msbB YE2386 lipid A biosynthesis acyltransferasechromosome CDS2574322 963 - 0.491173
mttB YE0261 Sec-independent protein translocase protein TatCchromosome CDS300138 780 + 0.425641
mtta2 YE0260 Sec-independent protein translocase protein TatBchromosome CDS299479 657 + 0.503805
myfB YE1453 chaperone proteinchromosome CDS1630111 804 + 0.393035
myfC YE1454 outer membrane usher proteinchromosome CDS1631151 2337 + 0.512195
ogl YE1876 oligogalacturonate lyasechromosome CDS2057802 1167 + 0.476435
outE YE3348 general secretion pathway protein Echromosome CDS3659722 1482 - 0.382591
outF YE3347 general secretion pathway proteinchromosome CDS3658527 1209 - 0.318445
outG YE3346 general secretion pathway protein Gchromosome CDS3658058 450 - 0.331111
outI YE3345 general secretion pathway protein Ichromosome CDS3657658 363 - 0.311295
outL YE3343 general secretion pathway protein Lchromosome CDS3654920 1197 - 0.311612
ppdD YE0690 putative prepilin peptidase dependent protein D precursorchromosome CDS795222 435 - 0.445977
prlG YE0279 preprotein translocase SecE subunitchromosome CDS326041 384 + 0.502604
rcpA YE3636 putative tight adherance operon proteinchromosome CDS3963583 1362 + 0.386197
rcsB YE3227 putative surface-exposed proteinchromosome CDS3520413 1794 - 0.456522
secB YE0080 protein-export proteinchromosome CDS89596 471 + 0.507431
secD YE3164 protein-export membrane protein SecDchromosome CDS3436423 1848 - 0.495671
secF YE3163 protein-export membrane protein SecFchromosome CDS3435444 969 - 0.4871
secG YE0431 protein-export membrane proteinchromosome CDS500254 336 + 0.494048
sohB YE2203 peptidase family U7 proteinchromosome CDS2413957 1047 - 0.475645
sppA YE2260 protease IVchromosome CDS2468716 1851 + 0.481361
tadA YE3638 putative tight adherance operon proteinchromosome CDS3966363 1275 + 0.385882
tatE YE3009 sec-independent protein translocase proteinchromosome CDS3280576 216 - 0.481481
tolB YE2932 TolB colicin import proteinchromosome CDS3187528 1293 - 0.498067
tolQ YE2935 TolQ colicin import proteinchromosome CDS3190638 687 - 0.481805
tolR YE2934 TolR colicin import membrane proteinchromosome CDS3190197 429 - 0.48951
ugpC YE0244 sn-glycerol-3-phosphate transport, ATP-binding proteinchromosome CDS280634 1089 + 0.520661
ybbJ YE3059 hypothetical proteinchromosome CDS3324732 450 + 0.511111
ybeX YE2988 hypothetical proteinchromosome CDS3258563 879 + 0.472127
yidC YE4177 probable membrane proteinchromosome CDS4575640 1647 + 0.487553
yrbC YE3749 hypothetical proteinchromosome CDS4094635 627 - 0.491228
yrbF YE3752 putative ABC transporter ATP-binding proteinchromosome CDS4096636 783 - 0.51341
ysaC YE3548 possible type III secretion system proteinchromosome CDS3865308 1692 - 0.498227
ysaJ YE3553 type III secretion system apparatus lipoproteinchromosome CDS3869882 744 + 0.487903
ysaN YE3544 type III secretion sytem proteinchromosome CDS3860424 1293 - 0.531322
ysaQ YE3542A type III secretion apparatus proteinchromosome CDS3857992 939 - 0.506922
ysaR YE3542 type III secretion apparatus proteinchromosome CDS3857315 675 - 0.462222
ysaS YE3541 type III secretion apparatus proteinchromosome CDS3857030 270 - 0.477778
ysaT YE3540 putative type III secretion apparatus proteinchromosome CDS3856230 801 - 0.475655
ysaU YE3539 putative type III secretion apparatus proteinchromosome CDS3855090 1125 - 0.422222
ysaV YE3546 type III secretion system apparatus proteinchromosome CDS3862139 2073 - 0.428365
yscC YEP0038 putative type III secretion proteinpYVe8081 CDS28087 1824 + 0.45614
yscJ YEP0045 type III secretion lipoproteinpYVe8081 CDS32821 735 + 0.434014
yscL YEP0047 putative type III secretion proteinpYVe8081 CDS34130 672 + 0.44494
yscN YEP0024 probable type III secretion system ATP synthasepYVe8081 CDS18530 1320 + 0.506818
yscQ YEP0027 putative type III secretion proteinpYVe8081 CDS21668 924 + 0.483766
yscR YEP0028 putative type III secretion proteinpYVe8081 CDS22588 654 + 0.428135
yscT YEP0030 putative type III secretion proteinpYVe8081 CDS23506 786 + 0.428753
yscU YEP0031 putative type III secretion proteinpYVe8081 CDS24291 1065 + 0.437559
yspB YE3537 putative type III secretion system effector proteinchromosome CDS3852424 2031 - 0.489906
yspC YE3536 membrane proteinchromosome CDS3851074 1332 - 0.507508
yst1E YE3566 general secretion pathway protein Echromosome CDS3881308 1497 + 0.51169
yst1F YE3567 general secretion pathway protein Fchromosome CDS3882801 1218 + 0.520525
yst1G YE3568 general secretion pathway protein G precursorchromosome CDS3884050 468 + 0.510684
yst1H YE3569 general secretion pathway protein Hchromosome CDS3884517 570 + 0.496491
yst1J YE3570a putative general secretion pathway protein J precursorchromosome CDS3885451 600 + 0.476667
yst1K YE3571 putative general secretion pathway protein Kchromosome CDS3886040 1038 + 0.476879
yst1O YE3574 type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS3888768 786 + 0.479644
 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_1825 outer membrane usher proteinchromosome CDS2046533 2448 + 0.461193
NA YPA_3980 putative outer membrane fimbrial usher proteinchromosome CDS4488504 2379 - 0.461959
NA YPA_1195 flagellar biosynthetic protein FliQchromosome CDS1347497 270 - 0.522222
NA YPA_0457 hypothetical proteinchromosome CDS530274 543 + 0.3407
NA YPA_MT0015 hypothetical proteinpMT CDS19033 747 - 0.535475
NA YPA_3064 putative flagellar hook proteinchromosome CDS3406931 1242 - 0.509662
NA YPA_1846 methyl-accepting chemotaxis proteinchromosome CDS2069569 1674 - 0.480287
NA YPA_1212 hypothetical proteinchromosome CDS1361858 1914 - 0.42999
NA YPA_0140 putative outer membrane usher proteinchromosome CDS168916 2628 - 0.471081
NA YPA_1022 outer membrane usher protein PsaC precursorchromosome CDS1170384 2472 + 0.497168
NA YPA_1862 hypothetical proteinchromosome CDS2096095 1320 + 0.47803
NA YPA_3052 putative flagellinchromosome CDS3394531 1200 - 0.499167
NA YPA_1472 hypothetical proteinchromosome CDS1653285 1206 + 0.494196
NA YPA_1178 flagellar basal-body rod protein FlgFchromosome CDS1328522 630 + 0.579365
NA YPA_3319 putative membrane transport proteinchromosome CDS3661050 1353 - 0.481153
NA YPA_4013 type III secretion system apparatus proteinchromosome CDS4522309 963 - 0.54621
NA YPA_0138 putative chaperone proteinchromosome CDS166748 819 - 0.482295
NA YPA_1202 flagellar protein FliJchromosome CDS1352735 447 - 0.478747
NA YPA_MT0069 F1 capsule anchoring proteinpMT CDS69825 2502 - 0.396083
NA YPA_MT0012 membrane proteinpMT CDS15254 3045 - 0.566174
NA YPA_CD0033 Yop negative regulation/targeting componentpCD CDS27541 921 + 0.431053
NA YPA_4016 putative type III secretion system ATP synthasechromosome CDS4524026 1347 - 0.573868
NA YPA_1201 flagellar hook-length control protein FliKchromosome CDS1351386 1353 - 0.552846
NA YPA_3059 putative flagellar proteinchromosome CDS3403155 294 - 0.503401
NA YPA_1172 negative regulator of flagellin synthesischromosome CDS1324107 303 - 0.475248
NA YPA_2132 putative outer membrane fimbrial usher porinchromosome CDS2388778 1191 - 0.462636
NA YPA_1177 flagellar hook protein FlgEchromosome CDS1327214 1287 + 0.508159
NA YPA_3074 puative flagellar motor switch proteinchromosome CDS3414416 807 - 0.505576
NA YPA_1217 flagellar hook-associated protein 2chromosome CDS1366083 1401 - 0.465382
NA YPA_4134 hypothetical proteinchromosome CDS4654637 1830 - 0.448087
NA YPA_1184 flagellar hook-associated protein 3chromosome CDS1335372 1014 + 0.476331
NA YPA_1298 fimbrial usher proteinchromosome CDS1456846 2592 - 0.494985
NA YPA_1183 flagellar hook-associated protein 1chromosome CDS1333602 1665 + 0.500901
NA YPA_2929 putative type II secretion system proteinchromosome CDS3264025 1137 + 0.452067
NA YPA_3088 hypothetical proteinchromosome CDS3425235 2097 + 0.449213
NA YPA_4135 fimbrial proteinchromosome CDS4656542 558 - 0.460573
NA YPA_CD0022 Yop secretion ATP synthasepCD CDS18250 1320 - 0.508333
NA YPA_4017 secretion system apparatus proteinchromosome CDS4525350 2016 - 0.519841
NA YPA_CD0004 type III secretion proteinpCD CDS3294 633 - 0.450237
NA YPA_1814 putative fimbrial proteinchromosome CDS2033389 543 - 0.425414
NA YPA_2927 putative prepilin peptidase dependent protein D precursorchromosome CDS3261970 465 + 0.447312
NA YPA_3057 putative flagellar hook-associated proteinchromosome CDS3400729 924 - 0.402597
NA YPA_1810 putative chaperone proteinchromosome CDS2027804 804 - 0.482587
NA YPA_2122 putative OmpA family proteinchromosome CDS2379721 837 - 0.481481
NA YPA_0458 general secretion pathway protein Ichromosome CDS530854 345 + 0.342029
NA YPA_1843 protein-glutamate methylesterasechromosome CDS2065681 1050 - 0.530476
NA YPA_1204 flagellar assembly protein FliHchromosome CDS1354698 717 - 0.548117
NA YPA_4133 outer membrane fimbrial usher porinchromosome CDS4654210 402 - 0.482587
NA YPA_3104 hypothetical proteinchromosome CDS3442952 834 + 0.302158
NA YPA_3110 MotA/TolQ/ExbB proton channel family proteinchromosome CDS3447678 1038 - 0.519268
NA YPA_1206 flagellar M-ring proteinchromosome CDS1356396 1713 - 0.532983
NA YPA_1180 flagellar L-ring protein precursorchromosome CDS1329974 690 + 0.521739
NA YPA_0142 putative fimbrial proteinchromosome CDS172366 531 - 0.436911
NA YPA_1812 putative outer membrane usher proteinchromosome CDS2029763 2613 - 0.493685
NA YPA_3020 chemotaxis sensory transducerchromosome CDS3362160 570 - 0.550877
NA YPA_MT0070 F1 chaperone proteinpMT CDS72351 777 - 0.405405
NA YPA_1193 hypothetical proteinchromosome CDS1346323 369 - 0.425474
NA YPA_1203 flagellum-specific ATP synthasechromosome CDS1353281 1521 - 0.549638
NA YPA_0486 hypothetical proteinchromosome CDS561572 570 + 0.461404
NA YPA_3087 putative flagellar assembly proteinchromosome CDS3424115 1134 + 0.446208
NA YPA_1179 flagellar basal-body rod protein FlgGchromosome CDS1329132 699 + 0.516452
NA YPA_3084 putative flagellar assembly proteinchromosome CDS3422291 771 + 0.514916
NA YPA_3072 putative flagellum-specific ATP synthasechromosome CDS3412362 1341 - 0.580164
NA YPA_3067 putative flagellar basal-body rod proteinchromosome CDS3409314 408 - 0.458333
NA YPA_1854 chemotaxis protein CheWchromosome CDS2083833 498 - 0.473896
NA YPA_3094 fimbrial chaperone proteinchromosome CDS3432477 720 - 0.488889
NA YPA_MT0006 phage tail proteinpMT CDS6538 4632 - 0.526554
NA YPA_3058 putative flagellar hook-associated proteinchromosome CDS3401681 1362 - 0.451542
NA YPA_2865 hypothetical proteinchromosome CDS3188896 201 + 0.432836
NA YPA_3078 putative flagellar M-ring proteinchromosome CDS3417390 1641 - 0.502133
NA YPA_3073 putative flagellar assembly proteinchromosome CDS3413695 717 - 0.538354
NA YPA_3066 putative flagellar basal-body rod proteinchromosome CDS3408886 426 - 0.528169
NA YPA_1863 methyl-accepting chemotaxis protein III (MCP-III)chromosome CDS2097368 462 + 0.493506
NA YPA_CD0012 type III secretion proteinpCD CDS8183 1824 - 0.454496
NA YPA_0141 putative fimbrial chaperonechromosome CDS171571 732 - 0.422131
NA YPA_3053 putative flagellinchromosome CDS3396245 1197 - 0.496241
NA YPA_3023 methyl-accepting chemotaxis protein IIchromosome CDS3364654 1338 - 0.479073
NA YPA_0325 hypothetical proteinchromosome CDS385470 1125 + 0.477333
NA YPA_1824 putative chaperone proteinchromosome CDS2045610 753 + 0.446215
NA YPA_1171 flagella synthesis protein FlgNchromosome CDS1323648 441 - 0.487528
NA YPA_1021 chaperone protein PsaB precursorchromosome CDS1169479 822 + 0.377129
NA YPA_3047 putative flagellar hook-length control proteinchromosome CDS3389645 1239 - 0.526231
NA YPA_0943 putative methyl-accepting chemotaxis proteinchromosome CDS1091878 1788 - 0.503915
NA YPA_1207 flagellar hook-basal body complex protein FliEchromosome CDS1358461 312 + 0.496795
NA YPA_1841 chemotaxis protein CheZchromosome CDS2064537 645 - 0.489922
NA YPA_3062 putative flagellar basal-body rod proteinchromosome CDS3405347 786 - 0.522901
NA YPA_3050 putative flagellar hook-associated proteinchromosome CDS3391546 1278 - 0.41784
NA YPA_2134 hypothetical proteinchromosome CDS2391223 1551 - 0.451322
NA YPA_0455 putative general protein secretion proteinchromosome CDS528766 1047 + 0.344795
NA YPA_1164 flagellar biosynthetic protein FlhBchromosome CDS1315519 1161 + 0.525409
NA YPA_1205 flagellar motor switch protein FliGchromosome CDS1355407 993 - 0.521652
NA YPA_2131 fimbrial proteinchromosome CDS2388185 609 - 0.425287
NA YPA_1857 chemotaxis MotA proteinchromosome CDS2087955 888 - 0.48536
NA YPA_3061 putative flagellar L-ring proteinchromosome CDS3404647 666 - 0.53003
NA YPA_3044 putative flagellar motor transmembrane channel proteinchromosome CDS3387553 867 - 0.469435
NA YPA_1166 flagellar biosynthesis/export protein FlhAchromosome CDS1317964 795 + 0.539623
NA YPA_3065 putative basal-body rod modification proteinchromosome CDS3408227 657 - 0.512938
NA YPA_MT0021 hypothetical proteinpMT CDS22456 663 - 0.526395
NA YPA_0226 hypothetical proteinchromosome CDS263086 2334 - 0.479434
NA YPA_1845 hypothetical proteinchromosome CDS2067775 1611 - 0.509001
NA YPA_2321 putative fimbrial biogenesis proteinchromosome CDS2600688 750 - 0.492
NA YPA_3049 putative flagellar proteinchromosome CDS3391156 381 - 0.388451
NA YPA_1165 flagellar biosynthesis protein FlhAchromosome CDS1316679 1323 + 0.510204
NA YPA_1196 flagellar biosynthetic protein FliPchromosome CDS1347872 825 - 0.513939
NA YPA_2136 frimbrial proteinchromosome CDS2393819 546 - 0.443223
NA YPA_1199 flagellar motor switch protein FliMchromosome CDS1349642 1002 - 0.50499
NA YPA_1198 flagellar motor switch protein FliNchromosome CDS1349229 417 - 0.494005
NA YPA_1182 flagellar protein FlgJchromosome CDS1331787 945 + 0.540741
NA YPA_1181 flagellar P-ring protein precursorchromosome CDS1330678 1110 + 0.545946
NA YPA_1621 hypothetical proteinchromosome CDS1813294 600 + 0.373333
NA YPA_3100 putative outer membrane secretin family proteinchromosome CDS3438911 450 + 0.431111
NA YPA_0467 putative methyl-accepting chemotaxis proteinchromosome CDS537161 1692 + 0.450355
NA YPA_3068 putative flagella basal body P-ring formation proteinchromosome CDS3409749 918 + 0.486928
NA YPA_1574 peptidase family U7 proteinchromosome CDS1761156 1032 + 0.485465
NA YPA_0454 general secretion pathway protein Echromosome CDS527263 1362 + 0.389868
NA YPA_1173 flagella basal body P-ring formation protein FlgAchromosome CDS1324560 756 - 0.518519
NA YPA_3979 putative fimbrial chaperonechromosome CDS4487689 744 - 0.435484
NA YPA_3051 putative flagellinchromosome CDS3393043 1206 - 0.497512
NA YPA_3085 putative flagellar assembly proteinchromosome CDS3423063 273 + 0.450549
NA YPA_4131 putative fimbrial chaperonechromosome CDS4653116 768 - 0.427083
NA YPA_3083 flagellar switch proteinchromosome CDS3421881 414 + 0.444444
NA YPA_1844 chemotaxis protein methyltransferasechromosome CDS2066730 888 - 0.502252
NA YPA_3043 putative chemotaxis membrane proteinchromosome CDS3386642 912 - 0.472588
NA YPA_1300 fimbrial proteinchromosome CDS1460220 531 - 0.485876
NA YPA_1175 flagellar basal-body rod protein FlgCchromosome CDS1325916 405 + 0.540741
NA YPA_3077 puative flagellar motor switch proteinchromosome CDS3417092 327 - 0.486239
NA YPA_1811 putative fimbrial proteinchromosome CDS2028732 1035 - 0.464734
NA YPA_1218 thermoregulated motility proteinchromosome CDS1367780 1110 + 0.468468
NA YPA_2135 putative pili chaperone proteinchromosome CDS2392901 762 - 0.412073
NA YPA_3095 outer membrane usher proteinchromosome CDS3433214 2481 - 0.503023
NA YPA_0463 prepilin peptidasechromosome CDS534410 843 + 0.358244
NA YPA_4027 type III secretion proteinchromosome CDS4532600 1518 - 0.437418
NA YPA_1197 flagellar protein FliOchromosome CDS1348693 537 - 0.577281
NA YPA_1813 putative chaperone proteinchromosome CDS2032457 780 - 0.441026
NA YPA_2326 putative autotransporter proteinchromosome CDS2606940 4377 + 0.492803
NA YPA_3581 putative OmpA-family membrane proteinchromosome CDS4010348 1611 - 0.515208
NA YPA_1176 basal-body rod modification protein FlgDchromosome CDS1326335 678 + 0.529499
NA YPA_1174 flagellar basal-body rod protein FlgBchromosome CDS1325497 414 + 0.502415
NA YPA_2998 hypothetical proteinchromosome CDS3337300 315 + 0.520635
NA YPA_1216 flagellar protein FliSchromosome CDS1365674 399 - 0.466165
NA YPA_3063 hypothetical proteinchromosome CDS3406200 732 - 0.554645
NA YPA_0208 cell division proteinchromosome CDS245934 1617 + 0.48423
NA YPA_3060 putative flagellar P-ring proteinchromosome CDS3403458 1176 - 0.542517
NA YPA_2928 putative type II secretion system proteinchromosome CDS3262409 1557 + 0.460501
NA YPA_1194 flagellar biosynthetic protein FliRchromosome CDS1346712 855 - 0.497076
NA YPA_0456 general secretion pathway protein Gchromosome CDS529832 438 + 0.394977
NA YPA_3079 putative flagellar hook-basal body complex proteinchromosome CDS3419040 381 - 0.514436
NA YPA_1856 chemotaxis MotB proteinchromosome CDS2086675 1284 - 0.490654
NA YPA_3086 putative flagellar assembly proteinchromosome CDS3423342 774 + 0.47416
NA YPA_3468 hypothetical proteinchromosome CDS3874191 489 - 0.466258
NA YPA_2084 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS2337767 531 - 0.463277
NA YPA_CD0019 type III secretion proteinpCD CDS15502 924 - 0.481602
NA YPA_0023 hemolysin activator proteinchromosome CDS36583 1500 - 0.474667
NA YPA_1855 chemotaxis protein CheAchromosome CDS2084493 2166 - 0.501385
NA YPA_1296 pili assembly chaperonechromosome CDS1454744 741 - 0.442645
NA YPA_0453 general secretion pathway protein Dchromosome CDS525194 1923 + 0.333333
 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO2940 fimbrial proteinchromosome CDS3282765 555 - 0.430631
NA YPO2881 putative fimbrial biogenesis proteinchromosome CDS3217115 750 - 0.492
NA YPO0815 general secretion pathway protein Echromosome CDS892176 1512 - 0.39418
NA YPO1707 putative fimbrial proteinchromosome CDS1948363 543 + 0.425414
NA YPO0514 hypothetical proteinchromosome CDS551203 1611 + 0.515208
NA YPO0267 flagellum-specific ATP synthasechromosome CDS267483 1338 + 0.575486
NA YPO1697 putative chaperone proteinchromosome CDS1935923 753 - 0.446215
NA YPO2110 hypothetical proteinchromosome CDS2381325 1206 + 0.494196
NA YPO3798 hypothetical proteinchromosome CDS4264085 2334 + 0.479434
NA YPO3881 putative chaperone proteinchromosome CDS4357952 747 + 0.481928
NA YPO1711 putative chaperone proteinchromosome CDS1953688 804 + 0.482587
NA YPO3879 putative outer membrane usher proteinchromosome CDS4353903 2628 + 0.471081
NA YPO1710 putative fimbrial proteinchromosome CDS1952528 1164 + 0.46134
NA YPO0940 hypothetical proteinchromosome CDS1031548 1077 - 0.481894
NA YPO2759 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS3092975 531 + 0.463277
NA YPO1696 probable outer membrane usher proteinchromosome CDS1933288 2448 - 0.461193
NA YPO0688 hypothetical proteinchromosome CDS749629 834 - 0.302158
NA YPO2723 putative OmpA family proteinchromosome CDS3050889 786 + 0.482188
NA YPO0302 putative outer membrane fimbrial usher proteinchromosome CDS302675 2379 + 0.461959
NA YPO0816 general secretion pathway protein Dchromosome CDS893684 1923 - 0.332813
NA YPO0303 putative fimbrial chaperonechromosome CDS305125 744 + 0.435484
NA YPO0743 putative flagellar hook-length control proteinchromosome CDS802014 1182 + 0.521997
NA YPO0257 possible type III secretion proteinchromosome CDS258675 1572 + 0.43257
NA YPMT1.20c hypothetical proteinpMT1 CDS22454 663 - 0.526395
NA YPO1708 putative chaperone proteinchromosome CDS1949058 780 + 0.441026
NA YPO3878 putative fimbrial chaperonechromosome CDS4353144 732 + 0.422131
NA YPO0698 outer membrane usher proteinchromosome CDS758430 2481 + 0.503426
NA YPMT1.14c hypothetical proteinpMT1 CDS19031 747 - 0.535475
NA YPO4041 putative fimbrial chaperonechromosome CDS4557884 768 - 0.427083
NA YPO1918 probable pili assembly chaperonechromosome CDS2171665 741 - 0.442645
NA YPO1920 probable fimbrial usher proteinchromosome CDS2173767 2592 - 0.494985
NA YPO0812 general secretion pathway protein Hchromosome CDS889984 543 - 0.3407
NA YPO0811 general secretion pathway protein Ichromosome CDS889602 345 - 0.342029
NA YPO3877 putative fimbrial proteinchromosome CDS4352550 531 + 0.436911
NA YPO1709 putative outer membrane usher proteinchromosome CDS1949919 2613 + 0.493685
NA YPO1818 hypothetical proteinchromosome CDS2065236 369 - 0.425474
NA YPO2280 putative phage-related secreted proteinchromosome CDS2560790 1245 + 0.452209
NA YPO0813 general secretion pathway protein Gchromosome CDS890531 438 - 0.394977
NA YPO2945 frimbrial proteinchromosome CDS3288399 546 - 0.443223
NA YPO0806 prepilin peptidasechromosome CDS885548 843 - 0.358244
NA YPO0699 fimbrial chaperone proteinchromosome CDS760928 720 + 0.488889
NA YPO0146 hypothetical proteinchromosome CDS161063 942 + 0.514862
NA YPO2944 putative pili chaperone proteinchromosome CDS3287481 780 - 0.411538
NA YPO1921 probable pili assembly chaperonechromosome CDS2176407 645 - 0.424806
NA YPO2261 hypothetical proteinchromosome CDS2541334 600 + 0.373333
NA YPO0269 type III secretion proteinchromosome CDS269617 921 + 0.543974
NA YPO1922 fimbrial proteinchromosome CDS2177144 531 - 0.485876
NA YPO4044 fimbrial proteinchromosome CDS4561310 558 - 0.460573
caf1A YPMT1.83 putative F1 capsule anchoring proteinpMT1 CDS83368 2502 + 0.396083
caf1M YPMT1.82 putative F1 chaperone proteinpMT1 CDS82567 777 + 0.405405
cheA YPO1666 chemotaxis protein CheAchromosome CDS1895739 2172 + 0.501842
cheB YPO1679 chemotaxis-specific methylesterasechromosome CDS1915533 1050 + 0.530476
cheD YPO1675 methyl-accepting chemotaxis proteinchromosome CDS1911021 1674 + 0.480287
cheD YPO0802 putative methyl-accepting chemotaxis proteinchromosome CDS881947 1644 - 0.456204
cheR YPO1678 chemotaxis protein methyltransferasechromosome CDS1914661 873 + 0.505155
cheW YPO1667 chemotaxis protein CheWchromosome CDS1898073 498 + 0.473896
cheZ YPO1681 chemotaxis protein CheZchromosome CDS1917082 645 + 0.489922
cpxP YPO0075 hypothetical proteinchromosome CDS84482 489 + 0.466258
flaA1 YPO0737 putative flagellinchromosome CDS795381 1215 + 0.498765
flaA2 YPO0738 putative flagellinchromosome CDS797110 1200 + 0.499167
flaA3 YPO0739 putative flagellinchromosome CDS798592 1206 + 0.497512
flgA YPO0721 flagellar basal body P-ring biosynthesis proteinchromosome CDS781445 714 - 0.512605
flgA YPO1798 flagellar basal body P-ring biosynthesis proteinchromosome CDS2043452 699 - 0.520744
flgB YPO1799 flagellar basal body rod proteinchromosome CDS2044389 414 + 0.502415
flgB YPO0722 flagellar basal body rod proteinchromosome CDS782351 447 + 0.463087
flgC YPO0723 flagellar basal body rod proteinchromosome CDS782800 426 + 0.528169
flgC YPO1800 flagellar basal body rod proteinchromosome CDS2044808 405 + 0.540741
flgD YPO1801 basal-body rod modification protein FlgDchromosome CDS2045227 678 + 0.529499
flgD YPO0724 flagellar basal body rod modification proteinchromosome CDS783228 657 + 0.512938
flgE YPO1802 flagellar hook proteinchromosome CDS2046106 1287 + 0.508159
flgE YPO0725 flagellar hook proteinchromosome CDS783939 1242 + 0.509662
flgF YPO1803 flagellar basal-body rod protein FlgFchromosome CDS2047414 630 + 0.579365
flgG YPO1804 flagellar basal-body rod protein FlgGchromosome CDS2048024 699 + 0.516452
flgG YPO0728 putative flagellar basal-body rod proteinchromosome CDS786690 786 + 0.522901
flgH YPO1805 flagellar L-ring protein precursorchromosome CDS2048866 690 + 0.521739
flgH YPO0729 flagellar L-ring protein precursorchromosome CDS787510 666 + 0.53003
flgI YPO1806 flagellar P-ring protein precursorchromosome CDS2049570 1110 + 0.545946
flgI YPO0730 flagellar P-ring protein precursorchromosome CDS788252 1113 + 0.549865
flgJ YPO0731 putative flagellar proteinchromosome CDS789374 294 + 0.503401
flgJ YPO1807 flagellar biosynthesis proteinchromosome CDS2050679 945 + 0.540741
flgK YPO0732 flagellar hook-associated proteinchromosome CDS789780 1362 + 0.451542
flgK YPO1808 flagellar hook-associated proteinchromosome CDS2052494 1665 + 0.500901
flgL YPO0733 flagellar hook-associated proteinchromosome CDS791170 924 + 0.402597
flgL YPO1809 flagellar hook-associated proteinchromosome CDS2054297 981 + 0.479103
flgM YPO1797 negative regulator of flagellin synthesischromosome CDS2042999 303 - 0.475248
flgN YPO1796 flagella synthesis protein FlgNchromosome CDS2042540 441 - 0.487528
flhA YPO1791 flagellar biosynthesis proteinchromosome CDS2035572 2079 + 0.518037
flhB YPO1790 flagellar biosynthesis proteinchromosome CDS2034412 1161 + 0.525409
flhB YPO0706 flagellar biosynthesis proteinchromosome CDS768877 1134 - 0.446208
fliC YPO1842 flagellinchromosome CDS2086661 1110 + 0.468468
fliD YPO1841 flagellar hook-associated proteinchromosome CDS2084964 1401 - 0.465382
fliD YPO0740 putative flagellar hook-associated proteinchromosome CDS800017 1278 + 0.41784
fliE YPO1831 flagellar basal body proteinchromosome CDS2077374 312 + 0.496795
fliE YPO0713 putative flagellar hook-basal body complex proteinchromosome CDS774704 381 + 0.514436
fliF YPO0714 flagellar M-ring proteinchromosome CDS775094 1641 + 0.502133
fliF YPO1830 flagellar M-ring proteinchromosome CDS2075309 1713 - 0.532983
fliG YPO1829 flagellar motor proteinchromosome CDS2074320 993 - 0.521652
fliG YPO0715 flagellar motor proteinchromosome CDS776775 975 + 0.506667
fliH YPO1828 flagellar assembly proteinchromosome CDS2073611 717 - 0.548117
fliH YPO0716 flagellar assembly proteinchromosome CDS777751 720 + 0.538889
fliI YPO1827 flagellum-specific ATP synthasechromosome CDS2072194 1455 - 0.547079
fliI YPO0717 flagellum-specific ATP synthasechromosome CDS778463 1341 + 0.580164
fliJ YPO1826 flagellar proteinchromosome CDS2071648 447 - 0.478747
fliK YPO1825 flagellar hook-length control protein FliKchromosome CDS2070299 1353 - 0.552846
fliL YPO1824 flagellar biosynthesis proteinchromosome CDS2069562 471 - 0.47983
fliM YPO0711 putative flagellar motor switch proteinchromosome CDS772237 912 - 0.375
fliM YPO1823 flagellar motor switch proteinchromosome CDS2068555 1002 - 0.50499
fliN YPO1822 flagellar motor switch proteinchromosome CDS2068142 417 - 0.494005
fliN YPO0710 flagellar switch proteinchromosome CDS771831 414 - 0.444444
fliO YPO1821 flagellar protein FliOchromosome CDS2067606 369 - 0.569106
fliP YPO1820 flagellar biosynthesis proteinchromosome CDS2066785 741 - 0.51417
fliP YPO0709 putative flagellar assembly proteinchromosome CDS771064 771 - 0.514916
fliQ YPO1820a flagellar biosynthesis proteinchromosome CDS2066410 270 - 0.522222
fliQ YPO0708 putative flagellar assembly proteinchromosome CDS770790 270 - 0.451852
fliR YPO0707 putative flagellar assembly proteinchromosome CDS770010 774 - 0.47416
fliR YPO1819 flagellar biosynthesis proteinchromosome CDS2065625 783 - 0.496807
fliS YPO1840 flagellar protein FliSchromosome CDS2084555 399 - 0.466165
fliS YPO0741 putative flagellar proteinchromosome CDS801304 381 + 0.388451
hofB YPO3426 putative type II secretion system proteinchromosome CDS3829978 1539 + 0.460689
hofC YPO3427 putative type II secretion system proteinchromosome CDS3831513 1200 + 0.455
motA YPO1664 flagellar motor proteinchromosome CDS1893561 888 + 0.48536
motA YPO0746 flagellar motor proteinchromosome CDS804421 867 + 0.469435
motB YPO1665 flagellar motor proteinchromosome CDS1894445 1284 + 0.490654
motB YPO0747 flagellar motor proteinchromosome CDS805287 912 + 0.472588
ppdD YPO3425 putative prepilin peptidase dependent protein D precursorchromosome CDS3829521 465 + 0.447312
psaB YPO1304 chaperone protein PsaB precursorchromosome CDS1463379 822 + 0.377129
psaC YPO1305 outer membrane usher protein PsaC precursorchromosome CDS1464242 2514 + 0.492045
tar YPO4062 methyl-accepting chemotaxis protein IIchromosome CDS4581134 1950 + 0.492308
tsr2 YPO1229 putative methyl-accepting chemotaxis proteinchromosome CDS1389173 1788 - 0.503915
yapA YPO2886 putative autotransporter proteinchromosome CDS3223437 4293 + 0.494526
yopD YPCD1.28c secreted effector proteinpCD1 CDS19294 921 - 0.431053
yscC YPCD1.52 outer membrane secretin precursorpCD1 CDS37749 1824 + 0.454496
yscL YPCD1.61 type III secretion proteinpCD1 CDS43796 666 + 0.448949
yscN YPCD1.40 type III secretion system ATPasepCD1 CDS28186 1320 + 0.508333
yscQ YPCD1.43 type III secretion proteinpCD1 CDS31330 924 + 0.481602
 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y2471 hypothetical proteinchromosome CDS2734175 1914 + 0.429467
NA y1858 hypothetical proteinchromosome CDS2048629 2448 - 0.461193
NA y0563 hypothetical proteinchromosome CDS631245 744 + 0.435484
NA y3462 flagellar assembly proteinchromosome CDS3844754 744 - 0.537634
NA y0514 secretinchromosome CDS585508 1572 + 0.43257
NA y3195 type IV prepilin peptidasechromosome CDS3515572 915 - 0.357377
NA Y1035 hypothetical proteinpMT-1 CDS25221 663 + 0.526395
NA y3479 chaperonechromosome CDS3861595 720 - 0.488889
NA y3190 methyl-accepting chemotaxis proteinchromosome CDS3511963 1701 - 0.449735
NA y0066 solute-binding periplasmic protein of ABC transpoterchromosome CDS76410 489 - 0.466258
NA y2389 pilin chaperonechromosome CDS2639747 645 + 0.424806
NA y0351 chaperonechromosome CDS391813 756 - 0.42328
NA y0432 hypothetical proteinchromosome CDS479296 2349 - 0.479353
NA y3925 hypothetical proteinchromosome CDS4384144 942 + 0.514862
NA y2489 hypothetical proteinchromosome CDS2751255 369 + 0.425474
NA y2958 methyl-accepting chemotaxis transmembrane proteinchromosome CDS3256754 1815 + 0.501377
NA y4061 outer membrane usher proteinchromosome CDS4505531 636 - 0.490566
NA y2392 pilin chaperonechromosome CDS2644393 741 + 0.442645
NA y3468 hypothetical proteinchromosome CDS3850980 414 + 0.444444
NA y1544 fimbrial proteinchromosome CDS1711336 609 + 0.425287
NA y2390 outer membrane usher proteinchromosome CDS2640440 2592 + 0.494985
NA y3463 flagellar motor proteinchromosome CDS3845475 1044 - 0.503831
NA y3170 hypothetical proteinchromosome CDS3488692 570 - 0.461404
NA y3659 hypothetical proteinchromosome CDS4065790 1638 - 0.517094
NA Y1041 hypothetical proteinpMT-1 CDS28560 747 + 0.535475
NA y3489 hypothetical proteinchromosome CDS3872070 834 + 0.302158
NA y0529 type III secretion proteinchromosome CDS596406 963 + 0.54621
NA y1872 fimbrial componenetchromosome CDS2067827 1170 + 0.460684
NA y2103 hypothetical proteinchromosome CDS2317722 600 + 0.373333
NA y3447 hypothetical proteinchromosome CDS3834214 294 - 0.503401
NA y0562 hypothetical proteinchromosome CDS628795 2379 + 0.461959
NA y1869 fimbrial proteinchromosome CDS2063668 543 + 0.425414
NA y2205 hypothetical proteinchromosome CDS2436953 1206 - 0.494196
NA y0352 fimbrial protein (precursor)chromosome CDS392608 531 - 0.436911
NA y1859 pilus assembly chaperonechromosome CDS2051247 753 - 0.446215
NA y4063 fimbrial-like proteinchromosome CDS4508097 645 - 0.427907
NA y3200 hypothetical proteinchromosome CDS3520008 591 - 0.338409
NA y2465 flagellinchromosome CDS2729057 1110 - 0.468468
NA y4060 chaperonechromosome CDS4504671 828 - 0.426329
NA y3326 protein transportchromosome CDS3659626 1131 - 0.476569
NA y1871 usher proteinchromosome CDS2065224 2613 + 0.493685
NA Y1099 F1 capsulepMT-1 CDS79152 2502 + 0.396083
NA y1539 fimbrial proteinchromosome CDS1705756 555 + 0.443243
NA y3441 lateral flagellinchromosome CDS3827295 1206 - 0.497512
NA y3467 hypothetical proteinchromosome CDS3850088 900 + 0.375556
NA y3204 general secretion proteinchromosome CDS3523708 1923 - 0.333333
NA y2388 fimbrial precursorchromosome CDS2639085 570 + 0.473684
NA y1351 fimbrial biogenesis proteinchromosome CDS1502195 750 + 0.492
NA y3470 hypothetical proteinchromosome CDS3852162 273 + 0.450549
NA y4062 hypothetical proteinchromosome CDS4506192 1830 - 0.448087
NA y3465 hypothetical proteinchromosome CDS3848140 381 - 0.514436
NA y3445 flagellar hook-associated proteinchromosome CDS3831788 927 - 0.402373
NA y3203 general secretion proteinchromosome CDS3522200 1512 - 0.39418
NA y1873 pilin chaperonechromosome CDS2068993 804 + 0.482587
HAP1 y3446 flagellar hook-associated proteinchromosome CDS3832740 1362 - 0.451542
caf1M Y1098 F1 capsulepMT-1 CDS78351 777 + 0.405405
cheA y1827 sensory transducer kinasechromosome CDS2011055 2172 + 0.501842
cheB y1841 chemotaxis-specific methylesterasechromosome CDS2030847 1053 + 0.530864
cheR y1839 protein glutamate methyltransferasechromosome CDS2029963 888 + 0.502252
cheW y1828 positive regulator of CheA protein activitychromosome CDS2013389 498 + 0.473896
cheZ y1843 chemotactic response; CheY protein phophatasechromosome CDS2032399 645 + 0.489922
ecpD y1541 pilin chaperonechromosome CDS1706449 780 + 0.411538
ecpD y1870 pilin chaperonechromosome CDS2064363 780 + 0.441026
fimD y0350 outer membrane usher protein FIMD precursorchromosome CDS389158 2628 - 0.471081
flgA y2511 flagellar basal body P-ring biosynthesis proteinchromosome CDS2772500 765 + 0.517647
flgB y2510 flagellar basal body rod proteinchromosome CDS2771914 414 - 0.502415
flgC y3455 flagellar basal body rod proteinchromosome CDS3839945 426 - 0.528169
flgC y2509 flagellar basal body rod proteinchromosome CDS2771504 405 - 0.540741
flgD y2508 basal-body rod modification proteinchromosome CDS2770812 678 - 0.529499
flgE y3452 flagellar hook proteinchromosome CDS3837990 1242 - 0.509662
flgE y2507 flagellar hook proteinchromosome CDS2769324 1287 - 0.508159
flgF y3451 flagellar rod proteinchromosome CDS3837259 732 - 0.554645
flgF y2506 cell-proximal portion of basal-body rod proteinchromosome CDS2768673 630 - 0.579365
flgG y2505 cell-distal portion of basal-body rodchromosome CDS2767994 699 - 0.516452
flgG y3450 flagellar biosynthesis protein, cell-distal portion of basal-body rodchromosome CDS3836406 786 - 0.522901
flgH y3449 flagellar L-ring protein precursorchromosome CDS3835706 666 - 0.53003
flgH y2504 flagellar L-ring protein precursorchromosome CDS2767161 732 - 0.52459
flgI y2503 flagellar P-ring protein precursorchromosome CDS2766037 1110 - 0.545946
flgI y3448 flagellar P-ring protein precursorchromosome CDS3834517 1176 - 0.542517
flgJ y2502 flagellar biosynthesis proteinchromosome CDS2765093 945 - 0.540741
flgK y2501 flagellar hook-associated proteinchromosome CDS2762701 1665 - 0.500901
flgL y2499 flagellar hook-associated proteinchromosome CDS2761582 1014 - 0.476331
flgM y2513 anti-FliA factorchromosome CDS2773415 303 + 0.475248
flgN y2514 flagellar biosynthesis proteinchromosome CDS2773733 444 + 0.488739
flhA y2518 flagellar biosynthesis proteinchromosome CDS2779066 2079 - 0.518037
flhB y3472 flagellar biosynthesis proteinchromosome CDS3853214 1134 + 0.446208
flhB y2519 flagellar biosynthesis proteinchromosome CDS2781144 1161 - 0.525409
fliD y2466 flagellar hook-associated proteinchromosome CDS2730463 1401 + 0.465382
fliE y2475 flagellar basal body proteinchromosome CDS2739174 318 - 0.493711
fliF y3464 flagellar M-ring proteinchromosome CDS3846490 1641 - 0.502133
fliF y2476 flagellar M-ring proteinchromosome CDS2739838 1713 + 0.532983
fliG y2477 flagellar motor proteinchromosome CDS2741547 993 + 0.521652
fliH y2478 flagellar assembly proteinchromosome CDS2742511 738 + 0.550135
fliI y0526 flagellum-specific ATP synthasechromosome CDS594314 1338 + 0.575486
fliI y2479 flagellum-specific ATP synthasechromosome CDS2743187 1479 + 0.54902
fliI y3461 flagellum-specific ATP synthasechromosome CDS3843421 1341 - 0.580164
fliJ y2480 flagellar proteinchromosome CDS2744765 447 + 0.478747
fliK y2481 flagellar hook-length control proteinchromosome CDS2745208 1353 + 0.552846
fliL y2482 flagellar biosynthesis proteinchromosome CDS2746728 570 + 0.484211
fliM y2483 flagellar motor switch proteinchromosome CDS2747303 1002 + 0.50499
fliN y2484 flagellar motor switch proteinchromosome CDS2748301 417 + 0.494005
fliO y2485 flagellar biosynthesis proteinchromosome CDS2748717 537 + 0.577281
fliP y2486 flagellar biosynthesis proteinchromosome CDS2749250 825 + 0.513939
fliP y3469 flagellar biosynthesis proteinchromosome CDS3851390 771 + 0.514916
fliQ y2487 flagellar biosynthesis proteinchromosome CDS2750180 270 + 0.522222
fliR y3471 flagellar biosynthetic proteinchromosome CDS3852435 780 + 0.475641
fliR y2488 flagellar biosynthesis proteinchromosome CDS2750452 783 + 0.496807
fliS y2467 flagellar protein FliSchromosome CDS2731874 399 + 0.466165
hofB y0760 integral membrane proteinchromosome CDS847025 1557 - 0.460501
hofC y0759 integral membrane proteinchromosome CDS845829 1200 - 0.455
hofF y3202 general protein secretion proteinchromosome CDS3521012 1047 - 0.344795
hofG y3201 general protein secretion proteinchromosome CDS3520555 438 - 0.394977
lfgA y3457 flagellar basal body P-ring biosynthesis proteinchromosome CDS3840808 918 + 0.486928
lfgB y3456 flagellar basal body rod proteinchromosome CDS3840373 447 - 0.463087
lfgD y3453 flagellar basal body rod modification proteinchromosome CDS3839286 657 - 0.512938
motA y1823 flagellar motor proteinchromosome CDS2008877 888 + 0.48536
motB y1826 flagellar motor proteinchromosome CDS2009761 1284 + 0.490654
papC y3480 outer membrane usher proteinchromosome CDS3862332 2481 - 0.503023
papD y0348 pilus chaperonechromosome CDS386990 819 - 0.482295
ppdD y0761 prelipin peptidase dependent proteinchromosome CDS848556 465 - 0.447312
psaB y2881 pH 6 Antigen chaperone proteinchromosome CDS3183531 822 - 0.377129
psaC y2880 outer membrane usher proteinchromosome CDS3180976 2514 - 0.492045
smfA y1593 fimbrial A protein precursorchromosome CDS1761515 531 + 0.463277
tap y1838 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2028195 1611 + 0.509001
tsr y1837 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS2026338 1674 + 0.480287
tsr y4081 methyl-accepting chemotaxis protein IIchromosome CDS4527920 1950 + 0.492308
yapA y1346 autotransporterchromosome CDS1492316 4377 - 0.492803
 
Yersinia pestis Nepal516, Nepal516
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPN_2675 chaperone protein PsaB precursorchromosome CDS3019547 822 - 0.377129
NA YPN_2300 flagellar motor switch protein FliMchromosome CDS2582430 1002 + 0.50499
NA YPN_0166 hypothetical proteinchromosome CDS207278 2334 - 0.479434
NA YPN_1965 chemotaxis MotB proteinchromosome CDS2223041 1284 - 0.490654
NA YPN_1252 autotransporter proteinchromosome CDS1422220 4377 - 0.492803
NA YPN_1257 fimbrial biogenesis proteinchromosome CDS1432099 750 + 0.492
NA YPN_1582 hypothetical proteinchromosome CDS1789937 1206 + 0.494196
NA YPN_0583 flagellar hook proteinchromosome CDS692856 1242 + 0.509662
NA YPN_0581 flagellar basal-body rod proteinchromosome CDS691717 426 + 0.528169
NA YPN_0567 flagellar assembly proteinchromosome CDS679927 771 - 0.514916
NA YPN_3709 methyl-accepting chemotaxis protein IIchromosome CDS4256712 1950 + 0.492308
NA YPN_3402 secretion system apparatus proteinchromosome CDS3877418 1047 - 0.51767
NA YPN_1953 chemotaxis protein methyltransferasechromosome CDS2203236 888 - 0.502252
NA YPN_2287 hypothetical proteinchromosome CDS2569302 1914 + 0.429467
NA YPN_1919 chaperone proteinchromosome CDS2164257 804 - 0.482587
NA YPN_1955 methyl-accepting chemotaxis proteinchromosome CDS2206075 1674 - 0.480287
NA YPN_1437 hypothetical proteinchromosome CDS1637279 1551 + 0.451322
NA YPN_0589 flagellar hook-associated proteinchromosome CDS697986 1362 + 0.451542
NA YPN_2187 mannose-resistant/Proteus-like fimbrial proteinchromosome CDS2471947 531 - 0.463277
NA YPN_0087 fimbrial proteinchromosome CDS120630 531 - 0.436911
NA YPN_0540 ExbD/TolR-family transport proteinchromosome CDS655283 426 + 0.483568
NA YPN_2674 outer membrane usher protein PsaC precursorchromosome CDS3016992 2472 - 0.497168
NA YPN_0587 flagellar P-ring proteinchromosome CDS696395 1176 + 0.542517
NA YPN_0588 flagellar proteinchromosome CDS697580 294 + 0.503401
NA YPN_1950 chemotaxis protein CheZchromosome CDS2201043 645 - 0.489922
NA YPN_2326 flagella basal body P-ring formation protein FlgAchromosome CDS2607779 756 + 0.518519
NA YPN_2295 flagellar assembly protein FliHchromosome CDS2577659 717 + 0.546722
NA YPN_0569 flagellar motor switch proteinchromosome CDS681100 900 - 0.375556
NA YPN_1972 methyl-accepting chemotaxis protein III (MCP-III)chromosome CDS2233734 462 + 0.493506
NA YPN_1966 chemotaxis MotA proteinchromosome CDS2224321 888 - 0.48536
NA YPN_2321 flagellar basal-body rod protein FlgFchromosome CDS2603943 630 - 0.579365
NA YPN_3364 fimbrial chaperonechromosome CDS3839757 744 - 0.435484
NA YPN_2749 methyl-accepting chemotaxis proteinchromosome CDS3092770 1788 + 0.503915
NA YPN_2316 flagellar hook-associated protein 1chromosome CDS2597828 1665 - 0.500901
NA YPN_0575 flagellum-specific ATP synthasechromosome CDS687326 1341 + 0.580164
NA YPN_2987 hypothetical proteinchromosome CDS3356511 570 - 0.461404
NA YPN_0020 hemolysin activator proteinchromosome CDS34620 1500 - 0.474667
NA YPN_MT0014 hypothetical proteinpMT CDS19031 747 - 0.535475
NA YPN_2320 flagellar basal-body rod protein FlgGchromosome CDS2603264 699 - 0.516452
NA YPN_3020 general secretion pathway protein Dchromosome CDS3391546 1923 - 0.333333
NA YPN_0562 flagellar biosynthesis/export membrane protein flhA, fhiAchromosome CDS675656 834 - 0.443645
NA YPN_2306 hypothetical proteinchromosome CDS2586382 369 + 0.425474
NA YPN_3689 outer membrane fimbrial usher porinchromosome CDS4234330 636 - 0.490566
NA YPN_0586 flagellar L-ring proteinchromosome CDS695716 666 + 0.53003
NA YPN_0580 flagellar basal-body rod proteinchromosome CDS691307 408 + 0.458333
NA YPN_0574 flagellar assembly proteinchromosome CDS686617 717 + 0.538354
NA YPN_0566 flagellar assembly proteinchromosome CDS679653 273 - 0.450549
NA YPN_0582 basal-body rod modification proteinchromosome CDS692145 657 + 0.512938
NA YPN_2303 flagellar biosynthetic protein FliPchromosome CDS2584377 825 + 0.513939
NA YPN_2305 flagellar biosynthetic protein FliRchromosome CDS2585579 783 + 0.496807
NA YPN_2293 flagellar M-ring proteinchromosome CDS2574965 1713 + 0.532983
NA YPN_2334 flagellar biosynthetic protein FlhBchromosome CDS2616414 1161 - 0.525409
NA YPN_3365 outer membrane fimbrial usher proteinchromosome CDS3840572 2379 - 0.461959
NA YPN_2318 flagellar P-ring protein precursorchromosome CDS2601307 1110 - 0.546847
NA YPN_0545 hypothetical proteinchromosome CDS659167 834 - 0.302158
NA YPN_1920 fimbrial proteinchromosome CDS2165057 1164 - 0.46134
NA YPN_0579 flagella basal body P-ring formation proteinchromosome CDS690362 918 - 0.486928
NA YPN_2296 flagellum-specific ATP synthasechromosome CDS2578272 1521 + 0.548981
NA YPN_0389 OmpA-family membrane proteinchromosome CDS470406 1611 + 0.515208
NA YPN_0725 hypothetical proteinchromosome CDS850934 201 - 0.432836
NA YPN_0662 type II secretion system proteinchromosome CDS775961 1557 - 0.459859
NA YPN_3398 type III secretion system apparatus proteinchromosome CDS3874377 963 - 0.54621
NA YPN_3015 general secretion pathway protein Ichromosome CDS3387464 345 - 0.342029
NA YPN_3137 hypothetical proteinchromosome CDS3527453 1125 - 0.478222
NA YPN_0585 flagellar basal-body rod proteinchromosome CDS694896 786 + 0.522901
NA YPN_2224 OmpA family proteinchromosome CDS2513745 837 - 0.481481
NA YPN_3412 type III secretion proteinchromosome CDS3884669 1518 - 0.437418
NA YPN_2327 negative regulator of flagellin synthesischromosome CDS2608685 303 + 0.475248
NA YPN_3016 general secretion pathway protein Hchromosome CDS3387846 591 - 0.338409
NA YPN_2319 flagellar L-ring protein precursorchromosome CDS2602431 690 - 0.521739
NA YPN_0573 puative flagellar motor switch proteinchromosome CDS685569 1044 + 0.503831
NA YPN_1440 outer membrane fimbrial usher porinchromosome CDS1640083 1191 + 0.462636
NA YPN_2328 flagella synthesis protein FlgNchromosome CDS2609006 441 + 0.487528
NA YPN_1921 outer membrane usher proteinchromosome CDS2166217 2613 - 0.493303
NA YPN_0661 type II secretion system proteinchromosome CDS774765 1137 - 0.452067
NA YPN_2304 flagellar biosynthetic protein FliQchromosome CDS2585307 270 + 0.522222
NA YPN_2322 flagellar hook protein FlgEchromosome CDS2604594 1287 - 0.508159
NA YPN_3401 type III secretion system ATP synthasechromosome CDS3876094 1347 - 0.573868
NA YPN_3688 fimbrial chaperonechromosome CDS4233470 768 - 0.427083
NA YPN_1952 protein-glutamate methylesterasechromosome CDS2202187 1050 - 0.530476
NA YPN_0563 hypothetical proteinchromosome CDS676452 1302 - 0.457757
NA YPN_0590 flagellar hook-associated proteinchromosome CDS699376 924 + 0.402597
NA YPN_1923 fimbrial proteinchromosome CDS2169843 543 - 0.425414
NA YPN_MT0066 F1 chaperone proteinpMT CDS70128 777 - 0.405405
NA YPN_2298 flagellar hook-length control protein FliKchromosome CDS2580335 1353 + 0.552846
NA YPN_0539 MotA/TolQ/ExbB proton channel family proteinchromosome CDS654236 1038 + 0.519268
NA YPN_1732 hypothetical proteinchromosome CDS1950116 600 + 0.373333
NA YPN_3731 hypothetical proteinchromosome CDS4283413 315 - 0.520635
NA YPN_0083 chaperone proteinchromosome CDS115012 819 - 0.482295
NA YPN_3776 hypothetical proteinchromosome CDS4328827 489 - 0.466258
NA YPN_0568 flagellar switch proteinchromosome CDS680694 414 - 0.444444
NA YPN_1933 chaperone proteinchromosome CDS2182073 753 + 0.446215
NA YPN_2315 flagellar hook-associated protein 3chromosome CDS2596709 1014 - 0.476331
NA YPN_0594 flagellinchromosome CDS703587 1224 + 0.5
NA YPN_1683 peptidase family U7 proteinchromosome CDS1897851 1032 + 0.485465
NA YPN_1954 hypothetical proteinchromosome CDS2204281 1611 - 0.509001
NA YPN_3018 general protein secretion proteinchromosome CDS3388850 1047 - 0.344795
NA YPN_0565 flagellar assembly proteinchromosome CDS678873 774 - 0.47416
NA YPN_2364 membrane proteinchromosome CDS2646084 1377 - 0.520697
NA YPN_2294 flagellar motor switch protein FliGchromosome CDS2576674 993 + 0.521652
NA YPN_2297 flagellar protein FliJchromosome CDS2579892 447 + 0.478747
NA YPN_3017 general secretion pathway protein Gchromosome CDS3388393 438 - 0.394977
NA YPN_1963 chemotaxis protein CheWchromosome CDS2220199 498 - 0.473896
NA YPN_3691 fimbrial proteinchromosome CDS4236896 558 - 0.460573
NA YPN_0571 flagellar hook-basal body complex proteinchromosome CDS683567 381 + 0.514436
NA YPN_1436 pili chaperone proteinchromosome CDS1636390 762 + 0.412073
NA YPN_2283 flagellar protein FliSchromosome CDS2567001 399 + 0.466165
NA YPN_0150 cell division proteinchromosome CDS192234 1608 + 0.485075
NA YPN_3010 prepilin peptidasechromosome CDS3383410 843 - 0.358244
NA YPN_2281 thermoregulated motility proteinchromosome CDS2564184 1110 - 0.468468
NA YPN_0663 prepilin peptidase dependent protein D precursorchromosome CDS777492 465 - 0.445161
NA YPN_1934 outer membrane usher proteinchromosome CDS2183013 2448 + 0.461193
NA YPN_2317 flagellar protein FlgJchromosome CDS2600363 945 - 0.540741
NA YPN_3690 hypothetical proteinchromosome CDS4234991 1830 - 0.448087
NA YPN_1441 fimbrial proteinchromosome CDS1641258 609 + 0.425287
NA YPN_2302 flagellar protein FliOchromosome CDS2583844 537 + 0.577281
NA YPN_2325 flagellar basal-body rod protein FlgBchromosome CDS2607184 414 - 0.502415
NA YPN_1971 hypothetical proteinchromosome CDS2232461 1320 + 0.47803
NA YPN_0564 flagellar assembly proteinchromosome CDS677740 1134 - 0.446208
NA YPN_3403 type III secretion system componentchromosome CDS3878349 1086 - 0.529466
NA YPN_1435 frimbrial proteinchromosome CDS1635688 546 + 0.443223
NA YPN_0556 fimbrial chaperone proteinchromosome CDS669755 720 + 0.488889
NA YPN_0555 outer membrane usher proteinchromosome CDS667257 2481 + 0.503023
NA YPN_MT0065 F1 capsule anchoring proteinpMT CDS67602 2502 - 0.396083
NA YPN_2292 flagellar hook-basal body complex protein FliEchromosome CDS2574301 312 - 0.496795
NA YPN_MT0006 phage tail proteinpMT CDS6536 4632 - 0.526554
NA YPN_2333 flagellar biosynthesis protein FlhAchromosome CDS2614336 2079 - 0.518037
NA YPN_1922 chaperone proteinchromosome CDS2168911 780 - 0.441026
NA YPN_0085 outer membrane usher proteinchromosome CDS117180 2628 - 0.471081
NA YPN_0521 ABC-transporter outer membrane componentchromosome CDS632097 1398 - 0.472103
NA YPN_2324 flagellar basal-body rod protein FlgCchromosome CDS2606774 405 - 0.540741
NA YPN_0572 flagellar M-ring proteinchromosome CDS683957 1641 + 0.502133
NA YPN_2282 flagellar hook-associated protein 2chromosome CDS2565590 1401 + 0.465382
NA YPN_0584 hypothetical proteinchromosome CDS694097 732 + 0.554645
NA YPN_2323 basal-body rod modification protein FlgDchromosome CDS2606082 678 - 0.529499
NA YPN_3019 general secretion pathway protein Echromosome CDS3390038 1362 - 0.389868
NA YPN_2301 flagellar motor switch protein FliNchromosome CDS2583428 417 + 0.494005
NA YPN_0086 fimbrial chaperonechromosome CDS119835 732 - 0.422131
 
Yersinia pestis biovar Microtus str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP_3665 hypothetical proteinchromosome CDS4172955 1638 - 0.517094
NA YP_3251 hypothetical proteinchromosome CDS3623126 2349 - 0.479353
NA YP_pMT021 hypothetical proteinpMT1 CDS22114 663 - 0.526395
NA YP_pMT015 hypothetical proteinpMT1 CDS18691 747 - 0.535475
NA YP_1575 hypothetical proteinchromosome CDS1723749 369 + 0.425474
NA YP_0318 hypothetical proteinchromosome CDS334595 201 - 0.432836
NA YP_3003 hypothetical proteinchromosome CDS3341571 834 - 0.302158
NA YP_2058 hypothetical proteinchromosome CDS2287240 600 + 0.373333
NA YP_3502 Predicted ATPase involved in pili biogenesis, PilT homologschromosome CDS3987909 1131 + 0.476569
NA YP_2443 chromosome pseudo2715708 786 - 0.482188
caf1A YP_pMT083 putative F1 capsule anchoring proteinpMT1 CDS73933 2502 - 0.396083
caf1M YP_pMT084 putative F1 chaperone proteinpMT1 CDS76459 810 - 0.408642
cheA YP_1796 chemotaxis protein CheAchromosome CDS1992021 2172 + 0.501842
cheB YP_1809 chemotaxis-specific methylesterasechromosome CDS2013135 1053 + 0.530864
cheD1 YP_1806 methyl-accepting chemotaxis proteinchromosome CDS2008626 1674 + 0.480287
cheD2 YP_2855 putative methyl-accepting chemotaxis proteinchromosome CDS3167075 1701 + 0.450323
cheR YP_1808 protein glutamate methyltransferasechromosome CDS2012251 888 + 0.502252
cheW YP_1797 chemotaxis protein CheWchromosome CDS1994355 498 + 0.473896
cheZ YP_1811 chemotaxis protein CheZchromosome CDS2014687 645 + 0.489922
cpxP YP_0075 hypothetical proteinchromosome CDS84278 489 + 0.466258
ecpD1 YP_1733 putative chaperone proteinchromosome CDS1917572 780 + 0.441026
ecpD2 YP_2571 putative pili chaperone proteinchromosome CDS2846854 780 - 0.412821
fimA1 YP_1665 fimbrial proteinchromosome CDS1833888 531 - 0.485876
fimA2 YP_1732 putative fimbrial proteinchromosome CDS1916877 543 + 0.425414
fimA3 YP_1735 putative fimbrial componenetchromosome CDS1921036 1170 + 0.460684
fimA4 YP_2572 putative fimbrial proteinchromosome CDS2847772 555 - 0.443243
fimA5 YP_2756 putative fimbrial proteinchromosome CDS3062525 609 + 0.425287
fimA6 YP_3169 putative fimbrial proteinchromosome CDS3537782 531 - 0.436911
fimA7 YP_3406 fimbrial proteinchromosome CDS3820120 645 - 0.427907
fimC1 YP_0460 putative fimbrial chaperonechromosome CDS486117 744 + 0.435484
fimC10 YP_3403 putative fimbrial chaperonechromosome CDS3816694 828 - 0.426329
fimC2 YP_1661 probable pili assembly chaperonechromosome CDS1828409 741 - 0.442645
fimC3 YP_1664 probable pili assembly chaperonechromosome CDS1833151 645 - 0.424806
fimC4 YP_1722 putative chaperone proteinchromosome CDS1904455 753 - 0.446215
fimC5 YP_1736 putative chaperone proteinchromosome CDS1922202 804 + 0.482587
fimC6 YP_3012 fimbrial chaperone proteinchromosome CDS3352157 720 + 0.488889
fimC7 YP_3165 putative pilus chaperone, PapD familychromosome CDS3532165 819 - 0.482295
fimC8 YP_3168 putative fimbrial chaperonechromosome CDS3536987 732 - 0.422131
fimD1 YP_0459 putative outer membrane fimbrial usher proteinchromosome CDS483667 2379 + 0.461538
fimD2 YP_1663 probable fimbrial usher proteinchromosome CDS1830511 2592 - 0.494985
fimD3 YP_1721 probable outer membrane usher proteinchromosome CDS1901854 2448 - 0.461193
fimD4 YP_1734 putative outer membrane usher proteinchromosome CDS1918433 2613 + 0.493685
fimD5 YP_3167 putative outer membrane usher proteinchromosome CDS3534332 2628 - 0.471081
fimD6 YP_3404 putative outer membrane usher proteinchromosome CDS3817554 636 - 0.490566
fimD7 YP_3405 hypothetical proteinchromosome CDS3818215 1830 - 0.448087
flgA YP_1595 flagellar basal body P-ring biosynthesis proteinchromosome CDS1744830 765 + 0.517647
flgB1 YP_1594 flagellar basal body rod proteinchromosome CDS1744244 414 - 0.502415
flgB2 YP_3034 flagellar basal body rod proteinchromosome CDS3373607 447 + 0.463087
flgC1 YP_1593 flagellar basal body rod proteinchromosome CDS1743834 405 - 0.540741
flgC2 YP_3035 flagellar basal body rod proteinchromosome CDS3374056 426 + 0.528169
flgD1 YP_1592 basal-body rod modification protein FlgDchromosome CDS1743142 678 - 0.529499
flgD2 YP_3036 flagellar basal body rod modification proteinchromosome CDS3374484 657 + 0.512938
flgE1 YP_1591 flagellar hook proteinchromosome CDS1741654 1287 - 0.508159
flgE2 YP_3037 flagellar hook proteinchromosome CDS3375195 1242 + 0.509662
flgF1 YP_1590 flagellar basal-body rod protein FlgFchromosome CDS1741003 630 - 0.579365
flgF2 YP_3038 putative flagellar rod proteinchromosome CDS3376436 732 + 0.554645
flgG1 YP_1589 flagellar basal-body rod protein FlgGchromosome CDS1740324 699 - 0.516452
flgG2 YP_3039 flagellar basal-body rod protein FlgGchromosome CDS3377235 786 + 0.522901
flgH1 YP_1588 flagellar L-ring protein precursorchromosome CDS1739491 732 - 0.52459
flgH2 YP_3040 flagellar L-ring protein precursorchromosome CDS3378055 666 + 0.53003
flgI1 YP_1587 flagellar P-ring protein precursorchromosome CDS1738367 1110 - 0.545946
flgI2 YP_3041 flagellar P-ring protein precursorchromosome CDS3378734 1176 + 0.542517
flgJ1 YP_1586 flagellar biosynthesis proteinchromosome CDS1737423 945 - 0.540741
flgJ2 YP_3042 flagellar protein FlgJchromosome CDS3379919 294 + 0.503401
flgK1 YP_1585 flagellar hook-associated proteinchromosome CDS1735174 1665 - 0.500901
flgK2 YP_3043 flagellar hook-associated proteinchromosome CDS3380325 1362 + 0.451542
flgL YP_1584 flagellar hook-associated proteinchromosome CDS1734055 1014 - 0.476331
flgM YP_1596 negative regulator of flagellin synthesischromosome CDS1745745 303 + 0.475248
flgN1 YP_1597 flagella synthesis protein FlgNchromosome CDS1746063 444 + 0.488739
flhA2 YP_1601 flagellar biosynthesis proteinchromosome CDS1751396 2079 - 0.518037
flhB2 YP_1602 flagellar biosynthesis proteinchromosome CDS1753474 1161 - 0.525409
flhB3 YP_3018 flagellar biosynthesis proteinchromosome CDS3360079 1134 - 0.446208
fliC YP_1551 flagellinchromosome CDS1701530 1110 - 0.467568
fliD1 YP_1552 flagellar hook-associated proteinchromosome CDS1702936 1401 + 0.465382
fliD2 YP_3049 putative flagellar hook-associated proteinchromosome CDS3387379 1278 + 0.41784
fliE1 YP_1561 flagellar basal body proteinchromosome CDS1711668 372 - 0.494624
fliE2 YP_3025 flagellar hook-basal body complex protein FliEchromosome CDS3365906 381 + 0.514436
fliF2 YP_1562 flagellar M-ring proteinchromosome CDS1712332 1713 + 0.532983
fliF3 YP_3026 flagellar M-ring proteinchromosome CDS3366296 1641 + 0.502133
fliG1 YP_1563 flagellar motor proteinchromosome CDS1714041 993 + 0.521652
fliG2 YP_3027 flagellar motor proteinchromosome CDS3367908 1044 + 0.503831
fliH1 YP_1564 flagellar assembly proteinchromosome CDS1715005 738 + 0.550135
fliH2 YP_3028 flagellar assembly proteinchromosome CDS3368929 744 + 0.537634
fliI1 YP_0421 flagellum-specific ATP synthasechromosome CDS447214 1341 + 0.574944
fliI2 YP_1565 flagellum-specific ATP synthasechromosome CDS1715681 1479 + 0.54902
fliI3 YP_3029 flagellum-specific ATP synthasechromosome CDS3369665 1341 + 0.580164
fliJ YP_1566 flagellar proteinchromosome CDS1717259 447 + 0.478747
fliK1 YP_1567 flagellar hook-length control protein FliKchromosome CDS1717702 1353 + 0.552846
fliK2 YP_3052 putative flagellar hook-length control proteinchromosome CDS3389376 1140 + 0.520175
fliL YP_1568 flagellar biosynthesis proteinchromosome CDS1719321 471 + 0.47983
fliM YP_3023 Flagellar motor switch proteinchromosome CDS3363439 900 - 0.375556
fliM1 YP_1569 flagellar motor switch proteinchromosome CDS1719797 1002 + 0.50499
fliN YP_1570 flagellar motor switch proteinchromosome CDS1720795 417 + 0.491607
fliN1 YP_0424 type III secretion proteinchromosome CDS449309 963 + 0.54621
fliN2 YP_3022 flagellar switch proteinchromosome CDS3363033 414 - 0.444444
fliO YP_1571 flagellar biosynthesis proteinchromosome CDS1721211 537 + 0.575419
fliP2 YP_1572 flagellar biosynthesis proteinchromosome CDS1721744 825 + 0.513939
fliP3 YP_3021 flagellar biosynthetic protein FliPchromosome CDS3362266 771 - 0.514916
fliQ2 YP_1573 flagellar biosynthesis proteinchromosome CDS1722674 270 + 0.522222
fliQ3 YP_3020 Flagellar biosynthesis/type III secretory pathway proteinchromosome CDS3361992 273 - 0.450549
fliR2 YP_1574 flagellar biosynthesis proteinchromosome CDS1722946 783 + 0.496807
fliR3 YP_3019 flagellar biosynthetic protein FliRchromosome CDS3361212 774 - 0.47416
fliS1 YP_1553 flagellar protein FliSchromosome CDS1704347 399 + 0.466165
fliS2 YP_3050 flagellar protein FliSchromosome CDS3388666 381 + 0.388451
ftsA1 YP_0147 Predicted ATPase of the HSP70 class involved in cell divisionchromosome CDS161789 942 + 0.514862
gspD2 YP_0410 possible type III secretion proteinchromosome CDS438389 1572 + 0.43257
gspD3 YP_2840 putative general secretion proteinchromosome CDS3153800 1923 + 0.333333
gspE YP_2841 general secretion pathway protein Echromosome CDS3155719 1512 + 0.39418
hofB YP_0258 putative integral membrane proteinchromosome CDS259708 1557 - 0.460501
hofC YP_0257 putative type II secretion system proteinchromosome CDS258512 1200 - 0.455
hofF YP_2842 putative general protein secretion proteinchromosome CDS3157211 1209 + 0.339123
hofG1 YP_2843 general secretion pathway protein Gchromosome CDS3158439 438 + 0.394977
hofG2 YP_2844 General secretory pathway proteins G and H and related periplasmic/secreted proteinschromosome CDS3158833 591 + 0.338409
hofG3 YP_2845 general secretion pathway protein Ichromosome CDS3159461 345 + 0.342029
hofG5 YP_2877 putative prepilin peptidase dependent proteinchromosome CDS3191477 570 + 0.461404
lfgA YP_3033 flagellar basal body P-ring biosynthesis proteinchromosome CDS3372701 918 - 0.486928
motA1 YP_1794 flagellar motor proteinchromosome CDS1989825 888 + 0.48536
motA2 YP_3055 flagellar motor proteinchromosome CDS3391741 870 + 0.468966
motB1 YP_1795 flagellar motor proteinchromosome CDS1990709 1302 + 0.489247
motB2 YP_3056 flagellar motor proteinchromosome CDS3392610 912 + 0.472588
pilF YP_2747 putative fimbrial biogenesis proteinchromosome CDS3048096 750 - 0.492
ppdD YP_0259 putative prepilin peptidase dependent protein D precursorchromosome CDS261239 465 - 0.447312
pppA1 YP_2850 putative type IV prepilin peptidasechromosome CDS3162945 915 + 0.357377
psaB YP_1288 chaperone protein PsaB precursorchromosome CDS1409882 822 - 0.377129
psaC YP_1287 outer membrane usher protein PsaC precursorchromosome CDS1407327 2514 - 0.492045
smfA YP_2404 putative mannose-resistant/Proteus-like fimbrialproteinchromosome CDS2672900 531 - 0.463277
tap YP_1807 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2010483 1611 + 0.509001
tar1 YP_0911 putative methyl-accepting chemotaxis transmembrane proteinchromosome CDS972397 1815 + 0.501377
tar3 YP_3973 methyl-accepting chemotaxis protein IIchromosome CDS4522218 1950 + 0.492308
virB11 YP_pCRY16 type IV secretory pathway VirB11 componentpCRY CDS12494 1026 + 0.473684
yapA YP_2752 putative autotransporter proteinchromosome CDS3054348 4485 + 0.493423
yopD YP_pCD55 putative Yop negative regulation/targeting component YopDpCD1 CDS40645 921 + 0.431053
yscC YP_pCD31 putative type III secretion protein YscCpCD1 CDS21303 1824 - 0.454496
yscL YP_pCD22 type III secretion proteinpCD1 CDS16414 666 - 0.447447
yscN YP_pCD43 type III secretion system ATPasepCD1 CDS31370 1320 - 0.508333
yscQ YP_pCD40 type III secretion proteinpCD1 CDS28622 924 - 0.481602
 
Yersinia pestis biovar Orientalis str. IP275, IP275
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YpIP275_pIP1202_0111 type IV conjugative transfer system signal peptidasepIP1202 CDS86048 531 + 0.510358
NA YpIP275_pIP1202_0045 type IV conjugative transfer system proteinpIP1202 CDS27255 1161 + 0.53919
NA YpIP275_pIP1202_0046 type IV conjugative transfer system proteinpIP1202 CDS28457 996 + 0.498996
NA YpIP275_pIP1202_0044 type IV conjugative transfer system proteinpIP1202 CDS26371 885 + 0.501695
NA YpIP275_pIP1202_0013 signal peptide peptidase SppA domain proteinpIP1202 CDS8485 978 + 0.541922
traC YpIP275_pIP1202_0109 type IV conjugative transfer system protein TraCpIP1202 CDS83272 2448 + 0.525327
 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pYV0054 yopD; putative Yop negative regulation/targeting componentpYV CDS36551 921 - 0.431053
NA pYV0079 yscC; putative type III secretion proteinpYV CDS55006 1824 + 0.453947
NA pYV0070 yscQ; putative type III secretion proteinpYV CDS48587 924 + 0.481602
NA pYV0088 yscL; putative type III secretion proteinpYV CDS61086 633 + 0.450237
NA pYV0067 putative Yops secretion ATP synthasepYV CDS45443 1320 + 0.508333
triJ pYptb0015 TriJ proteinpYptb32953 CDS12262 1014 + 0.475345
 
Yersinia pseudotuberculosis IP 32953, IP32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB2668 putative outer membrane fimbrial usher porinchromosome CDS3149957 2712 - 0.456121
NA YPTB3322 putative flagellar hook-length control proteinchromosome CDS3956375 1098 - 0.518215
NA YPTB3212 putative outer membrane protein secreting MTB familychromosome CDS3777406 1125 - 0.477333
NA YPTB0158 putative outer membrane fimbrial usher porinchromosome CDS187253 2652 - 0.470965
NA YPTB2385 probable outer membrane usher proteinchromosome CDS2811932 2448 + 0.461193
NA YPTB2670 frimbrial proteinchromosome CDS3153675 546 - 0.446886
NA YPTB1812 putative phage portal proteinchromosome CDS2158554 2121 + 0.502122
NA YPTB3755 hypothetical proteinchromosome CDS4454443 897 - 0.521739
NA YPTB0360 putative fimbrial chaperonechromosome CDS426662 744 + 0.43414
NA YPTB0159 putative fimbrial chaperonechromosome CDS189932 732 - 0.422131
NA YPTB0160 putative fimbrial proteinchromosome CDS190727 531 - 0.431262
NA YPTB3896 fimbrial proteinchromosome CDS4651190 558 - 0.460573
NA YPTB0763 hypothetical proteinchromosome CDS919414 201 - 0.432836
NA YPTB3031 hypothetical proteinchromosome CDS3579414 570 - 0.461404
NA YPTB2370 putative chaperone proteinchromosome CDS2793179 804 - 0.482587
NA YPTB2843 putative fimbrial biogenesis proteinchromosome CDS3358797 750 - 0.489333
NA YPTB0312 possible type III secretion protein EscC/SpiA, outer membrane porechromosome CDS380872 1572 + 0.43257
NA YPTB3061 general secretion pathway protein Hchromosome CDS3610749 543 - 0.346225
NA YPTB1920 probable pili assembly chaperonechromosome CDS2254592 732 - 0.423497
NA YPTB0326 type III secretion proteinchromosome CDS391854 921 + 0.546145
NA YPTB2667 fimbrial proteinchromosome CDS3149364 609 - 0.433498
NA YPTB0655 hypothetical proteinchromosome CDS777702 1611 + 0.515208
NA YPTB2371 putative fimbrial proteinchromosome CDS2793979 1164 - 0.462199
NA YPTB0359 putative outer membrane fimbrial usher proteinchromosome CDS424212 2379 + 0.46322
NA YPTB1921 fimbrial proteinchromosome CDS2255416 531 - 0.485876
NA YPTB2669 putative pili chaperone proteinchromosome CDS3152757 762 - 0.412073
NA YPTB0323 flagellum-specific ATP synthasechromosome CDS389720 1338 + 0.574738
NA YPTB3055 Prepilin peptidasechromosome CDS3606313 843 - 0.357058
NA YPTB2374 putative fimbrial proteinchromosome CDS2798850 543 - 0.425414
NA YPTB3377 hypothetical proteinchromosome CDS4010851 834 + 0.300959
NA YPTB3894 putative fimbrial chaperonechromosome CDS4647756 768 - 0.427083
NA YPTB0156 putative chaperone proteinchromosome CDS185085 747 - 0.481928
NA YPTB1819 hypothetical proteinchromosome CDS2165504 2136 + 0.492041
NA YPTB1919 putative outer membrane fimbrial usher porinchromosome CDS2251952 2592 - 0.494985
NA YPTB2661 possible OmpA/MotB family proteinchromosome CDS3142851 1377 - 0.48366
NA YPTB0236 hypothetical proteinchromosome CDS277845 2334 - 0.477721
NA YPTB3362 fimbrial chaperone proteinchromosome CDS3993946 720 - 0.490278
NA YPTB3363 outer membrane fimbrial usher porinchromosome CDS3994683 2481 - 0.503829
NA YPTB1917 probable pili assembly chaperonechromosome CDS2249850 741 - 0.441296
cheA YPTB2405 chemotaxis protein CheAchromosome CDS2839808 2172 - 0.50046
cheB YPTB2398 chemotaxis-specific methylesterasechromosome CDS2829091 1050 - 0.531429
cheD YPTB3051 putative methyl-accepting chemotaxis protein.chromosome CDS3602717 1644 - 0.456204
cheD YPTB2401 methyl-accepting chemotaxis proteinchromosome CDS2832980 1674 - 0.479689
cheR YPTB2399 chemotaxis protein methyltransferasechromosome CDS2830140 873 - 0.504009
cheW YPTB2404 chemotaxis protein CheWchromosome CDS2839148 498 - 0.471888
cheZ YPTB2396 chemotaxis protein CheZchromosome CDS2827947 645 - 0.488372
cpxP YPTB0071 hypothetical proteinchromosome CDS82113 489 + 0.464213
ecpD YPTB2373 putative chaperone proteinchromosome CDS2797833 780 - 0.441026
flaA YPTB3326 putative flagellinchromosome CDS3959701 1203 - 0.507066
flgA YPTB1671 flagellar basal body P-ring biosynthesis proteinchromosome CDS2024781 699 - 0.522175
flgA YPTB3341 flagellar basal body P-ring biosynthesis proteinchromosome CDS3973294 819 + 0.498168
flgB YPTB1672 flagellar basal body rod proteinchromosome CDS2025718 414 + 0.5
flgB YPTB3340 flagellar basal body rod proteinchromosome CDS3972760 447 - 0.463087
flgC YPTB1673 flagellar basal body rod proteinchromosome CDS2026137 405 + 0.540741
flgC YPTB3339 flagellar basal body rod proteinchromosome CDS3972332 426 - 0.530516
flgD YPTB1674 basal-body rod modification protein FlgDchromosome CDS2026556 687 + 0.526929
flgD YPTB3338 flagellar basal body rod modification proteinchromosome CDS3971673 657 - 0.517504
flgE YPTB3337 flagellar hook proteinchromosome CDS3970374 1245 - 0.505221
flgE YPTB1675 flagellar hook proteinchromosome CDS2027444 1287 + 0.51049
flgF YPTB3336 putative flagellar basal-body rod protein FlgFchromosome CDS3969643 732 - 0.554645
flgF YPTB1676 flagellar basal-body rod protein FlgFchromosome CDS2028752 756 + 0.564815
flgG YPTB1677 flagellar basal-body rod protein FlgG (distal rod protein)chromosome CDS2029533 783 + 0.515964
flgG YPTB3335 putative flagellar basal-body rod proteinchromosome CDS3968790 786 - 0.524173
flgH YPTB3334 flagellar L-ring protein precursorchromosome CDS3968090 666 - 0.527027
flgH YPTB1678 flagellar L-ring protein precursorchromosome CDS2030459 690 + 0.521739
flgI YPTB1679 flagellar P-ring protein precursorchromosome CDS2031163 1110 + 0.545946
flgI YPTB3333 flagellar P-ring protein precursorchromosome CDS3966901 1176 - 0.543367
flgJ YPTB1680 flagellar biosynthesis proteinchromosome CDS2032272 945 + 0.540741
flgJ YPTB3332 putative flagellar proteinchromosome CDS3966598 294 - 0.496599
flgK YPTB1681 flagellar hook-associated proteinchromosome CDS2033944 1665 + 0.5003
flgK YPTB3331 flagellar hook-associated proteinchromosome CDS3965124 1362 - 0.457416
flgL YPTB1682 flagellar hook-associated proteinchromosome CDS2035747 981 + 0.479103
flgL YPTB3330 flagellar hook-associated proteinchromosome CDS3964172 924 - 0.404762
flgM YPTB1670 negative regulator of flagellin synthesischromosome CDS2024328 303 - 0.475248
flgN YPTB1669 flagella synthesis protein FlgNchromosome CDS2023869 441 - 0.485261
flhA YPTB1666 flagellar biosynthesis proteinchromosome CDS2017622 2079 + 0.519
flhA YPTB3357 putative flagellar biosynthesis/export membrane protein flhA, fhiA.chromosome CDS3986716 2097 + 0.450167
flhB YPTB1665 flagellar biosynthesis proteinchromosome CDS2016462 1161 + 0.521102
flhB YPTB3356 flagellar biosynthesis proteinchromosome CDS3985596 1134 + 0.447972
fliC YPTB1714 flagellinchromosome CDS2068249 1110 + 0.465766
fliD YPTB3325 putative flagellar hook-associated proteinchromosome CDS3958195 1287 - 0.439782
fliD YPTB1713 flagellar hook-associated proteinchromosome CDS2066552 1401 - 0.463954
fliE YPTB3349 possible flagellar hook-basal body complex proteinchromosome CDS3980522 381 - 0.51706
fliE YPTB1704 flagellar basal body proteinchromosome CDS2058868 312 + 0.49359
fliF YPTB3348 flagellar M-ring proteinchromosome CDS3978872 1641 - 0.502742
fliF YPTB1703 flagellar M-ring proteinchromosome CDS2056803 1713 - 0.534151
fliG YPTB3347 flagellar motor proteinchromosome CDS3977857 1044 - 0.505747
fliG YPTB1702 flagellar motor proteinchromosome CDS2055814 993 - 0.520644
fliH YPTB1701 flagellar assembly proteinchromosome CDS2055105 717 - 0.546722
fliH YPTB3346 flagellar assembly proteinchromosome CDS3977136 717 - 0.542538
fliI YPTB1700 flagellum-specific ATP synthasechromosome CDS2053705 1401 - 0.552463
fliI YPTB3345 flagellum-specific ATP synthasechromosome CDS3975803 1341 - 0.57569
fliJ YPTB1699 flagellar proteinchromosome CDS2053183 447 - 0.478747
fliK YPTB1698 flagellar hook-length control protein FliKchromosome CDS2051834 1353 - 0.553585
fliL YPTB1697 flagellar biosynthesis proteinchromosome CDS2051078 471 - 0.47983
fliM YPTB1696 flagellar motor switch proteinchromosome CDS2050071 1002 - 0.503992
fliN YPTB1695 flagellar motor switch proteinchromosome CDS2049658 417 - 0.496403
fliN YPTB3352 Flagellar switch proteinchromosome CDS3983362 414 + 0.444444
fliO YPTB1694 possible flagellar protein FliOchromosome CDS2049062 369 - 0.563686
fliP YPTB3353 putative flagellar assembly/export protein, fliPchromosome CDS3983772 771 + 0.516213
fliP YPTB1693 flagellar biosynthesis proteinchromosome CDS2048241 825 - 0.513939
fliQ YPTB3354 putative flagellar assembly/export protein, fliQchromosome CDS3984544 273 + 0.450549
fliQ YPTB1692 flagellar biosynthesis proteinchromosome CDS2047866 270 - 0.518519
fliR YPTB3355 putative flagellar assembly/export protein, fliRchromosome CDS3984823 774 + 0.47416
fliR YPTB1691 flagellar biosynthesis proteinchromosome CDS2047081 783 - 0.496807
fliS YPTB1712 flagellar protein FliSchromosome CDS2066143 399 - 0.471178
fliS YPTB3324 putative flagellar proteinchromosome CDS3957802 384 - 0.388021
gspD YPTB3065 general secretion pathway protein Dchromosome CDS3614450 1923 - 0.334373
gspE YPTB3064 general secretion pathway protein Echromosome CDS3612942 1512 - 0.39418
gspF YPTB3063 putative general secretion pathway protein F.chromosome CDS3611753 1203 - 0.339152
gspG YPTB3062 general secretion pathway protein Gchromosome CDS3611296 438 - 0.394977
gspI YPTB3060 General secretion pathway protein Ichromosome CDS3610367 345 - 0.330435
hofB YPTB0706 putative outer membrane protein export (MTB) sytem, hofB subunitchromosome CDS845082 1539 - 0.461339
hofC YPTB0705 putative outer membrane protein export (MTB) sytem, hofC subunitchromosome CDS843886 1200 - 0.456667
htrE YPTB2372 putative outer membrane fimbrial usher porinchromosome CDS2795139 2613 - 0.493685
motA YPTB3319 flagellar motor proteinchromosome CDS3954296 867 - 0.468281
motA YPTB2407 flagellar motor proteinchromosome CDS2843306 888 - 0.488739
motB YPTB3318 flagellar motor proteinchromosome CDS3953385 795 - 0.451572
motB YPTB2406 flagellar motor proteinchromosome CDS2841990 1320 - 0.491667
ppdD YPTB0707 putative major component of type IV pilin, prelipin peptidase dependent proteinchromosome CDS846613 465 - 0.447312
psaB YPTB1335 chaperone protein PsaB precursorchromosome CDS1589475 822 + 0.377129
psaC YPTB1336 outer membrane usher protein PsaC precursorchromosome CDS1590380 2472 + 0.497168
smfA YPTB2624 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS3100626 531 - 0.46516
smfA YPTB3364 putative mannose-resistant Proteus-like fimbrial proteinchromosome CDS3997470 531 - 0.474576
tap YPTB2400 methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide ch...chromosome CDS2831185 1611 - 0.506518
tar YPTB3924 methyl-accepting chemotaxis protein IIchromosome CDS4683710 1950 - 0.490256
trg YPTB2412 methyl-accepting chemotaxis protein III (MCP-III) (ribose and...chromosome CDS2851452 1740 + 0.482184
tsr2 YPTB1265 putative methyl-accepting chemotaxis proteinchromosome CDS1515468 1788 - 0.503915
yapA YPTB2848 putative pertactin family virulence factor/autotransporterchromosome CDS3365050 4350 + 0.50092
yqiG YPTB3895 outer membrane fimbrial usher porinchromosome CDS4648616 2499 - 0.458183