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2024-06-01 22:45:23

Gene list

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COG category: Translation, ribosomal structure and biogenesis

Number of genes found: 6102

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS BU403 alanyl-tRNA synthetasechromosome CDS440103 2637 + 0.24763
argS BU242 arginyl-tRNA synthetasechromosome CDS271888 1725 - 0.263768
asnS BU360 asparaginyl-tRNA synthetasechromosome CDS392443 1401 - 0.289079
aspS BU316 aspartyl-tRNA synthetasechromosome CDS349274 1761 + 0.247587
cca BU061 tRNA nucleotidyltransferasechromosome CDS66272 1245 + 0.26506
cysS BU487 cysteinyl-tRNA synthetasechromosome CDS536790 1395 - 0.25233
deaD BU372 ATP-dependent RNA helicase DeaDchromosome CDS409362 1806 - 0.330011
def BU496 polypeptide deformylasechromosome CDS544994 522 + 0.247126
efp BU020 elongation factor Pchromosome CDS20985 612 + 0.271242
fmt BU497 methionyl-tRNA formyltransferasechromosome CDS545523 945 + 0.268783
frr BU234 ribosome recycling factorchromosome CDS258051 558 + 0.268817
ftsJ BU383 cell division protein FtsJchromosome CDS424252 621 - 0.273752
fusA BU527 elongation factor Gchromosome CDS561787 2109 - 0.336178
glnS BU415 glutaminyl-tRNA synthetasechromosome CDS449495 1716 + 0.253496
gltX BU070 glutamyl-tRNA synthetasechromosome CDS74771 1404 + 0.263533
glyQ BU136 glycyl-tRNA synthetase alpha subunitchromosome CDS142235 939 - 0.273695
glyS BU135 glycyl-tRNA synthetase beta chainchromosome CDS140188 2073 - 0.23396
gshB BU547 glutathione synthetasechromosome CDS583707 963 + 0.284528
hemK BU172 HemK proteinchromosome CDS185620 834 + 0.258993
hisS BU288 histidyl-tRNA synthetasechromosome CDS315404 1272 + 0.249214
ileS BU149 isoleucyl-tRNA synthetasechromosome CDS156645 2823 - 0.266029
infA BU315 translation initiation factor IF-1chromosome CDS348887 219 + 0.30137
infB BU377 translation initiation factor IF-2chromosome CDS415631 2595 - 0.285164
infC BU126 translation initiation factor IF-3chromosome CDS132392 540 + 0.32037
ksgA BU141 dimethyladenosine transferasechromosome CDS147408 822 + 0.22871
leuS BU444 leucyl-tRNA synthetasechromosome CDS483881 2580 + 0.263178
lysS BU437 lysyl-tRNA synthetasechromosome CDS476393 1521 + 0.25904
map BU230 methionine aminopeptidasechromosome CDS254517 795 - 0.272956
metG BU109 methionyl-tRNA synthetasechromosome CDS113965 1644 + 0.252433
miaA BU569 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS601487 909 - 0.258526
pheS BU129 phenylalanyl-tRNA synthetase alpha chainchromosome CDS133809 990 + 0.253535
pnp BU373 polyribonucleotide nucleotidyltransferasechromosome CDS411548 2124 - 0.327684
prfA BU171 peptide chain release factor 1chromosome CDS184538 1086 + 0.308471
prfB BU436 peptide chain release factor 2chromosome CDS475334 1050 + 0.284762
prfC BU543 peptide chain release factor 3chromosome CDS576996 1581 - 0.280202
proS BU239 prolyl-tRNA synthetasechromosome CDS266472 1719 - 0.254218
pth BU190 peptidyl-tRNA hydrolasechromosome CDS205262 534 + 0.250936
queA BU132 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS137550 1074 + 0.277467
rbfA BU376 ribosome-binding factor Achromosome CDS415223 363 - 0.23416
rimM BU395 16S rRNA processing protein RimMchromosome CDS433588 531 + 0.218456
rluC BU348 ribosomal large subunit pseudouridine synthase Cchromosome CDS382339 945 + 0.259259
rluD BU401 ribosomal large subunit pseudouridine synthase Dchromosome CDS438095 939 - 0.292865
rne BU347 ribonuclease Echromosome CDS379296 2709 - 0.262458
rnpA BU014 ribonuclease P protein componentchromosome CDS14525 348 + 0.247126
rplA BU037 50S ribosomal protein L1chromosome CDS46069 696 - 0.297414
rplB BU521 50S ribosomal protein L2chromosome CDS557474 822 - 0.345499
rplC BU524 50S ribosomal protein L3chromosome CDS559232 630 - 0.325397
rplD BU523 50S ribosomal protein L4chromosome CDS558609 606 - 0.326733
rplE BU512 50S ribosomal protein L5chromosome CDS553832 540 - 0.322222
rplF BU509 50S ribosomal protein L6chromosome CDS552541 558 - 0.31362
rplI BU562 50S ribosomal protein L9chromosome CDS594138 453 - 0.282561
rplJ BU036 50S ribosomal protein L10chromosome CDS45306 498 - 0.287149
rplK BU038 50S ribosomal protein L11chromosome CDS46767 429 - 0.296037
rplL BU035 50S ribosomal protein L7/L12chromosome CDS44871 369 - 0.317073
rplM BU391 50S ribosomal protein L13chromosome CDS429864 429 - 0.286713
rplN BU514 50S ribosomal protein L14chromosome CDS554726 369 - 0.344173
rplO BU505 50S ribosomal protein L15chromosome CDS551024 435 - 0.328736
rplP BU517 50S ribosomal protein L16chromosome CDS555657 411 - 0.36253
rplQ BU498 50S ribosomal protein L17chromosome CDS546594 393 - 0.305344
rplR BU508 50S ribosomal protein L18chromosome CDS552171 369 - 0.325203
rplS BU397 50S ribosomal protein L19chromosome CDS434945 348 + 0.301724
rplT BU128 50S ribosomal protein L20chromosome CDS133258 357 + 0.322129
rplU BU387 50S ribosomal protein L21chromosome CDS427642 327 + 0.256881
rplV BU519 50S ribosomal protein L22chromosome CDS556808 333 - 0.336336
rplW BU522 50S ribosomal protein L23chromosome CDS558310 303 - 0.254125
rplX BU513 50S ribosomal protein L24chromosome CDS554386 315 - 0.260317
rplY BU138 50S ribosomal protein L25chromosome CDS144748 288 + 0.267361
rpmA BU388 50S ribosomal protein L27chromosome CDS427973 255 + 0.32549
rpmB BU086 50S ribosomal protein L28chromosome CDS87332 228 - 0.27193
rpmC BU516 50S ribosomal protein L29chromosome CDS555460 198 - 0.277778
rpmD BU506 50S ribosomal protein L30chromosome CDS551463 180 - 0.277778
rpmE BU577 50S ribosomal protein L31chromosome CDS611349 219 - 0.283105
rpmF BU349 50S ribosomal protein L32chromosome CDS383329 165 + 0.309091
rpmG BU085 50S ribosomal protein L33chromosome CDS87154 168 - 0.255952
rpmH BU013 50S ribosomal protein L34chromosome CDS14369 144 + 0.319444
rpmI BU127 50S ribosomal protein L35chromosome CDS133018 198 + 0.287879
rpmJ BU503 50S ribosomal protein L36chromosome CDS549558 117 - 0.316239
rpsA BU309 30S ribosomal protein S1chromosome CDS341201 1677 - 0.304114
rpsB BU231 30S ribosomal protein S2chromosome CDS255574 735 + 0.287075
rpsC BU518 30S ribosomal protein S3chromosome CDS556088 702 - 0.347578
rpsD BU500 30S ribosomal protein S4chromosome CDS548049 621 - 0.304348
rpsE BU507 30S ribosomal protein S5chromosome CDS551652 504 - 0.347222
rpsF BU564 30S ribosomal protein S6chromosome CDS594992 342 - 0.269006
rpsG BU528 30S ribosomal protein S7chromosome CDS564010 471 - 0.352442
rpsH BU510 30S ribosomal protein S8chromosome CDS553088 393 - 0.312977
rpsI BU390 30S ribosomal protein S9chromosome CDS429451 393 - 0.351145
rpsJ BU525 30S ribosomal protein S10chromosome CDS559892 312 - 0.36859
rpsK BU501 30S ribosomal protein S11chromosome CDS548695 396 - 0.368687
rpsL BU529 30S ribosomal protein S12chromosome CDS564522 375 - 0.357333
rpsM BU502 30S ribosomal protein S13chromosome CDS549108 357 - 0.308123
rpsN BU511 30S ribosomal protein S14chromosome CDS553509 306 - 0.356209
rpsO BU374 30S ribosomal protein S15chromosome CDS413873 270 - 0.244444
rpsP BU394 30S ribosomal protein S16chromosome CDS433347 240 + 0.3125
rpsQ BU515 30S ribosomal protein S17chromosome CDS555209 252 - 0.293651
rpsR BU563 30S ribosomal protein S18chromosome CDS594639 228 - 0.315789
rpsS BU520 30S ribosomal protein S19chromosome CDS557176 279 - 0.293907
rpsT BU151 30S ribosomal protein S20chromosome CDS160640 270 + 0.27037
rpsU BU057 30S ribosomal protein S21chromosome CDS62755 216 - 0.37963
serS BU313 seryl-tRNA synthetasechromosome CDS346190 1284 - 0.278037
smpA BU186 small protein Achromosome CDS202263 309 + 0.203883
tgt BU133 queuine tRNA-ribosyltransferasechromosome CDS138664 1113 + 0.267745
thrS BU125 threonyl-tRNA synthetasechromosome CDS130460 1929 + 0.271125
trmD BU396 tRNA (guanine-N1)-methyltransferasechromosome CDS434133 714 + 0.295518
trmU BU261 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS286508 1107 + 0.261969
trpS BU536 tryptophanyl-tRNA synthetasechromosome CDS570134 1008 - 0.262897
truA BU199 pseudouridylate synthase Ichromosome CDS215390 801 + 0.29588
truB BU375 tRNA pseudouridine 55 synthasechromosome CDS414247 939 - 0.268371
tsf BU232 elongation factor Tschromosome CDS256385 807 + 0.288724
tufB BU526 elongation factor EF-Tuchromosome CDS560535 1185 - 0.362025
tyrS BU121 tyrosyl-tRNA synthetasechromosome CDS125936 1269 + 0.263199
valS BU366 valyl-tRNA synthetasechromosome CDS401601 2868 - 0.251743
ychF BU191 GTP-binding proteinchromosome CDS205836 1089 + 0.251607
yciL BU282 hypothetical proteinchromosome CDS307521 753 + 0.26162
yfhC BU255 hypothetical protein YfhCchromosome CDS280870 486 + 0.286008
yhaR BU371 hypothetical proteinchromosome CDS408889 387 + 0.235142
yjeA BU582 lysyl-tRNA synthetasechromosome CDS615562 975 - 0.253333
yjjT BU328 hypothetical proteinchromosome CDS363663 843 + 0.250297
yleA BU441 hypothetical proteinchromosome CDS481012 1320 + 0.273485
yrdC BU494 hypothetical proteinchromosome CDS543652 528 - 0.276515
 
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS bbp364 alanyl-tRNA synthetasechromosome CDS420763 2643 + 0.251986
argS bbp224 arginyl-tRNA synthetasechromosome CDS264814 1737 - 0.244099
asnS bbp329 asparaginyl-tRNA synthetasechromosome CDS379444 1401 - 0.275517
aspS bbp293 aspartyl-tRNA synthetasechromosome CDS342535 1731 + 0.263432
cca bbp057 tRNA nucleotidyltransferasechromosome CDS64717 1260 + 0.255556
cysS bbp431 cysteinyl-tRNA synthetasechromosome CDS505190 1410 - 0.264539
deaD bbp335 ATP-dependent RNA helicasechromosome CDS390346 1809 - 0.305694
def bbp439 polypeptide deformylasechromosome CDS513039 483 + 0.256729
efp bbp023 elongation factor Pchromosome CDS23004 570 + 0.249123
fmt bbp440 methionyl-tRNA formyltransferasechromosome CDS513523 972 + 0.279835
frr bbp216 ribosome recycling factorchromosome CDS252164 552 + 0.231884
ftsJ bbp346 ribosomal RNA large subunit methyltransferase Jchromosome CDS405411 633 - 0.301738
fusA bbp470 elongation factor Gchromosome CDS531310 2133 - 0.327239
glnS bbp375 glutaminyl-tRNA synthetasechromosome CDS429617 1653 + 0.257713
gltX bbp065 glutamyl-tRNA synthetasechromosome CDS73495 1419 + 0.262861
glyQ bbp127 glycyl-tRNA synthetase alpha subunitchromosome CDS140274 903 - 0.269103
glyS bbp126 glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS)chromosome CDS138135 2094 - 0.242598
gshB bbp490 glutathione synthetasechromosome CDS552392 975 + 0.267692
hemK bbp162 HemKchromosome CDS182787 834 + 0.260192
hisS bbp267 histidyl-tRNA synthetasechromosome CDS307258 1278 + 0.262911
ileS bbp139 isoleucyl-tRNA synthetasechromosome CDS153486 2820 - 0.269858
infA bbp292 translation initiation factor IF-1chromosome CDS342241 219 + 0.315068
infB bbp340 translation initiation factor IF-2chromosome CDS396760 2631 - 0.265678
infC bbp120 translation initiation factor IF-3chromosome CDS132598 546 + 0.28022
ksgA bbp131 dimethyladenosine transferasechromosome CDS144271 783 + 0.247765
leuS bbp395 leucyl-tRNA synthetasechromosome CDS456713 2586 + 0.265275
lysS bbp389 lysyl-tRNA synthetasechromosome CDS448844 1503 - 0.25682
map bbp212 methionine aminopeptidasechromosome CDS248425 801 - 0.278402
metG bbp103 methionyl-tRNA synthetasechromosome CDS113619 1638 + 0.26801
miaA bbp514 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS574629 972 - 0.25823
pheS bbp123 phenylalanyl-tRNA synthetase alpha chainchromosome CDS133982 987 + 0.257345
pnp bbp336 polyribonucleotide nucleotidyltransferasechromosome CDS392685 2082 - 0.315562
prfA bbp161 peptide chain release factor 1chromosome CDS181702 1089 + 0.295684
prfB bbp390 peptide chain release factor 2chromosome CDS450407 1014 - 0.280079
prfC bbp485 peptide chain release factor 3chromosome CDS544861 1599 - 0.267042
proS bbp221 prolyl-tRNA synthetasechromosome CDS259265 1725 - 0.251594
pth bbp179 peptidyl-tRNA hydrolasechromosome CDS202401 624 + 0.25641
rbfA bbp339 ribosome-binding factor Achromosome CDS396349 375 - 0.221333
rimM bbp358 16S rRNA processing protein rimMchromosome CDS415221 543 + 0.257827
rluC bbp318 ribosomal large subunit pseudouridine synthase Dchromosome CDS370167 948 + 0.240506
rluD bbp363 ribosomal large subunit pseudouridine synthase Dchromosome CDS419471 954 - 0.27044
rne bbp317 ribonuclease Gchromosome CDS368538 1233 - 0.282238
rnpA bbp014 ribonuclease P protein componentchromosome CDS15067 345 + 0.26087
rplA bbp038 50S ribosomal protein L1chromosome CDS47970 702 - 0.264957
rplB bbp464 50S ribosomal protein L2chromosome CDS526788 822 - 0.339416
rplC bbp467 50S ribosomal protein L3chromosome CDS528574 645 - 0.300775
rplD bbp466 50S ribosomal protein L4chromosome CDS527964 609 - 0.302135
rplE bbp455 50S ribosomal protein L5chromosome CDS523115 540 - 0.268519
rplF bbp452 50S ribosomal protein L6chromosome CDS521802 540 - 0.309259
rplI bbp508 50S ribosomal protein L9chromosome CDS568911 465 - 0.234409
rplJ bbp037 50S ribosomal protein L10chromosome CDS47182 507 - 0.295858
rplK bbp039 50S ribosomal protein L11chromosome CDS48668 441 - 0.29932
rplL bbp036 50S ribosomal protein L7/L12chromosome CDS46740 369 - 0.300813
rplM bbp354 50S ribosomal protein L13chromosome CDS411351 435 - 0.298851
rplN bbp457 50S ribosomal protein L14chromosome CDS523997 369 - 0.338753
rplO bbp448 50S ribosomal protein L15chromosome CDS520282 444 - 0.259009
rplP bbp460 50S ribosomal protein L16chromosome CDS524968 411 - 0.326034
rplQ bbp441 50S ribosomal protein L17chromosome CDS515758 390 - 0.3
rplR bbp451 50S ribosomal protein L18chromosome CDS521435 366 - 0.319672
rplS bbp360 50S ribosomal protein L19chromosome CDS416573 357 + 0.252101
rplT bbp122 50S ribosomal protein L20chromosome CDS133429 381 + 0.330709
rplU bbp350 50S ribosomal protein L21chromosome CDS408888 339 + 0.227139
rplV bbp462 50S ribosomal protein L22chromosome CDS526104 360 - 0.291667
rplW bbp465 50S ribosomal protein L23chromosome CDS527650 303 - 0.270627
rplX bbp456 ribosomal protein L24chromosome CDS523670 315 - 0.244444
rplY bbp129 50S ribosomal protein L25chromosome CDS142440 294 + 0.221088
rpmA bbp351 50S ribosomal protein L27chromosome CDS409216 258 + 0.341085
rpmB bbp080 50S ribosomal protein L28chromosome CDS86349 225 - 0.275556
rpmC bbp459 50S ribosomal protein L29chromosome CDS524771 198 - 0.287879
rpmD bbp449 50S ribosomal protein L30chromosome CDS520736 177 - 0.293785
rpmE bbp522 50S ribosomal protein L31chromosome CDS585580 210 - 0.271429
rpmF bbp319 50S ribosomal protein L32chromosome CDS371349 165 + 0.315152
rpmG bbp079 50S ribosomal protein L33chromosome CDS86140 168 - 0.22619
rpmH bbp013 50S ribosomal protein L34chromosome CDS14903 144 + 0.340278
rpmI bbp121 50S ribosomal protein L35chromosome CDS133189 198 + 0.272727
rpmJ bbp446 50S ribosomal protein L36chromosome CDS518799 117 - 0.299145
rpsA bbp286 30S ribosomal protein S1chromosome CDS334005 1731 - 0.292317
rpsB bbp213 30S ribosomal protein S2chromosome CDS249579 687 + 0.279476
rpsC bbp461 30S ribosomal protein S3chromosome CDS525391 708 - 0.336158
rpsD bbp443 30S ribosomal protein S4chromosome CDS517223 621 - 0.304348
rpsE bbp450 30S ribosomal protein S5chromosome CDS520909 558 - 0.336918
rpsF bbp510 30S ribosomal protein S6chromosome CDS569763 360 - 0.269444
rpsG bbp471 30S ribosomal protein S7chromosome CDS533541 471 - 0.358811
rpsH bbp453 30S ribosomal protein S8chromosome CDS522356 393 - 0.26972
rpsI bbp353 ribosomal protein S9chromosome CDS410946 393 - 0.3257
rpsJ bbp468 30S ribosomal protein S10chromosome CDS529254 315 - 0.349206
rpsK bbp444 30S ribosomal protein S11chromosome CDS517892 390 - 0.328205
rpsL bbp472 30S ribosomal protein S12chromosome CDS534079 372 - 0.344086
rpsM bbp445 30S ribosomal protein S13chromosome CDS518300 357 - 0.322129
rpsN bbp454 30S ribosomal protein S14chromosome CDS522785 306 - 0.349673
rpsO bbp337 30S ribosomal protein S15chromosome CDS395007 270 - 0.233333
rpsP bbp357 30S ribosomal protein S16chromosome CDS414937 264 + 0.253788
rpsQ bbp458 30S ribosomal protein S17chromosome CDS524521 258 - 0.271318
rpsR bbp509 30S ribosomal protein S18chromosome CDS569416 228 - 0.311404
rpsS bbp463 S19 ribosomal proteinchromosome CDS526490 279 - 0.326165
rpsT bbp140 30S ribosomal protein S20chromosome CDS156975 261 + 0.249042
rpsU bbp054 30S ribosomal protein S21chromosome CDS62223 216 - 0.328704
rsmC bbp305 ribosomal RNA small subunit methyltransferase Cchromosome CDS357059 981 + 0.231397
serS bbp290 seryl-tRNA synthetasechromosome CDS339256 1299 - 0.277136
thrS bbp119 threonyl-tRNA synthetasechromosome CDS130663 1932 + 0.287267
trmD bbp359 tRNA (Guanine-N1)-methyltransferasechromosome CDS415789 753 + 0.26826
trmU bbp242 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS279218 1113 + 0.262354
trpS bbp478 tryptophanyl-tRNA synthetasechromosome CDS538176 1002 - 0.276447
truA bbp185 tRNA pseudouridine synthase A (Pseudouridylate synthase I) (Pseudouridine synthase I) (Uracil hydrolyase) (PSU-I)chromosome CDS210481 795 + 0.300629
truB bbp338 tRNA pseudouridine synthase Bchromosome CDS395408 909 - 0.272827
tsf bbp214 elongation factor Tschromosome CDS250352 801 + 0.277154
tuf bbp469 elongation factor Tuchromosome CDS530062 1185 - 0.360338
tyrS bbp115 tyrosyl-tRNA synthetasechromosome CDS125590 1275 + 0.273725
valS bbp331 valyl-tRNA synthetasechromosome CDS382967 2871 - 0.265064
ychF bbp180 hypothetical proteinchromosome CDS203069 1092 + 0.260989
yciL bbp262 ribosomal large subunit pseudouridine synthase Bchromosome CDS300608 744 + 0.262097
yfhC bbp236 putative deaminasechromosome CDS273380 489 + 0.247444
yhaR bbp334 translational inhibitor proteinchromosome CDS389813 381 + 0.251969
yjeA bbp528 lysyl-tRNA synthetasechromosome CDS592490 969 - 0.266254
yleA bbp392 hypothetical proteinchromosome CDS452828 1338 + 0.27429
yrdC bbp438 hypothetical proteinchromosome CDS512306 561 - 0.28877
 
Buchnera aphidicola str. Cc (Cinara cedri), Cc
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS BCc_254 AlaSchromosome CDS287031 2646 + 0.163265
argS BCc_152 ArgSchromosome CDS181368 1716 - 0.177739
asnS BCc_221 AsnSchromosome CDS253255 1386 - 0.223665
cca BCc_038 Ccachromosome CDS42863 1245 + 0.208835
cysS BCc_306 CysSchromosome CDS347242 1431 - 0.197764
deaD BCc_226 ATP-dependent RNA helicasechromosome CDS260602 1731 - 0.254766
def BCc_313 Defchromosome CDS354044 450 + 0.217778
efp BCc_012 Efpchromosome CDS12893 573 + 0.232112
fmt BCc_314 Fmtchromosome CDS354529 957 + 0.198537
frr BCc_145 Frrchromosome CDS169814 558 + 0.177419
ftsJ BCc_236 FtsJchromosome CDS273579 630 - 0.203175
fusA BCc_344 FusAchromosome CDS370749 2106 - 0.301519
glnS BCc_263 GlnSchromosome CDS292106 1650 + 0.199394
gltX BCc_042 GltXchromosome CDS46858 1425 + 0.18807
glyQ BCc_086 GlyQchromosome CDS94827 882 - 0.223356
glyS BCc_085 GlySchromosome CDS92883 1941 - 0.158681
hemK BCc_112 HemKchromosome CDS128516 834 + 0.205036
hisS BCc_177 HisSchromosome CDS205733 1278 + 0.192488
ileS BCc_093 IleSchromosome CDS104019 2826 - 0.197452
infA BCc_195 InfAchromosome CDS229401 216 + 0.25463
infB BCc_231 InfBchromosome CDS266634 2154 - 0.215877
infC BCc_079 InfCchromosome CDS87438 537 + 0.251397
ksgA BCc_089 KsgAchromosome CDS97688 828 + 0.178744
leuS BCc_274 LeuSchromosome CDS307714 2544 + 0.191038
lysS BCc_270 LysSchromosome CDS302882 1509 + 0.180915
map BCc_141 Mapchromosome CDS166182 792 - 0.212121
metG BCc_072 MetGchromosome CDS78929 1644 + 0.195255
miaB BCc_272 MiaBchromosome CDS305849 1308 + 0.207187
pcnB BCc_128 PcnBchromosome CDS146438 1224 - 0.187091
pheS BCc_082 PheSchromosome CDS88747 1002 + 0.200599
pheT BCc_083 PheTchromosome CDS89764 2391 + 0.180678
pnp BCc_227 Pnpchromosome CDS262614 2082 - 0.26513
prfA BCc_111 PrfAchromosome CDS127420 1074 + 0.258845
prfB BCc_269 PrfBchromosome CDS301781 1098 + 0.189435
proS BCc_149 ProSchromosome CDS176442 1269 - 0.201734
pth BCc_123 Pthchromosome CDS139571 579 + 0.193437
rbfA BCc_230 RbfAchromosome CDS266206 351 - 0.188034
rimM BCc_247 16s rRNA processing proteinchromosome CDS281693 510 + 0.147059
rluC BCc_214 RluCchromosome CDS247506 954 + 0.186583
rluD BCc_253 RluDchromosome CDS285849 966 - 0.21118
rnpA BCc_006 RnpAchromosome CDS7377 345 + 0.144928
rplA BCc_022 50S ribosomal protein L1chromosome CDS29473 681 - 0.226138
rplB BCc_338 50S ribosomal protein L2chromosome CDS366579 822 - 0.319951
rplC BCc_341 50S ribosomal protein L3chromosome CDS368345 627 - 0.259968
rplD BCc_340 50S ribosomal protein L4chromosome CDS367719 606 - 0.252475
rplE BCc_329 50S ribosomal protein L5chromosome CDS362908 540 - 0.233333
rplF BCc_326 50S ribosomal protein L6chromosome CDS361561 540 - 0.248148
rplI BCc_368 50S ribosomal protein L9chromosome CDS389888 450 - 0.217778
rplJ BCc_021 50S ribosomal protein L10chromosome CDS28816 486 - 0.154321
rplK BCc_023 50S ribosomal protein L11chromosome CDS30156 435 - 0.25977
rplL BCc_020 50S ribosomal protein L12chromosome CDS28396 369 - 0.241192
rplM BCc_243 50S ribosomal protein L13chromosome CDS278174 429 - 0.223776
rplO BCc_322 50S ribosomal protein L15chromosome CDS360031 438 - 0.255708
rplP BCc_334 50S ribosomal protein L16chromosome CDS364766 411 - 0.29927
rplQ BCc_315 50S ribosomal protein L17chromosome CDS355598 363 - 0.264463
rplR BCc_325 50S ribosomal protein L18chromosome CDS361191 369 - 0.254743
rplS BCc_249 50S ribosomal protein L19chromosome CDS282971 348 + 0.221264
rplT BCc_081 50S ribosomal protein L20chromosome CDS88277 360 + 0.247222
rplU BCc_239 50S ribosomal protein L21chromosome CDS275965 312 + 0.198718
rplV BCc_336 50S ribosomal protein L22chromosome CDS365883 375 - 0.266667
rplW BCc_339 50S ribosomal protein L23chromosome CDS367420 303 - 0.19802
rplX BCc_330 50S ribosomal protein L24chromosome CDS363466 318 - 0.232704
rplY BCc_088 50S ribosomal protein L25chromosome CDS96893 297 + 0.148148
rpmA BCc_240 50S ribosomal protein L27chromosome CDS276315 306 + 0.251634
rpmB BCc_052 50S ribosomal protein L28chromosome CDS57563 222 - 0.22973
rpmC BCc_333 50S ribosomal protein L29chromosome CDS364566 198 - 0.166667
rpmE BCc_375 50S ribosomal protein L31chromosome CDS395104 210 - 0.247619
rpmF BCc_215 50S ribosomal protein L32chromosome CDS248531 186 + 0.258065
rpmG BCc_051 50S ribosomal protein L33chromosome CDS57387 165 - 0.169697
rpmH BCc_005 50S ribosomal protein L34chromosome CDS7220 135 + 0.348148
rpmI BCc_080 50S ribosomal protein L35chromosome CDS88036 198 + 0.222222
rpmJ BCc_320 50S ribosomal protein L36chromosome CDS358535 117 - 0.264957
rpsA BCc_190 30S ribosomal protein S1chromosome CDS222342 1671 - 0.247756
rpsB BCc_142 30S ribosomal protein S2chromosome CDS167330 726 + 0.252066
rpsC BCc_335 30S ribosomal protein S3chromosome CDS365198 708 - 0.299435
rpsD BCc_317 30S ribosomal protein S4chromosome CDS357011 621 - 0.259259
rpsE BCc_324 30S ribosomal protein S5chromosome CDS360678 495 - 0.286869
rpsF BCc_370 30S ribosomal protein S6chromosome CDS390681 384 - 0.192708
rpsG BCc_345 30S ribosomal protein S7chromosome CDS372933 471 - 0.316348
rpsH BCc_327 30S ribosomal protein S8chromosome CDS362138 393 - 0.231552
rpsI BCc_242 30S ribosomal protein S9chromosome CDS277779 363 - 0.283747
rpsJ BCc_342 30S ribosomal protein S10chromosome CDS369022 312 - 0.323718
rpsK BCc_318 30S ribosomal protein S11chromosome CDS357665 393 - 0.3257
rpsM BCc_319 30S ribosomal protein S13chromosome CDS358076 360 - 0.258333
rpsN BCc_328 30S ribosomal protein S14chromosome CDS362584 306 - 0.303922
rpsO BCc_228 30S ribosomal protein S15chromosome CDS264891 270 - 0.214815
rpsP BCc_246 30S ribosomal protein S16chromosome CDS281409 267 + 0.209738
rpsR BCc_369 30S ribosomal protein S18chromosome CDS390395 228 - 0.258772
rpsS BCc_337 30S ribosomal protein S19chromosome CDS366275 285 - 0.280702
rpsT BCc_094 30S ribosomal protein S20chromosome CDS107181 261 + 0.16092
rpsU BCc_036 30S ribosomal protein S21chromosome CDS41306 216 - 0.296296
rsmC BCc_206 16S RNA m2G1207 methylasechromosome CDS241436 1032 + 0.159884
serS BCc_193 SerSchromosome CDS226809 1302 - 0.209677
tadA BCc_160 TadAchromosome CDS187494 462 + 0.207792
thrS BCc_078 ThrSchromosome CDS85506 1929 + 0.199585
trmD BCc_248 TrmDchromosome CDS282214 687 + 0.199418
trmU BCc_166 TrmUchromosome CDS192964 1122 + 0.188057
trpS BCc_350 TrpSchromosome CDS375256 1017 - 0.192724
truA BCc_129 TruAchromosome CDS148324 810 + 0.223457
truB BCc_229 TruBchromosome CDS265222 936 - 0.206197
tsf BCc_143 Tsfchromosome CDS168112 831 + 0.212996
tuf BCc_343 Tufchromosome CDS369501 1185 - 0.318987
tyrS BCc_075 TyrSchromosome CDS82139 1287 + 0.190365
valS BCc_223 ValSchromosome CDS255791 2856 - 0.203431
yciL BCc_174 YciLchromosome CDS202788 732 + 0.187158
yhaR BCc_225 YhaRchromosome CDS260143 366 + 0.185792
 
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS BUsg390 alanyl-tRNA synthetasechromosome CDS440181 2652 + 0.237557
argS BUsg237 arginyl-tRNA synthetasechromosome CDS273397 1743 - 0.2358
asnS BUsg348 asparaginyl-tRNA synthetasechromosome CDS393231 1401 - 0.281228
aspS BUsg306 aspartyl-tRNA synthetasechromosome CDS349957 1755 + 0.243305
cca BUsg058 tRNA nucleotidyltransferasechromosome CDS66445 1239 + 0.248588
cysS BUsg471 cysteinyl-tRNA synthetasechromosome CDS537706 1392 - 0.243534
deaD BUsg360 ATP-dependent RNA helicase DeaDchromosome CDS409915 1806 - 0.316722
def BUsg477 polypeptide deformylasechromosome CDS545791 504 + 0.234127
efp BUsg021 elongation factor Pchromosome CDS21429 564 + 0.257092
fmt BUsg478 methionyl-tRNA formyltransferasechromosome CDS546330 945 + 0.260317
frr BUsg228 ribosome recycling factorchromosome CDS258819 558 + 0.24552
ftsJ BUsg370 cell division protein FtsJchromosome CDS424732 621 - 0.278583
fusA BUsg508 elongation factor Gchromosome CDS562570 2109 - 0.323376
glnS BUsg398 glutaminyl-tRNA synthetasechromosome CDS450031 1704 + 0.238263
gltX BUsg065 glutamyl-tRNA synthetasechromosome CDS75095 1458 + 0.249657
glyQ BUsg128 glycyl-tRNA synthetase alpha subunitchromosome CDS142755 879 - 0.265074
glyS BUsg127 glyS: glycyl-tRNA synthetase beta chainchromosome CDS140651 2139 - 0.220664
gshB BUsg529 glutathione synthetasechromosome CDS584745 963 + 0.263759
hemK BUsg166 HemKchromosome CDS186370 828 + 0.247585
hisS BUsg277 histidyl-tRNA synthetasechromosome CDS315534 1287 + 0.236985
ileS BUsg142 isoleucyl-tRNA synthetasechromosome CDS157362 2817 - 0.247426
infA BUsg305 translation initiation factor IF-1chromosome CDS349547 219 + 0.287671
infB BUsg365 translation initiation factor IF-2chromosome CDS416304 2604 - 0.263825
infC BUsg118 translation initiation factor IF-3chromosome CDS132879 540 + 0.305556
ksgA BUsg134 dimethyladenosine transferasechromosome CDS148228 825 + 0.215758
leuS BUsg429 leucyl-tRNA synthetasechromosome CDS485213 2586 + 0.253287
lysS BUsg422 lysyl-tRNA synthetasechromosome CDS477625 1512 + 0.236772
map BUsg224 methionine aminopeptidasechromosome CDS255297 786 - 0.270992
metG BUsg102 methionyl-tRNA synthetasechromosome CDS114350 1638 + 0.24359
pheS BUsg121 phenylalanyl-tRNA synthetase alpha chainchromosome CDS134240 990 + 0.235354
pnp BUsg361 polyribonucleotide nucleotidyltransferasechromosome CDS412142 2124 - 0.306497
prfA BUsg165 peptide chain release factor 1chromosome CDS185288 1086 + 0.280847
prfC BUsg523 peptide chain release factor 3chromosome CDS577410 1590 - 0.274843
proS BUsg234 prolyl-tRNA synthetasechromosome CDS268140 1716 - 0.247086
pth BUsg184 peptidyl-tRNA hydrolasechromosome CDS206033 549 + 0.233151
queA BUsg124 S-adenosylmethionine:tRNA ribosyltransferasechromosome CDS138018 1074 + 0.242086
rbfA BUsg364 ribosome-binding factor Achromosome CDS415871 375 - 0.218667
rimM BUsg382 16S rRNA processing protein RimMchromosome CDS433895 528 + 0.200758
rluC BUsg336 ribosomal large subunit pseudouridine synthasechromosome CDS383734 945 + 0.261376
rluD BUsg388 ribosomal large subunit pseudouridine synthase Dchromosome CDS438286 948 - 0.270042
rne BUsg335 ribonuclease Echromosome CDS380518 2907 - 0.234606
rnpA BUsg014 ribonuclease P protein componentchromosome CDS14337 345 + 0.223188
rplA BUsg038 50S ribosomal protein L1chromosome CDS46191 696 - 0.288793
rplB BUsg502 50S ribosomal protein L2chromosome CDS558328 822 - 0.340633
rplC BUsg505 50S ribosomal protein L3chromosome CDS560087 630 - 0.315873
rplD BUsg504 50S ribosomal protein L4chromosome CDS559464 606 - 0.326733
rplE BUsg493 50S ribosomal protein L5chromosome CDS554697 540 - 0.305556
rplF BUsg490 50S ribosomal protein L6chromosome CDS553404 576 - 0.321181
rplI BUsg542 50S ribosomal protein L9chromosome CDS595163 453 - 0.260486
rplJ BUsg037 50S ribosomal protein L10chromosome CDS45446 498 - 0.269076
rplK BUsg039 50S ribosomal protein L11chromosome CDS46888 429 - 0.305361
rplL BUsg036 50S ribosomal protein L7/L12chromosome CDS45007 390 - 0.310256
rplM BUsg378 50S ribosomal protein L13chromosome CDS430157 441 - 0.260771
rplN BUsg495 50S ribosomal protein L14chromosome CDS555590 369 - 0.349593
rplO BUsg486 50S ribosomal protein L15chromosome CDS551891 435 - 0.317241
rplP BUsg498 50S ribosomal protein L16chromosome CDS556538 411 - 0.360097
rplQ BUsg479 50S ribosomal protein L17chromosome CDS547397 417 - 0.275779
rplR BUsg489 50S ribosomal protein L18chromosome CDS553037 366 - 0.29235
rplS BUsg384 50S ribosomal protein L19chromosome CDS435240 348 + 0.304598
rplT BUsg120 50S ribosomal protein L20chromosome CDS133729 357 + 0.322129
rplU BUsg374 50S ribosomal protein L21chromosome CDS427917 324 + 0.231481
rplV BUsg500 50S ribosomal protein L22chromosome CDS557682 333 - 0.324324
rplW BUsg503 50S ribosomal protein L23chromosome CDS559165 303 - 0.250825
rplX BUsg494 50S ribosomal protein L24chromosome CDS555252 315 - 0.250794
rplY BUsg131 50S ribosomal protein L25chromosome CDS145504 291 + 0.250859
rpmA BUsg375 50S ribosomal protein L27chromosome CDS428247 255 + 0.32549
rpmB BUsg079 50S ribosomal protein L28chromosome CDS87863 237 - 0.295359
rpmC BUsg497 50S ribosomal protein L29chromosome CDS556341 198 - 0.277778
rpmD BUsg487 50S ribosomal protein L30chromosome CDS552330 180 - 0.288889
rpmE BUsg556 50S ribosomal protein L31chromosome CDS612168 219 - 0.269406
rpmF BUsg337 ribosomal protein L32chromosome CDS384782 165 + 0.321212
rpmG BUsg078 50S ribosomal protein L33chromosome CDS87690 168 - 0.22619
rpmH BUsg013 50S ribosomal protein L34chromosome CDS14180 144 + 0.347222
rpmI BUsg119 50S ribosomal protein L35chromosome CDS133490 198 + 0.252525
rpmJ BUsg484 50S ribosomal protein L36chromosome CDS550411 117 - 0.34188
rpsA BUsg299 30S ribosomal protein S1chromosome CDS341938 1680 - 0.296429
rpsB BUsg225 30S ribosomal protein S2chromosome CDS256370 735 + 0.303401
rpsC BUsg499 30S ribosomal protein S3chromosome CDS556961 702 - 0.343305
rpsD BUsg481 30S ribosomal protein S4chromosome CDS548886 621 - 0.296296
rpsE BUsg488 30S ribosomal protein S5chromosome CDS552518 504 - 0.339286
rpsF BUsg544 30S ribosomal protein S6chromosome CDS595963 342 - 0.245614
rpsG BUsg509 30S ribosomal protein S7chromosome CDS564780 471 - 0.329087
rpsH BUsg491 30S ribosomal protein S8chromosome CDS553951 393 - 0.315522
rpsI BUsg377 30S ribosomal protein S9chromosome CDS429748 393 - 0.340967
rpsJ BUsg506 30S ribosomal protein S10chromosome CDS560753 312 - 0.375
rpsK BUsg482 30S ribosomal protein S11chromosome CDS549532 393 - 0.37659
rpsL BUsg510 30S ribosomal protein S12chromosome CDS565309 375 - 0.370667
rpsM BUsg483 30S ribosomal protein S13chromosome CDS549942 357 - 0.288515
rpsN BUsg492 30S ribosomal protein S14chromosome CDS554374 306 - 0.349673
rpsO BUsg362 ribosomal protein S15chromosome CDS414539 270 - 0.22963
rpsP BUsg381 ribosomal protein S16chromosome CDS433641 258 + 0.282946
rpsQ BUsg496 30S ribosomal protein S17chromosome CDS556090 255 - 0.270588
rpsR BUsg543 30S ribosomal protein S18chromosome CDS595672 228 - 0.337719
rpsS BUsg501 30S ribosomal protein S19chromosome CDS558033 279 - 0.311828
rpsT BUsg144 30S ribosomal protein S20chromosome CDS161309 270 + 0.266667
rpsU BUsg054 30S ribosomal protein S21chromosome CDS62833 216 - 0.351852
serS BUsg303 seryl-tRNA synthetasechromosome CDS346910 1284 - 0.267913
smpA BUsg180 small protein Achromosome CDS203016 315 + 0.203175
tgt BUsg125 queuine tRNA-ribosyltransferasechromosome CDS139148 1107 + 0.264679
thrS BUsg117 threonyl-tRNA synthetasechromosome CDS130947 1929 + 0.25661
trmD BUsg383 tRNA (guanine-N1)-methyltransferasechromosome CDS434413 789 + 0.259823
trmU BUsg252 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS287920 1104 + 0.248188
trpS BUsg517 tryptophanyl-tRNA synthetasechromosome CDS570794 1011 - 0.232443
truA BUsg193 tRNA pseudouridine synthase Achromosome CDS216323 792 + 0.281566
truB BUsg363 tRNA pseudouridine synthase Bchromosome CDS414910 939 - 0.268371
tsf BUsg226 elongation factor Tschromosome CDS257146 804 + 0.263682
tufB BUsg507 elongation factor Tuchromosome CDS561327 1185 - 0.351899
tyrS BUsg113 tyrosyl-tRNA synthetasechromosome CDS126368 1269 + 0.247439
valS BUsg354 valyl-tRNA synthetasechromosome CDS402181 2883 - 0.245578
ychF BUsg185 probable GTP-binding proteinchromosome CDS206655 1089 + 0.257117
yciL BUsg271 hypothetical 30.2 kDa proteinchromosome CDS307632 774 + 0.241602
yfhC BUsg246 hypothetical 20.0 kDa proteinchromosome CDS282303 456 + 0.254386
yhaR BUsg359 hypothetical proteinchromosome CDS409462 387 + 0.217054
yjjT BUsg319 hypothetical 37.6 kDa proteinchromosome CDS365092 1011 + 0.222552
yleA BUsg426 hypothetical 53.7 kDa proteinchromosome CDS482212 1320 + 0.266667
yrdC BUsg475 hypothetical 20.8 kDa proteinchromosome CDS544483 573 - 0.293194
 
Candidatus Blochmannia floridanus
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS Bfl168 alanyl-tRNA synthetasechromosome CDS201467 2676 + 0.269058
argS Bfl453 arginyl-tRNA synthetasechromosome CDS499941 1752 + 0.261986
asnS Bfl421 asparaginyl-tRNA synthetasechromosome CDS459061 1413 + 0.279547
aspS Bfl452 aspartyl-tRNA synthetasechromosome CDS497781 1731 - 0.294627
cca Bfl062 tRNA nucleotidyltransferasechromosome CDS66776 1236 - 0.305825
cysS Bfl304 cysteinyl-tRNA synthetasechromosome CDS336243 1425 + 0.271579
deaD Bfl109 Cold-shock DEAD-box protein A, inducible ATP-independent RNA helicasechromosome CDS119755 1464 + 0.28347
def Bfl219 polypeptide deformylasechromosome CDS236304 528 - 0.282197
efp Bfl072 elongation factor P (EF-P)chromosome CDS76578 564 + 0.287234
fmt Bfl218 methionyl-tRNA formyltransferasechromosome CDS235306 972 - 0.277778
frr Bfl274 ribosome recycling factorchromosome CDS298800 567 + 0.252205
ftsJ Bfl097 cell division protein 23S rRNA methyltransferase FtsJchromosome CDS105196 621 + 0.302738
fusA Bfl565 elongation factor G (EF-G)chromosome CDS633743 2130 - 0.338967
glnS Bfl324 glutaminyl-tRNA synthetasechromosome CDS356593 1671 + 0.278276
gltX Bfl504 glutamyl-tRNA synthetasechromosome CDS560267 1452 - 0.283058
glyQ Bfl020 glycine-tRNA synthetase, alpha subunitchromosome CDS20794 906 + 0.277042
glyS Bfl021 glycine-tRNA synthetase, beta subunitchromosome CDS21725 1986 + 0.259315
hemK Bfl349 putative protoporphyrinogen oxidasechromosome CDS385928 846 + 0.277778
hisS Bfl531 histidyl-tRNA synthetasechromosome CDS592107 1302 - 0.290323
ileS Bfl118 isoleucyl-tRNA synthetasechromosome CDS132130 2862 + 0.273235
infA Bfl388 initiation factor IF-1chromosome CDS428649 219 + 0.296804
infB Bfl104 translation initiation factor IF-2chromosome CDS112933 2694 + 0.302153
infC Bfl352 translation initiation factor IF-3chromosome CDS389909 528 + 0.257576
ksgA Bfl126 dimethyladenosine transferasechromosome CDS143554 816 - 0.262255
leuS Bfl313 leucyl-tRNA synthetasechromosome CDS345309 2604 - 0.286482
lysS Bfl262 lysyl-tRNA synthetasechromosome CDS280221 1458 + 0.277778
map Bfl270 methionine aminopeptidasechromosome CDS295222 795 - 0.308176
metG Bfl471 methionyl-tRNA synthetasechromosome CDS518883 1638 + 0.259463
miaA Bfl079 tRNA delta-2-isopentenylpyrophosphate (IPP) transferasechromosome CDS84768 972 + 0.290123
pheS Bfl355 phenylalanyl-tRNA synthetase alpha chainchromosome CDS391286 1008 + 0.251984
pnp Bfl108 polynucleotide phosphorylase, member of mRNA degradosomechromosome CDS117421 2094 + 0.333333
prfA Bfl348 peptide chain release factor 1 (RF-1)chromosome CDS384855 1077 + 0.286908
prfB Bfl261 peptide chain release factor 2 (RF-2)chromosome CDS279048 1098 + 0.290528
proS Bfl289 prolyl-tRNA synthetasechromosome CDS317588 1746 - 0.256586
pth Bfl345 peptidyl-tRNA hydrolasechromosome CDS381583 594 - 0.239057
queA Bfl229 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS242932 1062 + 0.274011
rbfA Bfl105 ribosome-binding factor A (P15B protein)chromosome CDS115697 354 + 0.274011
rimM Bfl174 16S rRNA processing proteinchromosome CDS206757 558 + 0.250896
rluC Bfl409 ribosomal large subunit pseudouridine synthase Cchromosome CDS449348 969 - 0.280702
rluD Bfl181 pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA)chromosome CDS213012 966 + 0.281574
rne Bfl410 ribonuclease Echromosome CDS450736 2133 + 0.277543
rnpA Bfl014 RNase P, protein componentchromosome CDS13964 363 - 0.242424
rplA Bfl560 50S ribosomal protein L1chromosome CDS630131 708 - 0.295198
rplB Bfl194 50S ribosomal protein L2chromosome CDS223151 831 + 0.354994
rplC Bfl191 50S ribosomal subunit protein L3chromosome CDS221527 660 + 0.322727
rplD Bfl192 50S ribosomal protein L4chromosome CDS222183 639 + 0.29108
rplE Bfl203 50S ribosomal subunit protein L5chromosome CDS227197 573 + 0.298429
rplF Bfl206 50S ribosomal protein L6chromosome CDS228550 546 + 0.294872
rplI Bfl087 50S ribosomal subunit protein L9chromosome CDS93152 486 + 0.271605
rplJ Bfl559 50S ribosomal subunit protein L10chromosome CDS629316 498 - 0.271084
rplK Bfl561 50S ribosomal subunit protein L11chromosome CDS630835 441 - 0.315193
rplL Bfl558 50S ribosomal subunit protein L7/L12chromosome CDS628841 381 - 0.333333
rplM Bfl049 50S ribosomal protein L13chromosome CDS55306 420 + 0.280952
rplN Bfl201 50S ribosomal subunit protein L14chromosome CDS226450 372 + 0.336022
rplO Bfl210 50S ribosomal subunit protein L15chromosome CDS230238 444 + 0.326577
rplP Bfl198 50S ribosomal protein L16chromosome CDS225456 402 + 0.348259
rplQ Bfl217 50S ribosomal subunit protein L17chromosome CDS234854 378 + 0.267196
rplR Bfl207 50S ribosomal subunit protein L18chromosome CDS229150 354 + 0.316384
rplS Bfl176 50S ribosomal protein L19chromosome CDS208123 354 + 0.276836
rplT Bfl354 50S ribosomal protein L20chromosome CDS390826 357 + 0.305322
rplU Bfl093 50S ribosomal subunit protein L21chromosome CDS102286 384 + 0.278646
rplV Bfl196 50S ribosomal subunit protein L22chromosome CDS224342 330 + 0.29697
rplW Bfl193 50S ribosomal subunit protein L23chromosome CDS222830 300 + 0.27
rplX Bfl202 50S ribosomal subunit protein L24chromosome CDS226853 321 + 0.292835
rplY Bfl473 50s ribosomal protein L25chromosome CDS521617 312 + 0.266026
rpmA Bfl094 50S ribosomal protein L27chromosome CDS102659 258 + 0.341085
rpmB Bfl612 50S ribosomal subunit protein L28chromosome CDS679697 240 - 0.245833
rpmC Bfl199 50S ribosomal subunit protein L29chromosome CDS225862 201 + 0.199005
rpmD Bfl209 50S ribosomal subunit protein L30chromosome CDS230055 177 + 0.333333
rpmE Bfl599 50S ribosomal protein L31chromosome CDS667500 222 - 0.297297
rpmF Bfl408 50S ribosomal protein L32chromosome CDS448730 171 - 0.292398
rpmG Bfl611 50S ribosomal subunit protein L33chromosome CDS679527 162 - 0.228395
rpmH Bfl015 50s ribosomal protein l34chromosome CDS14374 141 - 0.35461
rpmI Bfl353 50S ribosomal subunit protein L35chromosome CDS390531 198 + 0.262626
rpmJ Bfl212 50S ribosomal subunit protein L36chromosome CDS232091 117 + 0.34188
rpsA Bfl380 30S ribosomal protein S1chromosome CDS416978 1728 - 0.302662
rpsB Bfl271 30S ribosomal protein S2chromosome CDS296283 696 + 0.303161
rpsC Bfl197 30S ribosomal subunit protein S3chromosome CDS224731 708 + 0.337571
rpsD Bfl215 30S ribosomal protein S4chromosome CDS233135 624 + 0.3125
rpsE Bfl208 30S ribosomal subunit protein S5chromosome CDS229516 534 + 0.359551
rpsF Bfl085 30S ribosomal protein S6chromosome CDS92399 363 + 0.236915
rpsG Bfl566 30S ribosomal protein S7chromosome CDS635980 474 - 0.362869
rpsH Bfl205 30S ribosomal subunit protein S8chromosome CDS228132 396 + 0.30303
rpsI Bfl050 30S ribosomal subunit protein S9chromosome CDS55796 393 + 0.335878
rpsJ Bfl190 30S ribosomal protein S10chromosome CDS221115 312 + 0.349359
rpsK Bfl214 30S ribosomal protein S11chromosome CDS232707 393 + 0.391858
rpsL Bfl567 30S ribosomal protein S12chromosome CDS636601 375 - 0.376
rpsM Bfl213 30S ribosomal protein S13chromosome CDS232287 357 + 0.336134
rpsN Bfl204 30S ribosomal subunit protein S14chromosome CDS227775 306 + 0.352941
rpsO Bfl107 30S ribosomal subunit protein S15chromosome CDS116984 273 + 0.25641
rpsP Bfl173 30S ribosomal subunit protein S16chromosome CDS206462 249 + 0.305221
rpsQ Bfl200 30S ribosomal subunit protein S17chromosome CDS226109 258 + 0.251938
rpsR Bfl086 30S ribosomal subunit protein S18chromosome CDS92839 237 + 0.320675
rpsS Bfl195 30S ribosomal subunit protein S19chromosome CDS224008 282 + 0.336879
rpsT Bfl116 30S ribosomal protein S20chromosome CDS130753 267 - 0.258427
rpsU Bfl058 30S ribosomal subunit protein S21chromosome CDS63622 216 - 0.282407
serS Bfl384 seryl-tRNA synthetasechromosome CDS422339 1311 - 0.279939
smpA Bfl546 small membrane protein Achromosome CDS609173 348 + 0.235632
tgt Bfl230 queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylasechromosome CDS244122 1137 + 0.306948
thrS Bfl351 threonyl-tRNA synthetasechromosome CDS388653 1233 + 0.274939
trmD Bfl175 tRNA(guanine-N1)methyltransferasechromosome CDS207348 747 + 0.30656
trmU Bfl392 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS433593 1110 + 0.286486
trpS Bfl569 tryptophanyl-tRNA synthetasechromosome CDS638471 1005 - 0.291542
truA Bfl496 tRNA pseudouridine synthase Achromosome CDS550522 759 - 0.328063
truB Bfl106 tRNA pseudouridine 5S synthasechromosome CDS116087 768 + 0.268229
tsf Bfl272 elongation factor Tschromosome CDS297058 810 + 0.271605
tuf Bfl564 elongation factor Tu (EF-Tu)chromosome CDS632459 1185 - 0.36962
tyrS Bfl371 tyrosyl-tRNA synthetasechromosome CDS406416 1269 + 0.252167
valS Bfl033 valyl-tRNA synthetasechromosome CDS38360 2901 - 0.261979
ychF Bfl344 putative ATP/GTP-binding proteinchromosome CDS380411 1047 - 0.243553
yfcB Bfl499 hypothetical proteinchromosome CDS554680 912 + 0.29386
yfhC Bfl537 putative cytosine/adenosine deaminasechromosome CDS600704 480 - 0.308333
yjfH Bfl084 probable tRNA/rRNA methyltransferasechromosome CDS91405 765 + 0.308497
yjgF Bfl031 putative translation initiation inhibitorchromosome CDS36578 417 - 0.2494
yrdC Bfl220 hypothetical proteinchromosome CDS237099 570 + 0.317544
 
Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS BPEN_174 alanyl-tRNA synthetasechromosome CDS222183 2640 + 0.297348
argS BPEN_468 arginyl-tRNA synthetasechromosome CDS559209 1746 + 0.290378
asnS BPEN_433 asparaginyl-tRNA synthetasechromosome CDS508697 1413 + 0.314225
aspS BPEN_467 aspartyl-tRNA synthetasechromosome CDS556853 1725 - 0.310725
cca BPEN_064 tRNA nucleotidyltransferasechromosome CDS75623 1227 - 0.336593
cysS BPEN_312 cysteinyl-tRNA synthetasechromosome CDS369936 1422 + 0.292546
deaD BPEN_113 cold-shock DeaD box ATP-dependent RNA helicasechromosome CDS133041 1710 + 0.31462
def BPEN_226 polypeptide deformylasechromosome CDS257858 522 - 0.250958
efp BPEN_074 elongation factor Pchromosome CDS87508 567 + 0.319224
fmt BPEN_225 methionyl-tRNA formyltransferasechromosome CDS256879 969 - 0.335397
frr BPEN_282 ribosome recycling factorchromosome CDS327793 567 + 0.271605
fusA BPEN_585 elongation factor Gchromosome CDS702056 2115 - 0.365012
glnS BPEN_332 glutaminyl-tRNA synthetasechromosome CDS392299 1659 + 0.312839
gltX BPEN_521 glutamate tRNA synthetase, catalytic subunitchromosome CDS623765 1407 - 0.307747
glyQ BPEN_019 glycine-tRNA synthetase, alpha subunitchromosome CDS21218 915 + 0.311475
glyS BPEN_020 glycine-tRNA synthetase, beta subunitchromosome CDS22156 2088 + 0.291667
hemK BPEN_360 N5-glutamine methyltransferasechromosome CDS425049 837 + 0.314217
hisS BPEN_550 histidyl-tRNA synthetasechromosome CDS658032 1317 - 0.312073
ileS BPEN_122 isoleucyl-tRNA synthetasechromosome CDS146107 2829 + 0.323789
infA BPEN_399 translation initiation factor IF-1chromosome CDS472511 219 + 0.342466
infB BPEN_108 translation initiation factor IF2-2chromosome CDS125595 2676 + 0.341928
infC BPEN_363 translation initiation factor IF-3chromosome CDS430465 540 + 0.333333
ksgA BPEN_130 dimethyladenosine transferasechromosome CDS158188 804 - 0.282338
leuS BPEN_321 leucyl-tRNA synthetasechromosome CDS379823 2619 - 0.323788
lysS BPEN_270 lysyl-tRNA synthetasechromosome CDS307702 1530 + 0.303268
map BPEN_278 methionine aminopeptidasechromosome CDS324077 783 - 0.325671
metG BPEN_486 methionyl-tRNA synthetasechromosome CDS579039 1668 + 0.318345
miaA BPEN_081 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS96505 915 + 0.31694
pheS BPEN_366 phenylalanine tRNA synthetase, alpha-subunitchromosome CDS431885 996 + 0.296185
pnp BPEN_112 polynucleotide phosphorylasechromosome CDS130316 2100 + 0.338095
prfA BPEN_359 peptide chain release factor 1 (RF-1)chromosome CDS423967 1083 + 0.34349
prfB BPEN_269 peptide chain release factor 2 (RF-2)chromosome CDS306663 1047 + 0.315186
proS BPEN_297 prolyl-tRNA synthetasechromosome CDS346510 1746 - 0.310424
pth BPEN_355 peptidyl-tRNA hydrolasechromosome CDS419924 594 - 0.279461
rbfA BPEN_109 30S ribosome-binding factorchromosome CDS128361 360 + 0.291667
rimM BPEN_180 16S rRNA processing proteinchromosome CDS227396 570 + 0.294737
rlmB BPEN_087 probable tRNA/rRNA methyltransferasechromosome CDS103280 744 + 0.342742
rluC BPEN_421 ribosomal large subunit (23S) pseudouridine synthase Cchromosome CDS496794 1017 - 0.282203
rluD BPEN_187 pseudouridine synthasechromosome CDS234005 1032 + 0.312016
rmpH BPEN_014 50S ribosomal subunit protein L34chromosome CDS14666 153 - 0.392157
rmpJ BPEN_219 50S ribosomal subunit protein L36chromosome CDS253758 117 + 0.367521
rne BPEN_422 ribonuclease Echromosome CDS498327 2601 + 0.318724
rnpA BPEN_013 RNase P, protein componentchromosome CDS14295 348 - 0.310345
rplA BPEN_580 50S ribosomal subunit protein L1chromosome CDS698574 708 - 0.30791
rplB BPEN_201 50S ribosomal protein L2chromosome CDS244971 828 + 0.390097
rplC BPEN_198 50S ribosomal subunit protein L3chromosome CDS243362 654 + 0.345566
rplD BPEN_199 50S ribosomal protein L4chromosome CDS244016 633 + 0.314376
rplE BPEN_210 50S ribosomal subunit protein L5chromosome CDS248969 540 + 0.309259
rplF BPEN_213 50S ribosomal protein L6chromosome CDS250263 567 + 0.335097
rplI BPEN_090 50S ribosomal subunit protein L9chromosome CDS105066 462 + 0.307359
rplJ BPEN_579 50S ribosomal subunit protein L10chromosome CDS697734 492 - 0.313008
rplK BPEN_581 50S ribosomal subunit protein L11chromosome CDS699287 432 - 0.333333
rplL BPEN_578 50S ribosomal subunit protein L7/L12chromosome CDS697272 369 - 0.341463
rplM BPEN_050 50S ribosomal subunitprotein L13chromosome CDS61354 435 + 0.314943
rplN BPEN_208 50S ribosomal subunit protein L14chromosome CDS248249 372 + 0.376344
rplO BPEN_217 50S ribosomal subunit protein L15chromosome CDS251937 435 + 0.370115
rplP BPEN_205 50S ribosomal protein L16chromosome CDS247241 405 + 0.37037
rplQ BPEN_224 50S ribosomal subunit protein L17chromosome CDS256441 378 + 0.31746
rplR BPEN_214 50S ribosomal subunit protein L18chromosome CDS250861 354 + 0.327684
rplS BPEN_182 50S ribosomal protein L19chromosome CDS228767 351 + 0.336182
rplT BPEN_365 50S ribosomal subunit protein L20chromosome CDS431338 363 + 0.349862
rplU BPEN_096 50S ribosomal subunit protein L21chromosome CDS114559 318 + 0.31761
rplV BPEN_203 50S ribosomal subunit protein L22chromosome CDS246156 330 + 0.306061
rplW BPEN_200 50S ribosomal subunit protein L23chromosome CDS244645 303 + 0.287129
rplX BPEN_209 50S ribosomal subunit protein L24chromosome CDS248636 321 + 0.28972
rplY BPEN_488 50S ribosomal subunit protein L25chromosome CDS583227 294 + 0.295918
rpmA BPEN_097 50S ribosomal protein L27chromosome CDS114922 255 + 0.380392
rpmB BPEN_636 50S ribosomal subunit protein L28chromosome CDS759889 228 - 0.372807
rpmC BPEN_206 50S ribosomal subunit protein L29chromosome CDS247645 213 + 0.234742
rpmE BPEN_621 50S ribosomal subunit protein L31chromosome CDS743051 249 - 0.269076
rpmF BPEN_420 50S ribosomal subunit protein L32chromosome CDS495727 171 - 0.415205
rpmG BPEN_635 50S ribosomal subunit protein L33chromosome CDS759697 168 - 0.285714
rpmI BPEN_364 50S ribosomal subunit protein L35chromosome CDS431067 198 + 0.252525
rpsA BPEN_391 30S ribosomal protein S1chromosome CDS459768 1695 - 0.343953
rpsB BPEN_279 30S ribosomal protein S2chromosome CDS325186 687 + 0.3377
rpsC BPEN_204 30S ribosomal subunit protein S3chromosome CDS246519 711 + 0.372714
rpsD BPEN_222 30S ribosomal protein S4chromosome CDS254750 624 + 0.328526
rpsE BPEN_215 30S ribosomal subunit protein S5chromosome CDS251230 525 + 0.352381
rpsF BPEN_088 30S ribosomal subunit protein S6chromosome CDS104194 354 + 0.30226
rpsG BPEN_586 30S ribosomal protein S7chromosome CDS704294 471 - 0.375796
rpsH BPEN_212 30S ribosomal subunit protein S8chromosome CDS249878 396 + 0.315657
rpsI BPEN_051 30S ribosomal subunit protein S9chromosome CDS61816 399 + 0.35589
rpsJ BPEN_197 30S ribosomal subunit protein S10chromosome CDS242945 312 + 0.403846
rpsK BPEN_221 30S ribosomal protein S11chromosome CDS254320 393 + 0.414758
rpsL BPEN_587 30S ribosomal subunit protein S12chromosome CDS704916 375 - 0.418667
rpsM BPEN_220 30S ribosomal protein S13chromosome CDS253923 366 + 0.374317
rpsN BPEN_211 30S ribosomal subunit protein S14chromosome CDS249541 306 + 0.382353
rpsO BPEN_111 30S ribosomal subunit protein S15chromosome CDS129869 270 + 0.3
rpsP BPEN_179 30S ribosomal subunit protein S16chromosome CDS227157 243 + 0.329218
rpsQ BPEN_207 30S ribosomal subunit protein S17chromosome CDS247872 255 + 0.298039
rpsR BPEN_089 30S ribosomal subunit protein S18chromosome CDS104772 240 + 0.3625
rpsS BPEN_202 30S ribosomal subunit protein S19chromosome CDS245825 282 + 0.35461
rpsT BPEN_120 30S ribosomal subunit protein S20chromosome CDS144617 267 - 0.35206
rpsU BPEN_059 30S ribosomal subunit protein S21chromosome CDS71861 216 - 0.319444
rrmJ BPEN_100 Ribosomal RNA large subunit (23S) methyltransferase Jchromosome CDS117742 627 + 0.365231
serS BPEN_395 seryl-tRNA synthetasechromosome CDS465241 1287 - 0.334887
smpA BPEN_566 small membrane protein Achromosome CDS676582 339 + 0.283186
tadA BPEN_557 tRNA-specific adenosine deaminasechromosome CDS667443 468 - 0.348291
tgt BPEN_236 tRNA-guanine transglycosylasechromosome CDS266542 1107 + 0.33785
thrS BPEN_362 threonyl-tRNA synthetasechromosome CDS429232 1227 + 0.312958
tolA BPEN_347 TolAchromosome CDS410688 1185 + 0.332489
trmD BPEN_181 tRNA(guanine-N1)methyltransferasechromosome CDS227992 768 + 0.339844
trmU BPEN_404 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS479466 1104 + 0.327899
trpS BPEN_589 tryptophanyl-tRNA synthetasechromosome CDS708033 999 - 0.288288
truA BPEN_512 tRNA pseudouridine synthase Achromosome CDS613072 786 - 0.361323
truB BPEN_110 tRNA pseudouridine 5S synthasechromosome CDS128757 783 + 0.320562
tsf BPEN_280 elongation factor Tschromosome CDS325958 819 + 0.290598
tuf BPEN_584 elongation factor Tuchromosome CDS700810 1185 - 0.372996
tyrS BPEN_382 tyrosyl-tRNA synthetasechromosome CDS448260 1284 + 0.301402
valS BPEN_033 valine tRNA synthetasechromosome CDS40789 2874 - 0.30167
ychF BPEN_354 putative GTP-binding protein with nucleoside triP hydrolase domainchromosome CDS418754 1077 - 0.290622
yfcB BPEN_515 N5-glutamine methyltransferase, modifies ribosomal protein L3chromosome CDS617740 915 + 0.311475
yjgF BPEN_031 putative translation initiation inhibitorchromosome CDS39009 402 - 0.318408
yrdC BPEN_227 putative RNA-binding protein with unique protein fold, with YrdC/RibB domainchromosome CDS258767 585 + 0.347009
 
Enterobacteria phage Fels-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STM2534 putative cytoplasmic proteinchromosome CDS2673995 669 + 0.446936
NA STM3598 putative L-asparaginasechromosome CDS3769992 1044 - 0.51341
NA STM1550 putative cytoplasmic proteinchromosome CDS1626565 285 - 0.421053
NA STM2133 putative cytoplasmic proteinchromosome CDS2225846 885 + 0.500565
NA STM3521 putative ribonucleoprotein related-proteinchromosome CDS3683125 1554 - 0.60296
NA STM2566 putative periplasmic proteinchromosome CDS2712163 234 + 0.461538
NA STM1549 putative translation initiation inhibitorchromosome CDS1626005 390 - 0.497436
NA STM0080 putative outer membrane lipoproteinchromosome CDS93607 231 + 0.484848
NA STM1873 hypothetical proteinchromosome CDS1968296 354 - 0.533898
NA STM4032.2N hypothetical proteinchromosome CDS4241636 312 + 0.442308
NA STM2545 putative rRNA methylasechromosome CDS2683585 732 - 0.568306
NA STM1548.s putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerasechromosome CDS1624874 1080 + 0.385185
NA STM0926 putative minor tail proteinchromosome CDS999070 2373 + 0.582385
NA STM4450 putative inner membrane proteinchromosome CDS4691680 285 + 0.470175
alaS STM2827 alanyl-tRNA synthetasechromosome CDS2971371 2631 - 0.549221
ansA STM1294 cytoplasmic asparaginase Ichromosome CDS1371798 1017 - 0.528024
ansB STM3106 periplasmic L-asparaginase IIchromosome CDS3265481 1047 - 0.526266
argS STM1909 arginyl-tRNA synthetasechromosome CDS2002597 1734 + 0.551903
asnS STM1000 asparaginyl-tRNA synthetasechromosome CDS1091479 1401 - 0.551035
aspS STM1901 aspartyl-tRNA synthetasechromosome CDS1995111 1773 - 0.566272
cafA STM3370 RNase Gchromosome CDS3539847 1470 - 0.527211
cca STM3204 tRNA nucleotidyl transferasechromosome CDS3369221 1242 + 0.586151
cysS STM0537 cysteinyl-tRNA synthetasechromosome CDS599135 1386 + 0.549062
dbpA STM1655 ATP-dependent RNA helicasechromosome CDS1748288 1374 - 0.55313
deaD STM3280.S cysteine sulfinate desulfinasechromosome CDS3446185 1890 - 0.583069
def STM3406 peptide deformylasechromosome CDS3576936 510 + 0.511765
efp STM4334 elongation factor Pchromosome CDS4579610 567 + 0.522046
fmt STM3407 methionyl-tRNA formyltransferasechromosome CDS3577461 948 + 0.548523
frr STM0219 ribosome releasing factorchromosome CDS257148 558 + 0.510753
ftsJ STM3297 23S rRNA methyltransferasechromosome CDS3466728 627 - 0.515152
fusA STM3446 elongation factor EF-2chromosome CDS3599558 2115 - 0.516785
glnS STM0686 glutaminyl-tRNA synthetasechromosome CDS747421 1668 + 0.534173
gltX STM2415 glutamyl-tRNA synthetasechromosome CDS2530163 1416 - 0.552966
glyQ STM3656 glycyl-tRNA synthetase alpha subunitchromosome CDS3841849 912 - 0.558114
glyS STM3655 glycyl-tRNA synthetase beta subunitchromosome CDS3839770 2070 - 0.570048
gshB STM3095 glutathione synthetasechromosome CDS3256939 948 + 0.545359
hemK STM1775 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1872498 834 - 0.58753
hisS STM2522 histidyl-tRNA synthetasechromosome CDS2654871 1275 - 0.562353
ileS STM0046 isoleucyl-tRNA synthetasechromosome CDS53855 2835 + 0.547795
infA STM0953 translation initiation factor IF-1chromosome CDS1030347 219 - 0.488584
infB STM3286 translation initiation factor IF-2chromosome CDS3453610 2679 - 0.554311
infC STM1334.c translation initiation factor IF-3chromosome CDS1414134 543 + 0.475138
ksgA STM0090 dimethyladenosine transferasechromosome CDS102663 822 - 0.524331
lasT STM4600 putative tRNA/tRNA methyltransferasechromosome CDS4856722 687 + 0.525473
leuS STM0648 leucyl-tRNA synthetasechromosome CDS709125 2583 - 0.557878
ligT STM0188 2'-5' RNA ligasechromosome CDS217751 531 - 0.629002
lysS STM3040 lysyl-tRNA synthetasechromosome CDS3199219 1518 - 0.540843
map STM0215 methionine aminopeptidasechromosome CDS253052 795 - 0.524528
miaA STM4360 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4603542 951 + 0.543638
miaB STM0670 rRNA modification proteinchromosome CDS734487 1425 - 0.538947
miaE STM4471 hydroxylasechromosome CDS4713345 813 + 0.543665
pcnB STM0184 polyA polymerase Ichromosome CDS213874 1419 - 0.561663
pheS STM1337 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1415678 984 + 0.538618
pnp STM3282 polynucleotide phosphorylasechromosome CDS3449247 2136 - 0.562734
prfA STM1776 peptide chain release factor 1chromosome CDS1873331 1083 - 0.575254
prfB STM3041c peptide chain release factor 2chromosome CDS3200746 1077 - 0.543175
prfC STM4560 peptide chain release factor 3chromosome CDS4813888 1590 + 0.543396
prfH STM0315 peptide chain release factor 2chromosome CDS360203 615 + 0.55122
prmA STM3383 ribosomal protein L11 methyltransferasechromosome CDS3553729 882 + 0.558957
proS STM0242 prolyl-tRNA synthetasechromosome CDS282467 1719 - 0.547411
pth STM1783.S peptidyl-tRNA hydrolasechromosome CDS1881117 585 + 0.517949
queA STM0404 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS459560 1065 + 0.558685
rbfA STM3285 ribosome-binding factor Achromosome CDS3452988 402 - 0.529851
rfbF STM2092 glucose-1-phosphate cytidylyltransferasechromosome CDS2173350 774 - 0.435401
rhlB STM3914 ATP-dependent RNA helicasechromosome CDS4123427 1266 - 0.547393
rhlE STM0820 putative ATP-dependent RNA helicasechromosome CDS885586 1365 + 0.58315
rimJ STM1167 acetylatasechromosome CDS1252507 585 + 0.511111
rimK STM0875 ribosomal protein S6 modification proteinchromosome CDS946561 903 + 0.563677
rimL STM1611 acetyl transferasechromosome CDS1701042 540 - 0.503704
rimM STM2675 16S rRNA-processing proteinchromosome CDS2816073 549 - 0.500911
rluA STM0095 23S rRNA pseudouridylate 746 synthasechromosome CDS109331 660 - 0.571212
rluC STM1187 23S rRNA pseudouridylate synthasechromosome CDS1272131 960 + 0.553125
rluD STM2662 ribosomal large subunit pseudouridine synthase Dchromosome CDS2805547 981 - 0.53211
rmf STM1066 ribosome modulation factorchromosome CDS1157641 168 + 0.535714
rna STM0617 RNase Ichromosome CDS679989 807 - 0.547708
rnd STM1817 RNase Dchromosome CDS1914022 1128 - 0.550532
rne STM1185 RNase Echromosome CDS1268354 3204 - 0.58427
rnpA STM3840 ribonuclease Pchromosome CDS4045842 360 + 0.561111
rph STM3734 ribonuclease PHchromosome CDS3926679 717 - 0.549512
rplA STM4150 50S ribosomal protein L1chromosome CDS4363537 705 + 0.531915
rplB STM3437 50S ribosomal protein L2chromosome CDS3593803 822 - 0.53163
rplC STM3440 50S ribosomal protein L3chromosome CDS3595557 630 - 0.51746
rplD STM3439 50S ribosomal protein L4chromosome CDS3594941 606 - 0.531353
rplE STM3428 50S ribosomal protein L5chromosome CDS3590160 540 - 0.494444
rplF STM3425 50S ribosomal protein L6chromosome CDS3588868 534 - 0.516854
rplI STM4394 50S ribosomal protein L9chromosome CDS4631504 450 + 0.508889
rplJ STM4151 50S ribosomal protein L10chromosome CDS4364661 498 + 0.52008
rplK STM4149 50S ribosomal protein L11chromosome CDS4363105 429 + 0.526807
rplL STM4152 50S ribosomal protein L7/L12chromosome CDS4365225 366 + 0.461749
rplM STM3345 50S ribosomal protein L13chromosome CDS3512814 429 - 0.512821
rplN STM3430 50S ribosomal protein L14chromosome CDS3591039 372 - 0.5
rplO STM3421 50S ribosomal protein L15chromosome CDS3587366 435 - 0.544828
rplP STM3433 50S ribosomal protein L16chromosome CDS3592019 411 - 0.523114
rplQ STM3414 50S ribosomal protein L17chromosome CDS3582877 384 - 0.544271
rplR STM3424 50S ribosomal protein L18chromosome CDS3588505 354 - 0.531073
rplS STM2673 50S ribosomal protein L19chromosome CDS2814873 348 - 0.485632
rplT STM1336 50S ribosomal protein L20chromosome CDS1415020 357 + 0.498599
rplU STM3304 50S ribosomal protein L21chromosome CDS3472778 312 - 0.490385
rplV STM3435 50S ribosomal protein L22chromosome CDS3593161 333 - 0.501502
rplW STM3438 50S ribosomal protein L23chromosome CDS3594642 303 - 0.491749
rplX STM3429 50S ribosomal protein L24chromosome CDS3590714 315 - 0.460317
rplY STM2224 50S ribosomal protein L25chromosome CDS2326433 285 + 0.512281
rpmA STM3303 50S ribosomal protein L27chromosome CDS3472501 258 - 0.496124
rpmB STM3728 50S ribosomal protein L28chromosome CDS3922226 237 - 0.518987
rpmC STM3432 50S ribosomal protein L29chromosome CDS3591828 192 - 0.53125
rpmD STM3422 50S ribosomal protein L30chromosome CDS3587804 180 - 0.505556
rpmE STM4096 50S ribosomal protein L31chromosome CDS4305763 213 + 0.488263
rpmE2 STM0469 50S ribosomal protein L31chromosome CDS526352 261 + 0.440613
rpmF STM1191 50S ribosomal protein L32chromosome CDS1275846 174 + 0.528736
rpmG STM3727 50S ribosomal protein L33chromosome CDS3922038 168 - 0.39881
rpmH STM3839 50S ribosomal protein L34chromosome CDS4045685 141 + 0.524823
rpmI STM1335 50S ribosomal protein L35chromosome CDS1414772 198 + 0.489899
rpmJ STM3419 50S ribosomal protein L36chromosome CDS3585879 117 - 0.478632
rpmJ2 STM0470 50S ribosomal protein L36chromosome CDS526618 141 + 0.432624
rpsA STM0981 30S ribosomal protein S1chromosome CDS1065791 1674 + 0.510155
rpsB STM0216 30S ribosomal protein S2chromosome CDS254297 726 + 0.509642
rpsC STM3434 30S ribosomal protein S3chromosome CDS3592442 702 - 0.511396
rpsD STM3416 30S ribosomal protein S4chromosome CDS3584316 621 - 0.512077
rpsE STM3423 30S ribosomal protein S5chromosome CDS3587987 504 - 0.505952
rpsF STM4391 30S ribosomal protein S6chromosome CDS4630514 396 + 0.530303
rpsG STM3447 30S ribosomal protein S7chromosome CDS3601769 471 - 0.496815
rpsH STM3426 30S ribosomal protein S8chromosome CDS3589414 393 - 0.501272
rpsI STM3344 30S ribosomal protein S9chromosome CDS3512406 393 - 0.531807
rpsJ STM3441 30S ribosomal protein S10chromosome CDS3596219 312 - 0.548077
rpsK STM3417 30S ribosomal protein S11chromosome CDS3584970 390 - 0.515385
rpsL STM3448 30S ribosomal protein S12chromosome CDS3602335 375 - 0.528
rpsM STM3418 30S ribosomal protein S13chromosome CDS3585376 357 - 0.52381
rpsN STM3427.S 30S ribosomal subunit protein S14chromosome CDS3589840 291 - 0.52921
rpsO STM3283 30S ribosomal protein S15chromosome CDS3451624 270 - 0.5
rpsP STM2676 30S ribosomal protein S16chromosome CDS2816640 249 - 0.522088
rpsQ STM3431 30S ribosomal protein S17chromosome CDS3591574 255 - 0.478431
rpsR STM4393 30S ribosomal protein S18chromosome CDS4631235 228 + 0.52193
rpsS STM3436 30S ribosomal protein S19chromosome CDS3593508 279 - 0.491039
rpsT STM0043 30S ribosomal protein S20chromosome CDS52280 264 - 0.465909
rpsU STM3209 30S ribosomal protein S21chromosome CDS3374055 216 + 0.518519
rsmC STM4556 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4811138 1029 - 0.5724
rsuA STM2222 16S rRNA pseudouridylate 516 synthasechromosome CDS2323701 696 - 0.543103
rumA STM2957 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3105166 1296 - 0.543981
selB STM3682 selenocysteinyl-tRNA-specific translation factorchromosome CDS3870846 1851 - 0.571043
serS STM0963 seryl-tRNA synthetasechromosome CDS1043792 1293 + 0.540603
smpA STM2685 small membrane protein Achromosome CDS2825074 339 + 0.516224
speG STM1502 spermidine N1-acetyltransferasechromosome CDS1580710 561 - 0.481283
spoU STM3743 putative tRNA/rRNA methyltransferasechromosome CDS3936186 690 + 0.544928
srmB STM2643 ATP-dependent RNA helicasechromosome CDS2782903 1335 + 0.543071
stbD STM0337 putative fimbrial usherchromosome CDS379705 1326 - 0.521116
sun STM3408 putative rRNA methylasechromosome CDS3578460 1290 + 0.536434
tgt STM0405 queuine tRNA-ribosyltransferasechromosome CDS460821 1128 + 0.524823
thrS STM1333 threonyl-tRNA synthetasechromosome CDS1412202 1929 + 0.504925
trmA STM4129 tRNA (uracil-5-)-methyltransferasechromosome CDS4346636 1101 - 0.519528
trmD STM2674 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2815261 768 - 0.540365
trmU STM1234.S tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1321589 1107 - 0.542909
trpS STM3481 tryptophanyl-tRNA synthetasechromosome CDS3636247 1005 - 0.518408
trpS2 STM4508 tryptophanyl-tRNA synthetasechromosome CDS4761826 1014 - 0.529586
truA STM2368 tRNA pseudouridine synthase Achromosome CDS2480462 813 - 0.555966
truB STM3284 tRNA pseudouridine synthase Bchromosome CDS3452044 945 - 0.555556
tsf STM0217 elongation factor Tschromosome CDS255280 852 + 0.525822
tuf STM3445 elongation factor Tuchromosome CDS3598302 1185 - 0.540084
tuf STM4146 elongation factor Tuchromosome CDS4360603 1185 + 0.540084
tyrS STM1449 tyrosyl-tRNA synthetasechromosome CDS1523487 1275 + 0.528627
valS STM4475 valyl-tRNA synthetasechromosome CDS4717013 2856 - 0.570728
yadB STM0185 glutamyl-tRNA synthetasechromosome CDS215433 942 - 0.578556
yaeJ STM0240 hypothetical proteinchromosome CDS281234 423 + 0.550827
ybfE STM0695 putative SOS response proteinchromosome CDS757809 294 - 0.527211
ybjF STM0882 23S rRNA (uracil-5-)-methyltransferasechromosome CDS953113 1131 + 0.557913
ychF STM1784 putative GTP-binding proteinchromosome CDS1881818 1092 + 0.528388
yciH STM1706 hypothetical proteinchromosome CDS1800261 327 - 0.464832
yciL STM1719 putative ribosomal large subunit pseudouridine synthasechromosome CDS1815804 876 - 0.568493
yciO STM1720 putative dsRNA-binding proteinchromosome CDS1816780 621 - 0.52496
yeiP STM2211.S elongation factor Pchromosome CDS2310724 573 + 0.509599
yfbG STM2299 hypothetical proteinchromosome CDS2406093 1983 + 0.541604
yfcB STM2385 putative methylasechromosome CDS2495662 933 - 0.531618
yfhC STM2568 putative cytosine/adenosine deaminasechromosome CDS2713992 552 - 0.567029
yfiA STM2665 ribosome stabilization factorchromosome CDS2807668 339 + 0.471976
yfiF STM2648 putative tRNA/rRNA methyltransferasechromosome CDS2787413 1038 - 0.569364
ygjO STM3220 putative methyltransferasechromosome CDS3388354 1137 - 0.537379
yhbH STM3321 putative sigma N modulation factorchromosome CDS3485866 288 + 0.458333
yhbY STM3298.S putative RNA-binding proteinchromosome CDS3467481 294 + 0.482993
yhdG STM3384 possible dehydrogenasechromosome CDS3555271 966 + 0.536232
yhjN STM3618 putative cellulose synthasechromosome CDS3798531 2301 - 0.568883
yibK STM3695 putative tRNA/rRNA methyltransferasechromosome CDS3889591 474 + 0.563291
yihZ STM4028 D-tyrosyl-tRNA deacylasechromosome CDS4238211 438 + 0.563927
yjbC STM4193 putative pseudouridine synthasechromosome CDS4415479 870 + 0.503448
yjbN STM4243 hypothetical proteinchromosome CDS4463960 999 + 0.555556
yjeA STM4344 lysyl-tRNA synthetasechromosome CDS4586095 978 + 0.537832
yjfH STM4369 putative tRNA/rRNA methyltransferasechromosome CDS4613593 732 + 0.575137
yjgF STM4458 putative translation initiation inhibitorchromosome CDS4703033 387 - 0.54522
yliG STM0852 putative FeS oxidoreductasechromosome CDS923529 1326 - 0.541478
ymfC STM1237 putative ribosomal large subunit pseudouridine synthasechromosome CDS1323548 666 - 0.528529
yoaB STM1822 putative translation initiation inhibitorchromosome CDS1920559 345 + 0.510145
yohI STM2174 putative regulatory proteinchromosome CDS2270724 939 - 0.57295
yqcB STM2964 putative pseudouridylate synthasechromosome CDS3115544 783 - 0.583653
yrdC STM3402 putative dsRNA-binding proteinchromosome CDS3574089 573 - 0.535777
yrfH STM3497 heat shock proteinchromosome CDS3653063 402 + 0.562189
 
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA1651 hypothetical proteinchromosome CDS1901913 255 - 0.427451
NA ECA2672 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3007088 1128 - 0.547872
NA ECA3499 amidasechromosome CDS3918901 1491 + 0.579477
NA ECA3892 putative RNA methyltransferasechromosome CDS4357649 687 - 0.544396
NA ECA3516 putative tRNA/rRNA methyltransferasechromosome CDS3936945 1152 - 0.544271
NA ECA0256 putative dihydrourdine synthasechromosome CDS300298 966 - 0.524845
NA ECA3070 hypothetical proteinchromosome CDS3427616 933 - 0.516613
NA ECA0654 hypothetical proteinchromosome CDS727975 1140 + 0.535965
NA ECA2291 putative RNA pseudouridylate synthasechromosome CDS2596643 885 - 0.548023
NA ECA4364 hypothetical proteinchromosome CDS4888643 1647 - 0.522769
NA ECA2708 hypothetical proteinchromosome CDS3042056 1329 + 0.520692
NA ECA0380 putative endoribonucleasechromosome CDS431494 387 - 0.550388
NA ECA4443 50S ribosomal protein L34chromosome CDS4985770 141 + 0.51773
NA ECA1645 hypothetical proteinchromosome CDS1897721 765 + 0.341176
NA ECA3191 putative acetyltransferasechromosome CDS3571239 552 + 0.556159
NA ECA2908 putative plasmid replication proteinchromosome CDS3253486 765 - 0.359477
NA ECA3349 putative sigma(54) modulation proteinchromosome CDS3765670 342 + 0.45614
NA ECA0674 putative phage-related proteinchromosome CDS747553 270 - 0.511111
NA ECA3660 putative dihydrouridine synthasechromosome CDS4109655 1023 + 0.538612
NA ECA3621 probable tRNA/rRNA methyltransferasechromosome CDS4067902 735 - 0.553742
NA ECA4315 putative RNA-methyltransferasechromosome CDS4834403 465 - 0.529032
NA ECA2141 amidasechromosome CDS2440593 1803 + 0.586245
NA ECA2292 hypothetical proteinchromosome CDS2597688 621 - 0.484702
NA ECA3477 putative translation initiation factor EIF-2Bchromosome CDS3898447 1029 + 0.596696
NA ECA3318 glutamyl-tRNA synthetasechromosome CDS3729711 969 + 0.520124
NA ECA0287 putative sigma(54) modulation proteinchromosome CDS335696 288 - 0.434028
NA ECA3144 hypothetical proteinchromosome CDS3508744 2022 - 0.553412
NA ECA2440 putative RNA pseudouridylate synthasechromosome CDS2755854 657 + 0.490107
NA ECA0326 putative plasmid stability proteinchromosome CDS374452 288 + 0.423611
NA ECA1958 hypothetical proteinchromosome CDS2217316 330 + 0.518182
NA ECA2170 hypothetical proteinchromosome CDS2474317 1146 - 0.539267
NA ECA2732 elongation factor Pchromosome CDS3072423 573 + 0.499127
NA ECA2376 putative endoribonucleasechromosome CDS2687612 345 + 0.53913
NA ECA3239 putative RNA methyltransferasechromosome CDS3622058 726 - 0.528926
NA ECA0696 hypothetical proteinchromosome CDS767061 294 - 0.462585
NA ECA0063 hypothetical proteinchromosome CDS79098 288 - 0.434028
NA ECA3012 probable acetyltransferasechromosome CDS3365704 576 + 0.519097
NA ECA2183 putative ATP/GTP-binding proteinchromosome CDS2486231 1092 - 0.504579
NA ECA0931 putative avirulence proteinchromosome CDS1041218 1869 - 0.53023
NA ECA2799 putative dihydrouridine synthasechromosome CDS3139631 933 - 0.558414
NA ECA1319 hypothetical proteinchromosome CDS1492350 1425 - 0.509474
NA ECA1025 putative RNA pseudouridylate synthasechromosome CDS1147729 786 + 0.53944
NA ECA3260 putative cytidine and deoxycytidylate deaminasechromosome CDS3651263 525 - 0.569524
NA ECA2501 hypothetical proteinchromosome CDS2819423 696 - 0.45546
alaS ECA3367 alanyl-tRNA synthetasechromosome CDS3782345 2628 - 0.517123
ansA ECA2340 cytoplasmic asparaginase Ichromosome CDS2651794 1020 + 0.512745
ansB1 ECA1102 L-asparaginase precursorchromosome CDS1248508 1041 + 0.51585
ansB2 ECA4126 L-asparaginase IIchromosome CDS4603858 1050 + 0.545714
argS ECA2520 arginyl-tRNA synthetasechromosome CDS2835515 1731 + 0.515309
asnS ECA2541 asparaginyl-tRNA synthetasechromosome CDS2864092 1401 + 0.511777
aspS ECA2496 aspartyl-tRNA synthetasechromosome CDS2811956 1800 - 0.538889
cafA ECA0271 ribonuclease Gchromosome CDS316547 1470 + 0.521769
cca ECA3588 tRNA nucleotidyltransferasechromosome CDS4034399 1245 + 0.556626
crl ECA3464 curlin genes transcriptional activatorchromosome CDS3883953 375 - 0.493333
cysS ECA3151 cysteinyl-tRNA synthetasechromosome CDS3517663 1386 - 0.518759
dbpA ECA3092 ATP-independent RNA helicasechromosome CDS3451774 1383 - 0.53073
deaD ECA0718 ATP-independent RNA helicasechromosome CDS787369 1914 + 0.543365
def ECA3999 peptide deformylasechromosome CDS4482450 510 + 0.482353
dtd ECA0032 D-tyrosyl-tRNA deacylasechromosome CDS39698 438 + 0.515982
efp ECA3976 elongation factor Pchromosome CDS4447619 567 - 0.499118
fmt ECA4000 methionyl-tRNA formyltransferasechromosome CDS4482986 948 + 0.511603
frr ECA1034 ribosome releasing factorchromosome CDS1157130 558 + 0.5
fusA ECA4036 elongation factor EF-2chromosome CDS4503842 2115 - 0.491253
glnS ECA1328 glutaminyl-tRNA synthetasechromosome CDS1504627 1659 + 0.503918
gltX ECA3291 glutamyl-tRNA synthetasechromosome CDS3696813 1416 - 0.523305
glyQ ECA0084 glycyl-tRNA synthetase alpha subunitchromosome CDS98527 915 + 0.528962
glyS ECA0085 glycyl-tRNA synthetase beta subunitchromosome CDS99451 2070 + 0.546377
gshB ECA3924 glutathione synthetasechromosome CDS4392301 960 + 0.5375
hemK ECA2191 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2493971 846 + 0.561466
hisS ECA3219 histidyl-tRNA synthetasechromosome CDS3601955 1275 - 0.533333
hslR ECA4104 heat shock proteinchromosome CDS4573911 411 + 0.545012
ileS ECA3876 isoleucyl-tRNA synthetasechromosome CDS4335368 2814 - 0.536603
infA ECA2653 translation initiation factor IF-1chromosome CDS2988043 219 + 0.488584
infB ECA0712 translation initiation factor IF-2chromosome CDS779306 2703 + 0.512394
infC ECA2421 translation initiation factor IF-3chromosome CDS2733240 543 - 0.471455
kptA ECA0395 RNA 2'-phosphotransferasechromosome CDS452395 543 - 0.368324
ksgA ECA3859 dimethyladenosine transferasechromosome CDS4319027 819 + 0.505495
leuS ECA1309 leucyl-tRNA synthetasechromosome CDS1480684 2583 - 0.53736
ligT ECA3315 2'-5' RNA ligasechromosome CDS3727604 531 + 0.555556
lysS ECA0774 lysyl-tRNA synthetasechromosome CDS844582 1518 + 0.536232
map ECA1030 methionine aminopeptidasechromosome CDS1153258 795 - 0.514465
miaA ECA3935 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4402952 942 - 0.53397
osmE ECA2411 osmotically inducible lipoprotein Echromosome CDS2723691 330 - 0.475758
pcnB ECA3319 poly(A) polymerasechromosome CDS3730782 1449 + 0.52657
pheS ECA2418 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2731251 984 - 0.515244
pnp ECA0716 polyribonucleotide nucleotidyltransferasechromosome CDS784066 2121 + 0.522867
poxA ECA3968 lysyl-tRNA synthetasechromosome CDS4441333 978 - 0.543967
prfA ECA2190 peptide chain release factor 1chromosome CDS2492889 1083 + 0.545706
prfB ECA0773 peptide chain release factor 2chromosome CDS843475 1098 + 0.509107
prfC ECA0468 peptide chain release factor 3chromosome CDS533382 1590 + 0.520126
prfH ECA3617 peptide chain release factor 2chromosome CDS4065493 624 + 0.557692
prmA ECA0258 ribosomal protein L11 methyltransferasechromosome CDS302533 888 - 0.576577
proS ECA3529 prolyl-tRNA synthetasechromosome CDS3956293 1719 + 0.511344
pth ECA2184 peptidyl-tRNA hydrolasechromosome CDS2487452 588 - 0.494898
queA ECA1119 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1271755 1068 + 0.544944
rbfA ECA0713 ribosome-binding factor Achromosome CDS782083 399 + 0.478697
rfbF ECA1422 glucose-1-phosphate cytidylyltransferasechromosome CDS1614552 774 + 0.432817
rhlB ECA4213 ATP-dependent RNA helicasechromosome CDS4709598 1293 + 0.524362
rhlE ECA2805 putative ATP-dependent RNA helicasechromosome CDS3145672 1452 - 0.568182
rimJ ECA2524 ribosomal-protein-alanine acetyltransferasechromosome CDS2840649 585 - 0.511111
rimK ECA2679 ribosomal protein S6 modification proteinchromosome CDS3014433 912 - 0.528509
rimM ECA3358 16S rRNA-processing proteinchromosome CDS3773866 549 - 0.468124
rluA ECA3854 ribosomal large subunit pseudouridine synthase Achromosome CDS4312461 654 + 0.556575
rluC ECA1790 ribosomal large subunit pseudouridine synthase Cchromosome CDS2038594 957 + 0.505747
rluD ECA3347 ribosomal large subunit pseudouridine synthase Dchromosome CDS3763501 978 - 0.50818
rnd ECA2371 ribonuclease Dchromosome CDS2680470 1125 - 0.526222
rne ECA1789 ribonuclease Echromosome CDS2034716 3285 - 0.518113
rnpA ECA4444 ribonuclease Pchromosome CDS4985929 360 + 0.516667
rph ECA0140 ribonuclease PHchromosome CDS162282 717 + 0.571827
rplA ECA0220 50S ribosomal protein L1chromosome CDS253304 705 + 0.486525
rplB ECA4028 50S ribosomal protein L2chromosome CDS4498610 822 - 0.514599
rplC ECA4031 50S ribosomal protein L3chromosome CDS4500364 630 - 0.490476
rplD ECA4030 50S ribosomal protein L4chromosome CDS4499748 606 - 0.506601
rplE ECA4019 50S ribosomal protein L5chromosome CDS4494967 540 - 0.492593
rplF ECA4016 50S ribosomal protein L6chromosome CDS4493675 534 - 0.501873
rplI ECA3610 50S ribosomal protein L9chromosome CDS4059527 453 - 0.509934
rplJ ECA0221 50S ribosomal protein L10chromosome CDS254326 498 + 0.522088
rplK ECA0219 50S ribosomal protein L11chromosome CDS252872 429 + 0.496504
rplL ECA0222 50S ribosomal protein L7/L12chromosome CDS254890 366 + 0.445355
rplM ECA0306 50S ribosomal protein L13chromosome CDS352201 429 + 0.494172
rplN ECA4021 50S ribosomal protein L14chromosome CDS4495846 372 - 0.486559
rplO ECA4012 50S ribosomal protein L15chromosome CDS4492173 435 - 0.489655
rplP ECA4024 50S ribosomal protein L16chromosome CDS4496826 411 - 0.515815
rplQ ECA4005 50S ribosomal protein L17chromosome CDS4487676 393 - 0.521628
rplR ECA4015 50S ribosomal protein L18chromosome CDS4493312 354 - 0.519774
rplS ECA3356 50S ribosomal protein L19chromosome CDS3772662 348 - 0.482759
rplT ECA2419 50S ribosomal protein L20chromosome CDS2732547 357 - 0.490196
rplU ECA0690 50S ribosomal protein L21chromosome CDS761608 312 + 0.477564
rplV ECA4026 50S ribosomal protein L22chromosome CDS4497968 333 - 0.495495
rplW ECA4029 50S ribosomal protein L23chromosome CDS4499449 303 - 0.475248
rplX ECA4020 50S ribosomal protein L24chromosome CDS4495521 315 - 0.431746
rplY ECA2745 50S ribosomal protein L25chromosome CDS3086967 285 + 0.463158
rpmA ECA0691 50S ribosomal protein L27chromosome CDS761939 258 + 0.465116
rpmB ECA0146 50S ribosomal protein L28chromosome CDS167881 237 + 0.514768
rpmC ECA4023 50S ribosomal subunit protein L29chromosome CDS4496635 192 - 0.484375
rpmD ECA4013 50S ribosomal protein L30chromosome CDS4492611 180 - 0.488889
rpmE ECA4257 50S ribosomal protein L31chromosome CDS4770469 216 - 0.481481
rpmE2 ECA1168 50S ribosomal protein L31chromosome CDS1322445 249 - 0.473896
rpmF ECA1793 50S ribosomal protein L32chromosome CDS2040877 171 + 0.491228
rpmG ECA0147 50S ribosomal protein L33chromosome CDS168129 168 + 0.410714
rpmI ECA2420 50S ribosomal protein L35chromosome CDS2732947 198 - 0.474747
rpmJ ECA4010 50S ribosomal protein L36chromosome CDS4490684 117 - 0.452991
rpmJ2 ECA1167 50S ribosomal protein L36chromosome CDS1322284 144 - 0.4375
rpsA ECA2591 30S ribosomal protein S1chromosome CDS2924025 1674 - 0.490442
rpsB ECA1031 30S ribosomal protein S2chromosome CDS1154397 726 + 0.491736
rpsC ECA4025 30S ribosomal protein S3chromosome CDS4497249 702 - 0.488604
rpsD ECA4007 30S ribosomal protein S4chromosome CDS4489124 621 - 0.489533
rpsE ECA4014 30S ribosomal protein S5chromosome CDS4492797 501 - 0.520958
rpsF ECA3613 30S ribosomal protein S6chromosome CDS4060579 393 - 0.529262
rpsG ECA4037 30S ribosomal protein S7chromosome CDS4506053 471 - 0.490446
rpsH ECA4017 30S ribosomal protein S8chromosome CDS4494222 393 - 0.465649
rpsI ECA0307 30S ribosomal protein S9chromosome CDS352645 393 + 0.526718
rpsJ ECA4032 30S ribosomal protein S10chromosome CDS4501026 312 - 0.512821
rpsK ECA4008 30S ribosomal protein S11chromosome CDS4489775 390 - 0.512821
rpsL ECA4038 30S ribosomal protein S12chromosome CDS4506620 375 - 0.52
rpsM ECA4009 30S ribosomal protein S13chromosome CDS4490181 357 - 0.484594
rpsN ECA4018 30S ribosomal protein S14chromosome CDS4494648 306 - 0.529412
rpsO ECA0715 30S ribosomal protein S15chromosome CDS783547 270 + 0.496296
rpsP ECA3359 30S ribosomal protein S16chromosome CDS3774433 249 - 0.506024
rpsQ ECA4022 30S ribosomal protein S17chromosome CDS4496381 255 - 0.447059
rpsR ECA3611 30S ribosomal protein S18chromosome CDS4060021 228 - 0.491228
rpsS ECA4027 30S ribosomal protein S19chromosome CDS4498315 279 - 0.501792
rpsT ECA3878 30S ribosomal protein S20chromosome CDS4339580 264 + 0.462121
rpsU ECA0682 30S ribosomal protein S21chromosome CDS755185 216 - 0.49537
rrmJ ECA0697 ribosomal RNA large subunit methyltransferasechromosome CDS767499 630 + 0.48254
rsmC ECA0735 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS803587 1047 + 0.551098
rsuA ECA2742 ribosomal small subunit pseudouridine synthasechromosome CDS3083724 696 - 0.494253
rumA ECA3570 23S rRNA (uracil-5-)-methyltransferasechromosome CDS4007131 1353 - 0.55728
serS ECA2644 seryl-tRNA synthetasechromosome CDS2974318 1296 - 0.517747
smpA ECA0839 putative outer membrane lipopotein (small protein A)chromosome CDS928951 336 - 0.535714
srmB ECA3287 ATP-dependent RNA helicasechromosome CDS3692383 1326 + 0.527149
sun ECA4001 Sun proteinchromosome CDS4484001 1290 + 0.493023
tgt ECA1120 queuine tRNA-ribosyltransferasechromosome CDS1272920 1146 + 0.506981
thrS ECA2422 threonyl-tRNA synthetasechromosome CDS2733785 1929 - 0.495594
trmA ECA4239 tRNA (uracil-5-)-methyltransferasechromosome CDS4750499 1104 + 0.526268
trmD ECA3357 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3773072 756 - 0.517196
trmH ECA0037 putative tRNA (guanosine-2'-O)-methyltransferasechromosome CDS47188 693 - 0.536797
trmU ECA2442 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS2757088 1107 + 0.526649
trpS ECA4087 tryptophanyl-tRNA synthetasechromosome CDS4556779 1005 - 0.519403
truA ECA3058 tRNA pseudouridine synthase Achromosome CDS3414618 852 - 0.555164
truB ECA0714 tRNA pseudouridine synthase Bchromosome CDS782481 945 + 0.522751
tsf ECA1032 elongation factor Tschromosome CDS1155257 852 + 0.487089
tuf ECA0216 elongation factor Tuchromosome CDS250357 1185 + 0.5173
tuf ECA4035 elongation factor Tuchromosome CDS4502588 1185 - 0.5173
tyrS ECA1936 tyrosyl-tRNA synthetasechromosome CDS2192856 1278 + 0.519562
valS ECA0402 valyl-tRNA synthetasechromosome CDS458055 2856 - 0.541667
 
Escherichia coli 536, 536
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECP_2607 50S ribosomal protein L19chromosome CDS2752047 348 - 0.482759
NA ECP_3291 probable sigma(54) modulation proteinchromosome CDS3456480 288 + 0.447917
NA ECP_1662 phenylalanyl-tRNA synthetase alpha chainchromosome CDS1712745 984 - 0.546748
NA ECP_1081 50S ribosomal protein L32chromosome CDS1138246 174 + 0.54023
NA ECP_3370 Sua5/YciO/YrdC family proteinchromosome CDS3540484 618 - 0.524272
NA ECP_4391 elongation factor Pchromosome CDS4605858 567 + 0.497355
NA ECP_3430 elongation factor Gchromosome CDS3583036 2115 - 0.508747
NA ECP_1259 peptide chain release factor 1chromosome CDS1288050 1083 + 0.527239
NA ECP_4754 ribosomal RNA small subunit methyltransferase Cchromosome CDS4904837 1032 - 0.557171
NA ECP_0465 queuine tRNA-ribosyltransferasechromosome CDS493627 1128 + 0.512411
NA ECP_0177 30S ribosomal protein S2chromosome CDS194347 726 + 0.513774
NA ECP_3385 30S ribosomal protein S11chromosome CDS3551359 390 - 0.515385
NA ECP_1009 hypothetical protein YcdKchromosome CDS1066187 387 - 0.547804
NA ECP_3399 30S ribosomal protein S17chromosome CDS3557964 255 - 0.47451
NA ECP_3707 hypothetical tRNA/rRNA methyltransferase YibKchromosome CDS3888870 474 + 0.548523
NA ECP_3972 putative ATP-dependent RNA helicase RhlBchromosome CDS4147282 1266 - 0.525276
NA ECP_4197 50S ribosomal protein L1chromosome CDS4390837 705 + 0.514894
NA ECP_2766 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS2907108 1302 - 0.509217
NA ECP_0265 putative peptide chain release factorchromosome CDS285811 615 + 0.534959
NA ECP_0464 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS492502 1071 + 0.535948
NA ECP_1130 putative ribosomal large subunit pseudouridine synthasechromosome CDS1185194 654 - 0.51529
NA ECP_3409 30S ribosomal protein S10chromosome CDS3562609 312 - 0.551282
NA ECP_1260 protein methyltransferase HemKchromosome CDS1289132 834 + 0.555156
NA ECP_3406 50S ribosomal protein L23chromosome CDS3561032 303 - 0.481848
NA ECP_2212 putative elongation factorchromosome CDS2306296 573 + 0.495637
NA ECP_0153 poly(A) polymerasechromosome CDS163178 1419 - 0.557435
NA ECP_2597 ribosomal large subunit pseudouridine synthase Dchromosome CDS2742896 981 - 0.529052
NA ECP_3398 50S ribosomal protein L14chromosome CDS3557428 372 - 0.510753
NA ECP_1121 hypothetical proteinchromosome CDS1176468 216 - 0.435185
NA ECP_3389 50S ribosomal subunit protein L15chromosome CDS3553755 435 - 0.535632
NA ECP_0958 ribosome modulation factorchromosome CDS1019089 168 + 0.541667
NA ECP_2357 tRNA pseudouridine synthase Achromosome CDS2466657 813 - 0.555966
NA ECP_0325 lysyl-tRNA synthetase, heat induciblechromosome CDS343652 1497 - 0.370741
NA ECP_1335 protein YciHchromosome CDS1365750 327 + 0.507645
NA ECP_3266 ribosomal RNA large subunit methyltransferase Jchromosome CDS3437482 630 - 0.506349
NA ECP_0157 2'-5' RNA ligasechromosome CDS166950 540 - 0.562963
NA ECP_3397 50S ribosomal protein L24chromosome CDS3557103 315 - 0.457143
NA ECP_3391 30S ribosomal protein S5chromosome CDS3554376 504 - 0.498016
NA ECP_4199 50S ribosomal protein L7/L12chromosome CDS4392397 366 + 0.461749
NA ECP_3254 tRNA pseudouridine synthase Bchromosome CDS3422283 945 - 0.528042
NA ECP_2617 outer membrane lipoproteinchromosome CDS2761357 342 + 0.497076
NA ECP_0941 asparaginyl-tRNA synthetasechromosome CDS997973 1401 - 0.525339
NA ECP_3376 SUN proteinchromosome CDS3544854 1290 + 0.502326
NA ECP_0700 glutaminyl-tRNA synthetasechromosome CDS741439 1665 + 0.52973
NA ECP_3432 30S ribosomal protein S12chromosome CDS3585814 375 - 0.533333
NA ECP_2599 putative sigma 54 modulation proteinchromosome CDS2745018 342 + 0.461988
NA ECP_0059 ribosomal large subunit pseudouridine synthase Achromosome CDS60402 660 - 0.537879
NA ECP_1316 putative ribosomal large subunit pseudouridine synthasechromosome CDS1348433 876 + 0.534247
NA ECP_4198 50S ribosomal protein L10chromosome CDS4391833 498 + 0.522088
NA ECP_1666 threonyl-tRNA synthetasechromosome CDS1715428 1929 - 0.494038
NA ECP_0684 MiaB proteinchromosome CDS720322 1425 - 0.54807
NA ECP_1128 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1183563 1107 - 0.536585
NA ECP_2941 glutathione synthetasechromosome CDS3109696 951 + 0.521556
NA ECP_0178 elongation factor Tschromosome CDS195207 852 + 0.496479
NA ECP_4416 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4628869 951 + 0.532072
NA ECP_4193 elongation factor Tuchromosome CDS4387902 1185 + 0.530802
NA ECP_0811 putative ATP-dependent RNA helicase RhlEchromosome CDS846751 1362 + 0.561674
NA ECP_2226 50S ribosomal protein L25chromosome CDS2323364 285 + 0.505263
NA ECP_4196 50S ribosomal protein L11chromosome CDS4390405 429 + 0.517483
NA ECP_0180 ribosome recycling factorchromosome CDS197080 558 + 0.503584
NA ECP_4758 peptide chain release factor 3 (RF-3)chromosome CDS4907555 1617 + 0.53927
NA ECP_3272 50S ribosomal protein L27chromosome CDS3443165 258 - 0.503876
NA ECP_3741 ribonuclease PHchromosome CDS3920304 717 - 0.560669
NA ECP_0672 leucyl-tRNA synthetasechromosome CDS706062 2583 - 0.530778
NA ECP_3429 elongation factor Tuchromosome CDS3581781 1185 - 0.534177
NA ECP_2610 30S ribosomal protein S16chromosome CDS2753801 249 - 0.514056
NA ECP_3175 putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3345769 1137 - 0.5365
NA ECP_3352 ribosomal protein L11 methyltransferasechromosome CDS3518960 882 + 0.546485
NA ECP_3256 translation initiation factor IF-2chromosome CDS3423792 2673 - 0.530864
NA ECP_3735 50S ribosomal protein L28chromosome CDS3915908 237 - 0.527426
NA ECP_1661 phenylalanyl-tRNA synthetase beta chainchromosome CDS1710343 2388 - 0.544389
NA ECP_0866 ribosomal protein S6 modification proteinchromosome CDS906118 903 + 0.560354
NA ECP_3206 TdcF proteinchromosome CDS3375312 390 - 0.520513
NA ECP_3662 glycine tRNA synthetase, alpha subunitchromosome CDS3837231 912 - 0.560307
NA ECP_4445 30S ribosomal subunit protein S6chromosome CDS4654737 306 + 0.53268
NA ECP_2883 lysyl-tRNA synthetasechromosome CDS3052540 1518 - 0.525692
NA ECP_0922 30S ribosomal protein S1chromosome CDS972555 1674 + 0.511947
NA ECP_3392 50S ribosomal protein L18chromosome CDS3554894 354 - 0.536723
NA ECP_3387 50S ribosomal protein L36chromosome CDS3552268 117 - 0.478632
NA ECP_2608 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2752436 768 - 0.532552
NA ECP_3253 30S ribosomal protein S15chromosome CDS3421865 270 - 0.522222
NA ECP_3146 tRNA nucleotidyltransferasechromosome CDS3313676 1239 + 0.565779
NA ECP_4448 50S ribosomal protein L9chromosome CDS4655637 450 + 0.497778
NA ECP_1752 hypothetical protein YoaB (putative translation initiation inhibitor)chromosome CDS1805214 348 + 0.522988
NA ECP_3395 30S ribosomal protein S14chromosome CDS3556229 306 - 0.526144
NA ECP_2369 hypothetical adenine-specific methylase YfcBchromosome CDS2479341 1266 - 0.522117
NA ECP_2578 ATP-dependent RNA helicase SrmBchromosome CDS2718306 1335 + 0.546067
NA ECP_2224 ribosomal small subunit pseudouridine synthase Achromosome CDS2320634 696 - 0.534483
NA ECP_3749 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS3928988 690 + 0.549275
NA ECP_1397 ATP-independent RNA helicase DbpAchromosome CDS1428811 1374 + 0.515284
NA ECP_4425 hypothetical tRNA/rRNA methyltransferase YjfHchromosome CDS4638803 732 + 0.554645
NA ECP_3486 heat shock protein 15chromosome CDS3635673 402 + 0.527363
NA ECP_3375 methionyl-tRNA formyltransferasechromosome CDS3543855 948 + 0.515823
NA ECP_4182 tRNA (uracil-5-)-methyltransferasechromosome CDS4374284 1101 - 0.502271
NA ECP_1076 ribonuclease Echromosome CDS1132061 3186 - 0.555556
NA ECP_3267 hypothetical RNA binding proteinchromosome CDS3438237 294 + 0.486395
NA ECP_3155 30S ribosomal protein S21chromosome CDS3322467 216 + 0.518519
NA ECP_4447 30S ribosomal protein S18chromosome CDS4655368 228 + 0.526316
NA ECP_2561 hypothetical protein YfhCchromosome CDS2702769 537 - 0.528864
NA ECP_1663 50S ribosomal protein L20chromosome CDS1714179 357 - 0.487395
NA ECP_4025 hypothetical proteinchromosome CDS4200208 258 - 0.395349
NA ECP_3407 50S ribosomal protein L4chromosome CDS3561331 606 - 0.531353
NA ECP_2951 L-asparaginase II precursorchromosome CDS3117400 1047 - 0.518625
NA ECP_3313 30S ribosomal protein S9chromosome CDS3479414 393 - 0.521628
NA ECP_2583 hypothetical tRNA/rRNA methyltransferase YfiFchromosome CDS2722725 1038 - 0.563584
NA ECP_0053 dimethyladenosine transferasechromosome CDS53715 822 - 0.537713
NA ECP_1822 arginyl-tRNA synthetasechromosome CDS1871790 1734 + 0.529988
NA ECP_3394 30S ribosomal protein S8chromosome CDS3555803 393 - 0.501272
NA ECP_3384 30S ribosomal protein S4chromosome CDS3550705 621 - 0.507246
NA ECP_1951 hypothetical proteinchromosome CDS2004615 477 + 0.467505
NA ECP_2519 histidyl-tRNA synthetasechromosome CDS2649045 1275 - 0.545882
NA ECP_4145 50S ribosomal protein L31chromosome CDS4326417 213 + 0.492958
NA ECP_3734 50S ribosomal protein L33chromosome CDS3915720 168 - 0.404762
NA ECP_3403 50S ribosomal protein L22chromosome CDS3559551 333 - 0.498498
NA ECP_3273 50S ribosomal protein L21chromosome CDS3443443 312 - 0.483974
NA ECP_3405 50S ribosomal protein L2chromosome CDS3560193 822 - 0.526764
NA ECP_0907 seryl-tRNA synthetasechromosome CDS953210 1293 + 0.528229
NA ECP_0849 hypothetical protein YliGchromosome CDS890861 1326 - 0.522624
NA ECP_1252 peptidyl-tRNA hydrolasechromosome CDS1280967 585 - 0.500855
NA ECP_2609 16S rRNA processing protein RimMchromosome CDS2753234 549 - 0.48816
NA ECP_2657 alanyl-tRNA synthetasechromosome CDS2796262 2631 - 0.538198
NA ECP_4096 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS4279320 438 + 0.550228
NA ECP_1078 ribosomal large subunit pseudouridine synthase Cchromosome CDS1135819 960 + 0.517708
NA ECP_1532 spermidine N(1)-acetyltransferasechromosome CDS1581995 561 + 0.468806
NA ECP_3661 glycyl-tRNA synthetase beta chainchromosome CDS3835152 2070 - 0.550725
NA ECP_3400 50S ribosomal protein L29chromosome CDS3558218 192 - 0.541667
NA ECP_3692 selenocysteine-specific elongation factorchromosome CDS3867550 1845 - 0.564228
NA ECP_1715 L-asparaginase Ichromosome CDS1768268 1017 + 0.500492
NA ECP_2884 peptide chain release factor 2chromosome CDS3054067 882 - 0.530612
NA ECP_1810 aspartyl-tRNA synthetasechromosome CDS1860478 1773 - 0.539763
NA ECP_1969 probable amidasechromosome CDS2028136 1464 - 0.562842
NA ECP_4667 RNA 2'-phosphotransferasechromosome CDS4864164 555 + 0.506306
NA ECP_0360 50S ribosomal protein L31 type Bchromosome CDS379805 267 - 0.460674
NA ECP_0022 30S ribosomal protein S20chromosome CDS22358 264 - 0.462121
NA ECP_3353 tRNA-dihydrouridine synthase Bchromosome CDS3520170 966 + 0.519669
NA ECP_3255 ribosome-binding factor Achromosome CDS3423227 402 - 0.529851
NA ECP_0898 translation initiation factor IF-1chromosome CDS940017 219 - 0.484018
NA ECP_0359 putative 50S ribosomal protein L36chromosome CDS379665 141 - 0.432624
NA ECP_2772 hypothetical protein YqcB (putative RNA pseudouridylate synthase)chromosome CDS2916409 783 - 0.538953
NA ECP_0176 methionine aminopeptidasechromosome CDS193185 795 - 0.508176
NA ECP_1251 putative GTP-binding proteinchromosome CDS1279759 1092 - 0.513736
NA ECP_4240 ribosomal large subunit pseudouridine synthase Fchromosome CDS4445866 873 + 0.5063
NA ECP_0424 bacterial transferase hexapeptidechromosome CDS450905 441 - 0.45805
NA ECP_4401 putative lysyl-tRNA synthetasechromosome CDS4612816 978 + 0.52454
NA ECP_3431 30S ribosomal protein S7chromosome CDS3585247 471 - 0.496815
NA ECP_3404 30S ribosomal protein S19chromosome CDS3559898 279 - 0.491039
NA ECP_0204 prolyl-tRNA synthetasechromosome CDS221218 1719 - 0.538685
NA ECP_0200 peptidyl-tRNA hydrolasechromosome CDS219040 423 + 0.543735
NA ECP_3330 ribonuclease Gchromosome CDS3497644 1470 - 0.521769
NA ECP_3393 50S ribosomal protein L6chromosome CDS3555257 534 - 0.520599
NA ECP_3250 probable ATP-dependent RNA helicase DeaDchromosome CDS3416421 1890 - 0.558201
NA ECP_3408 50S ribosomal protein L3chromosome CDS3561947 630 - 0.515873
NA ECP_4265 hypothetical protein YjbN (putative tRNA-dihydrouridine synthase)chromosome CDS4471986 996 + 0.533133
NA ECP_1664 50S ribosomal protein L35chromosome CDS1714588 198 - 0.5
NA ECP_1665 translation initiation factor IF-3chromosome CDS1714882 435 - 0.478161
NA ECP_1431 ribosomal-protein-serine acetyltransferasechromosome CDS1475022 540 + 0.435185
NA ECP_4373 lysyl-tRNA synthetase, heat induciblechromosome CDS4583671 1518 - 0.474308
NA ECP_2152 methionyl-tRNA synthetasechromosome CDS2234789 2043 + 0.522761
NA ECP_3390 50S ribosomal protein L30chromosome CDS3554193 180 - 0.5
NA ECP_0587 cysteinyl-tRNA synthetasechromosome CDS617573 1386 + 0.544012
NA ECP_3402 30S ribosomal protein S3chromosome CDS3558832 702 - 0.509971
NA ECP_3374 peptide deformylasechromosome CDS3543331 510 + 0.466667
NA ECP_4389 hypothetical protein YjeJchromosome CDS4603684 870 - 0.452874
NA ECP_1058 ribosomal-protein-alanine acetyltransferasechromosome CDS1116445 585 + 0.494017
NA ECP_3396 50S ribosomal protein L5chromosome CDS3556549 540 - 0.498148
NA ECP_3314 50S ribosomal protein L13chromosome CDS3479822 429 - 0.505827
NA ECP_3469 tryptophanyl-tRNA synthetasechromosome CDS3618956 1005 - 0.526368
NA ECP_3382 50S ribosomal protein L17chromosome CDS3549266 384 - 0.533854
NA ECP_1314 probable translation factor YciOchromosome CDS1345683 621 + 0.491143
NA ECP_0873 hypothetical RNA methyltransferase YbjFchromosome CDS912659 1128 + 0.539894
NA ECP_3401 50S ribosomal protein L16chromosome CDS3558409 411 - 0.515815
NA ECP_3386 30S ribosomal protein S13chromosome CDS3551765 357 - 0.518207
NA ECP_0154 glutamyl-tRNA synthetasechromosome CDS164635 927 - 0.535059
 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_168 hypothetical proteinchromosome CDS1127292 960 + 0.517708
NA APECO1_427 hypothetical proteinchromosome CDS1382921 657 + 0.496195
NA APECO1_2050 hypothetical proteinchromosome CDS5006794 621 - 0.505636
NA APECO1_3835 hypothetical proteinchromosome CDS2986880 1113 + 0.530099
NA APECO1_4383 hypothetical proteinchromosome CDS2377933 828 + 0.503623
NA APECO1_667 spermidine N1-acetyltransferasechromosome CDS1677914 561 + 0.468806
NA APECO1_2646 hypothetical proteinchromosome CDS4312693 258 - 0.395349
alaS APECO1_3829 alanyl-tRNA synthetasechromosome CDS2992939 2631 - 0.538959
ansA APECO1_836 L-asparaginase Ichromosome CDS1864333 1017 + 0.500492
ansB APECO1_3564 L-asparaginase II precursorchromosome CDS3294333 1047 - 0.51958
argS APECO1_926 arginyl-tRNA synthetasechromosome CDS1967921 1734 + 0.530565
asnS APECO1_42 AsnSchromosome CDS990884 1446 - 0.517981
aspS APECO1_916 aspartyl-tRNA synthetasechromosome CDS1956610 1773 - 0.538635
cysS APECO1_1488 cysteinyl-tRNA synthetasechromosome CDS567227 1386 + 0.54329
dbpA APECO1_495 ATP-independent RNA helicase DbpAchromosome CDS1464582 1374 + 0.521106
deaD APECO1_3268 inducible ATP-independent RNA helicasechromosome CDS3598706 1941 - 0.552293
def APECO1_3160 peptide deformylasechromosome CDS3724406 510 + 0.466667
dtd APECO1_2580 D-tyrosyl-tRNA deacylasechromosome CDS4388466 438 + 0.547945
dusB APECO1_3178 tRNA-dihydrouridine synthase Bchromosome CDS3701148 966 + 0.519669
efp APECO1_2242 elongation factor P (EF-P)chromosome CDS4783222 567 + 0.497355
fmt APECO1_3159 methionyl-tRNA formyltransferasechromosome CDS3724930 948 + 0.514768
frr APECO1_1815 ribosome releasing factorchromosome CDS197685 522 + 0.511494
ftsJ APECO1_3253 cell division proteinchromosome CDS3619765 630 - 0.504762
fusA APECO1_3113 elongation factor EF-2chromosome CDS3762183 2115 - 0.507801
glnS APECO1_1384 glutaminyl-tRNA synthetasechromosome CDS691417 1665 + 0.527327
gltX APECO1_4141 glutamyl-tRNA synthetasechromosome CDS2651714 1416 - 0.52613
glyQ APECO1_2890 glycyl-tRNA synthetase subunit alphachromosome CDS4023053 912 - 0.560307
glyS APECO1_2891 glycyl-tRNA synthetase subunit betachromosome CDS4020974 2070 - 0.556039
gshB APECO1_3574 glutathione synthetasechromosome CDS3286625 951 + 0.526814
hemK APECO1_329 protein methyltransferase HemKchromosome CDS1279819 834 + 0.555156
hisS APECO1_4010 histidyl-tRNA synthetasechromosome CDS2799144 1275 - 0.545882
hslR APECO1_3064 ribosome-associated heat shock protein Hsp15chromosome CDS3814793 402 + 0.527363
ileS APECO1_1957 isoleucyl-tRNA synthetasechromosome CDS23899 2817 + 0.544551
infB APECO1_3262 translation initiation factor IF-2chromosome CDS3606077 2673 - 0.530864
ksgA APECO1_1931 dimethyladenosine transferasechromosome CDS54788 822 - 0.537713
lasT APECO1_1977 putative rRNA methyltransferasechromosome CDS5081296 687 + 0.483261
leuS APECO1_14132 leucyl-tRNA synthetasechromosome CDS655652 2724 - 0.529001
lysS APECO1_2324 lysyl-tRNA synthetasechromosome CDS4697611 1518 - 0.476285
lysS APECO1_3637 lysine tRNA synthetase, constitutivechromosome CDS3229418 1518 - 0.525692
map APECO1_1819 methionine aminopeptidasechromosome CDS193754 795 - 0.508176
miaA APECO1_2220 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4806788 951 + 0.528917
miaB APECO1_1402 isopentenyl-adenosine A37 tRNA methylthiolasechromosome CDS669915 1425 - 0.548772
pcnB APECO1_1842 poly(A) polymerase Ichromosome CDS163751 1365 - 0.562637
pheS APECO1_788 phenylalanine tRNA synthetase, alpha subunitchromosome CDS1814772 996 - 0.544177
pheT APECO1_787 phenylalanyl-tRNA synthetase beta chainchromosome CDS1812370 2388 - 0.54397
pnp APECO1_3266 polynucleotide phosphorylase/polyadenylasechromosome CDS3601768 2205 - 0.530612
prfA APECO1_328 peptide chain release factor 1chromosome CDS1278737 1083 + 0.525392
prfB APECO1_3636 peptide chain release factor 2chromosome CDS3230945 882 - 0.534014
prfC APECO1_2006 peptide chain release factor RF-3chromosome CDS5049628 1587 + 0.541903
prfH APECO1_1733 peptide chain release factor-like proteinchromosome CDS286381 699 + 0.542203
prmA APECO1_3179 methylase for 50S ribosomal subunit protein L11chromosome CDS3699938 882 + 0.545351
prmB APECO1_4234 protein-(glutamine-N5) methyltransferasechromosome CDS2552611 1266 - 0.522117
proS APECO1_1793 prolyl-tRNA synthetasechromosome CDS221787 1719 - 0.539849
pth APECO1_320 peptidyl-tRNA hydrolasechromosome CDS1271654 384 - 0.479167
queA APECO1_1605 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS440984 1071 + 0.53408
rbfA APECO1_3263 ribosome-binding factor Achromosome CDS3605512 402 - 0.529851
rhlB APECO1_2693 ATP-dependent RNA helicasechromosome CDS4257156 1266 - 0.521327
rhlE APECO1_1293 putative ATP-dependent RNA helicase RhlEchromosome CDS795417 1362 + 0.562408
rimJ APECO1_148 RimJchromosome CDS1107918 585 + 0.494017
rimK APECO1_1241 ribosomal protein S6 modification proteinchromosome CDS854764 903 + 0.55814
rimL APECO1_573 ribosomal-protein-L7/L12-serine acetyltransferasechromosome CDS1561127 540 + 0.433333
rimM APECO1_3925 16S rRNA processing proteinchromosome CDS2904596 552 - 0.487319
rluB APECO1_429 23S rRNA pseudouridylate synthasechromosome CDS1385713 876 + 0.533105
rluD APECO1_3936 23S rRNA pseudouridine synthasechromosome CDS2894256 981 - 0.527013
rluE APECO1_217 23S rRNA pseudouridine synthasechromosome CDS1176666 654 - 0.521407
rne APECO1_166 Rnase Echromosome CDS1123534 3186 - 0.557439
rng APECO1_3198 ribonuclease Gchromosome CDS3678623 1470 - 0.521769
rnpA APECO1_27542 inner membrane protein translocase component YidCchromosome CDS4178858 360 + 0.558333
rph APECO1_2818 ribonuclease PHchromosome CDS4107158 717 - 0.564854
rplB APECO1_3133 50S ribosomal subunit protein L2chromosome CDS3741268 822 - 0.525547
rplC APECO1_3131 50S ribosomal subunit protein L3chromosome CDS3743022 630 - 0.514286
rplD APECO1_3132 50S ribosomal protein L4chromosome CDS3742406 606 - 0.531353
rplE APECO1_3141 50S ribosomal subunit protein L5chromosome CDS3737624 540 - 0.498148
rplF APECO1_3144 50S ribosomal subunit protein L6chromosome CDS3736332 534 - 0.520599
rplI APECO1_2190 50S ribosomal subunit protein L9chromosome CDS4833555 450 + 0.497778
rplJ APECO1_2488 50S ribosomal subunit protein L10chromosome CDS4501456 498 + 0.522088
rplM APECO1_3213 50S ribosomal protein L13chromosome CDS3660801 429 - 0.505827
rplN APECO1_3139 50S ribosomal subunit protein L14chromosome CDS3738503 372 - 0.510753
rplO APECO1_3147 50S ribosomal protein L15chromosome CDS3734830 435 - 0.535632
rplP APECO1_3137 50S ribosomal subunit protein L16chromosome CDS3739484 411 - 0.515815
rplQ APECO1_3153 50S ribosomal subunit protein L17chromosome CDS3730341 384 - 0.533854
rplR APECO1_3145 50S ribosomal subunit protein L18chromosome CDS3735969 354 - 0.536723
rplS APECO1_3927 50S ribosomal subunit protein L19chromosome CDS2903407 348 - 0.482759
rplT APECO1_789 50S ribosomal subunit protein L20chromosome CDS1816206 357 - 0.487395
rplV APECO1_3135 50S ribosomal protein L22chromosome CDS3740626 333 - 0.498498
rplX APECO1_3140 50S ribosomal subunit protein L24chromosome CDS3738178 315 - 0.457143
rpsA APECO1_23 RpsAchromosome CDS965475 1674 + 0.512545
rpsB APECO1_1818 30S ribosomal protein S2chromosome CDS194916 726 + 0.513774
rpsC APECO1_3136 30S ribosomal subunit protein S3chromosome CDS3739907 702 - 0.509971
rpsD APECO1_3151 30S ribosomal subunit protein S4chromosome CDS3731780 621 - 0.507246
rpsE APECO1_3146 30S ribosomal subunit protein S5chromosome CDS3735451 504 - 0.498016
rpsF APECO1_2192 30S ribosomal subunit protein S6chromosome CDS4832565 396 + 0.527778
rpsG APECO1_3112 30S ribosomal protein S7chromosome CDS3764394 471 - 0.496815
rpsH APECO1_3143 30S ribosomal subunit protein S8, and regulatorchromosome CDS3736878 393 - 0.501272
rpsI APECO1_3214 30S ribosomal subunit protein S9chromosome CDS3660393 393 - 0.524173
rpsJ APECO1_3130 30S ribosomal subunit protein S10chromosome CDS3743684 312 - 0.551282
rpsK APECO1_3150 30S ribosomal subunit protein S11chromosome CDS3732434 390 - 0.515385
rpsL APECO1_3111 30S ribosomal protein S12chromosome CDS3764961 375 - 0.530667
rpsM APECO1_3149 30S ribosomal subunit protein S13chromosome CDS3732840 357 - 0.518207
rpsN APECO1_3142 30S ribosomal subunit protein S14chromosome CDS3737304 306 - 0.526144
rpsO APECO1_3265 30S ribosomal subunit protein S15chromosome CDS3604150 270 - 0.518519
rpsP APECO1_3924 30S ribosomal subunit protein S16chromosome CDS2905163 309 - 0.511327
rpsQ APECO1_3138 30S ribosomal subunit protein S17chromosome CDS3739039 255 - 0.47451
rpsS APECO1_3134 30S ribosomal protein S19chromosome CDS3740973 279 - 0.491039
rsuA APECO1_4372 16S rRNA pseudouridylate 516 synthasechromosome CDS2392527 696 - 0.533046
rumA APECO1_3746 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS3082663 1302 - 0.508449
selB APECO1_2863 selenocysteinyl-tRNA-specific translation factorchromosome CDS4054732 1845 - 0.56748
serS APECO1_1196 seryl-tRNA synthetasechromosome CDS911284 1293 + 0.528229
smpA APECO1_3917 small membrane lipoproteinchromosome CDS2912719 342 + 0.497076
spoU APECO1_2810 tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS4115843 690 + 0.556522
srmB APECO1_39552 putative transcriptional regulator YfiEchromosome CDS2866971 1335 + 0.544569
sun APECO1_3158 Sun proteinchromosome CDS3725929 1290 + 0.496899
tadA APECO1_3972 tRNA-specific adenosine deaminasechromosome CDS2851434 537 - 0.528864
tdcF APECO1_3311 putative L-PSP (mRNA) endoribonucleasechromosome CDS3558533 438 - 0.520548
tgt APECO1_1604 tRNA-guanine transglycosylasechromosome CDS442109 1128 + 0.513298
thrS APECO1_791 threonine tRNA synthetasechromosome CDS1817455 1929 - 0.493002
trmA APECO1_2498 tRNA (uracil-5-)-methyltransferasechromosome CDS4483892 1101 - 0.502271
trmD APECO1_39262 tRNA (guanine-1-)-methyltransferasechromosome CDS2903796 333 - 0.525526
trmD APECO1_3926 tRNA (guanine-1-)-methyltransferasechromosome CDS2904206 360 - 0.541667
trpS APECO1_3079 tryptophanyl-tRNA synthetasechromosome CDS3798079 1005 - 0.524378
truA APECO1_4246 tRNA pseudouridine synthase Achromosome CDS2539927 813 - 0.555966
truB APECO1_3264 tRNA pseudouridine 5S synthasechromosome CDS3604568 945 - 0.526984
tufA APECO1_3114 translation elongation factor EF-Tuchromosome CDS3760928 1230 - 0.53252
tufA APECO1_2492 translation elongation factor EF-Tuchromosome CDS4497525 1185 + 0.533333
tyrS APECO1_720 tyrosine tRNA synthetasechromosome CDS1737337 1287 - 0.519037
valS APECO1_2136 valyl-tRNA synthetasechromosome CDS4897535 2856 - 0.546219
yadB APECO1_1841 glutamyl-Q tRNA(Asp) synthetasechromosome CDS165208 927 - 0.537217
yadP APECO1_1838 2'-5' RNA ligasechromosome CDS167523 744 - 0.564516
ybjF APECO1_1234 hypothetical RNA methyltransferase YbjFchromosome CDS861314 1128 + 0.54078
ycdK APECO1_101 hypothetical proteinchromosome CDS1057662 387 - 0.537468
ycfB APECO1_215 putative ATPasechromosome CDS1175035 1152 - 0.536458
ychF APECO1_319 putative GTP-binding protein YchFchromosome CDS1270446 1092 - 0.513736
yciH APECO1_442 putative translation initiation factorchromosome CDS1401500 330 + 0.506061
yebU APECO1_889 hypothetical proteinchromosome CDS1928132 1446 + 0.524896
yfhQ APECO1_3993 putative methyltransferasechromosome CDS2821794 741 - 0.547908
yfiF APECO1_39512 tRNA/rRNA methyltransferase YfiFchromosome CDS2871390 372 - 0.556452
ygjO APECO1_3334 putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3534251 1137 - 0.539138
yhbH APECO1_3232 putative sigma-54 modulation proteinchromosome CDS3638763 288 + 0.451389
yibK APECO1_2849 predicted rRNA methylasechromosome CDS4075724 474 + 0.550633
yicN APECO1_2789 hypothetical proteinchromosome CDS4140765 480 - 0.527083
yjbC APECO1_2446 hypothetical proteinchromosome CDS4555334 873 + 0.505155
yjbN APECO1_2423 tRNA-dihydrouridine synthase Achromosome CDS4581380 996 + 0.536145
yjeA APECO1_2234 lysyl-tRNA synthetasechromosome CDS4790136 1008 + 0.521825
yjeJ APECO1_2244 hypothetical proteinchromosome CDS4781048 870 - 0.452874
yjfH APECO1_2212 hypothetical proteinchromosome CDS4816723 732 + 0.554645
yjgF APECO1_2149 hypothetical proteinchromosome CDS4885320 426 - 0.511737
yjiI APECO1_2087 hypothetical proteinchromosome CDS4959685 462 + 0.474026
yjjT APECO1_2055 ribosomal RNA small subunit methyltransferase Cchromosome CDS5000601 1032 - 0.559109
ykgM APECO1_1701 50S ribosomal protein L31 type B-1chromosome CDS324696 267 - 0.460674
yliG APECO1_1258 hypothetical proteinchromosome CDS839526 1326 - 0.522624
yoaB APECO1_867 hypothetical proteinchromosome CDS1901233 393 + 0.51145
yqcB APECO1_3740 tRNA pseudouridine synthasechromosome CDS3091964 783 - 0.542784
yrdC APECO1_3164 putative ribosome maturation factorchromosome CDS3721559 618 - 0.522654
 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c0385 hypothetical proteinchromosome CDS364237 453 - 0.503311
NA c1478 hypothetical proteinchromosome CDS1375014 252 - 0.412698
NA c0406 50S ribosomal protein L36chromosome CDS387492 144 - 0.430556
NA c2396 hypothetical proteinchromosome CDS2200253 315 - 0.352381
NA c4178 hypothetical proteinchromosome CDS3960843 153 + 0.372549
NA c4561 hypothetical proteinchromosome CDS4333119 1131 - 0.343943
NA c2742 hypothetical proteinchromosome CDS2585846 543 + 0.567219
NA c2440 hypothetical proteinchromosome CDS2252162 477 + 0.467505
NA c0277 hypothetical proteinchromosome CDS260823 849 + 0.566549
NA c5211 hypothetical proteinchromosome CDS4965038 1461 - 0.386721
NA c2457 Putative amidasechromosome CDS2275682 1488 - 0.563844
NA c4754 hypothetical proteinchromosome CDS4520103 258 - 0.395349
NA c4846 hypothetical proteinchromosome CDS4608966 627 + 0.507177
NA c3139 Small protein Achromosome CDS3016191 342 + 0.497076
NA c1514 hypothetical proteinchromosome CDS1395370 357 - 0.546219
NA c3243 hypothetical proteinchromosome CDS3095653 1113 + 0.5292
ansA c2171 cytoplasmic asparaginase Ichromosome CDS2008089 1017 + 0.500492
ansB c3543 L-asparaginase II precursorchromosome CDS3395541 1047 - 0.51958
argS c2291 arginyl-tRNA synthetasechromosome CDS2111615 1734 + 0.529988
asnS c1072 asparaginyl-tRNA synthetasechromosome CDS1038373 1401 - 0.526053
aspS c2280 aspartyl-tRNA synthetasechromosome CDS2100303 1773 - 0.538071
cafA c4001 Ribonuclease Gchromosome CDS3819525 1488 - 0.520833
cca c3806 tRNA nucleotidyltransferasechromosome CDS3642585 1239 + 0.560129
cysS c0642 cysteinyl-tRNA synthetasechromosome CDS623669 1386 + 0.541847
dbpA c1817 ATP-independent RNA helicase dbpAchromosome CDS1648163 1374 + 0.517467
deaD c3916 Cold-shock DEAD-box protein Achromosome CDS3739604 1956 - 0.551125
def c4047 peptide deformylasechromosome CDS3865057 510 + 0.466667
efp c5232 elongation factor Pchromosome CDS4984420 567 + 0.495591
fmt c4048 methionyl-tRNA formyltransferasechromosome CDS3865581 948 + 0.516878
frr c0208 ribosome releasing factorchromosome CDS202905 558 + 0.505376
ftsJ c3936 Ribosomal RNA large subunit methyltransferase Jchromosome CDS3760667 630 - 0.504762
fusA c4112 elongation factor EF-2chromosome CDS3902788 2115 - 0.508274
glnS c0766 glutaminyl-tRNA synthetasechromosome CDS747912 1665 + 0.527928
gltX c2936 glutamyl-tRNA synthetasechromosome CDS2800291 1416 - 0.526836
glyQ c4379 glycyl-tRNA synthetase alpha subunitchromosome CDS4162040 912 - 0.560307
glyS c4378 glycyl-tRNA synthetase beta subunitchromosome CDS4159961 2070 - 0.552657
gshB c3533 glutathione synthetasechromosome CDS3387833 951 + 0.521556
hemK c1670 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1505970 834 + 0.555156
hisS c3036 histidyl-tRNA synthetasechromosome CDS2907927 1275 - 0.545882
ileS c0030 isoleucyl-tRNA synthetasechromosome CDS24653 2817 + 0.547746
infA c1021 translation initiation factor IF-1chromosome CDS980354 219 - 0.484018
infB c3924 translation initiation factor IF-2chromosome CDS3746975 2673 - 0.531987
infC c2115 Translation initiation factor IF-3chromosome CDS1956064 435 - 0.478161
iucB c3626 IucB proteinchromosome CDS3466470 948 - 0.565401
ksgA c0064 dimethyladenosine transferasechromosome CDS54801 822 - 0.537713
lasT c5490 Hypothetical tRNA/rRNA methyltransferase lasTchromosome CDS5230697 708 + 0.484463
leuS c0733 leucyl-tRNA synthetasechromosome CDS712192 2724 - 0.530103
lysS c3469 lysyl-tRNA synthetasechromosome CDS3330630 1518 - 0.525692
lysS c5138 lysyl-tRNA synthetasechromosome CDS4910097 1545 - 0.474434
map c0203 methionine aminopeptidasechromosome CDS199010 795 - 0.50566
miaA c5255 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5007412 951 + 0.53102
pcnB c0176 Poly(A) polymerasechromosome CDS168278 1419 - 0.558844
pheS c2112 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1953927 996 - 0.545181
pnp c3920 Polyribonucleotide nucleotidyltransferasechromosome CDS3742666 2223 - 0.530364
prfA c1669 peptide chain release factor 1chromosome CDS1504888 1083 + 0.527239
prfB c5622 peptide chain release factor 2chromosome CDS3332157 1098 - 0.534608
prfC c5456 peptide chain release factor 3chromosome CDS5198335 1590 + 0.543396
prfH c0382 peptide chain release factor 2chromosome CDS361716 615 + 0.543089
prmA c4024 ribosomal protein L11 methyltransferasechromosome CDS3840838 882 + 0.544218
proS c0235 prolyl-tRNA synthetasechromosome CDS228476 1773 - 0.539763
pth c1662 peptidyl-tRNA hydrolasechromosome CDS1497805 585 - 0.500855
queA c0515 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS499203 1071 + 0.53408
rbfA c3923 ribosome-binding factor Achromosome CDS3746410 420 - 0.519048
rhlB c4700 ATP-dependent RNA helicasechromosome CDS4464529 1266 - 0.522117
rhlE c0880 Putative ATP-dependent RNA helicase rhlEchromosome CDS853494 1362 + 0.563142
rimJ c1333 Ribosomal-protein-alanine acetyltransferasechromosome CDS1269062 585 + 0.494017
rimK c0985 Ribosomal protein S6 modification proteinchromosome CDS946342 903 + 0.559247
rimL c1851 Ribosomal-protein-serine acetyltransferasechromosome CDS1691409 555 + 0.428829
rluC c1355 Ribosomal large subunit pseudouridine synthase Cchromosome CDS1288440 960 + 0.515625
rna c0699 Ribonuclease I precursorchromosome CDS684789 825 - 0.515152
rnd c2208 Ribonuclease Dchromosome CDS2038536 1128 - 0.539007
rne c1353 Ribonuclease Echromosome CDS1284682 3186 - 0.557753
rnpA c4628 ribonuclease Pchromosome CDS4386230 360 + 0.561111
rph c4467 ribonuclease PHchromosome CDS4246832 741 - 0.554656
rplA c4940 50S ribosomal protein L1chromosome CDS4711127 705 + 0.514894
rplB c4085 50S ribosomal protein L2chromosome CDS3881919 822 - 0.526764
rplC c4091 50S ribosomal protein L3chromosome CDS3883673 630 - 0.514286
rplD c4089 50S ribosomal protein L4chromosome CDS3883057 606 - 0.531353
rplE c4072 50S ribosomal protein L5chromosome CDS3878275 540 - 0.496296
rplF c4068 50S ribosomal protein L6chromosome CDS3876983 534 - 0.522472
rplI c5294 50S ribosomal protein L9chromosome CDS5034176 450 + 0.497778
rplJ c4941 50S ribosomal protein L10chromosome CDS4712123 498 + 0.524096
rplK c4939 50S ribosomal protein L11chromosome CDS4710695 429 + 0.517483
rplL c4943 50S ribosomal protein L7/L12chromosome CDS4712687 366 + 0.461749
rplM c3985 50S ribosomal protein L13chromosome CDS3801703 504 - 0.488095
rplN c4075 50S ribosomal protein L14chromosome CDS3879154 372 - 0.510753
rplO c4062 50S ribosomal protein L15chromosome CDS3875481 435 - 0.535632
rplP c4079 50S ribosomal protein L16chromosome CDS3880135 411 - 0.515815
rplQ c4055 50S ribosomal protein L17chromosome CDS3870992 384 - 0.533854
rplR c4066 50S ribosomal protein L18chromosome CDS3876620 354 - 0.536723
rplS c3127 50S ribosomal protein L19chromosome CDS3006881 348 - 0.482759
rplT c2113 50S ribosomal protein L20chromosome CDS1955361 357 - 0.487395
rplV c4082 50S ribosomal protein L22chromosome CDS3881277 333 - 0.498498
rplW c4087 50S ribosomal protein L23chromosome CDS3882758 303 - 0.481848
rplX c4073 50S ribosomal protein L24chromosome CDS3878829 315 - 0.457143
rplY c2722 50S ribosomal protein L25chromosome CDS2572958 381 + 0.485564
rpmA c3942 50S ribosomal protein L27chromosome CDS3766350 258 - 0.5
rpmB c4461 50S ribosomal protein L28chromosome CDS4242436 237 - 0.531646
rpmC c4077 50S ribosomal protein L29chromosome CDS3879944 192 - 0.541667
rpmD c4063 50S ribosomal protein L30chromosome CDS3875919 180 - 0.5
rpmG c4460 50S ribosomal protein L33chromosome CDS4242248 168 - 0.404762
rpmH c4627 50S ribosomal protein L34chromosome CDS4386073 141 + 0.51773
rpsA c1049 30S ribosomal protein S1chromosome CDS1012956 1674 + 0.511947
rpsB c0204 30S ribosomal protein S2chromosome CDS199974 924 + 0.504329
rpsC c4080 30S ribosomal protein S3chromosome CDS3880558 702 - 0.509971
rpsD c4057 30S ribosomal protein S4chromosome CDS3872431 621 - 0.507246
rpsE c4065 30S ribosomal protein S5chromosome CDS3876102 504 - 0.5
rpsF c5291 30S ribosomal protein S6chromosome CDS5033186 396 + 0.527778
rpsG c4114 30S ribosomal protein S7chromosome CDS3904999 471 - 0.496815
rpsH c4070 30S ribosomal protein S8chromosome CDS3877529 393 - 0.501272
rpsI c3984 30S ribosomal protein S9chromosome CDS3801295 393 - 0.521628
rpsJ c4092 30S ribosomal protein S10chromosome CDS3884335 312 - 0.554487
rpsK c4058 30S ribosomal protein S11chromosome CDS3873085 390 - 0.515385
rpsL c4116 30S ribosomal protein S12chromosome CDS3905566 435 - 0.508046
rpsM c4060 30S ribosomal protein S13chromosome CDS3873491 357 - 0.518207
rpsN c4071 30S ribosomal protein S14chromosome CDS3877955 306 - 0.526144
rpsO c3921 30S ribosomal protein S15chromosome CDS3745048 270 - 0.518519
rpsP c3130 30S ribosomal protein S16chromosome CDS3008635 309 - 0.511327
rpsQ c4076 30S ribosomal protein S17chromosome CDS3879690 255 - 0.47451
rpsR c5292 30S ribosomal protein S18chromosome CDS5033907 228 + 0.526316
rpsS c4083 30S ribosomal protein S19chromosome CDS3881624 279 - 0.491039
rpsT c0027 30S ribosomal protein S20chromosome CDS23077 264 - 0.462121
rpsU c3816 30S ribosomal protein S21chromosome CDS3651375 216 + 0.518519
rsmC c5450 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS5195590 1032 - 0.55814
rsuA c2720 Ribosomal small subunit pseudouridine synthase Achromosome CDS2570324 792 - 0.522727
rumA c3348 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3188517 1302 - 0.509985
selB c4411 Selenocysteine-specific elongation factorchromosome CDS4193717 1845 - 0.565854
serS c1030 seryl-tRNA synthetasechromosome CDS993610 1293 + 0.526682
sfhB c3116 Ribosomal large subunit pseudouridine synthase Dchromosome CDS2997732 981 - 0.530071
speG c1974 Spermidine N(1)-acetyltransferasechromosome CDS1816891 561 + 0.468806
spoU c4476 tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS4255517 690 + 0.556522
srmB c3100 ATP-dependent RNA helicase srmBchromosome CDS2975763 1335 + 0.546816
sun c4049 SUN proteinchromosome CDS3866580 1290 + 0.49845
tgt c0516 queuine tRNA-ribosyltransferasechromosome CDS500328 1128 + 0.512411
thrS c2116 threonyl-tRNA synthetasechromosome CDS1956610 1929 - 0.494038
trmA c4928 tRNA (uracil-5-)-methyltransferasechromosome CDS4694574 1101 - 0.503179
trmD c3128 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3007270 768 - 0.533854
trpS c4154 tryptophanyl-tRNA synthetasechromosome CDS3938687 1005 - 0.524378
truA c2863 tRNA pseudouridine synthase Achromosome CDS2716624 813 - 0.557196
truB c3922 tRNA pseudouridine synthase Bchromosome CDS3745466 945 - 0.528042
tsf c0206 elongation factor Tschromosome CDS201032 852 + 0.495305
tuf c4111 elongation factor Tuchromosome CDS3901533 1230 - 0.531707
tuf c4935 elongation factor Tuchromosome CDS4708192 1185 + 0.531646
tyrS c2029 tyrosyl-tRNA synthetasechromosome CDS1876477 1287 - 0.51826
valS c5358 valyl-tRNA synthetasechromosome CDS5099818 2856 - 0.55042
yabO c0069 Ribosomal large subunit pseudouridine synthase Achromosome CDS61489 660 - 0.542424
yadB c0177 glutamyl-tRNA synthetasechromosome CDS169735 927 - 0.536138
yadP c0180 2'-5' RNA ligasechromosome CDS172050 540 - 0.564815
yaeJ c0230 hypothetical proteinchromosome CDS224867 423 + 0.543735
ybjF c0992 23S rRNA (uracil-5-)-methyltransferasechromosome CDS952882 1128 + 0.542553
ycdK c1147 Hypothetical protein ycdKchromosome CDS1105268 387 - 0.547804
ycfB c1512 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1393561 1152 - 0.532118
ychF c1661 Probable GTP-binding protein ychFchromosome CDS1496597 1092 - 0.513736
yciH c1751 hypothetical proteinchromosome CDS1586948 330 + 0.493939
yciL c1734 Hypothetical protein yciLchromosome CDS1570452 876 + 0.534247
yciO c1732 Protein yciOchromosome CDS1567666 657 + 0.499239
yeiP c2708 elongation factor Pchromosome CDS2555730 828 + 0.503623
yfbG c2797 hypothetical proteinchromosome CDS2654421 1983 + 0.509329
yfcB c2876 Hypothetical adenine-specific methylase yfcBchromosome CDS2729306 1266 - 0.522907
yfhC c3082 Hypothetical protein yfhCchromosome CDS2960221 537 - 0.52514
yfhQ c3058 Hypothetical tRNA/rRNA methyltransferase yfhQchromosome CDS2930583 741 - 0.54251
yfiA c3119 Protein yfiAchromosome CDS2999854 342 + 0.461988
yfiF c3106 Hypothetical tRNA/rRNA methyltransferase yfiFchromosome CDS2980183 1113 - 0.566038
yfjA c3129 16S rRNA-processing proteinchromosome CDS3008068 558 - 0.489247
ygjO c3842 Putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3674810 1137 - 0.540018
yhaR c3871 TdcF proteinchromosome CDS3699101 453 - 0.518764
yhbH c3963 Probable sigma(54) modulation proteinchromosome CDS3779666 288 + 0.447917
yhbY c3937 Hypothetical protein yhbYchromosome CDS3761422 294 + 0.486395
yhdG c4026 Hypothetical protein yhdGchromosome CDS3842048 966 + 0.519669
yibK c4428 Hypothetical tRNA/rRNA methyltransferase yibKchromosome CDS4215398 474 + 0.548523
yicN c4587 Hypothetical protein yicNchromosome CDS4346744 480 - 0.527083
yihZ c4834 D-tyrosyl-tRNA deacylasechromosome CDS4599117 438 + 0.545662
yjbC c4988 Hypothetical protein yjbCchromosome CDS4766160 873 + 0.505155
yjbN c5018 Hypothetical protein yjbNchromosome CDS4792189 996 + 0.538153
yjeA c5243 lysyl-tRNA synthetasechromosome CDS4991283 1059 + 0.519358
yjeJ c5230 Hypothetical protein yjeJchromosome CDS4982246 870 - 0.452874
yjfH c5264 Hypothetical tRNA/rRNA methyltransferase yjfHchromosome CDS5017346 732 + 0.564208
yjgF c5342 Protein yjgFchromosome CDS5087601 459 - 0.511983
ykgM c0407 50S ribosomal protein L31chromosome CDS387632 267 - 0.460674
yleA c0747 Hypothetical protein yleAchromosome CDS726403 1425 - 0.548772
yliG c0920 Hypothetical protein yliGchromosome CDS897604 1326 - 0.522624
yoaB c2213 Hypothetical protein yoaBchromosome CDS2044991 393 + 0.508906
yohI c2672 Hypothetical protein yohIchromosome CDS2521130 1017 - 0.531957
yqcB c3357 Hypothetical protein yqcBchromosome CDS3197819 783 - 0.542784
yrdC c4043 Protein yrdCchromosome CDS3862210 618 - 0.524272
yrfH c4171 Heat shock protein 15chromosome CDS3955401 402 + 0.527363
 
Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS b2697 alanyl-tRNA synthetasechromosome CDS2817403 2631 - 0.536298
ansA b1767 cytoplasmic asparaginase Ichromosome CDS1848884 1017 + 0.511308
ansB b2957 periplasmic L-asparaginase IIchromosome CDS3097704 1047 - 0.526266
argS b1876 arginyl-tRNA synthetasechromosome CDS1958086 1734 + 0.532872
asnS b0930 asparaginyl-tRNA synthetasechromosome CDS986808 1401 - 0.523911
aspS b1866 aspartyl-tRNA synthetasechromosome CDS1946774 1773 - 0.537507
cca b3056 fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatasechromosome CDS3199913 1239 + 0.56255
cysS b0526 cysteinyl-tRNA synthetasechromosome CDS553834 1386 + 0.544733
dbpA b1343 ATP-dependent RNA helicase, specific for 23S rRNAchromosome CDS1407535 1374 + 0.519651
deaD b3162 ATP-dependent RNA helicasechromosome CDS3303993 1890 - 0.555556
def b3287 peptide deformylasechromosome CDS3431712 510 + 0.462745
dtd b3887 D-tyrosyl-tRNA deacylasechromosome CDS4075038 438 + 0.550228
dusB b3260 tRNA-dihydrouridine synthase Bchromosome CDS3408302 966 + 0.522774
dusC b2140 tRNA-dihydrouridine synthase Cchromosome CDS2227460 948 - 0.542194
efp b4147 elongation factor Pchromosome CDS4373722 567 + 0.493827
flxA b1566 Qin prophage; predicted proteinchromosome CDS1644429 333 + 0.429429
fmt b3288 methionyl-tRNA formyltransferasechromosome CDS3432236 948 + 0.528481
frr b0172 ribosome releasing factorchromosome CDS192872 558 + 0.508961
fusA b3340 elongation factor EF-2chromosome CDS3469422 2115 - 0.508274
glnS b0680 glutaminyl-tRNA synthetasechromosome CDS705316 1665 + 0.524925
gltX b2400 glutamyl-tRNA synthetasechromosome CDS2517279 1416 - 0.525424
glyQ b3560 glycyl-tRNA synthetase subunit alphachromosome CDS3722430 912 - 0.561404
glyS b3559 glycyl-tRNA synthetase subunit betachromosome CDS3720351 2070 - 0.554106
gshB b2947 glutathione synthetasechromosome CDS3089900 951 + 0.534175
hisS b2514 histidyl-tRNA synthetasechromosome CDS2637323 1275 - 0.547451
hslR b3400 ribosome-associated heat shock protein Hsp15chromosome CDS3527370 402 + 0.534826
ileS b0026 isoleucyl-tRNA synthetasechromosome CDS22391 2817 + 0.557685
infA b0884 translation initiation factor IF-1chromosome CDS925448 219 - 0.484018
infB b3168 translation initiation factor IF-2chromosome CDS3311364 2673 - 0.534231
infC b1718 translation initiation factor IF-3chromosome CDS1798120 543 - 0.486188
kptA b4331 RNA 2'-phosphotransferase-like proteinchromosome CDS4558953 555 + 0.508108
ksgA b0051 dimethyladenosine transferasechromosome CDS51609 822 - 0.530414
leuS b0642 leucyl-tRNA synthetasechromosome CDS671424 2583 - 0.533488
ligT b0147 2'-5' RNA ligasechromosome CDS161501 531 - 0.559322
lysS b2890 lysine tRNA synthetase, constitutivechromosome CDS3031679 1518 - 0.530962
lysU b4129 lysine tRNA synthetase, induciblechromosome CDS4351223 1518 - 0.474308
map b0168 methionine aminopeptidasechromosome CDS188712 795 - 0.504403
miaA b4171 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4397275 951 + 0.534175
miaB b0661 isopentenyl-adenosine A37 tRNA methylthiolasechromosome CDS692754 1425 - 0.541754
pcnB b0143 poly(A) polymerase Ichromosome CDS157729 1398 - 0.558655
pheS b1714 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1795983 984 - 0.538618
pnp b3164 polynucleotide phosphorylase/polyadenylasechromosome CDS3307055 2205 - 0.536961
poxA b4155 lysyl-tRNA synthetasechromosome CDS4380666 978 + 0.526585
prfA b1211 peptide chain release factor 1chromosome CDS1264235 1083 + 0.530009
prfB b2891 peptide chain release factor 2chromosome CDS3033206 1098 - 0.535519
prfC b4375 peptide chain release factor 3chromosome CDS4607437 1590 + 0.540252
prfH b0236 peptide chain release factor 2chromosome CDS253702 501 + 0.542914
prmA b3259 ribosomal protein L11 methyltransferasechromosome CDS3407092 882 + 0.543084
prmB b2330 N5-glutamine methyltransferasechromosome CDS2445530 933 - 0.525188
prmC b1212 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1265317 834 + 0.551559
proS b0194 prolyl-tRNA synthetasechromosome CDS217057 1719 - 0.545084
pth b1204 peptidyl-tRNA hydrolasechromosome CDS1257152 585 - 0.497436
queA b0405 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS424235 1071 + 0.54155
rbfA b3167 ribosome-binding factor Achromosome CDS3310799 402 - 0.529851
relE b1563 Qin prophage; toxin of the RelE-RelB toxin-antitoxin systemchromosome CDS1643370 288 - 0.46875
rhlB b3780 ATP-dependent RNA helicasechromosome CDS3962388 1266 - 0.525276
rhlE b0797 RNA helicasechromosome CDS830095 1365 + 0.567033
rimJ b1066 ribosomal-protein-S5-alanine N-acetyltransferasechromosome CDS1124785 585 + 0.494017
rimK b0852 ribosomal protein S6 modification proteinchromosome CDS891190 903 + 0.562569
rimL b1427 ribosomal-protein-L7/L12-serine acetyltransferasechromosome CDS1496962 540 + 0.433333
rimM b2608 16S rRNA-processing proteinchromosome CDS2743392 549 - 0.489982
rlmB b4180 23S rRNA (Gm2251)-methyltransferasechromosome CDS4407298 732 + 0.562842
rluA b0058 pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)chromosome CDS59687 660 - 0.539394
rluB b1269 23S rRNA pseudouridylate synthasechromosome CDS1324876 876 + 0.537671
rluC b1086 23S rRNA pseudouridylate synthasechromosome CDS1144163 960 + 0.514583
rluD b2594 23S rRNA pseudouridine synthasechromosome CDS2733053 981 - 0.528033
rmf b0953 ribosome modulation factorchromosome CDS1014938 168 + 0.541667
rna b0611 ribonuclease Ichromosome CDS643420 807 - 0.511772
rnd b1804 ribonuclease Dchromosome CDS1884888 1128 - 0.54078
rne b1084 fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding proteinchromosome CDS1140405 3186 - 0.556497
rng b3247 ribonuclease Gchromosome CDS3394348 1470 - 0.521088
rnpA b3704 ribonuclease Pchromosome CDS3882516 360 + 0.558333
rph b3643 ribonuclease PHchromosome CDS3813886 687 - 0.561863
rplA b3984 50S ribosomal protein L1chromosome CDS4176902 705 + 0.516312
rplB b3317 50S ribosomal protein L2chromosome CDS3448565 822 - 0.526764
rplC b3320 50S ribosomal protein L3chromosome CDS3450319 630 - 0.514286
rplD b3319 50S ribosomal protein L4chromosome CDS3449703 606 - 0.529703
rplE b3308 50S ribosomal protein L5chromosome CDS3444921 540 - 0.498148
rplF b3305 50S ribosomal protein L6chromosome CDS3443629 534 - 0.520599
rplI b4203 50S ribosomal protein L9chromosome CDS4424131 450 + 0.497778
rplJ b3985 50S ribosomal protein L10chromosome CDS4178019 498 + 0.524096
rplK b3983 50S ribosomal protein L11chromosome CDS4176470 429 + 0.522144
rplL b3986 50S ribosomal protein L7/L12chromosome CDS4178583 366 + 0.461749
rplM b3231 50S ribosomal protein L13chromosome CDS3376245 429 - 0.505827
rplN b3310 50S ribosomal protein L14chromosome CDS3445800 372 - 0.510753
rplO b3301 50S ribosomal protein L15chromosome CDS3442127 435 - 0.535632
rplP b3313 50S ribosomal protein L16chromosome CDS3446781 411 - 0.518248
rplQ b3294 50S ribosomal protein L17chromosome CDS3437638 384 - 0.536458
rplR b3304 50S ribosomal protein L18chromosome CDS3443266 354 - 0.536723
rplS b2606 50S ribosomal protein L19chromosome CDS2742205 348 - 0.482759
rplT b1716 50S ribosomal protein L20chromosome CDS1797417 357 - 0.481793
rplU b3186 50S ribosomal protein L21chromosome CDS3331162 312 - 0.483974
rplV b3315 50S ribosomal protein L22chromosome CDS3447923 333 - 0.498498
rplW b3318 50S ribosomal protein L23chromosome CDS3449404 303 - 0.481848
rplX b3309 50S ribosomal protein L24chromosome CDS3445475 315 - 0.460317
rplY b2185 50S ribosomal protein L25chromosome CDS2280539 285 + 0.505263
rpmA b3185 50S ribosomal protein L27chromosome CDS3330884 258 - 0.5
rpmB b3637 50S ribosomal protein L28chromosome CDS3809461 237 - 0.531646
rpmC b3312 50S ribosomal protein L29chromosome CDS3446590 192 - 0.541667
rpmD b3302 50S ribosomal protein L30chromosome CDS3442565 180 - 0.5
rpmE b3936 50S ribosomal subunit protein L31chromosome CDS4125036 213 + 0.492958
rpmF b1089 50S ribosomal protein L32chromosome CDS1146590 174 + 0.54023
rpmG b3636 50S ribosomal protein L33chromosome CDS3809273 168 - 0.404762
rpmH b3703 50S ribosomal protein L34chromosome CDS3882359 141 + 0.51773
rpmI b1717 50S ribosomal protein L35chromosome CDS1797826 198 - 0.5
rpmJ b3299 50S ribosomal protein L36chromosome CDS3440640 117 - 0.478632
rpsA b0911 30S ribosomal protein S1chromosome CDS961218 1674 + 0.511947
rpsB b0169 30S ribosomal protein S2chromosome CDS189874 726 + 0.513774
rpsC b3314 30S ribosomal protein S3chromosome CDS3447204 702 - 0.509971
rpsD b3296 30S ribosomal protein S4chromosome CDS3439077 621 - 0.507246
rpsE b3303 30S ribosomal protein S5chromosome CDS3442748 504 - 0.501984
rpsF b4200 30S ribosomal protein S6chromosome CDS4423141 396 + 0.525253
rpsG b3341 30S ribosomal protein S7chromosome CDS3471564 540 - 0.501852
rpsH b3306 30S ribosomal protein S8chromosome CDS3444175 393 - 0.501272
rpsI b3230 30S ribosomal protein S9chromosome CDS3375837 393 - 0.524173
rpsJ b3321 30S ribosomal protein S10chromosome CDS3450981 312 - 0.554487
rpsK b3297 30S ribosomal protein S11chromosome CDS3439731 390 - 0.515385
rpsL b3342 30S ribosomal protein S12chromosome CDS3472200 375 - 0.533333
rpsM b3298 30S ribosomal protein S13chromosome CDS3440137 357 - 0.518207
rpsN b3307 30S ribosomal protein S14chromosome CDS3444601 306 - 0.526144
rpsO b3165 30S ribosomal protein S15chromosome CDS3309437 270 - 0.518519
rpsP b2609 30S ribosomal protein S16chromosome CDS2743959 249 - 0.514056
rpsQ b3311 30S ribosomal protein S17chromosome CDS3446336 255 - 0.47451
rpsR b4202 30S ribosomal protein S18chromosome CDS4423862 228 + 0.526316
rpsS b3316 30S ribosomal protein S19chromosome CDS3448270 279 - 0.487455
rpsT b0023 30S ribosomal protein S20chromosome CDS20815 264 - 0.465909
rpsU b3065 30S ribosomal protein S21chromosome CDS3208803 216 + 0.518519
rrmJ b3179 23S rRNA methyltransferasechromosome CDS3325057 630 - 0.504762
rsmB b3289 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependentchromosome CDS3433229 1290 + 0.496899
rsmC b4371 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4604692 1032 - 0.557171
rsuA b2183 16S rRNA pseudouridylate 516 synthasechromosome CDS2277810 696 - 0.528736
rumA b2785 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2911721 1302 - 0.514593
rumB b0859 23S rRNA m(5)U747-methyltransferasechromosome CDS897741 1128 + 0.546099
selB b3590 selenocysteinyl-tRNA-specific translation factorchromosome CDS3756040 1845 - 0.563686
serS b0893 seryl-tRNA synthetasechromosome CDS938651 1293 + 0.526682
smpA b2617 small membrane lipoproteinchromosome CDS2751627 342 + 0.494152
speG b1584 spermidine N1-acetyltransferasechromosome CDS1654208 561 + 0.468806
srmB b2576 ATP-dependent RNA helicasechromosome CDS2710918 1335 + 0.547566
tadA b2559 tRNA-specific adenosine deaminasechromosome CDS2695376 537 - 0.541899
tdcF b3113 predicted L-PSP (mRNA) endoribonucleasechromosome CDS3257743 390 - 0.525641
tgt b0406 queuine tRNA-ribosyltransferasechromosome CDS425361 1128 + 0.513298
thrS b1719 threonyl-tRNA synthetasechromosome CDS1798666 1929 - 0.495594
trmA b3965 tRNA (uracil-5-)-methyltransferasechromosome CDS4160193 1101 - 0.508629
trmD b2607 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2742594 768 - 0.533854
trmH b3651 tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS3822538 690 + 0.553623
trmU b1133 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1191890 1107 - 0.537489
trpS b3384 tryptophanyl-tRNA synthetasechromosome CDS3510656 1005 - 0.520398
truA b2318 tRNA pseudouridine synthase Achromosome CDS2432846 813 - 0.553506
truB b3166 tRNA pseudouridine synthase Bchromosome CDS3309855 945 - 0.524868
tsf b0170 elongation factor Tschromosome CDS190857 852 + 0.498826
tufA b3339 protein chain elongation factor EF-Tu (duplicate of tufB)chromosome CDS3468167 1185 - 0.532489
tufB b3980 protein chain elongation factor EF-Tu (duplicate of tufA)chromosome CDS4173967 1185 + 0.534177
tyrS b1637 tyrosyl-tRNA synthetasechromosome CDS1713972 1275 - 0.515294
valS b4258 valyl-tRNA synthetasechromosome CDS4479005 2856 - 0.545868
yadB b0144 glutamyl-Q tRNA(Asp) synthetasechromosome CDS159186 927 - 0.536138
yaeJ b0191 hypothetical proteinchromosome CDS214833 423 + 0.541371
yaiX_1 b0362 chromosome pseudo381728 387 - 0.45478
ybfP b0689 hypothetical proteinchromosome CDS714635 495 + 0.454545
ycdK b1010 hypothetical proteinchromosome CDS1070996 387 - 0.540052
ychF b1203 translation-associated GTPasechromosome CDS1255944 1092 - 0.510073
yciH b1282 translation intiation factor Sui1chromosome CDS1340682 327 + 0.498471
yciO b1267 hypothetical proteinchromosome CDS1322122 621 + 0.481481
yebU b1835 predicted methyltransferasechromosome CDS1918247 1440 + 0.518056
yeiP b2171 elongation factor Pchromosome CDS2263472 573 + 0.499127
yfbG b2255 hypothetical proteinchromosome CDS2366061 1983 + 0.511346
yfhQ b2532 predicted methyltransferasechromosome CDS2660605 741 - 0.554656
yfiA b2597 cold shock protein associated with 30S ribosomal subunitchromosome CDS2735176 342 + 0.461988
yfiF b2581 predicted methyltransferasechromosome CDS2715513 1038 - 0.56262
ygjO b3084 predicted methyltransferase small domainchromosome CDS3232761 1137 - 0.538259
yhbH b3203 predicted ribosome-associated, sigma 54 modulation proteinchromosome CDS3344195 288 + 0.447917
yhbY b3180 predicted RNA-binding proteinchromosome CDS3325812 294 + 0.486395
yibK b3606 predicted rRNA methylasechromosome CDS3779238 474 + 0.550633
yjbC b4022 23S rRNA pseudouridine synthasechromosome CDS4228377 873 + 0.515464
yjbN b4049 tRNA-dihydrouridine synthase Achromosome CDS4259692 1038 + 0.536609
yjeJ b4145 hypothetical proteinchromosome CDS4371388 870 - 0.451724
yjgF b4243 ketoacid-binding proteinchromosome CDS4468550 387 - 0.529716
yjgH b4248 predicted mRNA endoribonucleasechromosome CDS4470837 396 - 0.472222
yjtD b4403 predicted rRNA methyltransferasechromosome CDS4638965 687 + 0.497817
ykgM b0296 50S ribosomal protein L31chromosome CDS311738 264 - 0.458333
ykgO b4506 rpmJ (L36) paralogchromosome CDS311598 141 - 0.41844
yliG b0835 predicted SAM-dependent methyltransferasechromosome CDS875933 1326 - 0.526395
ymfC b1135 23S rRNA pseudouridine synthasechromosome CDS1193521 654 - 0.512232
ymjA b1295 hypothetical proteinchromosome CDS1355447 246 - 0.48374
yoaB b1809 hypothetical proteinchromosome CDS1891391 345 + 0.515942
yqcB b2791 tRNA pseudouridine synthasechromosome CDS2921024 783 - 0.54023
yrdC b3282 predicted ribosome maturation factorchromosome CDS3428865 573 - 0.521815
 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z1494 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1378557 1266 + 0.49763
NA Z2291 hypothetical proteinchromosome CDS2071732 297 - 0.40404
NA Z3799 putative ATP synthase beta subunitchromosome CDS3452924 738 - 0.548781
NA Z3518 hypothetical proteinchromosome CDS3173741 267 - 0.464419
NA Z1152 50S ribosomal protein L31chromosome CDS1084759 264 + 0.42803
NA Z5930 hypothetical proteinchromosome CDS5445654 447 + 0.478747
NA Z2852 hypothetical proteinchromosome CDS2570352 393 + 0.508906
NA Z1509 hypothetical proteinchromosome CDS1396365 387 - 0.537468
NA Z1591 50S ribosomal protein L31chromosome CDS1480366 264 + 0.42803
NA Z2972 unknown protein encoded by prophage CP-933Tchromosome CDS2671678 279 + 0.426523
NA Z5118 hypothetical proteinchromosome CDS4674297 378 - 0.354497
NA Z4107 hypothetical proteinchromosome CDS3712700 783 - 0.537676
NA Z3513 hypothetical proteinchromosome CDS3168508 1983 + 0.515381
NA Z1768 unknown protein encoded by prophage CP-933Nchromosome CDS1628545 633 + 0.42496
alaS Z3999 alanyl-tRNA synthetasechromosome CDS3610595 2637 - 0.535078
ansA Z2801 cytoplasmic asparaginase Ichromosome CDS2526366 1017 + 0.505408
ansB Z4302 periplasmic L-asparaginase IIchromosome CDS3908588 1047 - 0.528176
argS Z2929 arginyl-tRNA synthetasechromosome CDS2637203 1734 + 0.529412
asnS Z1278 asparaginyl-tRNA synthetasechromosome CDS1206279 1401 - 0.526767
aspS Z2919 aspartyl-tRNA synthetasechromosome CDS2625888 1773 - 0.540327
cafA Z4605 bundles of cytoplasmic filamentschromosome CDS4198504 1488 - 0.521505
cca Z4409 tRNA nucleotidyl transferasechromosome CDS4008734 1239 + 0.563358
cysS Z0681 cysteinyl-tRNA synthetasechromosome CDS646757 1386 + 0.546898
dbpA Z2417 ATP-dependent RNA helicasechromosome CDS2166810 1374 - 0.517467
deaD Z4523 inducible ATP-independent RNA helicasechromosome CDS4115684 1941 - 0.548686
def Z4657 peptide deformylasechromosome CDS4235924 510 + 0.466667
efp Z5752 elongation factor Pchromosome CDS5259965 567 + 0.499118
espF Z5100 espFchromosome CDS4658240 747 - 0.543507
fmt Z4658 methionyl-tRNA formyltransferasechromosome CDS4236448 948 + 0.525316
frr Z0183 ribosome releasing factorchromosome CDS196217 558 + 0.508961
ftsJ Z4541 cell division proteinchromosome CDS4136749 630 - 0.504762
fusA Z4698 elongation factor EF-2chromosome CDS4258528 2115 - 0.506856
glnS Z0827 glutaminyl-tRNA synthetasechromosome CDS785897 1665 + 0.524324
gltX Z3665 glutamyl-tRNA synthetasechromosome CDS3317632 1416 - 0.530367
glyQ Z4984 glycyl-tRNA synthetase alpha subunitchromosome CDS4537806 912 - 0.555921
glyS Z4983 glycyl-tRNA synthetase beta subunitchromosome CDS4535727 2070 - 0.55314
gshB Z4292 glutathione synthetasechromosome CDS3900685 948 + 0.531646
hemK Z1983 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1803382 834 + 0.557554
hisS Z3777 histidyl-tRNA synthetasechromosome CDS3425278 1275 - 0.546667
ileS Z0030 isoleucyl-tRNA synthetasechromosome CDS26803 2817 + 0.556975
infA Z1228 translation initiation factor IF-1chromosome CDS1146525 219 - 0.484018
infB Z4529 translation initiation factor IF-2chromosome CDS4123056 2673 - 0.533857
infC Z2747 Initiation factor IF-3chromosome CDS2475011 435 - 0.478161
ksgA Z0060 dimethyladenosine transferasechromosome CDS56585 822 - 0.53163
lasT Z6006 hypothetical proteinchromosome CDS5527735 687 + 0.496361
leuS Z0789 leucyl-tRNA synthetasechromosome CDS753340 2583 - 0.531165
lysS Z5732 lysyl-tRNA synthetasechromosome CDS5237635 1518 - 0.478261
lysS Z4228 lysyl-tRNA synthetasechromosome CDS3839114 1518 - 0.523715
map Z0178 methionine aminopeptidasechromosome CDS192199 795 - 0.498113
miaA Z5778 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5282962 951 + 0.534175
pcnB Z0154 poly(A) polymerase Ichromosome CDS162052 1365 - 0.559707
pheS Z2743 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2472875 984 - 0.54065
pmrD Z3519 polymyxin resistance protein Bchromosome CDS3173741 297 - 0.447811
pnp Z4525 polynucleotide phosphorylase; cytidylate kinase activitychromosome CDS4118746 2205 - 0.534694
prfA Z1982 peptide chain release factor 1chromosome CDS1802300 1083 + 0.529086
prfB Z4229 peptide chain release factor 2chromosome CDS3840641 1098 - 0.535519
prfC Z5976 peptide chain release factor 3chromosome CDS5497454 1590 + 0.539623
prfH Z0297 peptide chain release factor 2chromosome CDS291590 501 + 0.552894
prmA Z4619 ribosomal protein L11 methyltransferasechromosome CDS4211248 882 + 0.544218
proS Z0206 prolyl-tRNA synthetasechromosome CDS220389 1719 - 0.545084
pth Z1975 peptidyl-tRNA hydrolasechromosome CDS1795217 585 - 0.500855
queA Z0504 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS488643 1071 + 0.54155
rbfA Z4528 ribosome-binding factor Achromosome CDS4122490 402 - 0.524876
rhlB Z5290 ATP-dependent RNA helicasechromosome CDS4826756 1266 - 0.525276
rhlE Z1017 putative ATP-dependent RNA helicasechromosome CDS954892 1368 + 0.562865
rimJ Z1703 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5chromosome CDS1569792 585 + 0.497436
rimK Z1079 ribosomal protein S6 modification proteinchromosome CDS1018913 903 + 0.559247
rmf Z1303 ribosome modulation factorchromosome CDS1234409 168 + 0.541667
rna Z0755 RNase I, cleaves phosphodiester bond between any two nucleotideschromosome CDS725333 807 - 0.515489
rnd Z2847 RNase D, processes tRNA precursorchromosome CDS2563897 1128 - 0.541667
rne Z1722 RNase E, membrane attachment, mRNA turnover, maturation 5S RNAchromosome CDS1585374 3186 - 0.55838
rnpA Z5195 ribonuclease Pchromosome CDS4739709 360 + 0.555556
rph Z5068 ribonuclease PHchromosome CDS4628676 717 - 0.570432
rplA Z5557 50S ribosomal protein L1chromosome CDS5056642 705 + 0.51773
rplB Z4688 50S ribosomal protein L2chromosome CDS4252777 822 - 0.53163
rplC Z4691 50S ribosomal protein L3chromosome CDS4254531 630 - 0.512698
rplD Z4690 50S ribosomal protein L4chromosome CDS4253915 606 - 0.529703
rplE Z4678 50S ribosomal protein L5chromosome CDS4249133 540 - 0.498148
rplF Z4675 50S ribosomal protein L6chromosome CDS4247841 534 - 0.520599
rplI Z5812 50S ribosomal protein L9chromosome CDS5309820 450 + 0.495556
rplJ Z5558 50S ribosomal protein L10chromosome CDS5057638 498 + 0.524096
rplK Z5556 50S ribosomal protein L11chromosome CDS5056210 429 + 0.519814
rplL Z5559 50S ribosomal protein L7/L12chromosome CDS5058202 366 + 0.461749
rplM Z4589 50S ribosomal protein L13chromosome CDS4180676 429 - 0.505827
rplN Z4680 50S ribosomal protein L14chromosome CDS4250012 372 - 0.510753
rplO Z4671 50S ribosomal protein L15chromosome CDS4246339 435 - 0.537931
rplP Z4684 50S ribosomal protein L16chromosome CDS4250993 411 - 0.515815
rplQ Z4664 50S ribosomal protein L17chromosome CDS4241850 384 - 0.536458
rplR Z4674 50S ribosomal protein L18chromosome CDS4247478 354 - 0.536723
rplS Z3900 50S ribosomal protein L19chromosome CDS3534152 348 - 0.482759
rplT Z2745 50S ribosomal protein L20chromosome CDS2474308 357 - 0.484594
rplU Z4549 50S ribosomal protein L21chromosome CDS4142708 312 - 0.483974
rplV Z4686 50S ribosomal protein L22chromosome CDS4252135 333 - 0.498498
rplW Z4689 50S ribosomal protein L23chromosome CDS4253616 303 - 0.481848
rplX Z4679 50S ribosomal protein L24chromosome CDS4249687 315 - 0.463492
rplY Z3444 50S ribosomal protein L25chromosome CDS3088716 285 + 0.498246
rpmA Z4547 50S ribosomal protein L27chromosome CDS4142430 258 - 0.5
rpmB Z5061 50S ribosomal protein L28chromosome CDS4624280 237 - 0.531646
rpmC Z4683 50S ribosomal protein L29chromosome CDS4250802 192 - 0.541667
rpmD Z4672 50S ribosomal protein L30chromosome CDS4246777 180 - 0.5
rpmE Z5484 50S ribosomal subunit protein L31chromosome CDS4997269 213 + 0.492958
rpmF Z1728 50S ribosomal protein L32chromosome CDS1591548 174 + 0.54023
rpmG Z5060 50S ribosomal protein L33chromosome CDS4624092 168 - 0.404762
rpmH Z5194 50S ribosomal protein L34chromosome CDS4739552 141 + 0.51773
rpmI Z2746 50S ribosomal protein L35chromosome CDS2474717 198 - 0.5
rpmJ Z4669 50S ribosomal protein L36chromosome CDS4244852 117 - 0.478632
rpsA Z1257 30S ribosomal protein S1chromosome CDS1180861 1674 + 0.511947
rpsB Z0180 30S ribosomal protein S2chromosome CDS193361 726 + 0.512397
rpsC Z4685 30S ribosomal protein S3chromosome CDS4251416 702 - 0.508547
rpsD Z4666 30S ribosomal protein S4chromosome CDS4243289 621 - 0.507246
rpsE Z4673 30S ribosomal protein S5chromosome CDS4246960 504 - 0.498016
rpsF Z5809 30S ribosomal protein S6chromosome CDS5308830 396 + 0.527778
rpsG Z4699 30S ribosomal protein S7chromosome CDS4260739 471 - 0.496815
rpsH Z4676 30S ribosomal protein S8chromosome CDS4248387 393 - 0.501272
rpsI Z4588 30S ribosomal protein S9chromosome CDS4180268 393 - 0.519084
rpsJ Z4692 30S ribosomal protein S10chromosome CDS4255193 312 - 0.554487
rpsK Z4667 30S ribosomal protein S11chromosome CDS4243943 390 - 0.517949
rpsL Z4700 30S ribosomal protein S12chromosome CDS4261306 375 - 0.533333
rpsM Z4668 30S ribosomal protein S13chromosome CDS4244349 357 - 0.518207
rpsN Z4677 30S ribosomal protein S14chromosome CDS4248813 306 - 0.526144
rpsO Z4526 30S ribosomal protein S15chromosome CDS4121128 270 - 0.522222
rpsP Z3903 30S ribosomal protein S16chromosome CDS3535906 249 - 0.514056
rpsQ Z4681 30S ribosomal protein S17chromosome CDS4250548 255 - 0.47451
rpsR Z5811 30S ribosomal protein S18chromosome CDS5309551 228 + 0.530702
rpsS Z4687 30S ribosomal protein S19chromosome CDS4252482 279 - 0.491039
rpsT Z0027 30S ribosomal protein S20chromosome CDS25221 264 - 0.465909
rpsU Z4418 30S ribosomal protein S21chromosome CDS4017627 216 + 0.518519
rsmC Z5972 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS5494709 1032 - 0.556202
rsuA Z3442 16S pseudouridylate 516 synthasechromosome CDS3085987 696 - 0.530172
rumA Z4100 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3703396 1302 - 0.513825
selB Z5011 selenocysteinyl-tRNA-specific translation factorchromosome CDS4567946 1845 - 0.56206
serS Z1239 seryl-tRNA synthetasechromosome CDS1159763 1293 + 0.527456
sfhB Z3888 suppressor of ftsH mutationchromosome CDS3524999 981 - 0.523955
smpA Z3910 small membrane protein Achromosome CDS3543652 153 + 0.464052
speG Z2571 spermidine N1-acetyltransferasechromosome CDS2331272 561 + 0.467023
spoU Z5077 putative RNA methylasechromosome CDS4637360 690 + 0.553623
srmB Z3859 ATP-dependent RNA helicasechromosome CDS3503108 1335 + 0.546067
sun Z4659 hypothetical proteinchromosome CDS4237441 1290 + 0.49845
tgt Z0505 queuine tRNA-ribosyltransferasechromosome CDS489768 1128 + 0.514184
thrS Z2748 threonyl-tRNA synthetasechromosome CDS2475557 1929 - 0.499741
trmA Z5526 tRNA (uracil-5-)-methyltransferasechromosome CDS5040201 1101 - 0.511353
trmD Z3901 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3534541 768 - 0.53125
trpS Z4737 tryptophanyl-tRNA synthetasechromosome CDS4292052 1005 - 0.526368
truA Z3580 tRNA pseudouridine synthase Achromosome CDS3231133 813 - 0.557196
truB Z4527 tRNA pseudouridine synthase Bchromosome CDS4121546 945 - 0.529101
tsf Z0181 elongation factor Tschromosome CDS194344 852 + 0.497653
tuf Z5553 elongation factor Tuchromosome CDS5053707 1185 + 0.527426
tuf Z4697 elongation factor Tuchromosome CDS4257273 1185 - 0.531646
tyrS Z2650 tyrosyl-tRNA synthetasechromosome CDS2390867 1287 - 0.516706
valS Z5870 valyl-tRNA synthetasechromosome CDS5366382 2856 - 0.551471
yabO Z0066 hypothetical proteinchromosome CDS64620 660 - 0.540909
yadB Z0155 glutamyl-tRNA synthetasechromosome CDS163509 927 - 0.538296
yadP Z0158 hypothetical proteinchromosome CDS165824 540 - 0.559259
yaeJ Z0203 hypothetical proteinchromosome CDS218178 411 + 0.545012
ybjF Z1086 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1025464 1128 + 0.548759
yceC Z1725 hypothetical proteinchromosome CDS1589132 960 + 0.51875
ycfB Z1862 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1698365 1152 - 0.53125
ychF Z1974 putative GTP-binding proteinchromosome CDS1794009 1092 - 0.508242
yciH Z2524 hypothetical proteinchromosome CDS2243485 330 - 0.487879
yciL Z2541 hypothetical proteinchromosome CDS2258742 873 - 0.54181
yciO Z2543 hypothetical proteinchromosome CDS2261438 657 - 0.493151
yeiP Z3430 elongation factor Pchromosome CDS3071392 828 + 0.506039
yfcB Z3593 putative adenine-specific methylasechromosome CDS3243827 1266 - 0.514218
yfhC Z3839 putative deaminasechromosome CDS3487575 537 - 0.528864
yfiA Z3890 putative yhbH sigma 54 modulatorchromosome CDS3527122 342 + 0.461988
yfiF Z3865 hypothetical proteinchromosome CDS3507527 1038 - 0.561657
yfjA Z3902 16S rRNA-processing proteinchromosome CDS3535339 558 - 0.491039
ygjO Z4437 putative enzymechromosome CDS4041585 1137 - 0.541777
yhaR Z4465 hypothetical proteinchromosome CDS4066566 453 - 0.520971
yhbH Z4566 probable sigma-54 modulation proteinchromosome CDS4155742 288 + 0.447917
yhbY Z4542 hypothetical proteinchromosome CDS4137504 294 + 0.486395
yhdG Z4620 putative dehydrogenasechromosome CDS4212458 966 + 0.522774
yibK Z5033 hypothetical proteinchromosome CDS4597029 474 + 0.546413
yicN Z5152 hypothetical proteinchromosome CDS4698066 480 - 0.51875
yihZ Z5426 D-tyrosyl-tRNA deacylasechromosome CDS4942350 438 + 0.547945
yjbC Z5620 hypothetical proteinchromosome CDS5113732 873 + 0.521191
yjbN Z5647 hypothetical proteinchromosome CDS5144808 1038 + 0.532755
yjeA Z5763 lysyl-tRNA synthetasechromosome CDS5266878 1008 + 0.517857
yjeJ Z5750 hypothetical proteinchromosome CDS5257791 870 - 0.449425
yjfH Z5787 hypothetical proteinchromosome CDS5292988 732 + 0.561475
yjgF Z5854 hypothetical proteinchromosome CDS5356050 426 - 0.50939
yjgH Z5860 hypothetical proteinchromosome CDS5358337 396 - 0.472222
yjgL Z5865 hypothetical proteinchromosome CDS5360960 1791 + 0.314908
ykgM Z0364 50S ribosomal protein L31chromosome CDS344923 264 - 0.462121
yleA Z0810 hypothetical proteinchromosome CDS773473 1425 - 0.539649
yliG Z1061 hypothetical proteinchromosome CDS1003656 1326 - 0.526395
ymfC Z1864 hypothetical proteinchromosome CDS1699996 624 - 0.517628
yohI Z3389 putative regulator proteinchromosome CDS3029633 951 - 0.537329
yrdC Z4653 hypothetical proteinchromosome CDS4233077 573 - 0.52356
yrfH Z4754 hypothetical proteinchromosome CDS4308764 402 + 0.532338
 
Escherichia coli O157:H7 str. Sakai, Sakai
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECs5031 hypothetical proteinchromosome CDS5114823 1038 + 0.533719
NA ECs4185 50S ribosomal protein L3chromosome CDS4187309 630 - 0.512698
NA ECs5128 elongation factor Pchromosome CDS5229980 567 + 0.500882
NA ECs3442 ATP-dependent RNA helicasechromosome CDS3433269 1335 + 0.547566
NA ECs4226 tryptophanyl-tRNA synthetasechromosome CDS4224830 1005 - 0.526368
NA ECs3471 16S rRNA-processing proteinchromosome CDS3465490 552 - 0.48913
NA ECs0062 hypothetical proteinchromosome CDS64619 660 - 0.540909
NA ECs5230 hypothetical proteinchromosome CDS5330975 1773 + 0.315849
NA ECs2290 spermidine N1-acetyltransferasechromosome CDS2255987 561 + 0.467023
NA ECs3966 hypothetical proteinchromosome CDS3974370 1137 - 0.542656
NA ECs3147 polymyxin resistance protein Bchromosome CDS3103785 297 - 0.447811
NA ECs1199 putative antirepressor proteinchromosome CDS1263427 735 + 0.465306
NA ECs3425 putative deaminasechromosome CDS3417737 537 - 0.528864
NA ECs4170 50S ribosomal protein L6chromosome CDS4180619 534 - 0.520599
NA ECs4059 hypothetical proteinchromosome CDS4070288 294 + 0.486395
NA ECs4178 50S ribosomal protein L16chromosome CDS4183771 411 - 0.515815
NA ECs1464 hypothetical proteinchromosome CDS1504046 960 + 0.51875
NA ECs5375 50S ribosomal protein L36chromosome CDS344782 141 - 0.432624
NA ECs4550 EspFchromosome CDS4589257 747 - 0.543507
NA ECs0327 50S ribosomal protein L31chromosome CDS344922 264 - 0.462121
NA ECs0939 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1023805 1128 + 0.548759
NA ECs1467 50S ribosomal protein L32chromosome CDS1506462 174 + 0.54023
NA ECs0915 hypothetical proteinchromosome CDS1001998 1326 - 0.526395
NA ECs2032 ribosomal-protein-serine N-acetyltransferasechromosome CDS2016447 297 + 0.40404
NA ECs5225 hypothetical proteinchromosome CDS5328352 396 - 0.472222
NA ECs1605 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1614392 1107 - 0.533875
NA ECs0969 translation initiation factor IF-1chromosome CDS1057302 219 - 0.484018
NA ECs0170 methionine aminopeptidasechromosome CDS192198 795 - 0.498113
NA ECs3026 putative regulator proteinchromosome CDS2958367 951 - 0.539432
NA ECs4175 50S ribosomal protein L14chromosome CDS4182790 372 - 0.510753
NA ECs1330 50S ribosomal protein L31chromosome CDS1396594 264 + 0.42803
NA ECs2423 50S ribosomal protein L20chromosome CDS2399106 357 - 0.484594
NA ECs4526 putative RNA methylasechromosome CDS4568377 690 + 0.553623
NA ECs4907 50S ribosomal protein L1chromosome CDS4987896 705 + 0.51773
NA ECs2586 arginyl-tRNA synthetasechromosome CDS2561992 1734 + 0.530565
NA ECs0457 queuine tRNA-ribosyltransferasechromosome CDS489766 1128 + 0.514184
NA ECs4191 elongation factor EF-2chromosome CDS4191306 2115 - 0.507329
NA ECs4174 50S ribosomal protein L24chromosome CDS4182465 315 - 0.463492
NA ECs5005 hypothetical proteinchromosome CDS5083746 873 + 0.521191
NA ECs4182 50S ribosomal protein L2chromosome CDS4185555 822 - 0.53163
NA ECs4909 50S ribosomal protein L7/L12chromosome CDS4989456 366 + 0.461749
NA ECs4242 Hsp15chromosome CDS4241542 402 + 0.532338
NA ECs1013 asparaginyl-tRNA synthetasechromosome CDS1117056 1401 - 0.526767
NA ECs3075 16S pseudouridylate 516 synthasechromosome CDS3014718 696 - 0.530172
NA ECs5156 hypothetical proteinchromosome CDS5263002 732 + 0.561475
NA ECs4186 30S ribosomal protein S10chromosome CDS4187971 312 - 0.554487
NA ECs1444 RimJchromosome CDS1484706 585 + 0.497436
NA ECs4183 50S ribosomal protein L23chromosome CDS4186394 303 - 0.481848
NA ECs4082 putative sigma-54 modulation proteinchromosome CDS4088526 288 + 0.447917
NA ECs5179 50S ribosomal protein L9chromosome CDS5279834 450 + 0.495556
NA ECs1607 hypothetical proteinchromosome CDS1616023 654 - 0.510703
NA ECs4148 hypothetical proteinchromosome CDS4165855 573 - 0.52356
NA ECs4171 30S ribosomal protein S8chromosome CDS4181165 393 - 0.501272
NA ECs3143 hypothetical proteinchromosome CDS3098552 1983 + 0.515381
NA ECs4048 ribosome-binding factor Achromosome CDS4055274 402 - 0.524876
NA ECs2426 threonyl-tRNA synthetasechromosome CDS2400355 1929 - 0.499741
NA ECs4154 RNA methyltransferasechromosome CDS4170219 1290 + 0.49845
NA ECs5147 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5252977 951 + 0.534175
NA ECs4810 D-tyrosyl-tRNA deacylasechromosome CDS4873586 438 + 0.547945
NA ECs3469 50S ribosomal protein L19chromosome CDS3464303 348 - 0.482759
NA ECs2425 translation initiation factor IF-3chromosome CDS2399809 543 - 0.486188
NA ECs0699 hypothetical proteinchromosome CDS773692 1425 - 0.540351
NA ECs0650 RNase Ichromosome CDS725551 807 - 0.516729
NA ECs4713 ATP-dependent RNA helicasechromosome CDS4757771 1266 - 0.525276
NA ECs0196 prolyl-tRNA synthetasechromosome CDS220388 1719 - 0.545084
NA ECs0978 seryl-tRNA synthetasechromosome CDS1070540 1293 + 0.526682
NA ECs4045 polynucleotide phosphorylasechromosome CDS4051530 2205 - 0.535147
NA ECs1855 hypothetical proteinchromosome CDS1843361 330 + 0.487879
NA ECs4467 selenocysteinyl-tRNA-specific translation factorchromosome CDS4500717 1845 - 0.56206
NA ECs1194 hypothetical proteinchromosome CDS1261810 237 + 0.50211
NA pO157p74 transposasepO157 CDS76062 465 - 0.546237
NA ECs4159 50S ribosomal protein L17chromosome CDS4174628 384 - 0.536458
NA ECs3939 tRNA nucleotidyl transferasechromosome CDS3941419 1239 + 0.563358
NA ECs4193 30S ribosomal protein S12chromosome CDS4194084 375 - 0.533333
NA ECs3479 small membrane protein Achromosome CDS3473803 153 + 0.464052
NA ECs4163 30S ribosomal protein S13chromosome CDS4177127 357 - 0.518207
NA ECs4599 hypothetical proteinchromosome CDS4629083 480 - 0.51875
NA ECs3398 putative ATP synthase beta subunitchromosome CDS3383087 738 - 0.548781
NA ECs3457 suppressor of ftsH mutationchromosome CDS3455150 981 - 0.523955
NA ECs5333 peptide chain release factor 3chromosome CDS5467460 1590 + 0.539623
NA ECs0875 putative ATP-dependent RNA helicasechromosome CDS953239 1368 + 0.562865
NA ECs3948 30S ribosomal protein S21chromosome CDS3950312 216 + 0.518519
NA ECs1037 ribosome modulation factorchromosome CDS1145186 168 + 0.541667
NA ECs3554 alanyl-tRNA synthetasechromosome CDS3543309 2631 - 0.535918
NA ECs4567 hypothetical proteinchromosome CDS4605314 378 - 0.354497
NA ECs4103 30S ribosomal protein S9chromosome CDS4113051 393 - 0.519084
NA ECs0029 isoleucyl-tRNA synthetasechromosome CDS26802 2817 + 0.55733
NA ECs1709 peptidyl-tRNA hydrolasechromosome CDS1703811 585 - 0.502564
NA ECs4863 50S ribosomal subunit protein L31chromosome CDS4928505 213 + 0.492958
NA ECs4512 50S ribosomal protein L28chromosome CDS4555297 237 - 0.531646
NA ECs3077 50S ribosomal protein L25chromosome CDS3017447 285 + 0.498246
NA ECs5136 lysyl-tRNA synthetasechromosome CDS5236923 978 + 0.521472
NA ECs0456 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS488641 1071 + 0.54155
NA ECs5361 hypothetical proteinchromosome CDS5497740 687 + 0.497817
NA ECs3215 putative adenine-specific methylasechromosome CDS3173871 933 - 0.529475
NA ECs1717 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1711976 834 + 0.557554
NA ECs3823 glutathione synthetasechromosome CDS3833377 948 + 0.531646
NA ECs4058 FtsJchromosome CDS4069533 630 - 0.504762
NA ECs4638 50S ribosomal protein L34chromosome CDS4670569 141 + 0.51773
NA ECs4153 methionyl-tRNA formyltransferasechromosome CDS4169226 948 + 0.525316
NA ECs0994 30S ribosomal protein S1chromosome CDS1091638 1674 + 0.511947
NA ECs0148 glutamyl-tRNA synthetasechromosome CDS163508 927 - 0.538296
NA ECs1927 ATP-dependent RNA helicasechromosome CDS1918983 1374 + 0.517467
NA ECs4169 50S ribosomal protein L18chromosome CDS4180256 354 - 0.536723
NA ECs0263 peptide chain release factor 2chromosome CDS291589 501 + 0.552894
NA ECs0932 ribosomal protein S6 modification proteinchromosome CDS1017254 903 + 0.561462
NA ECs5126 hypothetical proteinchromosome CDS5227806 870 - 0.450575
NA ECs2346 tyrosyl-tRNA synthetasechromosome CDS2315675 1275 - 0.518431
NA ECs0147 poly(A) polymerase Ichromosome CDS162051 1365 - 0.561172
NA ECs3472 30S ribosomal protein S16chromosome CDS3466057 249 - 0.514056
NA ECs4065 50S ribosomal protein L21chromosome CDS4075492 312 - 0.483974
NA ECs5220 hypothetical proteinchromosome CDS5326065 426 - 0.511737
NA ECs3460 putative yhbH sigma 54 modulatorchromosome CDS3457273 342 + 0.461988
NA ECs0710 glutaminyl-tRNA synthetasechromosome CDS786116 1665 + 0.524324
NA ECs4167 50S ribosomal protein L30chromosome CDS4179555 180 - 0.5
NA ECs3763 peptide chain release factor 2chromosome CDS3773333 1098 - 0.535519
NA ECs5289 hypothetical proteinchromosome CDS5415707 390 + 0.484615
NA ECs4166 50S ribosomal protein L15chromosome CDS4179117 435 - 0.537931
NA ECs4484 hypothetical proteinchromosome CDS4528047 474 + 0.546413
NA ECs3447 hypothetical proteinchromosome CDS3437689 1038 - 0.56262
NA ECs2624 hypothetical proteinchromosome CDS2596467 279 + 0.426523
NA ECs1256 hypothetical proteinchromosome CDS1312593 387 - 0.537468
NA ECs4161 30S ribosomal protein S4chromosome CDS4176067 621 - 0.507246
NA ECs1462 RNase Echromosome CDS1500288 3186 - 0.558067
NA ECs1839 hypothetical proteinchromosome CDS1825118 621 + 0.491143
NA ECs4162 30S ribosomal protein S11chromosome CDS4176721 390 - 0.517949
NA ECs5235 valyl-tRNA synthetasechromosome CDS5336379 2856 - 0.551471
NA ECs4064 50S ribosomal protein L27chromosome CDS4075214 258 - 0.5
NA ECs1841 hypothetical proteinchromosome CDS1827562 873 + 0.54181
NA ECs2513 RNase Dchromosome CDS2488693 1128 - 0.541667
NA ECs4164 50S ribosomal protein L36chromosome CDS4177630 117 - 0.478632
NA ECs4104 50S ribosomal protein L13chromosome CDS4113459 429 - 0.505827
NA ECs4172 30S ribosomal protein S14chromosome CDS4181591 306 - 0.526144
NA ECs0151 hypothetical proteinchromosome CDS165823 531 - 0.557439
NA ECs4184 50S ribosomal protein L4chromosome CDS4186693 606 - 0.529703
NA ECs4132 putative dehydrogenasechromosome CDS4145240 966 + 0.522774
NA ECs3833 periplasmic L-asparaginase IIchromosome CDS3841276 1047 - 0.528176
NA ECs1241 hypothetical proteinchromosome CDS1294546 1266 + 0.49684
NA ECs2518 hypothetical proteinchromosome CDS2495148 393 + 0.508906
NA ECs2576 aspartyl-tRNA synthetasechromosome CDS2550680 1773 - 0.540891
NA ECs4192 30S ribosomal protein S7chromosome CDS4193517 471 - 0.496815
NA ECs4043 inducible ATP-independent RNA helicasechromosome CDS4048468 1890 - 0.551852
NA ECs3651 hypothetical proteinchromosome CDS3645402 783 - 0.537676
NA ECs4173 50S ribosomal protein L5chromosome CDS4181911 540 - 0.498148
NA ECs0193 hypothetical proteinchromosome CDS218177 411 + 0.545012
NA ECs3063 elongation factor Pchromosome CDS3000379 573 + 0.500873
NA ECs4119 ribonuclease Gchromosome CDS4131286 1470 - 0.523129
NA ECs4896 tRNA (uracil-5-)-methyltransferasechromosome CDS4971435 1101 - 0.511353
NA ECs1716 peptide chain release factor 1chromosome CDS1710894 1083 + 0.529086
NA ECs3993 hypothetical proteinchromosome CDS3999350 390 - 0.517949
NA ECs4131 ribosomal protein L11 methyltransferasechromosome CDS4144030 882 + 0.546485
NA ECs4046 30S ribosomal protein S15chromosome CDS4053912 270 - 0.522222
NA ECs4176 30S ribosomal protein S17chromosome CDS4183326 255 - 0.47451
NA ECs1708 putative GTP-binding proteinchromosome CDS1702603 1092 - 0.510989
NA ECs4511 50S ribosomal protein L33chromosome CDS4555109 168 - 0.404762
NA ECs0171 30S ribosomal protein S2chromosome CDS193360 726 + 0.513774
ansA ECs2474 cytoplasmic asparaginase Ichromosome CDS2451163 1017 + 0.508358
cysS ECs0588 cysteinyl-tRNA synthetasechromosome CDS647063 1386 + 0.546898
def ECs4152 peptide deformylasechromosome CDS4168702 510 + 0.466667
frr ECs0174 ribosome releasing factorchromosome CDS196216 558 + 0.508961
gltX ECs3278 glutamyl-tRNA synthetasechromosome CDS3247787 1416 - 0.530367
glyQ ECs4443 glycyl-tRNA synthetase alpha subunitchromosome CDS4470577 912 - 0.555921
glyS ECs4442 glycyl-tRNA synthetase beta subunitchromosome CDS4468498 2070 - 0.554106
hisS ECs3376 histidyl-tRNA synthetasechromosome CDS3355442 1275 - 0.546667
infB ECs4049 translation initiation factor IF-2chromosome CDS4055840 2673 - 0.534979
ksgA ECs0056 dimethyladenosine transferasechromosome CDS56584 822 - 0.53163
leuS ECs0680 leucyl-tRNA synthetasechromosome CDS753559 2583 - 0.531165
lysS ECs5111 lysyl-tRNA synthetasechromosome CDS5207650 1518 - 0.47892
lysS ECs3762 lysyl-tRNA synthetasechromosome CDS3771806 1518 - 0.523715
pheS ECs2421 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2397673 984 - 0.54065
rnpA ECs4639 ribonuclease Pchromosome CDS4670726 360 + 0.555556
rph ECs4518 ribonuclease PHchromosome CDS4559693 717 - 0.570432
rplJ ECs4908 50S ribosomal protein L10chromosome CDS4988892 498 + 0.524096
rplK ECs4906 50S ribosomal protein L11chromosome CDS4987464 429 + 0.519814
rplV ECs4180 50S ribosomal protein L22chromosome CDS4184913 333 - 0.498498
rpmC ECs4177 50S ribosomal protein L29chromosome CDS4183580 192 - 0.541667
rpmI ECs2424 50S ribosomal protein L35chromosome CDS2399515 213 - 0.483568
rpsC ECs4179 30S ribosomal protein S3chromosome CDS4184194 702 - 0.509971
rpsE ECs4168 30S ribosomal protein S5chromosome CDS4179738 504 - 0.498016
rpsF ECs5176 30S ribosomal protein S6chromosome CDS5278844 396 + 0.527778
rpsR ECs5178 30S ribosomal protein S18chromosome CDS5279565 228 + 0.526316
rpsS ECs4181 30S ribosomal protein S19chromosome CDS4185260 279 - 0.491039
rpsT ECs0026 30S ribosomal protein S20chromosome CDS25220 264 - 0.465909
rsmC ECs5329 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS5464715 1032 - 0.556202
rumA ECs3645 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3636098 1302 - 0.513057
trmD ECs3470 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3464692 768 - 0.53125
truA ECs3202 tRNA pseudouridine synthase Achromosome CDS3161177 813 - 0.557196
truB ECs4047 tRNA pseudouridine synthase Bchromosome CDS4054330 945 - 0.529101
tsf ECs0172 elongation factor Tschromosome CDS194343 852 + 0.497653
tuf ECs4903 elongation factor Tuchromosome CDS4984961 1185 + 0.533333
tuf ECs4190 elongation factor Tuchromosome CDS4190051 1185 - 0.531646
 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2212 putative amidasechromosome CDS2126856 1488 - 0.563844
NA UTI89_C1262 probable ATPase YcfBchromosome CDS1237647 1152 - 0.536458
NA UTI89_C2004 hypothetical proteinchromosome CDS1920008 393 + 0.51145
NA UTI89_C2931 putative YhbH sigma 54 modulatorchromosome CDS2881354 342 + 0.461988
NA UTI89_C2898 ATP-dependent RNA helicasechromosome CDS2854638 1335 + 0.544569
NA UTI89_C0313 50S ribosomal subunit protein Xchromosome CDS322966 144 - 0.430556
NA UTI89_C1911 protein chain initiation factor IF-3chromosome CDS1835682 435 - 0.478161
NA UTI89_C1255 hypothetical proteinchromosome CDS1230553 252 - 0.412698
NA UTI89_C4396 hypothetical proteinchromosome CDS4280678 258 - 0.395349
NA UTI89_C3048 hypothetical proteinchromosome CDS2971854 1113 + 0.530099
NA UTI89_C4099 glycine tRNA synthetase beta subunitchromosome CDS3988180 2070 - 0.556039
NA UTI89_C2192 hypothetical proteinchromosome CDS2103338 477 + 0.467505
NA UTI89_C0659 hypothetical proteinchromosome CDS668315 1425 - 0.548772
NA UTI89_P089 hypothetical proteinpUTI89 CDS68562 564 + 0.579787
NA UTI89_C5084 peptide chain release factor RF-3chromosome CDS4987089 102 + 0.421569
alaS UTI89_C3058 alanyl-tRNA synthetasechromosome CDS2977773 2631 - 0.538579
ansA UTI89_C1963 L-asparaginase Ichromosome CDS1883107 1017 + 0.500492
ansB UTI89_C3346 L-asparaginase II precursorchromosome CDS3277238 1047 - 0.51958
argS UTI89_C2080 arginine tRNA synthetasechromosome CDS1986696 1734 + 0.530565
asnS UTI89_C1002 asparagine tRNA synthetasechromosome CDS991917 1401 - 0.524625
aspS UTI89_C2070 aspartyl-tRNA synthetasechromosome CDS1975384 1773 - 0.538635
cca UTI89_C3492 tRNA nucleotidyl transferasechromosome CDS3429693 1239 + 0.566586
cysS UTI89_C0555 cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)chromosome CDS565629 1386 + 0.54329
dbpA UTI89_C1614 ATP-independent RNA helicase DbpAchromosome CDS1526667 1374 + 0.521106
def UTI89_C3731 peptide deformylasechromosome CDS3651491 510 + 0.466667
efp UTI89_C4745 elongation factor P (EF-P)chromosome CDS4647498 567 + 0.497355
fmt UTI89_C3732 methionyl-tRNA formyltransferasechromosome CDS3652015 948 + 0.514768
ftsJ UTI89_C3611 cell division proteinchromosome CDS3546865 630 - 0.504762
fusA UTI89_C3842 translation elongation factor EF-G GTP-binding protein chainchromosome CDS3729406 2115 - 0.507801
glnS UTI89_C0684 glutaminyl-tRNA synthetasechromosome CDS689817 1665 + 0.527327
gltX UTI89_C2731 glutamyl-tRNA synthetasechromosome CDS2679177 1416 - 0.52613
glyQ UTI89_C4100 glycine tRNA synthetase, alpha subunitchromosome CDS3990259 912 - 0.560307
gshB UTI89_C3336 glutathione synthetasechromosome CDS3269530 951 + 0.526814
hemK UTI89_C1406 protein methyltransferase HemKchromosome CDS1341411 834 + 0.555156
hisS UTI89_C2835 histidine tRNA synthetasechromosome CDS2786813 1275 - 0.545882
hlsR UTI89_C3898 ribosome-associated heat shock protein 15chromosome CDS3782016 402 + 0.527363
ileS UTI89_C0028 isoleucyl-tRNA synthetasechromosome CDS23918 2817 + 0.544551
infA UTI89_C0899 protein chain initiation factor IF-1chromosome CDS896607 219 - 0.484018
infB UTI89_C3598 translation initiation factor IF2-alphachromosome CDS3533177 2673 - 0.530864
ksgA UTI89_C0058 dimethyladenosine transferasechromosome CDS54807 822 - 0.537713
lasT UTI89_C5176 hypothetical tRNA/rRNA methyltransferase LasTchromosome CDS5065010 708 + 0.481638
leuS UTI89_C0645 leucyl-tRNA synthetasechromosome CDS654052 2724 - 0.529001
ligT UTI89_C0161 putative 2'-5' RNA ligasechromosome CDS167547 540 - 0.562963
lysS UTI89_C3275 lysine tRNA synthetasechromosome CDS3212323 1518 - 0.525692
lysU UTI89_C4726 lysyl-tRNA synthetase, heat induciblechromosome CDS4625311 1545 - 0.474434
map UTI89_C0182 methionine aminopeptidasechromosome CDS193778 795 - 0.508176
miaA UTI89_C4771 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4671064 951 + 0.528917
pcnB UTI89_C0157 poly(A) polymerasechromosome CDS163775 1419 - 0.55814
pheS UTI89_C1907 phenylalanyl-tRNA synthetase alpha chainchromosome CDS1833545 996 - 0.544177
pheT UTI89_C1906 phenylalanyl-tRNA synthetase beta chainchromosome CDS1831143 2388 - 0.54397
pnp UTI89_C3594 polyribonucleotide nucleotidyltransferasechromosome CDS3528868 2223 - 0.530364
prfA UTI89_C1405 peptide chain release factor RF-1chromosome CDS1340329 1083 + 0.525392
prfC UTI89_C5144 peptide chain release factor RF-3chromosome CDS5033363 1587 + 0.542533
prfH UTI89_C0276 peptide chain release factor-like proteinchromosome CDS286486 615 + 0.541463
prmA UTI89_C3701 ribosomal protein L11 methyltransferasechromosome CDS3627026 882 + 0.545351
prmB UTI89_C2615 protein-(glutamine-N5) methyltransferasechromosome CDS2579921 1266 - 0.521327
proS UTI89_C0210 prolyl-tRNA synthetasechromosome CDS221811 1773 - 0.539763
pth UTI89_C1398 peptidyl-tRNA hydrolasechromosome CDS1333246 585 - 0.500855
queA UTI89_C0427 probable S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS439395 1071 + 0.53408
rbfA UTI89_C3597 ribosome-binding factor Achromosome CDS3532612 420 - 0.519048
rhlB UTI89_C4334 putative ATP-dependent RNA helicasechromosome CDS4224359 1266 - 0.521327
rhlE UTI89_C0798 putative ATP-dependent RNA helicase RhlEchromosome CDS793816 1362 + 0.563142
rimJ UTI89_C1191 ribosomal-protein-alanine acetyltransferasechromosome CDS1170530 585 + 0.494017
rimK UTI89_C0855 ribosomal protein S6 modification proteinchromosome CDS853162 903 + 0.55814
rimL UTI89_C1647 acetyl transferasechromosome CDS1572193 555 + 0.432432
rimM UTI89_C2941 16S rRNA processing protein RimMchromosome CDS2889570 558 - 0.489247
rluA UTI89_C0063 ribosomal large subunit pseudouridine synthase Achromosome CDS61527 660 - 0.543939
rluD UTI89_C2927 ribosomal large subunit pseudouridine synthase Dchromosome CDS2879232 981 - 0.528033
rluE UTI89_C1264 23S rRNA pseudouridine synthasechromosome CDS1239278 654 - 0.521407
rmf UTI89_C1018 ribosome modulation factorchromosome CDS1013035 168 + 0.541667
rnd UTI89_C1998 ribonuclease Dchromosome CDS1913553 1128 - 0.539894
rne UTI89_C1209 RNase Echromosome CDS1186146 3186 - 0.557125
rng UTI89_C3677 ribonuclease Gchromosome CDS3605711 1488 - 0.520161
rnpA UTI89_C4255 ribonuclease P protein componentchromosome CDS4146061 360 + 0.558333
rph UTI89_C4187 ribonuclease PHchromosome CDS4074362 741 - 0.558704
rplA UTI89_C3836 50S ribosomal subunit protein L1chromosome CDS3725696 705 - 0.514894
rplB UTI89_C3770 50S ribosomal subunit protein L2chromosome CDS3668353 822 - 0.526764
rplC UTI89_C3775 50S ribosomal subunit protein L3chromosome CDS3670107 630 - 0.514286
rplD UTI89_C3773 50S ribosomal subunit protein L4chromosome CDS3669491 606 - 0.531353
rplE UTI89_C3757 50S ribosomal subunit protein L5chromosome CDS3664709 540 - 0.498148
rplF UTI89_C3753 50S ribosomal subunit protein L6chromosome CDS3663417 534 - 0.520599
rplI UTI89_C4803 50S ribosomal subunit protein L9chromosome CDS4697831 450 + 0.497778
rplJ UTI89_C3835 50S ribosomal subunit protein L10chromosome CDS3724907 498 - 0.522088
rplK UTI89_C3838 50S ribosomal subunit protein L11chromosome CDS3726404 429 - 0.517483
rplL UTI89_C3834 50S ribosomal subunit protein L7/L12chromosome CDS3724475 366 - 0.461749
rplM UTI89_C3661 50S ribosomal subunit protein L13chromosome CDS3587889 504 - 0.488095
rplN UTI89_C3760 50S ribosomal subunit protein L14chromosome CDS3665588 372 - 0.510753
rplO UTI89_C3747 50S ribosomal subunit protein L15chromosome CDS3661915 435 - 0.535632
rplP UTI89_C3764 50S ribosomal subunit protein L16chromosome CDS3666569 411 - 0.515815
rplQ UTI89_C3739 50S ribosomal subunit protein L17chromosome CDS3657426 384 - 0.533854
rplR UTI89_C3751 50S ribosomal subunit protein L18chromosome CDS3663054 354 - 0.536723
rplS UTI89_C2939 50S ribosomal subunit protein L19chromosome CDS2888383 348 - 0.482759
rplT UTI89_C1909 50S ribosomal subunit protein L20chromosome CDS1834979 357 - 0.487395
rplU UTI89_C3620 50S ribosomal subunit protein L21chromosome CDS3552813 312 - 0.480769
rplV UTI89_C3767 50S ribosomal subunit protein L22chromosome CDS3667711 333 - 0.498498
rplW UTI89_C3771 50S ribosomal subunit protein L23chromosome CDS3669192 303 - 0.481848
rplX UTI89_C3758 50S ribosomal protein L24chromosome CDS3665263 315 - 0.457143
rplY UTI89_C2462 50S ribosomal protein L25chromosome CDS2422471 381 + 0.485564
rpmA UTI89_C3618 50S ribosomal subunit protein L27chromosome CDS3552535 258 - 0.496124
rpmB UTI89_C4181 50S ribosomal subunit protein L28chromosome CDS4069966 237 - 0.527426
rpmC UTI89_C3762 50S ribosomal subunit protein L29chromosome CDS3666378 192 - 0.541667
rpmD UTI89_C3748 50S ribosomal subunit protein L30chromosome CDS3662353 180 - 0.5
rpmF UTI89_C1214 50S ribosomal subunit protein L32chromosome CDS1192331 174 + 0.54023
rpmG UTI89_C4180 50S ribosomal subunit protein L33chromosome CDS4069778 168 - 0.404762
rpmH UTI89_C4254 50S ribosomal protein L34chromosome CDS4145904 141 + 0.51773
rpmI UTI89_C1910 50S ribosomal subunit protein Achromosome CDS1835388 198 - 0.5
rpmJ UTI89_C3745 50S ribosomal subunit protein L36chromosome CDS3660428 117 - 0.478632
rpsA UTI89_C0982 30S ribosomal subunit protein S1chromosome CDS966502 1674 + 0.512545
rpsB UTI89_C0183 30S ribosomal protein S2chromosome CDS194742 924 + 0.505411
rpsC UTI89_C3765 30S ribosomal subunit protein S3chromosome CDS3666992 702 - 0.509971
rpsD UTI89_C3741 30S ribosomal subunit protein S4chromosome CDS3658865 621 - 0.507246
rpsE UTI89_C3750 30S ribosomal subunit protein S5chromosome CDS3662536 504 - 0.498016
rpsF UTI89_C4800 30S ribosomal protein S6chromosome CDS4696841 396 + 0.527778
rpsG UTI89_C3843 30S ribosomal subunit protein S7chromosome CDS3731617 471 - 0.496815
rpsH UTI89_C3755 30S ribosomal subunit protein S8, and regulatorchromosome CDS3663963 393 - 0.501272
rpsI UTI89_C3660 30S ribosomal subunit protein S9chromosome CDS3587481 393 - 0.524173
rpsJ UTI89_C3776 30S ribosomal subunit protein S10chromosome CDS3670769 312 - 0.551282
rpsK UTI89_C3742 30S ribosomal subunit protein S11chromosome CDS3659519 390 - 0.515385
rpsL UTI89_C3844 30S ribosomal subunit protein S12chromosome CDS3732184 435 - 0.508046
rpsM UTI89_C3744 30S ribosomal subunit protein S13chromosome CDS3659925 357 - 0.518207
rpsN UTI89_C3756 30S ribosomal subunit protein S14chromosome CDS3664389 306 - 0.526144
rpsO UTI89_C3595 30S ribosomal subunit protein S15chromosome CDS3531250 270 - 0.518519
rpsP UTI89_C2942 30S ribosomal protein S16chromosome CDS2890137 309 - 0.511327
rpsQ UTI89_C3761 30S ribosomal subunit protein S17chromosome CDS3666124 255 - 0.47451
rpsR UTI89_C4802 30S ribosomal subunit protein S18chromosome CDS4697562 228 + 0.526316
rpsS UTI89_C3768 30S ribosomal subunit protein S19chromosome CDS3668058 279 - 0.491039
rpsT UTI89_C0025 30S ribosomal subunit protein S20chromosome CDS22342 264 - 0.462121
rpsU UTI89_C3502 30S ribosomal subunit protein S21chromosome CDS3438591 216 + 0.518519
rrf UTI89_C0187 ribosome recycling factorchromosome CDS197673 558 + 0.505376
rsuA UTI89_C2460 ribosomal small subunit pseudouridine synthase Achromosome CDS2419837 792 - 0.522727
selB UTI89_C4132 selenocysteine-specific elongation factorchromosome CDS4021936 1845 - 0.56748
serS UTI89_C0908 seryl-tRNA synthetasechromosome CDS909863 1293 + 0.528229
smpA UTI89_C2951 small protein A precursorchromosome CDS2897693 342 + 0.497076
speG UTI89_C1771 spermidine N(1)-acetyltransferasechromosome CDS1696687 561 + 0.467023
spoU UTI89_C4196 tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS4083047 690 + 0.556522
sun UTI89_C3733 SUN proteinchromosome CDS3653014 1290 + 0.496899
tgt UTI89_C0428 tRNA-guanine transglycosylasechromosome CDS440520 1128 + 0.513298
thrS UTI89_C1912 threonyl-tRNA synthetasechromosome CDS1836228 1929 - 0.493002
trmD UTI89_C2940 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferasechromosome CDS2888772 768 - 0.53125
trpS UTI89_C3882 tryptophan tRNA synthetasechromosome CDS3765302 1005 - 0.524378
truA UTI89_C2603 tRNA pseudouridylate synthase Ichromosome CDS2567237 813 - 0.555966
truB UTI89_C3596 tRNA pseudouridine 5S synthasechromosome CDS3531668 945 - 0.526984
truC UTI89_C3161 hypothetical proteinchromosome CDS3077457 783 - 0.542784
tsf UTI89_C0185 protein chain elongation factor EF-Tschromosome CDS195800 852 + 0.496479
tufA UTI89_C3841 translation elongation factor EF-Tuchromosome CDS3728151 1230 - 0.531707
tufB UTI89_C3795 protein chain elongation factor EF-Tu (duplicate of tufB)chromosome CDS3687982 1185 - 0.535865
tyrS UTI89_C1828 tyrosyl-tRNA synthetasechromosome CDS1756109 1287 - 0.519037
valS UTI89_C4864 valyl-tRNA synthetasechromosome CDS4762588 2856 - 0.546219
yadB UTI89_C0158 conserved hypothetical protein YadBchromosome CDS165232 927 - 0.537217
yaeJ UTI89_C0207 hypothetical protein YaeJchromosome CDS219632 423 + 0.550827
ybjF UTI89_C0862 hypothetical RNA methyltransferase YbjFchromosome CDS859712 1128 + 0.54078
ycdK UTI89_C1073 hypothetical proteinchromosome CDS1058705 387 - 0.537468
yceC UTI89_C1211 hypothetical proteinchromosome CDS1189904 960 + 0.517708
ychF UTI89_C1397 probable GTP-binding protein YchFchromosome CDS1332038 1092 - 0.513736
yciH UTI89_C1553 putative translation initiation factorchromosome CDS1463588 327 + 0.507645
yciL UTI89_C1537 hypothetical protein YciLchromosome CDS1447799 876 + 0.534247
yciO UTI89_C1535 hypothetical proteinchromosome CDS1445007 657 + 0.496195
yebU UTI89_C2036 hypothetical protein YebUchromosome CDS1946907 1446 + 0.524896
yeiP UTI89_C2448 putative elongation factor YeiPchromosome CDS2405243 828 + 0.503623
yfhC UTI89_C2879 putative deaminasechromosome CDS2839101 537 - 0.528864
yfhQ UTI89_C2854 putative ATP synthase beta subunitchromosome CDS2809463 741 - 0.547908
yfiF UTI89_C2903 hypothetical tRNA/rRNA methyltransferase YfiFchromosome CDS2859057 1113 - 0.565139
ygcA UTI89_C3155 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS3068156 1302 - 0.508449
ygjO UTI89_C3522 putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3461345 1137 - 0.539138
yhaR UTI89_C3548 TdcF proteinchromosome CDS3485627 453 - 0.520971
yhbH UTI89_C3639 probable sigma-54 modulation proteinchromosome CDS3565851 288 + 0.451389
yhbY UTI89_C3613 hypothetical proteinchromosome CDS3547620 294 + 0.486395
yhdG UTI89_C3702 putative dehydrogenasechromosome CDS3628236 966 + 0.519669
yibK UTI89_C4147 hypothetical proteinchromosome CDS4042928 474 + 0.550633
yicN UTI89_C4219 hypothetical proteinchromosome CDS4107969 480 - 0.527083
yihZ UTI89_C4471 hypothetical proteinchromosome CDS4356452 438 + 0.547945
yjbC UTI89_C4590 putative 23S rRNA pseudouridine synthase subunit yjbCchromosome CDS4483032 873 + 0.505155
yjbN UTI89_C4617 hypothetical protein YjbNchromosome CDS4509078 996 + 0.536145
yjeA UTI89_C4755 putative lysyl-tRNA synthetasechromosome CDS4654442 978 + 0.525562
yjeJ UTI89_C4743 hypothetical protein YjeJchromosome CDS4645324 870 - 0.452874
yjfH UTI89_C4780 hypothetical tRNA/rRNA methyltransferase YjfHchromosome CDS4680999 732 + 0.554645
yjgF UTI89_C4848 hypothetical proteinchromosome CDS4750373 459 - 0.505447
yjjT UTI89_C5079 ribosomal RNA small subunit methyltransferase Cchromosome CDS4984371 1032 - 0.559109
ykgM UTI89_C0314 50S ribosomal protein L31 type B-1chromosome CDS323106 267 - 0.460674
yliG UTI89_C0838 hypothetical protein YliGchromosome CDS837924 1326 - 0.522624
yohI UTI89_C2413 hypothetical protein YohIchromosome CDS2370645 1017 - 0.52999
yrdC UTI89_C3727 protein YrdCchromosome CDS3648644 618 - 0.522654
 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS alanyl-tRNA synthetasechromosome CDS2818037 2631 - 0.536298
ansA cytoplasmic L-asparaginase Ichromosome CDS1852574 1017 + 0.511308
ansB periplasmic L-asparaginase IIchromosome CDS3098338 1047 - 0.526266
argS arginyl-tRNA synthetasechromosome CDS1961776 1734 + 0.532872
asnS asparaginyl tRNA synthetasechromosome CDS988007 1401 - 0.523911
aspS aspartyl-tRNA synthetasechromosome CDS1950464 1773 - 0.537507
cca fused tRNA nucleotidyl transferase and 2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatasechromosome CDS3200547 1239 + 0.56255
cysS cysteinyl-tRNA synthetasechromosome CDS553834 1386 + 0.544733
dbpA ATP-dependent RNA helicase specific for 23S rRNAchromosome CDS1411225 1374 + 0.519651
deaD ATP-dependent RNA helicasechromosome CDS3305826 1890 - 0.555556
def peptide deformylasechromosome CDS4206217 510 - 0.462745
dtd D-Tyr-tRNA(Tyr) deacylasechromosome CDS3559229 438 - 0.550228
dusB tRNA-dihydrouridine synthase Bchromosome CDS3410135 966 + 0.522774
dusC tRNA-dihydrouridine synthase Cchromosome CDS2232772 948 - 0.542194
efp Elongation factor EF-Pchromosome CDS4380379 567 + 0.493827
flxA hypothetical proteinchromosome CDS1648119 333 + 0.429429
fmt 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferasechromosome CDS4205255 948 - 0.528481
frr ribosome recycling factorchromosome CDS192872 558 + 0.508961
fusA protein chain elongation factor EF-Gchromosome CDS4166902 2115 + 0.508274
glnS glutamyl-tRNA synthetasechromosome CDS706515 1665 + 0.524925
gltX glutamyl-tRNA synthetasechromosome CDS2524703 1416 - 0.525424
glyQ glycine tRNA synthetase, alpha subunitchromosome CDS3915097 912 + 0.561404
glyS glycine tRNA synthetase, beta subunitchromosome CDS3916018 2070 + 0.554106
gshB glutathione synthetasechromosome CDS3090534 951 + 0.534175
hisS histidyl tRNA synthetasechromosome CDS2637957 1275 - 0.547451
hslR ribosome-associated heat shock protein Hsp15chromosome CDS4110667 402 - 0.534826
ileS isoleucyl-tRNA synthetasechromosome CDS22391 2817 + 0.557685
infA translation initiation factor IF-1chromosome CDS926647 219 - 0.484018
infB fused protein chain initiation factor 2, IF2chromosome CDS3313197 2673 - 0.534231
infC protein chain initiation factor IF-3chromosome CDS1801810 543 - 0.486188
kptA 2'-phosphotransferasechromosome CDS4565610 555 + 0.508108
ksgA S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferasechromosome CDS51609 822 - 0.530414
leuS leucyl-tRNA synthetasechromosome CDS672623 2583 - 0.533488
ligT 2'-5' RNA ligasechromosome CDS161501 531 - 0.559322
lysS lysine tRNA synthetase, constitutivechromosome CDS3032313 1518 - 0.530962
lysU lysine tRNA synthetase, induciblechromosome CDS4357878 1518 - 0.474308
map methionine aminopeptidasechromosome CDS188712 795 - 0.504403
miaA delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4403932 951 + 0.534175
miaB isopentenyl-adenosine A37 tRNA methylthiolasechromosome CDS693953 1425 - 0.541754
pcnB poly(A) polymerase Ichromosome CDS157729 1398 - 0.558655
pheS phenylalanine tRNA synthetase, alpha subunitchromosome CDS1799673 984 - 0.538618
pnp polynucleotide phosphorylase/polyadenylasechromosome CDS3308888 2205 - 0.536961
poxA predicted lysyl-tRNA synthetasechromosome CDS4387323 978 + 0.526585
prfA peptide chain release factor RF-1chromosome CDS1266589 1083 + 0.530009
prfB peptide chain release factor RF-2chromosome CDS3033840 1098 - 0.535519
prfC peptide chain release factor RF-3chromosome CDS4614094 1590 + 0.540252
prfH predicted peptide chain release factorchromosome CDS253702 501 + 0.542914
prmA methylase for 50S ribosomal subunit protein L11chromosome CDS3408925 882 + 0.543084
prmB N5-glutamine methyltransferasechromosome CDS2452954 933 - 0.525188
prmC N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2chromosome CDS1267671 834 + 0.551559
proS prolyl-tRNA synthetasechromosome CDS217057 1719 - 0.545084
pth peptidyl-tRNA hydrolasechromosome CDS1259506 585 - 0.497436
queA S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS424235 1071 + 0.54155
rbfA 30s ribosome binding factorchromosome CDS3312632 402 - 0.529851
relE toxin of the RelE-RelB toxin-antitoxin systemchromosome CDS1647060 288 - 0.46875
rhlB ATP-dependent RNA helicasechromosome CDS3671051 1266 + 0.525276
rhlE RNA helicasechromosome CDS831294 1365 + 0.567033
rimJ ribosomal-protein-S5-alanine N-acetyltransferasechromosome CDS1127139 585 + 0.494017
rimK ribosomal protein S6 modification proteinchromosome CDS892389 903 + 0.562569
rimL ribosomal-protein-L7/L12-serine acetyltransferasechromosome CDS1500652 540 + 0.433333
rimM 16S rRNA processing proteinchromosome CDS2744026 549 - 0.489982
rlmB 23S rRNA (Gm2251)-methyltransferasechromosome CDS4413955 732 + 0.562842
rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)chromosome CDS59687 660 - 0.539394
rluB 23S rRNA pseudouridylate synthasechromosome CDS1328566 876 + 0.537671
rluC 23S rRNA pseudouridylate synthasechromosome CDS1146517 960 + 0.514583
rluD 23S rRNA pseudouridine synthasechromosome CDS2733687 981 - 0.528033
rmf ribosome modulation factorchromosome CDS1016137 168 + 0.541667
rna ribonuclease Ichromosome CDS643420 807 - 0.511772
rnd ribonuclease Dchromosome CDS1888578 1128 - 0.54078
rne fused ribonucleaseE endoribonuclease and scaffold for formation of degradosomechromosome CDS1142759 3186 - 0.556497
rng ribonuclease Gchromosome CDS3396181 1470 - 0.521088
rnpA protein C5 component of RNase Pchromosome CDS3755563 360 - 0.558333
rph chromosome pseudo3823866 687 + 0.561863
rph chromosome pseudo3823866 687 + 0.561863
rplA 50S ribosomal subunit protein L1chromosome CDS3457098 705 - 0.516312
rplB 50S ribosomal subunit protein L2chromosome CDS4189052 822 + 0.526764
rplC 50S ribosomal subunit protein L3chromosome CDS4187490 630 + 0.514286
rplD 50S ribosomal subunit protein L4chromosome CDS4188130 606 + 0.529703
rplE 50S ribosomal subunit protein L5chromosome CDS4192978 540 + 0.498148
rplF 50S ribosomal subunit protein L6chromosome CDS4194276 534 + 0.520599
rplI 50S ribosomal subunit protein L9chromosome CDS4430788 450 + 0.497778
rplJ 50S ribosomal subunit protein L10chromosome CDS3456188 498 - 0.524096
rplK 50S ribosomal subunit protein L11chromosome CDS3457806 429 - 0.522144
rplL 50S ribosomal subunit protein L7/L12chromosome CDS3455756 366 - 0.461749
rplM 50S ribosomal subunit protein L13chromosome CDS3378078 429 - 0.505827
rplN 50S ribosomal subunit protein L14chromosome CDS4192267 372 + 0.510753
rplO 50S ribosomal subunit protein L15chromosome CDS4195877 435 + 0.535632
rplP 50S ribosomal subunit protein L16chromosome CDS4191247 411 + 0.518248
rplQ 50S ribosomal subunit protein L17chromosome CDS4200417 384 + 0.536458
rplR 50S ribosomal subunit protein L18chromosome CDS4194819 354 + 0.536723
rplS 50S ribosomal subunit protein L19chromosome CDS2742839 348 - 0.482759
rplT 50S ribosomal subunit protein L20chromosome CDS1801107 357 - 0.481793
rplU 50S ribosomal subunit protein L21chromosome CDS3332995 312 - 0.483974
rplV 50S ribosomal subunit protein L22chromosome CDS4190183 333 + 0.498498
rplW 50S ribosomal subunit protein L23chromosome CDS4188732 303 + 0.481848
rplX 50S ribosomal subunit protein L24chromosome CDS4192649 315 + 0.460317
rplY 50S ribosomal subunit protein L25chromosome CDS2285851 285 + 0.505263
rpmA 50S ribosomal subunit protein L27chromosome CDS3332717 258 - 0.5
rpmB 50S ribosomal subunit protein L28chromosome CDS3828741 237 + 0.531646
rpmC 50S ribosomal subunit protein L29chromosome CDS4191657 192 + 0.541667
rpmD 50S ribosomal subunit protein L30chromosome CDS4195694 180 + 0.5
rpmE 50S ribosomal subunit protein L31chromosome CDS3509456 213 - 0.492958
rpmF 50S ribosomal subunit protein L32chromosome CDS1148944 174 + 0.54023
rpmG 50S ribosomal subunit protein L33chromosome CDS3828998 168 + 0.404762
rpmH 50S ribosomal subunit protein L34chromosome CDS3755939 141 - 0.51773
rpmI 50S ribosomal subunit protein L35chromosome CDS1801516 198 - 0.5
rpmJ 50S ribosomal subunit protein L36chromosome CDS4197682 117 + 0.478632
rpsA 30S ribosomal subunit protein S1chromosome CDS962417 1674 + 0.511947
rpsB 30S ribosomal subunit protein S2chromosome CDS189874 726 + 0.513774
rpsC 30S ribosomal subunit protein S3chromosome CDS4190533 702 + 0.509971
rpsD 30S ribosomal subunit protein S4chromosome CDS4198741 621 + 0.507246
rpsE 30S ribosomal subunit protein S5chromosome CDS4195187 504 + 0.501984
rpsF 30S ribosomal subunit protein S6chromosome CDS4429798 396 + 0.525253
rpsG 30S ribosomal subunit protein S7chromosome CDS4166335 540 + 0.501852
rpsH 30S ribosomal subunit protein S8chromosome CDS4193871 393 + 0.501272
rpsI 30S ribosomal subunit protein S9chromosome CDS3377670 393 - 0.524173
rpsJ 30S ribosomal subunit protein S10chromosome CDS4187146 312 + 0.554487
rpsK 30S ribosomal subunit protein S11chromosome CDS4198318 390 + 0.515385
rpsL 30S ribosomal subunit protein S12chromosome CDS4165864 375 + 0.533333
rpsM 30S ribosomal subunit protein S13chromosome CDS4197945 357 + 0.518207
rpsN 30S ribosomal subunit protein S14chromosome CDS4193532 306 + 0.526144
rpsO 30S ribosomal subunit protein S15chromosome CDS3311270 270 - 0.518519
rpsP 30S ribosomal subunit protein S16chromosome CDS2744593 249 - 0.514056
rpsQ 30S ribosomal subunit protein S17chromosome CDS4191848 255 + 0.47451
rpsR 30S ribosomal subunit protein S18chromosome CDS4430519 228 + 0.526316
rpsS 30S ribosomal subunit protein S19chromosome CDS4189890 279 + 0.487455
rpsT 30S ribosomal subunit protein S20chromosome CDS20815 264 - 0.465909
rpsU 30S ribosomal subunit protein S21chromosome CDS3209437 216 + 0.518519
rrmJ 23S rRNA methyltransferasechromosome CDS3326890 630 - 0.504762
rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependentchromosome CDS4203920 1290 - 0.496899
rsmC 16S RNA m2G1207 methylasechromosome CDS4611349 1032 - 0.557171
rsuA 16S rRNA pseudouridylate 516 synthasechromosome CDS2283122 696 - 0.528736
rumA 23S rRNA (uracil-5)-methyltransferasechromosome CDS2912355 1302 - 0.514593
rumB 23S rRNA m(5)U747 methyltransferasechromosome CDS898940 1128 + 0.546099
selB selenocysteinyl-tRNA-specific translation factorchromosome CDS3880554 1845 + 0.563686
serS seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serinechromosome CDS939850 1293 + 0.526682
smpA small membrane lipoproteinchromosome CDS2752261 342 + 0.494152
speG spermidine N1-acetyltransferasechromosome CDS1657898 561 + 0.468806
srmB ATP-dependent RNA helicasechromosome CDS2711552 1335 + 0.547566
tadA tRNA-specific adenosine deaminasechromosome CDS2696010 537 - 0.541899
tdcF predicted L-PSP (mRNA) endoribonucleasechromosome CDS3258377 390 - 0.525641
tgt tRNA-guanine transglycosylasechromosome CDS425361 1128 + 0.513298
thrS threonyl-tRNA synthetasechromosome CDS1802356 1929 - 0.495594
trmA tRNA (uracil-5-)-methyltransferasechromosome CDS3473411 1101 + 0.508629
trmD tRNA (guanine-1-)-methyltransferasechromosome CDS2743228 768 - 0.533854
trmH tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS3815211 690 - 0.553623
trmU tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferasechromosome CDS1194244 1107 - 0.537489
trpS tryptophanyl-tRNA synthetasechromosome CDS4126778 1005 + 0.520398
truA pseudouridylate synthase Ichromosome CDS2440270 813 - 0.553506
truB tRNA pseudouridine synthasechromosome CDS3311688 945 - 0.524868
tsf protein chain elongation factor EF-Tschromosome CDS190857 852 + 0.498826
tufA protein chain elongation factor EF-Tuchromosome CDS4169087 1185 + 0.532489
tufB protein chain elongation factor EF-Tuchromosome CDS3459553 1185 - 0.534177
tyrS tyrosyl-tRNA synthetasechromosome CDS1717662 1275 - 0.515294
valS valyl-tRNA synthetasechromosome CDS4485662 2856 - 0.545868
yadB glutamyl-Q tRNA(Asp) synthetasechromosome CDS159186 927 - 0.536138
yaeJ hypothetical proteinchromosome CDS214833 423 + 0.541371
yaiF hypothetical proteinchromosome CDS381728 387 - 0.45478
ybfP hypothetical proteinchromosome CDS715834 495 + 0.454545
ycdK hypothetical proteinchromosome CDS1072195 387 - 0.540052
ychF predicted GTP-binding proteinchromosome CDS1258298 1092 - 0.510073
yciH hypothetical proteinchromosome CDS1344372 327 + 0.498471
yciO hypothetical proteinchromosome CDS1325812 621 + 0.481481
yebU predicted methyltransferasechromosome CDS1921937 1440 + 0.518056
yeiP predicted elongtion factorchromosome CDS2268784 573 + 0.499127
yfbG fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylasechromosome CDS2372709 1983 + 0.511346
yfhQ predicted methyltransferasechromosome CDS2661239 741 - 0.554656
yfiA cold shock protein associated with 30S ribosomal subunitchromosome CDS2735810 342 + 0.461988
yfiF predicted methyltransferasechromosome CDS2716147 1038 - 0.56262
ygjO predicted methyltransferase small domainchromosome CDS3233395 1137 - 0.538259
yhbH predicted ribosome-associated, sigma 54 modulation proteinchromosome CDS3346028 288 + 0.447917
yhbY predicted RNA-binding proteinchromosome CDS3327645 294 + 0.486395
yibK predicted rRNA methylasechromosome CDS3858727 474 - 0.550633
yjbC 23S rRNA pseudouridine synthasechromosome CDS4233944 873 + 0.515464
yjbN tRNA-dihydrouridine synthase Achromosome CDS4265259 1038 + 0.536609
yjeJ hypothetical proteinchromosome CDS4378045 870 - 0.451724
yjgF ketoacid-binding proteinchromosome CDS4475207 387 - 0.529716
yjgH predicted mRNA endoribonucleasechromosome CDS4477494 396 - 0.472222
yjtD predicted rRNA methyltransferasechromosome CDS4645622 687 + 0.497817
ykgM predicted ribosomal proteinchromosome CDS311598 141 - 0.41844
ykgM predicted ribosomal proteinchromosome CDS311738 264 - 0.458333
yliG predicted SAM-dependent methyltransferasechromosome CDS877132 1326 - 0.526395
ymfC 23S rRNA pseudouridine synthasechromosome CDS1195875 654 - 0.512232
ymjA hypothetical proteinchromosome CDS1359137 246 - 0.48374
yoaB hypothetical proteinchromosome CDS1895081 345 + 0.515942
yqcB tRNA pseudouridine synthasechromosome CDS2921658 783 - 0.54023
yrdC dsRNA-binding proteinchromosome CDS4209001 573 + 0.521815
 
Escherichia coli, B171
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
orf43 pB171_043 hypothetical proteinpB171 CDS36749 288 - 0.395833
 
Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu2456 hypothetical proteinchromosome CDS2887754 621 - 0.425121
NA plu1274 hypothetical proteinchromosome CDS1482970 1017 + 0.470993
NA plu4498 hypothetical proteinchromosome CDS5255551 387 + 0.436693
NA plu2128 hypothetical proteinchromosome CDS2512098 345 - 0.434783
NA plu3505 hypothetical proteinchromosome CDS4096925 531 - 0.404896
NA plu2802 hypothetical proteinchromosome CDS3327952 633 + 0.406003
NA plu1412 hypothetical proteinchromosome CDS1694887 1857 + 0.332795
NA plu1641 hypothetical proteinchromosome CDS1961833 621 - 0.449275
NA plu3514 hypothetical proteinchromosome CDS4108262 1500 - 0.369333
NA plu3932 hypothetical proteinchromosome CDS4614368 921 + 0.409338
NA plu3063 hypothetical proteinchromosome CDS3566206 537 - 0.284916
NA plu2537 hypothetical proteinchromosome CDS2984737 312 - 0.387821
NA plu4197 hypothetical proteinchromosome CDS4911020 495 - 0.507071
NA plu2200 hypothetical proteinchromosome CDS2587792 1344 + 0.424107
NA plu4088 hypothetical proteinchromosome CDS4775714 966 + 0.5
NA plu4042 hypothetical proteinchromosome CDS4731412 288 + 0.409722
NA plu2426 hypothetical proteinchromosome CDS2848897 327 - 0.452599
NA plu2767 hypothetical proteinchromosome CDS3279612 399 + 0.360902
NA plu0951 hypothetical proteinchromosome CDS1093367 366 + 0.486339
NA plu4265 hypothetical proteinchromosome CDS4989752 1494 + 0.362784
NA plu4331 hypothetical proteinchromosome CDS5060010 159 + 0.415094
NA plu3989 hypothetical proteinchromosome CDS4675250 600 - 0.421667
NA plu1205 hypothetical proteinchromosome CDS1387652 855 - 0.48538
NA plu2861 elongation factor Pchromosome CDS3396476 573 + 0.43281
NA plu1266 hypothetical proteinchromosome CDS1466407 363 - 0.360882
NA plu4327 hypothetical proteinchromosome CDS5057199 483 - 0.36853
NA plu2054 hypothetical proteinchromosome CDS2425992 1092 - 0.482601
NA plu2704 hypothetical proteinchromosome CDS3204991 3879 + 0.34777
NA plu0875 glutamyl-tRNA synthetasechromosome CDS1002027 951 - 0.415352
NA plu0665 hypothetical proteinchromosome CDS764002 771 + 0.440986
NA plu4834 hypothetical proteinchromosome CDS5608526 489 + 0.419223
NA plu4830 hypothetical proteinchromosome CDS5604621 1173 + 0.263427
NA plu2452 hypothetical proteinchromosome CDS2878920 933 - 0.500536
NA plu1513 hypothetical proteinchromosome CDS1812841 543 - 0.379374
NA plu3926 hypothetical proteinchromosome CDS4604899 819 - 0.411477
NA plu0885 hypothetical proteinchromosome CDS1014542 453 + 0.335541
NA plu4692 hypothetical proteinchromosome CDS5477006 570 - 0.403509
NA plu1458 hypothetical proteinchromosome CDS1751484 852 - 0.420188
NA plu3062 hypothetical proteinchromosome CDS3565635 345 - 0.356522
NA plu0201 tyrosyl-tRNA synthetasechromosome CDS207548 1200 + 0.365
NA plu1584 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1890645 1134 + 0.435626
NA plu0228 hypothetical proteinchromosome CDS237589 1464 - 0.432377
NA plu2264 hypothetical proteinchromosome CDS2662395 288 - 0.395833
NA plu2644 hypothetical proteinchromosome CDS3096679 1800 + 0.405
NA plu2936 hypothetical proteinchromosome CDS3449821 684 + 0.396199
NA plu3566 hypothetical proteinchromosome CDS4201767 852 - 0.453052
NA plu0255 hypothetical proteinchromosome CDS271784 291 + 0.388316
NA plu3320 hypothetical proteinchromosome CDS3939979 522 - 0.448276
NA plu4364 hypothetical proteinchromosome CDS5097466 1038 - 0.442197
NA plu3981 hypothetical proteinchromosome CDS4669337 324 + 0.37963
NA plu1512 hypothetical proteinchromosome CDS1811675 933 + 0.46731
NA plu2105 hypothetical proteinchromosome CDS2489450 291 + 0.42268
NA plu1932 hypothetical proteinchromosome CDS2299279 261 - 0.383142
NA plu3190 hypothetical proteinchromosome CDS3752821 945 - 0.456085
NA plu3285 hypothetical proteinchromosome CDS3899480 726 - 0.453168
NA plu1413 hypothetical proteinchromosome CDS1696740 675 + 0.345185
NA plu2385 hypothetical proteinchromosome CDS2800483 450 + 0.413333
NA plu4574 hypothetical proteinchromosome CDS5337969 735 - 0.49932
NA plu4537 hypothetical proteinchromosome CDS5299591 294 + 0.428571
alaS plu1250 alanyl-tRNA synthetasechromosome CDS1445660 2631 + 0.429875
ansA plu2554 cytoplasmic asparaginase Ichromosome CDS2998855 1020 + 0.439216
ansB plu1616 L-asparaginase II precursor (L-asparagine amidohydrolase II) (L-asnase II) (colaspase)chromosome CDS1932051 1044 + 0.464559
argS plu2092 arginyl-tRNA synthetasechromosome CDS2478472 1731 - 0.470826
asnS plu1753 asparaginyl-tRNA synthetasechromosome CDS2091255 1401 - 0.480371
aspS plu2107 aspartyl-tRNA synthetasechromosome CDS2490539 1773 + 0.473209
cafA plu4067 ribonuclease G (RNase G) (cytoplasmic axial filament protein)chromosome CDS4752198 1470 - 0.432653
cca plu3972 tRNA nucleotidyltransferase (tRNA adenylyltransferase) (tRNA CCA-pyrophosphorylase) (CCA-adding enzyme)chromosome CDS4658672 1251 + 0.463629
cysS plu3804 cysteinyl-tRNA synthetasechromosome CDS4470836 1386 - 0.457431
deaD plu4523 inducible ATP-independent RNA helicasechromosome CDS5281393 1935 - 0.483204
def plu4695 peptide deformylasechromosome CDS5479412 513 + 0.405458
dtd plu0242 D-tyrosyl-tRNA deacylasechromosome CDS257806 438 + 0.481735
efp plu4130 elongation factor Pchromosome CDS4818449 567 - 0.426808
fmt plu4696 methionyl-tRNA formyltransferasechromosome CDS5479949 948 + 0.412447
frr plu0675 ribosome releasing factorchromosome CDS775085 558 + 0.444444
fusA plu0431 translation elongation factor EF-Gchromosome CDS456977 2109 + 0.471788
genX plu4121 lysyl-tRNA synthetasechromosome CDS4809126 978 - 0.445808
glnS plu1319 glutaminyl-tRNA synthetasechromosome CDS1531273 1668 + 0.444245
gltX plu1401 glutamyl-tRNA synthetasechromosome CDS1682226 1419 - 0.459478
glyQ plu0293 glycyl-tRNA synthetase alpha subunitchromosome CDS310052 915 + 0.477596
glyS plu0294 glycyl-tRNA synthetase beta subunitchromosome CDS310976 2070 + 0.474879
gshB plu1184 glutathione synthetasechromosome CDS1366819 951 - 0.457413
hemK plu2071 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2453247 849 + 0.451119
hisS plu1377 histidyl-tRNA synthetasechromosome CDS1656438 1278 + 0.472613
hslR plu0098 Heat shock protein 15 (HSP15)chromosome CDS94864 417 + 0.441247
ileS plu0591 isoleucyl-tRNA synthetasechromosome CDS671962 2814 + 0.471571
infA plu1595 translation initiation factor IF-1chromosome CDS1902666 219 - 0.456621
infB plu4529 translation initiation factor IF-2chromosome CDS5288806 2730 - 0.461538
infC plu2668 translation initiation factor IF-3chromosome CDS3121722 426 - 0.457746
ksgA plu0609 dimethyladenosine transferasechromosome CDS691139 819 - 0.454212
leuS plu1303 leucyl-tRNA synthetasechromosome CDS1510833 2583 - 0.466899
lysS plu3548 lysyl-tRNA synthetasechromosome CDS4181518 1515 - 0.462706
map plu0671 methionine aminopeptidasechromosome CDS771127 798 - 0.444862
miaA plu4582 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5347517 942 - 0.451168
miaB plu1312 tRNA-methylthiotransferase MiaB proteinchromosome CDS1521327 1431 - 0.45283
miaE plu0721 tRNA-(MS[2]IO[6]A)-hydroxylasechromosome CDS830155 762 - 0.400262
pbgP3 plu2658 hypothetical proteinchromosome CDS3110950 1983 - 0.411498
pcnB plu0874 Poly(A) polymerase (PAP) (Plasmid copy number protein)chromosome CDS1000434 1566 - 0.458493
pheS plu2665 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS3119774 984 - 0.441057
pnp plu4525 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPase) (CAP87K)chromosome CDS5284616 2130 - 0.450704
prfA plu2070 peptide chain release factor 1chromosome CDS2452165 1083 + 0.486611
prfB plu3549 Peptide chain release factor 2 (RF-2)chromosome CDS4183042 933 - 0.442658
prfC plu4249 peptide chain release factor 3chromosome CDS4971601 1590 - 0.460377
prmA plu4087 ribosomal protein L11 methyltransferasechromosome CDS4774540 891 + 0.464646
proS plu0692 prolyl-tRNA synthetasechromosome CDS795163 1719 - 0.456079
pth plu2055 peptidyl-tRNA hydrolasechromosome CDS2427225 591 - 0.450085
queA plu3905 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS4577112 1068 - 0.455056
rbfA plu4528 ribosome-binding factor Achromosome CDS5288330 411 - 0.43309
rhlB plu4665 ATP-dependent RNA helicasechromosome CDS5438290 1287 + 0.466977
rhlE plu1511 ATP-dependent RNA helicase RhlEchromosome CDS1810367 1305 + 0.465134
rimJ plu2090 Ribosomal-protein-alanine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein S5)chromosome CDS2474591 585 + 0.420513
rimM plu1258 16S rRNA-processing proteinchromosome CDS1456325 558 + 0.426523
rluA plu0614 ribosomal large subunit pseudouridine synthase A (pseudouridylate synthase) (uracil hydrolyase)chromosome CDS698009 651 - 0.473118
rluC plu2840 ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase)chromosome CDS3368433 960 - 0.434375
rluD plu1268 ribosomal large subunit pseudouridine synthase D (pseudouridylate synthase) (uracil hydrolyase)chromosome CDS1467927 978 + 0.449898
rmf plu1769 ribosome modulation factor (protein E)chromosome CDS2113137 168 + 0.488095
rnd plu2135 Ribonuclease D (RNase D)chromosome CDS2519651 1128 + 0.447695
rne plu2841 ribonuclease E (RNase E)chromosome CDS3369952 3105 + 0.463446
rnpA plu4908 ribonuclease Pchromosome CDS5688016 360 - 0.494444
rph plu4870 ribonuclease PHchromosome CDS5643409 729 - 0.478738
rplA plu0436 50S ribosomal protein L1chromosome CDS462141 702 + 0.472934
rplB plu4723 50S ribosomal protein L2chromosome CDS5495812 825 - 0.466667
rplC plu4726 50S ribosomal protein L3chromosome CDS5497577 630 - 0.465079
rplD plu4725 50S ribosomal protein L4chromosome CDS5496955 606 - 0.457096
rplE plu4714 50S ribosomal protein L5chromosome CDS5492155 540 - 0.468519
rplF plu4711 50S ribosomal protein L6chromosome CDS5490863 534 - 0.47191
rplI plu4570 50S ribosomal protein L9chromosome CDS5336224 453 - 0.463576
rplJ plu0437 50S ribosomal protein L10chromosome CDS463159 507 + 0.493097
rplK plu0435 50S ribosomal protein L11chromosome CDS461709 429 + 0.473193
rplL plu0438 50S ribosomal protein L7/L12 (L8)chromosome CDS463729 372 + 0.462366
rplM plu4015 50S ribosomal protein L13chromosome CDS4704752 429 - 0.480186
rplN plu4716 50S ribosomal protein L14chromosome CDS5493034 372 - 0.489247
rplO plu4707 50S ribosomal protein L15chromosome CDS5489362 435 - 0.478161
rplP plu4719 50S ribosomal protein L16chromosome CDS5494030 411 - 0.491484
rplQ plu4701 50S ribosomal protein L17chromosome CDS5484857 393 - 0.521628
rplR plu4710 50S ribosomal protein L18chromosome CDS5490500 354 - 0.49435
rplS plu1260 50S ribosomal protein L19chromosome CDS1457739 354 + 0.468927
rplT plu2666 50S ribosomal protein L20chromosome CDS3121029 357 - 0.490196
rplU plu4542 50S ribosomal protein L21chromosome CDS5303975 309 - 0.478964
rplV plu4721 50S ribosomal protein L22chromosome CDS5495172 333 - 0.48048
rplW plu4724 50S ribosomal protein L23chromosome CDS5496656 303 - 0.468647
rplX plu4715 50S ribosomal protein L24chromosome CDS5492709 315 - 0.419048
rplY plu2869 50S ribosomal protein L25chromosome CDS3405583 285 + 0.445614
rpmA plu4541 50S ribosomal protein L27chromosome CDS5303698 258 - 0.468992
rpmB plu4864 50S ribosomal protein L28chromosome CDS5638763 237 - 0.485232
rpmC plu4718 50S ribosomal protein L29chromosome CDS5493839 192 - 0.46875
rpmD plu4708 50S ribosomal protein L30chromosome CDS5489800 180 - 0.427778
rpmE plu4758 50S ribosomal protein L31chromosome CDS5539633 216 - 0.449074
rpmE plu0036 50S ribosomal protein L31chromosome CDS30574 255 - 0.407843
rpmF plu2837 50S ribosomal protein L32chromosome CDS3366996 171 - 0.450292
rpmG plu4863 50S ribosomal protein L33chromosome CDS5638584 168 - 0.369048
rpmH plu4909 50S ribosomal protein L34chromosome CDS5688392 141 - 0.510638
rpmI plu2667 50S ribosomal protein L35chromosome CDS3121427 198 - 0.469697
rpmJ plu0035 50S ribosomal protein L36chromosome CDS30414 141 - 0.390071
rpsA plu1622 30S ribosomal protein S1chromosome CDS1938005 1674 + 0.457587
rpsB plu0672 30S ribosomal protein S2chromosome CDS772356 726 + 0.438017
rpsC plu4720 30S ribosomal protein S3chromosome CDS5494453 702 - 0.464387
rpsD plu4703 30S ribosomal protein S4chromosome CDS5486305 621 - 0.483092
rpsE plu4709 30S ribosomal protein S5chromosome CDS5489985 501 - 0.493014
rpsF plu4573 30S ribosomal protein S6chromosome CDS5337270 396 - 0.487374
rpsG plu0430 30S ribosomal protein S7chromosome CDS456426 471 + 0.469214
rpsH plu4712 30S ribosomal protein S8chromosome CDS5491411 393 - 0.470738
rpsI plu4014 30S ribosomal protein S9chromosome CDS4704344 393 - 0.491094
rpsJ plu4727 30S ribosomal protein S10chromosome CDS5498239 312 - 0.49359
rpsK plu4704 30S ribosomal protein S11chromosome CDS5486963 390 - 0.494872
rpsL plu0429 30S ribosomal protein S12chromosome CDS455954 375 + 0.490667
rpsM plu4705 30S ribosomal protein S13chromosome CDS5487368 357 - 0.492997
rpsN plu4713 30S ribosomal protein S14chromosome CDS5491837 306 - 0.473856
rpsO plu4526 30S ribosomal protein S15chromosome CDS5286991 270 - 0.451852
rpsP plu1257 30S ribosomal protein S16chromosome CDS1456067 249 + 0.477912
rpsQ plu4717 30S ribosomal protein S17chromosome CDS5493585 255 - 0.407843
rpsR plu4571 30S ribosomal protein S18chromosome CDS5336715 228 - 0.495614
rpsS plu4722 30S ribosomal protein S19chromosome CDS5495519 279 - 0.469534
rpsT plu0589 30S ribosomal protein S20chromosome CDS670379 264 - 0.435606
rpsU plu3977 30S ribosomal protein S21chromosome CDS4663462 216 + 0.472222
rrmJ plu4536 Ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) (Cell division protein Fchromosome CDS5298821 630 - 0.45873
rsmB plu4697 RsmB protein (SUN/FMU protein), 16S RNA m5C967 methyltransferasechromosome CDS5480967 1290 + 0.404651
rsmC plu4252 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4974306 1017 + 0.457227
rsuA plu2867 ribosomal small subunit pseudouridine synthase A (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (uracil hydrolyase)chromosome CDS3402676 702 - 0.448718
rumA plu0909 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1045574 1317 + 0.454822
selB plu4898 selenocysteine-specific elongation factor (SelB translation factor)chromosome CDS5674296 1860 + 0.46828
serS plu1604 seryl-tRNA synthetasechromosome CDS1915325 1290 + 0.449612
smpA plu3375 Small protein A precursorchromosome CDS4004248 348 + 0.439655
speG plu2762 spermidine N1-acetyltransferase (diamine acetyltransferase)chromosome CDS3272370 567 + 0.428571
srmB plu3349 ATP-dependent RNA helicasechromosome CDS3976851 1338 + 0.46562
tgt plu3904 queuine tRNA-ribosyltransferasechromosome CDS4575837 1125 - 0.449778
thrS plu2669 threonyl-tRNA synthetasechromosome CDS3122265 1929 - 0.439088
trmA plu4736 tRNA (uracil-5-)-methyltransferasechromosome CDS5514156 1101 + 0.404178
trmD plu1259 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS1456922 753 + 0.486056
trmU plu2804 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS3329111 1104 + 0.455616
trpS plu0084 tryptophanyl-tRNA synthetasechromosome CDS79372 1038 - 0.45183
truA plu3173 tRNA pseudouridine synthase Achromosome CDS3733092 840 - 0.458333
truB plu4527 tRNA pseudouridine synthase Bchromosome CDS5287383 948 - 0.42827
tsf plu0673 elongation factor Tschromosome CDS773232 852 + 0.448357
tuf plu4730 elongation factor Tuchromosome CDS5500355 1185 - 0.511392
tuf plu0432 elongation factor Tuchromosome CDS459158 1185 + 0.511392
tyrS plu2596 tyrosyl-tRNA synthetasechromosome CDS3038923 1275 - 0.443922
valS plu4483 valyl-tRNA synthetasechromosome CDS5235451 2898 + 0.461353
wblY plu4824 WblY proteinchromosome CDS5601139 678 + 0.30531
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
aph SC026 aminoglycoside 3'-phosphotransferasepSC138 CDS21137 816 - 0.438726
relE SC166 hypothetical proteinpSC138 CDS126052 288 + 0.46875
stra SC065 StrApSC138 CDS51043 894 + 0.541387
tniBdelta1 SC036 NTP-binding proteinpSC138 CDS28215 993 - 0.64854
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC3905 putative periplasmic proteinchromosome CDS4157043 1026 - 0.499025
NA SC0385 putative periplasmic proteinchromosome CDS430849 501 + 0.379242
NA SC1139 50S ribosomal protein L32chromosome CDS1255904 174 + 0.528736
NA SC3451 putative ribonucleoprotein related-proteinchromosome CDS3636425 1554 - 0.601673
NA SC2529 putative cytoplasmic proteinchromosome CDS2694675 669 + 0.442451
RL15 SC3355 50S ribosomal protein L15chromosome CDS3541809 435 - 0.544828
RL34 SC3757 50S ribosomal protein L34chromosome CDS3984678 141 + 0.531915
RS12 SC3382 30S ribosomal protein S12chromosome CDS3556778 435 - 0.508046
RS21 SC3156 30S ribosomal protein S21chromosome CDS3336129 216 + 0.518519
alaS SC2760 alanyl-tRNA synthetasechromosome CDS2925783 2631 - 0.550361
ansA SC1316 cytoplasmic asparaginase Ichromosome CDS1412784 1089 - 0.525253
ansB SC3046 periplasmic L-asparaginase IIchromosome CDS3224973 1047 - 0.52531
argS SC1916 arginyl-tRNA synthetasechromosome CDS2025177 1734 + 0.54902
asnS SC0957 asparaginyl-tRNA synthetasechromosome CDS1076755 1401 - 0.551035
aspG SC3532 putative L-asparaginasechromosome CDS3728555 1044 - 0.510536
aspS SC1909 aspartyl-tRNA synthetasechromosome CDS2017692 1773 - 0.562888
cafA SC3308 RNase Gchromosome CDS3494582 1470 - 0.528571
cca SC3151 tRNA nucleotidyl transferasechromosome CDS3331296 1242 + 0.588567
cysS SC0576 cysteinyl-tRNA synthetasechromosome CDS643485 1386 + 0.549062
dbpA SC1650 ATP-dependent RNA helicase, stimulated by 23S rRNAchromosome CDS1761471 1374 - 0.547307
deaD SC3221 cysteine sulfinate desulfinasechromosome CDS3402212 1956 - 0.576176
def SC3342 peptide deformylasechromosome CDS3531378 510 + 0.515686
efp SC4213 elongation factor Pchromosome CDS4514071 807 + 0.519207
fmt SC3343 methionyl-tRNA formyltransferasechromosome CDS3531903 948 + 0.548523
frr SC0219 ribosome releasing factorchromosome CDS253137 558 + 0.510753
ftsJ SC3235 Ribosomal RNA large subunit methyltransferase Jchromosome CDS3421468 627 - 0.511962
fusA SC3380 elongation factor EF-2chromosome CDS3554001 2115 - 0.51773
glnS SC0707 glutaminyl-tRNA synthetasechromosome CDS789307 1668 + 0.536571
gltX SC2416 glutamyl-tRNA synthetasechromosome CDS2545890 1416 - 0.550847
glyQ SC3591 glycyl-tRNA synthetase alpha subunitchromosome CDS3795487 912 - 0.557018
glyS SC3590 glycyl-tRNA synthetase beta subunitchromosome CDS3793408 2070 - 0.571498
gshB SC3035 glutathione synthetasechromosome CDS3216430 948 + 0.543249
hemK SC1769 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1885478 834 - 0.58753
hisS SC2519 histidyl-tRNA synthetasechromosome CDS2675551 1275 - 0.560784
ileS SC0040 isoleucyl-tRNA synthetasechromosome CDS48073 2871 + 0.547893
infA SC0907 translation initiation factor IF-1chromosome CDS1014278 219 - 0.488584
infB SC3227 translation initiation factor IF-2chromosome CDS3409637 2679 - 0.554685
infC SC1353 Translation initiation factor IF-3chromosome CDS1450348 435 + 0.471264
ksgA SC0085 dimethyladenosine transferasechromosome CDS96881 822 - 0.524331
lasT SC4445 putative tRNA/tRNA methyltransferasechromosome CDS4754990 687 + 0.52984
leuS SC0678 leucyl-tRNA synthetasechromosome CDS751672 2676 - 0.553812
ligT SC0188 2'-5' RNA ligasechromosome CDS213857 531 - 0.627119
lysS SC2980 lysyl-tRNA synthetasechromosome CDS3157391 1518 - 0.541502
map SC0215 methionine aminopeptidasechromosome CDS249041 795 - 0.527044
miaA SC4236 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4538244 951 + 0.545741
miaB SC0698 methylthiolation of isopentenylated A37 derivatives in rRNAchromosome CDS777021 1467 - 0.539196
miaE SC4326 hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNAchromosome CDS4627298 813 + 0.546125
ninZ SC0345 NinZchromosome CDS390208 180 + 0.538889
pcnB SC0184 poly(A) polymerase Ichromosome CDS209980 1419 - 0.561663
pheS SC1356 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1451784 984 + 0.536585
pnp SC3223 polynucleotide phosphorylase, member of mRNA degradosomechromosome CDS3405274 2166 - 0.558172
prfA SC1770 peptide chain release factor 1chromosome CDS1886311 1083 - 0.577101
prfB SC2981 peptide chain release factor RF-2chromosome CDS3158918 882 - 0.543084
prfC SC4408 peptide chain release factor 3chromosome CDS4716197 1590 + 0.546541
prfH SC0316 peptide chain release factor 2chromosome CDS364165 615 + 0.557724
prmA SC3321 ribosomal protein L11 methyltransferasechromosome CDS3508463 882 + 0.558957
proS SC0241 prolyl-tRNA synthetasechromosome CDS278453 1644 - 0.54562
pth SC1777 peptidyl-tRNA hydrolasechromosome CDS1894073 609 + 0.515599
queA SC0446 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS504052 1065 + 0.560563
rbfA SC3226 ribosome-binding factor Achromosome CDS3409015 402 - 0.537313
relE SC4305 putative inner membrane proteinchromosome CDS4606190 285 + 0.477193
rhlB SC3820 ATP-dependent RNA helicasechromosome CDS4058556 1266 - 0.548183
rhlE SC0817 putative ATP-dependent RNA helicasechromosome CDS914182 1362 + 0.586637
rimJ SC1115 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5chromosome CDS1232559 585 + 0.511111
rimK SC0868 ribosomal protein S6 modification proteinchromosome CDS974308 903 + 0.563677
rimL SC1607 acetyl transferase, modifies N-terminal serine of 50S ribosomal subunit protein L7/L12chromosome CDS1714199 540 - 0.505556
rimM SC2676 16S rRNA-processing proteinchromosome CDS2833310 552 - 0.498188
rluA SC0090 23S rRNA pseudouridylate 746 synthasechromosome CDS103549 660 - 0.574242
rluC SC1134 23S rRNA pseudouridylate synthasechromosome CDS1252104 1044 + 0.546935
rluD SC2665 pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA)chromosome CDS2822784 981 - 0.533129
rmf SC1018 ribosome modulation factor (involved in dimerization of 70S ribosomes)chromosome CDS1138255 168 + 0.535714
rnd SC1810 RNase D, processes tRNA precursorchromosome CDS1929195 1128 - 0.553191
rne SC1132 RNase Echromosome CDS1248408 3207 - 0.584035
rnpA SC3758 ribonuclease Pchromosome CDS3984868 417 + 0.556355
rph SC3657 ribonuclease PHchromosome CDS3868979 717 - 0.553696
rplA SC4034 50S ribosomal protein L1chromosome CDS4297554 705 + 0.531915
rplB SC3371 50S ribosomal protein L2chromosome CDS3548246 822 - 0.53163
rplC SC3374 50S ribosomal protein L3chromosome CDS3550000 630 - 0.514286
rplD SC3373 50S ribosomal protein L4chromosome CDS3549384 606 - 0.529703
rplE SC3362 50S ribosomal protein L5chromosome CDS3544603 540 - 0.496296
rplF SC3359 50S ribosomal protein L6chromosome CDS3543311 534 - 0.514981
rplI SC4268 50S ribosomal protein L9chromosome CDS4566196 450 + 0.504444
rplJ SC4035 50S ribosomal protein L10chromosome CDS4298678 498 + 0.522088
rplK SC4033 50S ribosomal protein L11chromosome CDS4297122 429 + 0.526807
rplL SC4036 50S ribosomal protein L7/L12chromosome CDS4299284 324 + 0.475309
rplM SC3283 50S ribosomal protein L13chromosome CDS3467555 444 - 0.506757
rplN SC3364 50S ribosomal protein L14chromosome CDS3545482 372 - 0.5
rplP SC3367 50S ribosomal protein L16chromosome CDS3546462 411 - 0.523114
rplQ SC3349 50S ribosomal protein L17chromosome CDS3537318 384 - 0.544271
rplR SC3358 50S ribosomal protein L18chromosome CDS3542948 354 - 0.528249
rplS SC2674 50S ribosomal protein L19chromosome CDS2832110 348 - 0.488506
rplT SC1355 50S ribosomal protein L20chromosome CDS1451126 357 + 0.498599
rplW SC3372 50S ribosomal protein L23chromosome CDS3549085 303 - 0.488449
rplX SC3363 50S ribosomal protein L24chromosome CDS3545157 315 - 0.460317
rplY SC2241 50S ribosomal protein L25chromosome CDS2350283 285 + 0.512281
rpmA SC3241 50S ribosomal protein L27chromosome CDS3427241 258 - 0.492248
rpmB SC3651 50S ribosomal protein L28chromosome CDS3864526 237 - 0.518987
rpmC SC3366 50S ribosomal protein L29chromosome CDS3546271 192 - 0.53125
rpmD SC3356 50S ribosomal protein L30chromosome CDS3542247 180 - 0.505556
rpmE SC3985 50S ribosomal protein L31chromosome CDS4238724 312 + 0.50641
rpmE2 SC0511 50S ribosomal protein L31chromosome CDS570720 261 + 0.436782
rpmG SC3650 50S ribosomal protein L33chromosome CDS3864338 168 - 0.410714
rpmI SC1354 50S ribosomal protein L35chromosome CDS1450863 213 + 0.474178
rpmJ SC3353 50S ribosomal protein L36chromosome CDS3540322 117 - 0.478632
rpmJ2 SC0512 50S ribosomal protein L36chromosome CDS570986 141 + 0.432624
rpsA SC0935 30S ribosomal protein S1chromosome CDS1049737 1674 + 0.51135
rpsB SC0216 30S ribosomal protein S2chromosome CDS250286 726 + 0.512397
rpsC SC3368 30S ribosomal protein S3chromosome CDS3546885 702 - 0.511396
rpsD SC3351 30S ribosomal protein S4chromosome CDS3538757 621 - 0.513688
rpsE SC3357 30S ribosomal protein S5chromosome CDS3542430 504 - 0.507937
rpsF SC4265 30S ribosomal protein S6chromosome CDS4565206 396 + 0.530303
rpsG SC3381 30S ribosomal protein S7chromosome CDS3556212 471 - 0.503185
rpsH SC3360 30S ribosomal protein S8chromosome CDS3543857 393 - 0.501272
rpsI SC3282 30S ribosomal protein S9chromosome CDS3467147 393 - 0.531807
rpsJ SC3375 30S ribosomal protein S10chromosome CDS3550662 312 - 0.548077
rpsK SC3352 30S ribosomal protein S11chromosome CDS3539411 390 - 0.515385
rpsN SC3361 30S ribosomal protein S14chromosome CDS3544283 306 - 0.522876
rpsO SC3224 30S ribosomal protein S15chromosome CDS3407651 270 - 0.5
rpsP SC2677 30S ribosomal protein S16chromosome CDS2833877 309 - 0.527508
rpsQ SC3365 30S ribosomal protein S17chromosome CDS3546017 255 - 0.47451
rpsR SC4267 30S ribosomal protein S18chromosome CDS4565927 228 + 0.52193
rpsS SC3370 30S ribosomal protein S19chromosome CDS3547951 279 - 0.491039
rpsT SC0037 30S ribosomal protein S20chromosome CDS46534 264 - 0.465909
rsmC SC4405 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4713447 1029 - 0.5724
rsuA SC2239 16S rRNA pseudouridylate 516 synthasechromosome CDS2347551 696 - 0.54023
rumA SC2897 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3064874 1296 - 0.544753
selB SC3606 selenocysteinyl-tRNA-specific translation factorchromosome CDS3813395 1851 - 0.569422
serS SC0917 seryl-tRNA synthetasechromosome CDS1027744 1293 + 0.540603
smpA SC2685 small membrane protein Achromosome CDS2842252 339 + 0.516224
speG SC1519 spermidine N1-acetyltransferasechromosome CDS1618870 561 - 0.481283
spoU SC3667 putative tRNA/rRNA methyltransferasechromosome CDS3878486 690 + 0.543478
srmB SC2648 ATP-dependent RNA helicasechromosome CDS2800126 1335 + 0.54382
sun SC3344 putative rRNA methylasechromosome CDS3532902 1290 + 0.537209
tgt SC0447 queuine tRNA-ribosyltransferasechromosome CDS505313 1128 + 0.52039
thrS SC1352 threonyl-tRNA synthetasechromosome CDS1448308 1929 + 0.508035
trmA SC4018 tRNA (uracil-5-)-methyltransferasechromosome CDS4281005 1101 - 0.518619
trmD SC2675 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2832498 768 - 0.535156
trmU SC1185 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1302953 1152 - 0.539931
trpS SC3413 tryptophanyl-tRNA synthetasechromosome CDS3589737 1005 - 0.517413
trpS2 SC4363 tryptophanyl-tRNA synthetasechromosome CDS4669504 1014 - 0.531558
truA SC2370 tRNA pseudouridine synthase Achromosome CDS2494872 813 - 0.558426
truB SC3225 tRNA pseudouridine synthase Bchromosome CDS3408071 945 - 0.556614
tsf SC0217 elongation factor Tschromosome CDS251197 924 + 0.517316
tuf SC4030 elongation factor Tuchromosome CDS4294620 1185 + 0.540084
tuf SC3379 elongation factor Tuchromosome CDS3552745 1230 - 0.538211
tyrS SC1467 tyrosyl-tRNA synthetasechromosome CDS1561172 1275 + 0.531765
valS SC4331 valyl-tRNA synthetasechromosome CDS4630966 2856 - 0.566527
yadB SC0185 glutamyl-tRNA synthetasechromosome CDS211539 942 - 0.579618
yaeJ SC0240 hypothetical proteinchromosome CDS277228 423 + 0.553191
ybjF SC0875 23S rRNA (uracil-5-)-methyltransferasechromosome CDS980860 1131 + 0.560566
ychF SC1778 putative GTP-binding proteinchromosome CDS1894798 1092 + 0.527473
yciH SC1701 hypothetical proteinchromosome CDS1813392 327 - 0.461774
yciL SC1716 putative ribosomal large subunit pseudouridine synthasechromosome CDS1828936 876 - 0.56621
yciO SC1717 putative translation factorchromosome CDS1829912 621 - 0.536232
yebY SC1878 putative periplasmic or exported proteinchromosome CDS1989555 354 - 0.533898
yeiP SC2227 elongation factor Pchromosome CDS2334577 573 + 0.502618
yfcB SC2387 putative methylasechromosome CDS2510072 933 - 0.53269
yfhC SC2563 putative Cytosine/adenosine deaminasechromosome CDS2734454 552 - 0.563406
yfhQ SC2539 putative rRNA methylasechromosome CDS2704192 732 - 0.568306
yfiA SC2668 ribosome associated factor, stabilizes ribosomes against dissociationchromosome CDS2824905 339 + 0.471976
yfiF SC2653 putative tRNA/rRNA methyltransferasechromosome CDS2804636 1038 - 0.568401
ygdI SC0075 putative outer membrane lipoproteinchromosome CDS87688 231 + 0.484848
ygjO SC3167 paral putative methyltransferasechromosome CDS3350421 1137 - 0.534741
yhbH SC3259 putative sigma N modulation factorchromosome CDS3440608 288 + 0.461806
yhbY SC3236 putative RNA-binding protein containing KH domainchromosome CDS3422182 333 + 0.471471
yhdG SC3322 putative TIM-barrel enzyme, possibly dehydrogenasechromosome CDS3510006 966 + 0.536232
yibK SC3619 putative tRNA/rRNA methyltransferasechromosome CDS3832094 474 + 0.563291
yihZ SC3918 D-tyrosyl-tRNA deacylasechromosome CDS4172111 438 + 0.557078
yjbC SC4072 putative pseudouridine synthasechromosome CDS4350171 870 + 0.501149
yjbN SC4122 putative TIM-barrel enzyme, possibly dehydrogenase, nifR3 familychromosome CDS4398578 999 + 0.553554
yjeA SC4223 lysyl-tRNA synthetasechromosome CDS4520795 978 + 0.53681
yjfH SC4245 putative tRNA/rRNA methyltransferasechromosome CDS4548294 732 + 0.57377
yjgF SC4313 putative translation initiation inhibitorchromosome CDS4616986 387 - 0.547804
yjjJ SC4419 Hypothetical protein yjjJchromosome CDS4728366 1311 + 0.57132
yliG SC0847 putative Fe-S oxidoreductase family 1chromosome CDS949942 1326 - 0.53997
ymfC SC1188 putative ribosomal large subunit pseudouridine synthasechromosome CDS1304912 660 - 0.501515
yoaB SC1816 putative translation initiation inhibitorchromosome CDS1935732 345 + 0.501449
yohI SC2191 putative nitrogen regulation proteinchromosome CDS2293238 939 - 0.571885
yqcB SC2904 putative synthasechromosome CDS3075251 783 - 0.58493
yrdC SC3338 putative translation factorchromosome CDS3528531 603 - 0.532338
yrfH SC3429 heat shock protein, predicted small RNA-binding proteinchromosome CDS3606553 402 + 0.559702
 
Salmonella enterica subsp. enterica serovar Newport str. SL254, SL254
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SNSL254_pSN254_0002 hypothetical proteinpSN254 CDS867 288 + 0.572917
NA SNSL254_pSN254_0115 hypothetical proteinpSN254 CDS102909 501 + 0.473054
strA SNSL254_pSN254_0046 streptomycin resistance protein StrApSN254 CDS30715 804 - 0.562189
 
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA2605 putative phage genechromosome CDS2702343 528 - 0.422348
NA SPA0321 putative RNA methyltransferasechromosome CDS362348 732 + 0.572404
NA SPA0733 hypothetical proteinchromosome CDS812061 885 - 0.493785
NA SPA1315 hypothetical proteinchromosome CDS1400194 894 - 0.391499
NA SPA0299 putative periplasmic proteinchromosome CDS334269 231 - 0.463203
NA SPA3456 hypothetical proteinchromosome CDS3566755 228 - 0.535088
NA SPA0333 hypothetical proteinchromosome CDS371828 669 - 0.445441
NA SPA4327 tryptophanyl-tRNA synthetasechromosome CDS4501777 1014 - 0.526627
NA SPA3441 putative regulatory proteinchromosome CDS3550863 381 + 0.435696
NA SPA0081 putative lipoproteinchromosome CDS93371 231 + 0.484848
NA SPA2377 hypothetical proteinchromosome CDS2477948 501 - 0.387226
alaS SPA2685 alanyl-tRNA synthetasechromosome CDS2786792 2631 - 0.54656
ansA SPA1550 cytoplasmic asparaginase Ichromosome CDS1626026 1017 + 0.52409
ansB SPA2969 L-asparaginasechromosome CDS3074840 1047 - 0.528176
argS SPA0960 arginyl-tRNA synthetasechromosome CDS1033456 1734 - 0.55248
asnS SPA1798 asparaginyl-tRNA synthetasechromosome CDS1859605 1401 + 0.552463
aspS SPA0968 aspartyl-tRNA synthetasechromosome CDS1040902 1773 + 0.565144
cca SPA3072 tRNA nucleotidyltransferasechromosome CDS3179680 1242 + 0.589372
cysS SPA2186 cysteinyl-tRNA synthetasechromosome CDS2272832 1386 - 0.549062
dbpA SPA1230 ATP-dependent RNA helicase, stimulated by 23S rRNAchromosome CDS1297118 1374 + 0.556041
deaD SPA3147 ATP-dependent RNA helicasechromosome CDS3254940 1890 - 0.579365
def SPA3273 peptide deformylasechromosome CDS3383323 510 + 0.517647
efp SPA4151 elongation factor Pchromosome CDS4329349 567 + 0.522046
fmt SPA3274 methionyl-tRNA formyltransferasechromosome CDS3383848 948 + 0.549578
frr SPA0226 ribosome releasing factorchromosome CDS261296 558 + 0.508961
ftsJ SPA3164 cell division proteinchromosome CDS3274195 627 - 0.513557
fusA SPA3312 elongation factor EF-2chromosome CDS3405945 2115 - 0.51773
glnS SPA2055 glutaminyl-tRNA synthetasechromosome CDS2141671 1668 - 0.540168
gltX SPA0446 glutamyl-tRNA synthetasechromosome CDS511700 1416 + 0.55226
glyQ SPA3507 glycyl-tRNA synthetase alpha subunitchromosome CDS3629800 912 - 0.558114
glyS SPA3506 glycyl-tRNA synthetase beta subunitchromosome CDS3627721 2070 - 0.568116
gshB SPA2958 glutathione synthetasechromosome CDS3066298 948 + 0.541139
hemK SPA1098 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1168794 834 + 0.58753
hisS SPA0345 histidyl-tRNA synthetasechromosome CDS390346 1275 + 0.557647
hslR SPA3362 heat shock proteinchromosome CDS3458773 402 + 0.567164
ileS SPA0047 isoleucyl-tRNA synthetasechromosome CDS53821 2835 + 0.54709
infA SPA1845 translation initiation factor IF-1chromosome CDS1921970 219 + 0.484018
infB SPA3154 translation initiation factor IF-2chromosome CDS3262365 2679 - 0.553565
infC SPA1510 translation initiation factor IF-3chromosome CDS1584164 543 - 0.475138
ksgA SPA0091 dimethyladenosine transferasechromosome CDS102559 822 - 0.525547
lasT SPA4410 putative RNA methyltransferasechromosome CDS4584519 687 + 0.526929
leuS SPA2086 leucyl-tRNA synthetasechromosome CDS2170757 2583 + 0.557104
ligT SPA0194 2'-5' RNA ligasechromosome CDS221977 531 - 0.613936
lysS SPA2908 lysyl-tRNA synthetasechromosome CDS3016839 1518 - 0.542161
map SPA0221 methionine aminopeptidasechromosome CDS257200 795 - 0.522013
miaA SPA4177 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4353418 906 + 0.547461
miaB SPA2070 MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase))chromosome CDS2154159 1467 + 0.539196
miaE SPA4271 tRNA hydroxylasechromosome CDS4443417 813 + 0.546125
pcnB SPA0190 poly(A) polymerasechromosome CDS218100 1419 - 0.561663
pheS SPA1506 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1582179 984 - 0.536585
pnp SPA3149 polynucleotide phosphorylasechromosome CDS3258002 2136 - 0.56133
prfA SPA1097 peptide chain release factor 1chromosome CDS1167712 1083 + 0.578947
prfB SPA2909 peptide chain release factor 2chromosome CDS3018366 1098 - 0.540073
prfC SPA4374 peptide chain release factor 3chromosome CDS4546457 1590 + 0.545912
prfH SPA2440 peptide chain release factor 2chromosome CDS2535650 615 - 0.554472
prmA SPA3250 ribosomal protein L11 methyltransferasechromosome CDS3360253 882 + 0.557823
proS SPA0249 prolyl-tRNA synthetasechromosome CDS286607 1719 - 0.542757
pth SPA1090 peptidyl-tRNA hydrolasechromosome CDS1160424 609 - 0.517241
queA SPA2319 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS2412423 1065 - 0.559624
rbfA SPA3153 ribosome-binding factor Achromosome CDS3261743 402 - 0.534826
relE SPA4250 hypothetical proteinchromosome CDS4421657 285 + 0.470175
rfbF SPA0774 glucose-1-phosphate cytidylyltransferasechromosome CDS864521 774 + 0.437984
rhlE SPA1933 putative ATP-dependent RNA helicase rhlEchromosome CDS2013921 1362 - 0.5837
rimJ SPA1684 ribosomal-protein-alanine acetyltransferasechromosome CDS1745785 585 - 0.51453
rimK SPA1887 ribosomal protein S6 modification proteinchromosome CDS1963491 903 - 0.563677
rimL SPA1258 ribosomal-protein-serine acetyltransferasechromosome CDS1329384 540 + 0.501852
rluA SPA0096 ribosomal large subunit pseudouridine synthase Achromosome CDS109221 660 - 0.571212
rluB SPA1613 putative ribosomal large subunit pseudouridine synthase Bchromosome CDS1675280 666 + 0.528529
rluC SPA1664 ribosomal large subunit pseudouridine synthase Cchromosome CDS1725783 960 - 0.542708
rmf SPA1784 ribosome modulation factor (protein E)chromosome CDS1840515 168 - 0.535714
rnG SPA3237 ribonuclease Gchromosome CDS3346371 1470 - 0.527891
rna SPA2117 ribonuclease I precursorchromosome CDS2201697 807 + 0.551425
rnd SPA1056 ribonuclease Dchromosome CDS1126999 1116 + 0.556452
rne SPA1666 ribonuclease Echromosome CDS1727316 3204 + 0.581149
rnpA SPA3684 ribonuclease Pchromosome CDS3827793 360 + 0.558333
rph SPA3586 ribonuclease PHchromosome CDS3715338 717 - 0.546722
rplA SPA3988 50S ribosomal protein L1chromosome CDS4137166 705 + 0.534752
rplB SPA3303 50S ribosomal protein L2chromosome CDS3400190 822 - 0.532847
rplC SPA3306 50S ribosomal protein L3chromosome CDS3401944 630 - 0.512698
rplD SPA3305 50S ribosomal protein L4chromosome CDS3401328 606 - 0.533003
rplE SPA3294 50S ribosomal protein L5chromosome CDS3396547 540 - 0.494444
rplF SPA3291 50S ribosomal protein L6chromosome CDS3395255 534 - 0.516854
rplI SPA4211 50S ribosomal protein L9chromosome CDS4380534 450 + 0.506667
rplJ SPA3989 50S ribosomal protein L10chromosome CDS4138286 498 + 0.52008
rplK SPA3987 50S ribosomal protein L11chromosome CDS4136734 429 + 0.524476
rplL SPA3990 50S ribosomal protein L7/L12chromosome CDS4138850 366 + 0.461749
rplM SPA3212 50S ribosomal protein L13chromosome CDS3319374 429 - 0.512821
rplN SPA3296 50S ribosomal protein L14chromosome CDS3397426 372 - 0.5
rplO SPA3287 50S ribosomal protein L15chromosome CDS3393753 435 - 0.544828
rplP SPA3299 50S ribosomal protein L16chromosome CDS3398406 411 - 0.523114
rplQ SPA3280 50S ribosomal protein L17chromosome CDS3389264 384 - 0.544271
rplR SPA3290 50S ribosomal protein L18chromosome CDS3394892 354 - 0.528249
rplS SPA2532 50S ribosomal protein L19chromosome CDS2632718 348 - 0.482759
rplT SPA1507 50S ribosomal protein L20chromosome CDS1583464 357 - 0.498599
rplU SPA3171 50S ribosomal protein L21chromosome CDS3280245 312 - 0.487179
rplV SPA3301 50S ribosomal protein L22chromosome CDS3399548 333 - 0.501502
rplW SPA3304 50S ribosomal protein L23chromosome CDS3401029 303 - 0.491749
rplX SPA3295 50S ribosomal protein L24chromosome CDS3397101 315 - 0.457143
rplY SPA0626 50S ribosomal protein L25chromosome CDS704403 285 - 0.512281
rpmA SPA3170 50S ribosomal protein L27chromosome CDS3279968 258 - 0.492248
rpmB SPA3580 50S ribosomal protein L28chromosome CDS3710885 237 - 0.518987
rpmC SPA3298 50S ribosomal protein L29chromosome CDS3398215 192 - 0.53125
rpmD SPA3288 50S ribosomal protein L30chromosome CDS3394191 180 - 0.511111
rpmE SPA3939 50S ribosomal protein L31chromosome CDS4083808 213 + 0.488263
rpmE2 SPA2253 50S ribosomal protein L31chromosome CDS2346846 261 - 0.440613
rpmF SPA1660 50S ribosomal protein L32chromosome CDS1724172 174 - 0.528736
rpmG SPA3579 50S ribosomal protein L33chromosome CDS3710697 168 - 0.404762
rpmH SPA3683 50S ribosomal protein L34chromosome CDS3827636 141 + 0.524823
rpmI SPA1508 50S ribosomal protein L35chromosome CDS1583871 198 - 0.484848
rpmJ SPA3285 50S ribosomal protein L36chromosome CDS3392266 117 - 0.478632
rpmJ2 SPA2252 50S ribosomal protein L36chromosome CDS2346700 141 - 0.432624
rpsA SPA1817 30S ribosomal protein S1chromosome CDS1885026 1674 - 0.510753
rpsB SPA0223 30S ribosomal protein S2chromosome CDS258445 726 + 0.511019
rpsC SPA3300 30S ribosomal protein S3chromosome CDS3398829 702 - 0.511396
rpsD SPA3282 30S ribosomal protein S4chromosome CDS3390703 621 - 0.512077
rpsE SPA3289 30S ribosomal protein S5chromosome CDS3394374 504 - 0.505952
rpsF SPA4208 30S ribosomal protein S6chromosome CDS4379544 396 + 0.532828
rpsG SPA3313 30S ribosomal protein S7chromosome CDS3408156 471 - 0.498938
rpsH SPA3292 30S ribosomal protein S8chromosome CDS3395801 393 - 0.503817
rpsI SPA3211 30S ribosomal protein S9chromosome CDS3318966 393 - 0.529262
rpsJ SPA3307 30S ribosomal protein S10chromosome CDS3402606 312 - 0.548077
rpsK SPA3283 30S ribosomal protein S11chromosome CDS3391357 390 - 0.515385
rpsL SPA3314 30S ribosomal protein S12chromosome CDS3408722 375 - 0.528
rpsM SPA3284 30S ribosomal protein S13chromosome CDS3391763 357 - 0.526611
rpsN SPA3293 30S ribosomal protein S14chromosome CDS3396227 306 - 0.526144
rpsO SPA3151 30S ribosomal protein S15chromosome CDS3260379 270 - 0.5
rpsP SPA2535 30S ribosomal protein S16chromosome CDS2634485 249 - 0.522088
rpsQ SPA3297 30S ribosomal protein S17chromosome CDS3397961 255 - 0.478431
rpsR SPA4210 30S ribosomal protein S18chromosome CDS4380265 228 + 0.52193
rpsS SPA3302 30S ribosomal protein S19chromosome CDS3399895 279 - 0.491039
rpsT SPA0044 30S ribosomal protein S20chromosome CDS52246 264 - 0.465909
rpsU SPA3077 30S ribosomal protein S21chromosome CDS3184513 216 + 0.518519
rsmC SPA4370 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4543707 1029 - 0.569485
rumA SPA2822 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2924168 1296 - 0.544753
selB SPA3533 selenocysteine-specific elongation factorchromosome CDS3658853 1851 - 0.570502
serS SPA1835 seryl-tRNA synthetasechromosome CDS1907405 1293 - 0.54215
sfhB SPA2523 ftsH suppressor protein SfhBchromosome CDS2623392 981 - 0.533129
smpA SPA2544 small protein Achromosome CDS2642914 297 + 0.50505
speG SPA1353 spermidine N1-acetyltransferasechromosome CDS1433544 561 + 0.483066
srmB SPA0275 ATP-dependent RNA helicase SrmBchromosome CDS310922 1335 - 0.54382
stbD SPA2382 putative fimbrial proteinchromosome CDS2483728 1326 + 0.522624
sun SPA3275 sun proteinchromosome CDS3384847 1290 + 0.541085
tgt SPA2318 queuine tRNA-ribosyltransferasechromosome CDS2411099 1128 - 0.524823
thrS SPA1511 threonyl-tRNA synthetasechromosome CDS1584710 1929 - 0.50337
trmA SPA3967 tRNA (uracil-5-)-methyltransferasechromosome CDS4120386 1101 - 0.520436
trmD SPA2533 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2633106 768 - 0.541667
trmH SPA3595 tRNA (guanosine-2'-O)-methyltransferasechromosome CDS3724845 690 + 0.53913
trmU SPA1616 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1676798 1107 + 0.544715
trpS SPA3346 tryptophanyl-tRNA synthetasechromosome CDS3441961 1005 - 0.515423
truA SPA0496 tRNA pseudouridine synthase Achromosome CDS566635 813 + 0.557196
truB SPA3152 tRNA pseudouridine synthase Bchromosome CDS3260799 945 - 0.559788
tsf SPA0224 elongation factor Tschromosome CDS259428 852 + 0.523474
tuf SPA3984 elongation factor Tuchromosome CDS4134232 1185 + 0.538397
tuf SPA3311 elongation factor Tuchromosome CDS3404689 1185 - 0.540928
tyrS SPA1404 tyrosyl-tRNA synthetasechromosome CDS1487536 1275 - 0.527843
valS SPA4276 valyl-tRNA synthetasechromosome CDS4447086 2856 - 0.567227
yadB SPA0191 glutamyl-tRNA synthetasechromosome CDS219659 897 - 0.578595
yaeJ SPA0247 hypothetical proteinchromosome CDS285378 423 + 0.555556
ybfE SPA2046 hypothetical proteinchromosome CDS2132442 294 + 0.527211
ybjF SPA1880 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1956714 1128 - 0.564716
ychF SPA1089 putative ATP/GTP-binding proteinchromosome CDS1159216 1092 - 0.53022
yciH SPA1170 hypothetical proteinchromosome CDS1241754 327 + 0.461774
yciL SPA1157 putative pseudouridine synthasechromosome CDS1225663 876 + 0.565068
yciO SPA1156 hypothetical proteinchromosome CDS1224942 621 + 0.52818
yeiP SPA0640 elongation factor Pchromosome CDS719823 804 - 0.513682
yejD SPA0628 ribosomal small subunit pseudouridine synthasechromosome CDS706724 696 + 0.54454
yfbG SPA0564 hypothetical proteinchromosome CDS637216 1983 - 0.542108
yfcB SPA0479 hypothetical proteinchromosome CDS551319 933 + 0.529475
yfhC SPA0297 hypothetical proteinchromosome CDS332122 552 + 0.570652
yfiA SPA2525 putative sigma(54) modulation proteinchromosome CDS2625513 339 + 0.471976
yfiF SPA0270 putative RNA methyltransferasechromosome CDS306709 1038 + 0.572254
yfjA SPA2534 16S rRNA-processing proteinchromosome CDS2633918 549 - 0.497268
ygjO SPA3088 hypothetical proteinchromosome CDS3198812 1137 - 0.534741
yhbH SPA3188 probable sigma(54) modulation proteinchromosome CDS3293333 288 + 0.458333
yhbY SPA3165 hypothetical proteinchromosome CDS3274909 333 + 0.471471
yhdG SPA3251 hypothetical proteinchromosome CDS3361914 846 + 0.536643
yhjN SPA3474 putative polysaccharide biosynthesis protein subunit Bchromosome CDS3591952 2301 - 0.569752
yibK SPA3547 putative RNA-methyltransferasechromosome CDS3677537 474 + 0.563291
yihZ SPA3869 D-tyrosyl-tRNA deacylasechromosome CDS4016262 438 + 0.561644
yjbC SPA4031 putative pseudouridine synthasechromosome CDS4187562 870 + 0.502299
yjbN SPA4060 hypothetical proteinchromosome CDS4218732 999 + 0.552553
yjeA SPA4161 lysyl-tRNA synthetasechromosome CDS4335834 978 + 0.537832
yjfH SPA4186 probable tRNA/rRNA methyltransferasechromosome CDS4363423 732 + 0.569672
yjgF SPA4259 hypothetical proteinchromosome CDS4433107 387 - 0.54522
yliG SPA1903 hypothetical proteinchromosome CDS1978195 1326 + 0.539216
yoaB SPA1051 hypothetical proteinchromosome CDS1121232 345 - 0.510145
yohI SPA0677 hypothetical proteinchromosome CDS759599 939 + 0.571885
yqcB SPA2828 putative RNA pseudouridylate synthasechromosome CDS2933181 783 - 0.58493
yrdC SPA3269 hypothetical proteinchromosome CDS3380476 573 - 0.539267
 
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t3215 hypothetical proteinchromosome CDS3307460 333 + 0.471471
NA t1055 hypothetical proteinchromosome CDS1138628 345 - 0.510145
NA t3413 possible lipoproteinchromosome CDS3509408 807 - 0.428748
NA t0564 hypothetical proteinchromosome CDS639046 1983 - 0.540091
NA t3238 probable sigma(54) modulation proteinchromosome CDS3325887 288 + 0.461806
NA t3198 ATP-dependent RNA helicasechromosome CDS3287491 1941 - 0.573931
NA t1467 putative isomerasechromosome CDS1511427 1080 + 0.386111
NA t1619 hypothetical proteinchromosome CDS1675736 327 - 0.461774
NA t2424 hypothetical proteinchromosome CDS2497128 285 - 0.410526
NA t4158 hypothetical proteinchromosome CDS4302075 339 - 0.572271
NA t0479 hypothetical proteinchromosome CDS553098 933 + 0.530547
NA t1633 hypothetical proteinchromosome CDS1692255 621 - 0.52657
NA t3932 putative regulatory proteinchromosome CDS4070233 381 - 0.435696
NA t1632 putative pseudouridine synthasechromosome CDS1691279 876 - 0.567352
NA t0311 putative RNA methyltransferasechromosome CDS356421 732 + 0.571038
NA t1092 putative ATP/GTP-binding proteinchromosome CDS1176621 1092 - 0.527473
NA t0739 hypothetical proteinchromosome CDS819259 885 - 0.500565
NA t4289 hypothetical proteinchromosome CDS4455212 360 + 0.469444
NA t0081 putative lipoproteinchromosome CDS93416 231 + 0.484848
NA t4269 hypothetical proteinchromosome CDS4434572 420 + 0.497619
alaS t2728 alanyl-tRNA synthetasechromosome CDS2810127 2631 - 0.551121
ansA t1173 cytoplasmic asparaginase Ichromosome CDS1239676 1017 - 0.526057
ansB t3018 L-asparaginasechromosome CDS3106660 1047 - 0.527221
argS t0968 arginyl-tRNA synthetasechromosome CDS1057191 1734 - 0.551326
asnS t1934 asparaginyl-tRNA synthetasechromosome CDS1977682 1401 + 0.551035
aspS t0976 aspartyl-tRNA synthetasechromosome CDS1064639 1773 + 0.564016
cca t3124 tRNA nucleotidyltransferasechromosome CDS3212217 1242 + 0.589372
cysS t2324 cysteinyl-tRNA synthetasechromosome CDS2387374 1386 - 0.549062
def t4098 peptide deformylasechromosome CDS4236705 510 - 0.515686
efp t4386 elongation factor Pchromosome CDS4539006 567 + 0.514991
fmt t4097 methionyl-tRNA formyltransferasechromosome CDS4235742 948 - 0.547468
frr t0220 ribosome releasing factorchromosome CDS254023 558 + 0.510753
ftsJ t3214 cell division proteinchromosome CDS3306746 627 - 0.515152
fusA t4059 elongation factor EF-2chromosome CDS4212478 2115 + 0.51773
glnS t2189 glutaminyl-tRNA synthetasechromosome CDS2256003 1668 - 0.53717
gltX t0442 glutamyl-tRNA synthetasechromosome CDS512524 1416 + 0.55226
glyQ t3863 glycyl-tRNA synthetase alpha subunitchromosome CDS3990831 912 + 0.552632
glyS t3864 glycyl-tRNA synthetase beta subunitchromosome CDS3991752 2070 + 0.552657
gshB t3007 glutathione synthetasechromosome CDS3098120 948 + 0.541139
hemK t1101 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1186199 834 + 0.58753
hisS t0334 histidyl-tRNA synthetasechromosome CDS384454 1275 + 0.559216
hslR t4009 heat shock proteinchromosome CDS4161778 402 - 0.567164
ileS t0048 isoleucyl-tRNA synthetasechromosome CDS53852 2835 + 0.548501
infA t1980 translation initiation factor IF-1chromosome CDS2039975 219 + 0.488584
infB t3204 translation initiation factor IF-2chromosome CDS3294916 2679 - 0.553565
infC t1214 translation initiation factor IF-3chromosome CDS1282577 543 + 0.475138
ksgA t0093 dimethyladenosine transferasechromosome CDS102458 822 - 0.526764
lasT t4639 putative RNA methyltransferasechromosome CDS4791251 687 + 0.534207
leuS t2219 leucyl-tRNA synthetasechromosome CDS2284615 2583 + 0.558266
ligT t0196 2'-5' RNA ligasechromosome CDS222150 531 - 0.613936
lysS t2958 lysyl-tRNA synthetasechromosome CDS3047236 1518 - 0.539526
map t0216 methionine aminopeptidasechromosome CDS249928 795 - 0.522013
miaA t4411 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4562793 951 + 0.540484
miaB t2203 MiaB proteinchromosome CDS2268374 1467 + 0.540559
miaE t4505 tRNA hydroxylasechromosome CDS4652359 765 + 0.550327
pcnB t0192 poly(A) polymerasechromosome CDS218273 1419 - 0.562368
pheS t1218 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1284121 984 + 0.536585
pilK t4253 hypothetical proteinchromosome CDS4421237 468 + 0.540598
pnp t3200 polynucleotide phosphorylasechromosome CDS3290553 2136 - 0.56133
prfA t1100 peptide chain release factor 1chromosome CDS1185117 1083 + 0.579871
prfB t2959 peptide chain release factor 2chromosome CDS3048763 1098 - 0.540073
prfC t4603 peptide chain release factor 3chromosome CDS4753377 1590 + 0.543396
prfH t2535 peptide chain release factor 2chromosome CDS2610992 615 - 0.556098
prmA t3298 ribosomal protein L11 methyltransferasechromosome CDS3392826 882 + 0.556689
proS t0245 prolyl-tRNA synthetasechromosome CDS280756 1719 - 0.543339
pth t1093 peptidyl-tRNA hydrolasechromosome CDS1177829 609 - 0.520525
queA t2459 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS2528271 1065 - 0.556808
rbfA t3203 ribosome-binding factor Achromosome CDS3294294 402 - 0.534826
relE t4484 hypothetical proteinchromosome CDS4630646 285 + 0.470175
rfbF t0780 glucose-1-phosphate cytidylyltransferasechromosome CDS871817 774 + 0.435401
rhlB t3382 ATP-dependent RNA helicasechromosome CDS3482595 1266 + 0.546604
rhlE t2068 putative ATP-dependent RNA helicase rhlEchromosome CDS2130325 1368 - 0.584795
rimJ t1753 ribosomal-protein-alanine acetyltransferasechromosome CDS1817818 585 - 0.512821
rimK t2021 ribosomal protein S6 modification proteinchromosome CDS2079201 903 - 0.563677
rimL t1520 ribosomal-protein-serine acetyltransferasechromosome CDS1576530 540 - 0.511111
rluA t0098 ribosomal large subunit pseudouridine synthase Achromosome CDS109120 660 - 0.575758
rluB t1683 putative ribosomal large subunit pseudouridine synthase Bchromosome CDS1747485 666 + 0.528529
rluC t1732 ribosomal large subunit pseudouridine synthase Cchromosome CDS1797105 960 - 0.544792
rmf t1854 ribosome modulation factorchromosome CDS1913967 168 - 0.541667
rnG t3285 ribonuclease Gchromosome CDS3378943 1470 - 0.529252
rna t2250 ribonuclease I precursorchromosome CDS2315477 807 + 0.551425
rnd t1060 ribonuclease Dchromosome CDS1144382 1128 + 0.549645
rne t1734 ribonuclease Echromosome CDS1798638 3204 + 0.581461
rnpA t3679 ribonuclease Pchromosome CDS3789441 360 - 0.558333
rph t3784 ribonuclease PHchromosome CDS3906401 717 + 0.546722
rplA t3477 50S ribosomal protein L1chromosome CDS3572627 705 - 0.533333
rplB t4068 50S ribosomal protein L2chromosome CDS4219526 822 + 0.532847
rplC t4065 50S ribosomal protein L3chromosome CDS4217964 630 + 0.515873
rplD t4066 50S ribosomal protein L4chromosome CDS4218604 606 + 0.533003
rplE t4077 50S ribosomal protein L5chromosome CDS4223451 540 + 0.494444
rplF t4080 50S ribosomal protein L6chromosome CDS4224749 534 + 0.516854
rplI t4445 50S ribosomal protein L9chromosome CDS4589950 450 + 0.508889
rplJ t3476 50S ribosomal protein L10chromosome CDS3571714 498 - 0.52008
rplK t3478 50S ribosomal protein L11chromosome CDS3573335 429 - 0.524476
rplL t3475 50S ribosomal protein L7/L12chromosome CDS3571282 366 - 0.461749
rplM t3261 50S ribosomal protein L13chromosome CDS3351919 429 - 0.512821
rplN t4075 50S ribosomal protein L14chromosome CDS4222740 372 + 0.5
rplO t4084 50S ribosomal protein L15chromosome CDS4226350 435 + 0.544828
rplP t4072 50S ribosomal protein L16chromosome CDS4221721 411 + 0.523114
rplQ t4091 50S ribosomal protein L17chromosome CDS4230890 384 + 0.544271
rplR t4081 50S ribosomal protein L18chromosome CDS4225292 354 + 0.528249
rplS t2628 50S ribosomal protein L19chromosome CDS2705977 348 - 0.482759
rplT t1216 50S ribosomal protein L20chromosome CDS1283463 357 + 0.498599
rplU t3221 50S ribosomal protein L21chromosome CDS3312796 312 - 0.490385
rplV t4070 50S ribosomal protein L22chromosome CDS4220657 333 + 0.501502
rplW t4067 50S ribosomal protein L23chromosome CDS4219206 303 + 0.491749
rplX t4076 50S ribosomal protein L24chromosome CDS4223122 315 + 0.457143
rplY t0630 50S ribosomal protein L25chromosome CDS711610 285 - 0.512281
rpmA t3220 50S ribosomal protein L27chromosome CDS3312519 258 - 0.496124
rpmB t3790 50S ribosomal protein L28chromosome CDS3911334 237 + 0.518987
rpmC t4073 50S ribosomal protein L29chromosome CDS4222131 192 + 0.53125
rpmD t4083 50S ribosomal protein L30chromosome CDS4226167 180 + 0.511111
rpmE t2391 50S ribosomal protein L31chromosome CDS2461628 261 - 0.43295
rpmE t3522 50S ribosomal protein L31chromosome CDS3625098 213 - 0.488263
rpmF t1729 50S ribosomal protein L32chromosome CDS1795494 174 - 0.528736
rpmG t3791 50S ribosomal protein L33chromosome CDS3911591 168 + 0.404762
rpmH t3680 50S ribosomal protein L34chromosome CDS3789817 141 - 0.524823
rpmI t1215 50S ribosomal protein L35chromosome CDS1283215 198 + 0.484848
rpmJ t2390 50S ribosomal protein L36chromosome CDS2461482 141 - 0.432624
rpmJ t4086 50S ribosomal protein L36chromosome CDS4228155 117 + 0.478632
rpsA t1953 30S ribosomal protein S1chromosome CDS2003102 1674 - 0.510753
rpsB t0217 30S ribosomal protein S2chromosome CDS251172 726 + 0.511019
rpsC t4071 30S ribosomal protein S3chromosome CDS4221007 702 + 0.511396
rpsD t4089 30S ribosomal protein S4chromosome CDS4229214 621 + 0.513688
rpsE t4082 30S ribosomal protein S5chromosome CDS4225660 504 + 0.505952
rpsF t4442 30S ribosomal protein S6chromosome CDS4588960 396 + 0.527778
rpsG t4058 30S ribosomal protein S7chromosome CDS4211911 471 + 0.498938
rpsH t4079 30S ribosomal protein S8chromosome CDS4224344 393 + 0.501272
rpsI t3260 30S ribosomal protein S9chromosome CDS3351511 393 - 0.531807
rpsJ t4064 30S ribosomal protein S10chromosome CDS4217620 312 + 0.544872
rpsK t4088 30S ribosomal protein S11chromosome CDS4228791 390 + 0.512821
rpsL t4057 30S ribosomal protein S12chromosome CDS4211441 375 + 0.528
rpsM t4087 30S ribosomal protein S13chromosome CDS4228418 357 + 0.521008
rpsN t4078 30S ribosomal protein S14chromosome CDS4224005 306 + 0.522876
rpsO t3201 30S ribosomal protein S15chromosome CDS3292930 270 - 0.5
rpsP t2631 30S ribosomal protein S16chromosome CDS2707744 249 - 0.522088
rpsQ t4074 30S ribosomal protein S17chromosome CDS4222322 255 + 0.478431
rpsR t4444 30S ribosomal protein S18chromosome CDS4589681 228 + 0.52193
rpsS t4069 30S ribosomal protein S19chromosome CDS4220364 279 + 0.491039
rpsT t0045 30S ribosomal protein S20chromosome CDS52277 264 - 0.465909
rpsU t3129 30S ribosomal protein S21chromosome CDS3217050 216 + 0.518519
rsmC t4599 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4750627 1029 - 0.5724
rumA t2866 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2946600 1296 - 0.542438
selB t3837 selenocysteine-specific elongation factorchromosome CDS3960899 1851 + 0.568882
serS t1971 seryl-tRNA synthetasechromosome CDS2025477 1293 - 0.53983
sfhB t2618 ftsH suppressor protein SfhBchromosome CDS2696651 981 - 0.534149
smpA t2639 small protein Achromosome CDS2716208 339 + 0.516224
speG t1423 spermidine N1-acetyltransferasechromosome CDS1469143 561 - 0.477718
srmB t0267 ATP-dependent RNA helicase SrmBchromosome CDS305010 1335 - 0.548315
sun t4096 sun proteinchromosome CDS4234401 1290 - 0.542636
tgt t2458 queuine tRNA-ribosyltransferasechromosome CDS2526947 1128 - 0.525709
thrS t1213 threonyl-tRNA synthetasechromosome CDS1280645 1929 + 0.50337
trmA t3496 tRNA (uracil-5-)-methyltransferasechromosome CDS3589125 1101 + 0.520436
trmD t2629 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2706365 768 - 0.540365
trmH t3775 tRNA (guanosine-2'-O)-methyltransferasechromosome CDS3896922 690 - 0.547826
trmU t1686 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1749003 1107 + 0.542005
trpS t4024 tryptophanyl-tRNA synthetasechromosome CDS4177991 1005 + 0.517413
trpS t4557 tryptophanyl-tRNA synthetasechromosome CDS4708764 1014 - 0.523669
truA t0496 tRNA pseudouridine synthase Achromosome CDS568418 813 + 0.558426
truB t3202 tRNA pseudouridine synthase Bchromosome CDS3293350 945 - 0.557672
tsf t0218 elongation factor Tschromosome CDS252155 852 + 0.529343
tuf t4060 elongation factor Tuchromosome CDS4214664 1185 + 0.53924
tuf t3481 elongation factor Tuchromosome CDS3575081 1185 - 0.537553
tyrS t1317 tyrosyl-tRNA synthetasechromosome CDS1377893 1275 + 0.527843
valS t4510 valyl-tRNA synthetasechromosome CDS4655990 2856 - 0.566176
yadB t0193 glutamyl-tRNA synthetasechromosome CDS219832 897 - 0.578595
yaeJ t0242 hypothetical proteinchromosome CDS278816 423 + 0.553191
ybfE t2180 hypothetical proteinchromosome CDS2246983 294 + 0.527211
ybjF t2014 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2072424 1128 - 0.562057
yeiP t0644 elongation factor Pchromosome CDS727031 573 - 0.511344
yejD t0632 ribosomal small subunit pseudouridine synthasechromosome CDS713931 696 + 0.54454
yfhC t0289 hypothetical proteinchromosome CDS326219 552 + 0.565217
yfiA t2620 putative sigma-54 modulation proteinchromosome CDS2698772 339 + 0.471976
yfiF t0262 putative RNA methyltransferasechromosome CDS300799 1038 + 0.570328
yfjA t2630 16S rRNA-processing proteinchromosome CDS2707177 549 - 0.499089
ygjO t3140 hypothetical proteinchromosome CDS3231351 1137 - 0.532982
yhdG t3299 hypothetical proteinchromosome CDS3394487 846 + 0.536643
yhjN t3899 putative polysaccharide biosynthesis protein subunit Bchromosome CDS4027231 2301 + 0.569318
yibK t3824 putative RNA methyltransferasechromosome CDS3944571 474 - 0.563291
yihZ t3593 D-tyrosyl-tRNA deacylasechromosome CDS3692343 438 - 0.554795
yjbC t4120 putative pseudouridine synthasechromosome CDS4262523 870 + 0.510345
yjbN t4149 hypothetical proteinchromosome CDS4293734 999 + 0.546547
yjeA t4396 lysyl-tRNA synthetasechromosome CDS4545490 978 + 0.541922
yjfH t4420 probable tRNA/rRNA methyltransferasechromosome CDS4572858 732 + 0.572404
yjgF t4493 hypothetical proteinchromosome CDS4642000 387 - 0.547804
yliG t2037 hypothetical proteinchromosome CDS2093889 1326 + 0.539216
yohI t0681 hypothetical proteinchromosome CDS766692 939 + 0.574015
yqcB t2873 putative RNA pseudouridylate synthasechromosome CDS2956978 783 - 0.582375
yrdC t4102 hypothetical proteinchromosome CDS4239489 573 + 0.541012
 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STY1910 putative ATP/GTP-binding proteinchromosome CDS1803420 1092 + 0.527473
NA STY3476 hypothetical proteinchromosome CDS3321965 333 + 0.471471
NA STY1952 hypothetical proteinchromosome CDS1842160 345 + 0.510145
NA STY1345 hypothetical proteinchromosome CDS1305121 327 + 0.461774
NA STY1027 hypothetical bacteriophage proteinchromosome CDS1019268 573 + 0.52356
NA STY3671 possible lipoproteinchromosome CDS3523748 807 - 0.429988
NA HCM1.28c hypothetical proteinpHCM1 CDS9558 312 - 0.442308
NA STY4572 hypothetical proteinchromosome CDS4449922 420 + 0.497619
NA STY2346 hypothetical proteinchromosome CDS2183793 885 + 0.500565
NA STY0478 hypothetical proteinchromosome CDS483689 285 + 0.410526
NA STY1330 hypothetical proteinchromosome CDS1288308 621 + 0.52657
NA STY4448 hypothetical proteinchromosome CDS4317425 339 - 0.572271
NA STY2617 hypothetical proteinchromosome CDS2450682 933 - 0.530547
NA STY1331 putative pseudouridine synthasechromosome CDS1289029 876 + 0.56621
NA STY2529 hypothetical proteinchromosome CDS2363684 1983 + 0.540595
NA STY3461 ATP-dependent RNA helicase (dead-box protein)chromosome CDS3301996 1941 - 0.573931
NA HCM2.0043 hypothetical proteinpHCM2 CDS32224 1056 + 0.453598
NA HCM2.0068c hypothetical proteinpHCM2 CDS57876 897 - 0.556299
NA STY3500 probable sigma(54) modulation proteinchromosome CDS3340392 288 + 0.461806
NA STY2791 putative RNA methyltransferasechromosome CDS2647697 732 - 0.571038
NA STY4220 putative regulatory proteinchromosome CDS4085586 381 - 0.435696
NA STY2048 putative bacteriophage proteinchromosome CDS1914557 558 - 0.471326
NA STY4595 hypothetical proteinchromosome CDS4471619 360 + 0.469444
NA STY1513 putative isomerasechromosome CDS1469419 1080 - 0.386111
NA STY0091 putative lipoproteinchromosome CDS93425 231 + 0.484848
NA HCM2.0128 hypothetical proteinpHCM2 CDS102462 306 + 0.486928
alaS STY2948 alanyl-tRNA synthetasechromosome CDS2824270 2631 - 0.551121
ansA STY1820 cytoplasmic asparaginase Ichromosome CDS1740439 1017 + 0.526057
ansB STY3259 L-asparaginasechromosome CDS3121165 1047 - 0.527221
argS STY2117 arginyl-tRNA synthetasechromosome CDS1967557 1734 + 0.551326
asnS STY1004 asparaginyl-tRNA synthetasechromosome CDS1001995 1401 - 0.551035
aspS STY2109 aspartyl-tRNA synthetasechromosome CDS1960070 1773 - 0.564016
cca STY3383 tRNA nucleotidyltransferasechromosome CDS3226722 1242 + 0.589372
cysS STY0585 cysteinyl-tRNA synthetasechromosome CDS592342 1386 + 0.549062
def STY4391 peptide deformylasechromosome CDS4252057 510 - 0.515686
efp STY4694 elongation factor Pchromosome CDS4556104 567 + 0.514991
fmt STY4390 methionyl-tRNA formyltransferasechromosome CDS4251094 948 - 0.547468
frr STY0242 ribosome releasing factorchromosome CDS254032 558 + 0.510753
ftsJ STY3475 cell division proteinchromosome CDS3321251 627 - 0.515152
fusA STY4352 elongation factor EF-2chromosome CDS4227831 2115 + 0.51773
glnS STY0724 glutaminyl-tRNA synthetasechromosome CDS723401 1668 + 0.53717
gltX STY2654 glutamyl-tRNA synthetasechromosome CDS2490763 1425 - 0.552982
glyQ STY4143 glycyl-tRNA synthetase alpha subunitchromosome CDS4006109 912 + 0.552632
glyS STY4144 glycyl-tRNA synthetase beta subunitchromosome CDS4007030 2070 + 0.552657
gshB STY3248 glutathione synthetasechromosome CDS3112625 948 + 0.541139
hemK STY1900 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1794100 834 - 0.58753
hisS STY2767 histidyl-tRNA synthetasechromosome CDS2619121 1275 - 0.559216
hslR STY4299 heat shock proteinchromosome CDS4177131 402 - 0.567164
ileS STY0055 isoleucyl-tRNA synthetasechromosome CDS53852 2835 + 0.548501
infA STY0951 translation initiation factor IF-1chromosome CDS940884 219 - 0.488584
infB STY3467 translation initiation factor IF-2chromosome CDS3309421 2679 - 0.553565
infC STY1777 translation initiation factor IF-3chromosome CDS1698011 543 - 0.475138
ksgA STY0105 dimethyladenosine transferasechromosome CDS102467 822 - 0.526764
lasT STY4949 putative RNA methyltransferasechromosome CDS4808327 687 + 0.534207
leuS STY0699 leucyl-tRNA synthetasechromosome CDS693874 2583 - 0.558266
ligT STY0213 2'-5' RNA ligasechromosome CDS222159 531 - 0.613936
lysS STY3196 lysyl-tRNA synthetasechromosome CDS3061741 1518 - 0.539526
map STY0238 methionine aminopeptidasechromosome CDS249937 795 - 0.522013
miaA STY4717 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4579891 951 + 0.541535
miaB STY0716 MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase))chromosome CDS711231 1467 - 0.540559
miaE STY4809 tRNA hydroxylasechromosome CDS4669470 765 + 0.550327
pcnB STY0209 poly(A) polymerasechromosome CDS218282 1419 - 0.562368
pheS STY1773 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1696026 984 - 0.536585
pilK STY4553 hypothetical proteinchromosome CDS4436587 468 + 0.540598
pnp STY3463 polynucleotide phosphorylasechromosome CDS3305058 2136 - 0.56133
prfA STY1901 peptide chain release factor 1chromosome CDS1794933 1083 - 0.579871
prfB STY3197 peptide chain release factor 2chromosome CDS3063268 1098 - 0.540073
prfC STY4910 peptide chain release factor 3chromosome CDS4770453 1590 + 0.543396
prfH STY0360 peptide chain release factor 2chromosome CDS369507 615 + 0.556098
prmA STY3563 ribosomal protein L11 methyltransferasechromosome CDS3407332 882 + 0.556689
proS STY0269 prolyl-tRNA synthetasechromosome CDS280765 1719 - 0.543921
pth STY1909 peptidyl-tRNA hydrolasechromosome CDS1802695 609 + 0.520525
queA STY0442 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS451765 1065 + 0.556808
rbfA STY3466 ribosome-binding factor Achromosome CDS3308799 402 - 0.534826
relE STY4789 hypothetical proteinchromosome CDS4647757 285 + 0.470175
rfbF STY2302 glucose-1-phosphate cytidylyltransferasechromosome CDS2131338 774 - 0.435401
rhlB STY3640 ATP-dependent RNA helicasechromosome CDS3496937 1266 + 0.546604
rhlE STY0855 putative ATP-dependent RNA helicase rhlEchromosome CDS849385 1368 + 0.584795
rimJ STY1205 ribosomal-protein-alanine acetyltransferasechromosome CDS1162781 585 + 0.512821
rimK STY0908 ribosomal protein S6 modification proteinchromosome CDS900974 903 + 0.563677
rimL STY1453 ribosomal-protein-serine acetyltransferasechromosome CDS1404112 540 + 0.511111
rluA STY0110 ribosomal large subunit pseudouridine synthase Achromosome CDS109129 660 - 0.575758
rluB STY1277 putative ribosomal large subunit pseudouridine synthase Bchromosome CDS1233033 666 - 0.528529
rluC STY1227 ribosomal large subunit pseudouridine synthase Cchromosome CDS1183119 960 + 0.544792
rmf STY1087 ribosome modulation factor (protein E)chromosome CDS1066679 168 + 0.541667
rnG STY3550 ribonuclease Gchromosome CDS3393449 1470 - 0.529252
rna STY0666 ribonuclease I precursorchromosome CDS664818 807 - 0.551425
rnd STY1947 ribonuclease Dchromosome CDS1835623 1128 - 0.549645
rne STY1226 ribonuclease Echromosome CDS1179342 3204 - 0.581461
rnpA STY3939 ribonuclease Pchromosome CDS3803950 360 - 0.558333
rph STY4060 ribonuclease PHchromosome CDS3920902 717 + 0.546722
rplA STY3735 50S ribosomal protein L1chromosome CDS3586968 705 - 0.533333
rplB STY4361 50S ribosomal protein L2chromosome CDS4234878 822 + 0.532847
rplC STY4358 50S ribosomal protein L3chromosome CDS4233316 630 + 0.515873
rplD STY4359 50S ribosomal protein L4chromosome CDS4233956 606 + 0.533003
rplE STY4370 50S ribosomal protein L5chromosome CDS4238803 540 + 0.494444
rplF STY4373 50S ribosomal protein L6chromosome CDS4240101 534 + 0.516854
rplI STY4750 50S ribosomal protein L9chromosome CDS4607047 450 + 0.508889
rplJ STY3734 50S ribosomal protein L10chromosome CDS3586055 498 - 0.52008
rplK STY3736 50S ribosomal protein L11chromosome CDS3587676 429 - 0.524476
rplL STY3733 50S ribosomal protein L7/L12chromosome CDS3585623 366 - 0.464481
rplM STY3525 50S ribosomal protein L13chromosome CDS3366425 429 - 0.512821
rplN STY4368 50S ribosomal protein L14chromosome CDS4238092 372 + 0.5
rplO STY4377 50S ribosomal protein L15chromosome CDS4241702 435 + 0.544828
rplP STY4365 50S ribosomal protein L16chromosome CDS4237073 411 + 0.523114
rplQ STY4384 50S ribosomal protein L17chromosome CDS4246242 384 + 0.544271
rplR STY4374 50S ribosomal protein L18chromosome CDS4240644 354 + 0.528249
rplS STY2860 50S ribosomal protein L19chromosome CDS2730753 348 - 0.482759
rplT STY1775 50S ribosomal protein L20chromosome CDS1697311 357 - 0.498599
rplU STY3483 50S ribosomal protein L21chromosome CDS3327301 312 - 0.490385
rplV STY4363 50S ribosomal protein L22chromosome CDS4236009 333 + 0.501502
rplW STY4360 50S ribosomal protein L23chromosome CDS4234558 303 + 0.491749
rplX STY4369 50S ribosomal protein L24chromosome CDS4238474 315 + 0.457143
rplY STY2461 50S ribosomal protein L25chromosome CDS2292820 285 + 0.512281
rpmA STY3482 50S ribosomal protein L27chromosome CDS3327024 258 - 0.496124
rpmB STY4066 50S ribosomal protein L28chromosome CDS3925835 237 + 0.518987
rpmC STY4366 50S ribosomal protein L29chromosome CDS4237483 192 + 0.53125
rpmD STY4376 50S ribosomal protein L30chromosome CDS4241519 180 + 0.511111
rpmE STY3774 50S ribosomal protein L31chromosome CDS3639438 213 - 0.488263
rpmE2 STY0512 50S ribosomal protein L31chromosome CDS519213 261 + 0.43295
rpmF STY1230 50S ribosomal protein L32chromosome CDS1185516 174 + 0.528736
rpmG STY4067 50S ribosomal protein L33chromosome CDS3926092 168 + 0.404762
rpmH STY3939A 50S ribosomal protein L34chromosome CDS3804326 141 - 0.524823
rpmI STY1776 50S ribosomal protein L35chromosome CDS1697718 198 - 0.484848
rpmJ STY4379 50S ribosomal protein L36chromosome CDS4243507 117 + 0.478632
rpmJ2 STY0513 50S ribosomal protein L36chromosome CDS519479 141 + 0.432624
rpsA STY0981 30S ribosomal protein S1chromosome CDS976302 1674 + 0.510753
rpsB STY0239 30S ribosomal protein S2chromosome CDS251181 726 + 0.511019
rpsC STY4364 30S ribosomal protein S3chromosome CDS4236359 702 + 0.511396
rpsD STY4382 30S ribosomal protein S4chromosome CDS4244566 621 + 0.513688
rpsE STY4375 30S ribosomal protein S5chromosome CDS4241012 504 + 0.505952
rpsF STY4747 30S ribosomal protein S6chromosome CDS4606057 396 + 0.527778
rpsG STY4351 30S ribosomal protein S7chromosome CDS4227264 471 + 0.498938
rpsH STY4372 30S ribosomal protein S8chromosome CDS4239696 393 + 0.501272
rpsI STY3524 30S ribosomal protein S9chromosome CDS3366017 393 - 0.531807
rpsJ STY4357 30S ribosomal protein S10chromosome CDS4232972 312 + 0.544872
rpsK STY4381 30S ribosomal protein S11chromosome CDS4244143 390 + 0.512821
rpsL STY4350 30S ribosomal protein S12chromosome CDS4226794 375 + 0.528
rpsM STY4380 30S ribosomal protein S13chromosome CDS4243770 357 + 0.521008
rpsN STY4371 30S ribosomal protein S14chromosome CDS4239357 306 + 0.522876
rpsO STY3464 30S ribosomal protein S15chromosome CDS3307435 270 - 0.5
rpsP STY2863 30S ribosomal protein S16chromosome CDS2732520 249 - 0.522088
rpsQ STY4367 30S ribosomal protein S17chromosome CDS4237674 255 + 0.478431
rpsR STY4749 30S ribosomal protein S18chromosome CDS4606778 228 + 0.52193
rpsS STY4362 30S ribosomal protein S19chromosome CDS4235716 279 + 0.491039
rpsT STY0052 30S ribosomal protein S20chromosome CDS52277 264 - 0.465909
rpsU STY3388 30S ribosomal protein S21chromosome CDS3231555 216 + 0.518519
rsmC STY4906 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4767703 1029 - 0.5724
rumA STY3095 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2960705 1296 - 0.542438
selB STY4114 selenocysteine-specific elongation factorchromosome CDS3975401 1851 + 0.568882
serS STY0961 seryl-tRNA synthetasechromosome CDS954308 1293 + 0.53983
sfhB STY2851 ftsH suppressor protein SfhBchromosome CDS2721427 981 - 0.534149
smpA STY2871 small protein Achromosome CDS2740983 339 + 0.516224
speG STY1561 spermidine N1-acetyltransferasechromosome CDS1510962 561 + 0.477718
srmB STY2836 ATP-dependent RNA helicase SrmBchromosome CDS2698505 1335 + 0.548315
strA HCM1.223 streptomycin phosphotransferasepHCM1 CDS166864 804 + 0.562189
sun STY4389 sun proteinchromosome CDS4249753 1290 - 0.542636
tgt STY0443 queuine tRNA-ribosyltransferasechromosome CDS453026 1128 + 0.525709
thrS STY1778 threonyl-tRNA synthetasechromosome CDS1698557 1929 - 0.50337
trmA STY3745 tRNA (uracil-5-)-methyltransferasechromosome CDS3603465 1101 + 0.520436
trmD STY2861 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2731141 768 - 0.540365
trmH STY4049 tRNA (guanosine-2'-O)-methyltransferasechromosome CDS3911423 690 - 0.547826
trmU STY1274 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1231074 1107 - 0.542005
trpS STY4315 tryptophanyl-tRNA synthetasechromosome CDS4193344 1005 + 0.517413
trpS2 STY4863 tryptophanyl-tRNA synthetasechromosome CDS4725840 1014 - 0.523669
truA STY2599 tRNA pseudouridine synthase Achromosome CDS2435482 813 - 0.558426
truB STY3465 tRNA pseudouridine synthase Bchromosome CDS3307855 945 - 0.557672
tsf STY0240 elongation factor Tschromosome CDS252164 852 + 0.529343
tuf STY3739 elongation factor Tuchromosome CDS3589422 1185 - 0.537553
tuf STY4353 elongation factor Tuchromosome CDS4230017 1185 + 0.53924
tyrS STY1673 tyrosyl-tRNA synthetasechromosome CDS1601969 1275 - 0.527843
valS STY4814 valyl-tRNA synthetasechromosome CDS4673101 2856 - 0.566176
yadB STY0210 glutamyl-tRNA synthetasechromosome CDS219841 897 - 0.578595
yaeJ STY0265 hypothetical proteinchromosome CDS278825 423 + 0.553191
ybfE STY0733 hypothetical proteinchromosome CDS733795 294 - 0.527211
ybjF STY0915 23S rRNA (uracil-5-)-methyltransferasechromosome CDS907526 1128 + 0.562057
yeiP STY2447 chromosome pseudo2277111 573 + 0.511344
yeiP STY2447 chromosome pseudo2277111 573 + 0.511344
yejD STY2459 ribosomal small subunit pseudouridine synthasechromosome CDS2290088 696 - 0.54454
yfhC STY2814 hypothetical proteinchromosome CDS2678079 552 - 0.565217
yfiA STY2853 putative sigma(54) modulation proteinchromosome CDS2723548 339 + 0.471976
yfiF STY2841 putative RNA methyltransferasechromosome CDS2703013 1038 - 0.570328
yfjA STY2862 16S rRNA-processing proteinchromosome CDS2731953 549 - 0.499089
ygjO STY3400 hypothetical proteinchromosome CDS3245856 1137 - 0.532982
yhdG STY3564 hypothetical proteinchromosome CDS3408993 846 + 0.536643
yhjN STY4182 putative polysaccharide biosynthesis protein subunit Bchromosome CDS4042585 2301 + 0.569318
yibK STY4101 putative RNA-methyltransferasechromosome CDS3959072 474 - 0.563291
yihZ STY3850 D-tyrosyl-tRNA deacylasechromosome CDS3706680 438 - 0.554795
yjbC STY4410 putative pseudouridine synthasechromosome CDS4277873 870 + 0.510345
yjbN STY4439 hypothetical proteinchromosome CDS4309084 999 + 0.546547
yjeA STY4704 lysyl-tRNA synthetasechromosome CDS4562588 978 + 0.541922
yjfH STY4726 probable tRNA/rRNA methyltransferasechromosome CDS4589954 732 + 0.572404
yjgF STY4798 hypothetical proteinchromosome CDS4659111 387 - 0.547804
yliG STY0891 hypothetical proteinchromosome CDS885863 1326 - 0.539216
yohI STY2404 hypothetical proteinchromosome CDS2236307 939 - 0.574015
yqcB STY3103 putative RNA pseudouridylate synthasechromosome CDS2971083 783 - 0.582375
yrdC STY4395 hypothetical proteinchromosome CDS4254841 573 + 0.541012
 
Salmonella typhimurium LT2, SGSC1412
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
traJ PSLT075 regulatory proteinpSLT CDS61587 687 + 0.349345
 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_1279 hypothetical proteinchromosome CDS1267877 393 - 0.51145
NA SBO_2292 putative transformylasechromosome CDS2280209 1983 + 0.511346
NA SBO_2556 putative ATP synthase beta subunitchromosome CDS2557791 741 - 0.551957
alaS SBO_2821 alanyl-tRNA synthetasechromosome CDS2830008 2631 + 0.536298
ansA SBO_1320 cytoplasmic L-asparaginase Ichromosome CDS1303836 1017 - 0.507375
ansB SBO_3033 periplasmic L-asparaginase IIchromosome CDS3032813 1047 + 0.52531
argS SBO_1124 arginine tRNA synthetasechromosome CDS1127799 1734 - 0.528835
asnS SBO_2221 asparagine tRNA synthetasechromosome CDS2205753 1401 - 0.528194
aspS SBO_1189 aspartate tRNA synthetasechromosome CDS1183469 1773 - 0.539199
cafA SBO_3141 bundles of cytoplasmic filamentschromosome CDS3143606 1488 + 0.521505
cca SBO_2912 tRNA nucleotidyl transferasechromosome CDS2916537 1239 + 0.561743
cysS SBO_0417 cysteine tRNA synthetasechromosome CDS432584 1320 - 0.543182
dbpA SBO_1718 ATP-dependent RNA helicasechromosome CDS1698741 1374 - 0.516739
deaD SBO_3220 inducible ATP-independent RNA helicasechromosome CDS3227057 1941 + 0.552808
def SBO_3280 peptide deformylasechromosome CDS3281972 510 + 0.462745
efp SBO_4309 elongation factor Pchromosome CDS4357832 567 - 0.499118
fmt SBO_3281 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferasechromosome CDS3282496 948 + 0.524262
frr SBO_0160 ribosome releasing factorchromosome CDS178890 558 + 0.507168
ftsJ SBO_3203 cell division proteinchromosome CDS3207327 630 + 0.501587
fusA SBO_3321 GTP-binding protein chain elongation factor EF-Gchromosome CDS3307350 2115 - 0.506383
glnS SBO_0542 glutamine tRNA synthetasechromosome CDS556975 1665 + 0.530931
gltX SBO_2426 glutamate tRNA synthetase, catalytic subunitchromosome CDS2421277 1416 - 0.528955
glyQ SBO_3565 glycine tRNA synthetase, alpha subunitchromosome CDS3571432 912 - 0.559211
glyS SBO_3564 glycine tRNA synthetase, beta subunitchromosome CDS3569353 2070 - 0.55314
gshB SBO_3043 glutathione synthetasechromosome CDS3040705 951 - 0.537329
hemK SBO_1855 possible protoporphyrinogen oxidasechromosome CDS1835732 834 - 0.551559
hisS SBO_2538 histidine tRNA synthetasechromosome CDS2535023 1275 - 0.541961
ileS SBO_0025 isoleucine tRNA synthetasechromosome CDS22483 2817 + 0.55733
infA SBO_0817 protein chain initiation factor IF-1chromosome CDS829029 219 - 0.484018
infB SBO_3214 protein chain initiation factor IF-2chromosome CDS3218977 2649 + 0.534541
infC SBO_1376 protein chain initiation factor IF-3chromosome CDS1352973 435 + 0.48046
iucB SBO_4338 siderophore biosynthesis proteinchromosome CDS4388327 948 + 0.563291
ksgA SBO_0040 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferasechromosome CDS40671 822 - 0.532847
lasT SBO_4466 hypothetical proteinchromosome CDS4519113 687 + 0.490539
leuS SBO_0506 leucine tRNA synthetasechromosome CDS522612 2583 - 0.532714
lysS SBO_3102 lysine tRNA synthetase, constitutivechromosome CDS3103299 1518 + 0.525692
map SBO_0156 methionine aminopeptidasechromosome CDS174730 795 - 0.510692
miaA SBO_4285 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4334078 951 - 0.535226
ospD1 SBO_P031 OspD1pSB4_227 CDS21177 678 + 0.359882
pcnB SBO_0132 poly(A) polymerase Ichromosome CDS143948 1419 - 0.556025
pheS SBO_1379 phenylalanine tRNA synthetase, alpha-subunitchromosome CDS1354561 984 + 0.54065
pnp SBO_3218 polynucleotide phosphorylasechromosome CDS3223731 2205 + 0.534694
prfA SBO_1856 peptide chain release factor RF-1chromosome CDS1836565 1083 - 0.530933
prfB SBO_3101 peptide chain release factor RF-2chromosome CDS3102408 882 + 0.53288
prfC SBO_4436 peptide chain release factor RF-3chromosome CDS4486893 1590 + 0.532704
prfH SBO_0242 probable peptide chain release factorchromosome CDS257943 501 + 0.542914
prmA SBO_3253 methylase for 50S ribosomal subunit protein L11chromosome CDS3257303 882 + 0.543084
proS SBO_0183 proline tRNA synthetasechromosome CDS203036 1719 - 0.544503
pth SBO_1863 peptidyl-tRNA hydrolasechromosome CDS1844146 585 + 0.497436
queA SBO_0299 probably S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS313982 1071 + 0.539683
rbfA SBO_3215 ribosome-binding factor Achromosome CDS3221789 402 + 0.529851
rhlB SBO_3790 putative ATP-dependent RNA helicasechromosome CDS3813851 1266 - 0.522117
rhlE SBO_0685 putative ATP-dependent RNA helicasechromosome CDS697661 1365 + 0.564835
rimJ SBO_1998 RimJchromosome CDS1970546 585 - 0.494017
rimK SBO_0786 ribosomal protein S6 modification proteinchromosome CDS794796 903 + 0.55814
rimL SBO_1660 acetyl transferasechromosome CDS1642604 537 - 0.441341
rmf SBO_2278 ribosome modulation factorchromosome CDS2264439 168 - 0.541667
rna SBO_0476 RNase Ichromosome CDS494642 807 - 0.513011
rnd SBO_1284 RNase Dchromosome CDS1273596 1128 + 0.539894
rne SBO_1980 RNase Echromosome CDS1952408 3186 + 0.557753
rnpA SBO_3673 RnpAchromosome CDS3688070 360 - 0.558333
rph SBO_3645 RNase PHchromosome CDS3661432 717 - 0.570432
rplA SBO_4004 50S ribosomal subunit protein L1chromosome CDS4037302 705 + 0.516312
rplB SBO_3311 50S ribosomal subunit protein L2chromosome CDS3298825 822 - 0.526764
rplC SBO_3314 50S ribosomal subunit protein L3chromosome CDS3300579 630 - 0.514286
rplD SBO_3313 50S ribosomal subunit protein L4chromosome CDS3299963 606 - 0.529703
rplE SBO_3302 50S ribosomal subunit protein L5chromosome CDS3295181 540 - 0.496296
rplF SBO_3299 50S ribosomal subunit protein L6chromosome CDS3293889 534 - 0.522472
rplI SBO_4251 50S ribosomal subunit protein L9chromosome CDS4306456 450 - 0.495556
rplJ SBO_4005 50S ribosomal subunit protein L10chromosome CDS4038419 498 + 0.524096
rplK SBO_4003 50S ribosomal subunit protein L11chromosome CDS4036870 429 + 0.524476
rplL SBO_4006 50S ribosomal subunit protein L7/L12chromosome CDS4038983 366 + 0.461749
rplM SBO_3158 50S ribosomal subunit protein L13chromosome CDS3163824 429 + 0.503497
rplN SBO_3304 50S ribosomal subunit protein L14chromosome CDS3296060 372 - 0.510753
rplO SBO_3295 50S ribosomal subunit protein L15chromosome CDS3292387 435 - 0.535632
rplP SBO_3307 50S ribosomal subunit protein L16chromosome CDS3297041 411 - 0.518248
rplQ SBO_3288 50S ribosomal subunit protein L17chromosome CDS3287898 384 - 0.536458
rplR SBO_3298 50S ribosomal subunit protein L18chromosome CDS3293526 354 - 0.536723
rplS SBO_2742 50S ribosomal subunit protein L19chromosome CDS2753065 348 - 0.482759
rplT SBO_1378 50S ribosomal subunit protein L20chromosome CDS1353754 333 + 0.483483
rplU SBO_3196 50S ribosomal subunit protein L21chromosome CDS3201685 312 + 0.483974
rplV SBO_3309 50S ribosomal subunit protein L22chromosome CDS3298183 333 - 0.495495
rplW SBO_3312 50S ribosomal subunit protein L23chromosome CDS3299664 303 - 0.481848
rplX SBO_3303 50S ribosomal subunit protein L24chromosome CDS3295735 315 - 0.463492
rplY SBO_2139 50S ribosomal subunit protein L25chromosome CDS2112222 285 - 0.505263
rpmA SBO_3197 50S ribosomal subunit protein L27chromosome CDS3202017 258 + 0.496124
rpmB SBO_3639 50S ribosomal subunit protein L28chromosome CDS3657036 237 - 0.527426
rpmC SBO_3306 50S ribosomal subunit protein L29chromosome CDS3296850 192 - 0.536458
rpmD SBO_3296 50S ribosomal subunit protein L30chromosome CDS3292825 180 - 0.5
rpmE SBO_3953 50S ribosomal subunit protein L31chromosome CDS3980589 213 + 0.488263
rpmF SBO_1974 50S ribosomal subunit protein L32chromosome CDS1947793 174 - 0.54023
rpmG SBO_3638 50S ribosomal subunit protein L33chromosome CDS3656848 168 - 0.404762
rpmH SBO_3674 50S ribosomal subunit protein L34chromosome CDS3688446 141 - 0.51773
rpmI SBO_1377 50S ribosomal subunit protein Achromosome CDS1353504 198 + 0.494949
rpmJ SBO_3293 50S ribosomal subunit protein L36chromosome CDS3290900 117 - 0.478632
rpsA SBO_2199 30S ribosomal subunit protein S1chromosome CDS2177943 1674 + 0.510753
rpsB SBO_0157 30S ribosomal subunit protein S2chromosome CDS175892 726 + 0.512397
rpsC SBO_3308 30S ribosomal subunit protein S3chromosome CDS3297464 702 - 0.509971
rpsD SBO_3290 30S ribosomal subunit protein S4chromosome CDS3289337 621 - 0.505636
rpsE SBO_3297 30S ribosomal subunit protein S5chromosome CDS3293008 504 - 0.498016
rpsF SBO_4254 30S ribosomal subunit protein S6chromosome CDS4307500 396 - 0.527778
rpsG SBO_3322 30S ribosomal subunit protein S7chromosome CDS3309561 471 - 0.496815
rpsH SBO_3300 30S ribosomal subunit protein S8chromosome CDS3294435 393 - 0.501272
rpsI SBO_3159 30S ribosomal subunit protein S9chromosome CDS3164268 393 + 0.524173
rpsJ SBO_3315 30S ribosomal subunit protein S10chromosome CDS3301241 312 - 0.554487
rpsK SBO_3291 30S ribosomal subunit protein S11chromosome CDS3289991 390 - 0.515385
rpsL SBO_3323 30S ribosomal subunit protein S12chromosome CDS3310128 375 - 0.533333
rpsM SBO_3292 30S ribosomal subunit protein S13chromosome CDS3290397 357 - 0.518207
rpsN SBO_3301 30S ribosomal subunit protein S14chromosome CDS3294861 306 - 0.526144
rpsO SBO_3217 30S ribosomal subunit protein S15chromosome CDS3223283 270 + 0.518519
rpsP SBO_2745 30S ribosomal subunit protein S16chromosome CDS2754819 249 - 0.514056
rpsQ SBO_3305 30S ribosomal subunit protein S17chromosome CDS3296596 255 - 0.47451
rpsR SBO_4252 30S ribosomal subunit protein S18chromosome CDS4306947 228 - 0.526316
rpsS SBO_3310 30S ribosomal subunit protein S19chromosome CDS3298530 279 - 0.491039
rpsT SBO_0022 30S ribosomal subunit protein S20chromosome CDS20907 264 - 0.465909
rpsU SBO_2923 30S ribosomal subunit protein S21chromosome CDS2925972 216 + 0.518519
rsuA SBO_2141 16S pseudouridylate 516 synthasechromosome CDS2114540 696 + 0.525862
selB SBO_3590 selenocysteinyl-tRNA-specific translation factorchromosome CDS3598919 1845 - 0.560434
serS SBO_0826 serine tRNA synthetasechromosome CDS842267 1293 + 0.529776
sfhB SBO_2629 suppressor of ftsH mutationchromosome CDS2636166 981 - 0.525994
smpA SBO_2752 small membrane protein Achromosome CDS2762564 153 + 0.470588
spoU SBO_3726 putative RNA methylasechromosome CDS3743108 690 - 0.553623
srmB SBO_2606 ATP-dependent RNA helicasechromosome CDS2611242 1335 + 0.550562
sun SBO_3282 hypothetical proteinchromosome CDS3283489 1290 + 0.49845
tgt SBO_0300 tRNA-guanine transglycosylasechromosome CDS315108 1128 + 0.512411
thrS SBO_1375 threonine tRNA synthetasechromosome CDS1350933 1929 + 0.497667
trmA SBO_3984 tRNA (uracil-5-)-methyltransferasechromosome CDS4020747 1101 - 0.510445
trmD SBO_2743 tRNA methyltransferasechromosome CDS2753454 768 - 0.533854
trpS SBO_3371 tryptophan tRNA synthetasechromosome CDS3354659 1005 - 0.522388
truA SBO_2355 pseudouridylate synthase Ichromosome CDS2343719 813 - 0.557196
truB SBO_3216 tRNA pseudouridine 5S synthasechromosome CDS3222190 945 + 0.522751
tsf SBO_0158 protein chain elongation factor EF-Tschromosome CDS176875 852 + 0.496479
tufA SBO_3320 protein chain elongation factor EF-Tuchromosome CDS3306095 1185 - 0.531646
tufB SBO_4000 protein chain elongation factor EF-Tuchromosome CDS4034366 1185 + 0.533333
tyrS SBO_1497 tyrosine tRNA synthetasechromosome CDS1473590 1275 + 0.516078
valS SBO_4182 valine tRNA synthetasechromosome CDS4236482 2856 + 0.552171
yabO SBO_0045 hypothetical proteinchromosome CDS47358 660 - 0.542424
yadB SBO_0133 putative tRNA synthetasechromosome CDS145405 927 - 0.533981
yadP SBO_0136 hypothetical proteinchromosome CDS147720 540 - 0.559259
yaeJ SBO_0180 hypothetical proteinchromosome CDS200817 423 + 0.550827
ybfP SBO_0551 putative pectinasechromosome CDS566299 495 + 0.454545
ybjF SBO_0793 putative enzymechromosome CDS801347 1128 + 0.546986
yceC SBO_1977 hypothetical proteinchromosome CDS1949434 960 - 0.516667
ycfB SBO_1906 hypothetical proteinchromosome CDS1885842 1152 + 0.532118
ychF SBO_1864 putative GTP-binding proteinchromosome CDS1844847 1092 + 0.510989
yciH SBO_1782 hypothetical proteinchromosome CDS1760097 330 - 0.487879
yciL SBO_1797 hypothetical proteinchromosome CDS1775977 873 - 0.544101
yciO SBO_1799 hypothetical proteinchromosome CDS1778983 657 - 0.496195
yeiP SBO_2153 putative elongation factorchromosome CDS2128994 828 - 0.506039
yfcB SBO_2368 putative adenine-specific methylasechromosome CDS2356458 1266 - 0.514218
yfhC SBO_2587 putative deaminasechromosome CDS2594433 537 - 0.540037
yfiA SBO_2635 putative yhbH sigma 54 modulatorchromosome CDS2640995 342 + 0.459064
yfiF SBO_2613 hypothetical proteinchromosome CDS2617173 1038 - 0.565511
yfjA SBO_2744 hypothetical proteinchromosome CDS2754252 558 - 0.487455
ygcA SBO_2666 putative enzymechromosome CDS2670412 1302 - 0.513057
ygjO SBO_2945 putative enzymechromosome CDS2951967 1137 - 0.539138
yhaR SBO_2978 hypothetical proteinchromosome CDS2981829 453 - 0.523179
yhbY SBO_3202 hypothetical proteinchromosome CDS3206908 294 - 0.486395
yhdG SBO_3254 putative dehydrogenasechromosome CDS3258513 966 + 0.520704
yibK SBO_3612 hypothetical proteinchromosome CDS3630000 474 + 0.550633
yicN SBO_3708 hypothetical proteinchromosome CDS3724407 480 + 0.51875
yihZ SBO_3901 hypothetical proteinchromosome CDS3928022 438 + 0.552511
yjbC SBO_4050 hypothetical proteinchromosome CDS4093226 873 + 0.521191
yjbN SBO_4068 hypothetical proteinchromosome CDS4110953 1038 - 0.534682
yjeA SBO_4301 putative lysyl-tRNA synthetasechromosome CDS4350471 1008 - 0.516865
yjeJ SBO_4311 hypothetical proteinchromosome CDS4359863 870 + 0.451724
yjfH SBO_4276 hypothetical proteinchromosome CDS4324272 732 - 0.557377
yjgF SBO_4203 hypothetical proteinchromosome CDS4251447 426 + 0.504695
yjgH SBO_4199 hypothetical proteinchromosome CDS4249191 396 + 0.472222
yjiI SBO_4382 hypothetical proteinchromosome CDS4434772 501 + 0.481038
yjjT SBO_4432 putative enzymechromosome CDS4484148 1032 - 0.546512
ykgM SBO_0223 putative ribosomal proteinchromosome CDS236559 264 + 0.462121
yleA SBO_0525 hypothetical proteinchromosome CDS544412 1425 - 0.541053
yliG SBO_0727 hypothetical proteinchromosome CDS746030 1326 - 0.527903
ymfC SBO_1904 hypothetical proteinchromosome CDS1884739 624 + 0.514423
yqcB SBO_2672 hypothetical proteinchromosome CDS2679700 783 - 0.535121
yrdC SBO_3276 hypothetical proteinchromosome CDS3279125 573 - 0.525305
yrfH SBO_3387 hypothetical proteinchromosome CDS3371372 402 + 0.532338
 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2451 putative transformylasechromosome CDS2250985 1635 + 0.515596
NA SDY_2728 putative ATP synthase beta subunitchromosome CDS2526038 738 - 0.55149
NA SDY_2760 hypothetical proteinchromosome CDS2560844 360 - 0.511111
NA SDY_2883 hypothetical proteinchromosome CDS2667174 1044 + 0.54023
NA SDY_1750 hypothetical proteinchromosome CDS1593696 249 + 0.506024
NA SDY_1669 hypothetical proteinchromosome CDS1529522 1737 - 0.557283
NA SDY_1713 hypothetical proteinchromosome CDS1566429 393 + 0.51145
NA SDY_1749 hypothetical proteinchromosome CDS1593031 435 + 0.48046
NA SDY_0985 hypothetical proteinchromosome CDS933742 387 - 0.542636
NA SDY_0313 hypothetical proteinchromosome CDS305221 405 + 0.303704
NA SDY_0577 putative bacteriophage proteinchromosome CDS553055 558 - 0.473118
alaS SDY_2893 alanyl-tRNA synthetasechromosome CDS2673153 2631 - 0.535158
ansA SDY_1506 cytoplasmic L-asparaginase Ichromosome CDS1377709 1017 - 0.507375
ansB SDY_3115 periplasmic L-asparaginase IIchromosome CDS2888943 1047 + 0.5234
argS SDY_1180 arginine tRNA synthetasechromosome CDS1093741 1734 + 0.532872
asnS SDY_2327 asparagine tRNA synthetasechromosome CDS2113677 1401 + 0.523198
aspS SDY_1153 aspartate tRNA synthetasechromosome CDS1071747 1773 - 0.540891
cafA SDY_3422 bundles of cytoplasmic filamentschromosome CDS3180065 1488 - 0.518817
cca SDY_3239 tRNA nucleotidyl transferasechromosome CDS3002007 1239 + 0.564972
cysS SDY_0278 cysteine tRNA synthetasechromosome CDS272589 1386 + 0.546898
deaD SDY_3341 inducible ATP-independent RNA helicasechromosome CDS3096682 1941 - 0.553323
def SDY_3463 peptide deformylasechromosome CDS3216126 510 + 0.462745
efp SDY_4390 elongation factor Pchromosome CDS4109639 567 + 0.500882
fmt SDY_3464 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferasechromosome CDS3216650 948 + 0.523207
frr SDY_0188 ribosome releasing factorchromosome CDS193134 558 + 0.507168
ftsJ SDY_3360 cell division proteinchromosome CDS3118440 630 - 0.501587
fusA SDY_3501 GTP-binding protein chain elongation factor EF-Gchromosome CDS3238732 2115 - 0.508274
glnS SDY_0614 glutamine tRNA synthetasechromosome CDS579328 1665 + 0.524925
gltX SDY_2600 glutamate tRNA synthetase, catalytic subunitchromosome CDS2396823 1416 - 0.526836
glyQ SDY_4344 glycine tRNA synthetase, alpha subunitchromosome CDS4070118 912 + 0.554825
glyS SDY_4345 glycine tRNA synthetase, beta subunitchromosome CDS4071039 2070 + 0.554589
gshB SDY_3125 glutathione synthetasechromosome CDS2896845 951 - 0.53102
hemK SDY_1261 possible protoporphyrinogen oxidasechromosome CDS1168185 834 + 0.552758
hisS SDY_2710 histidine tRNA synthetasechromosome CDS2502579 1275 - 0.545098
ileS SDY_0048 isoleucine tRNA synthetasechromosome CDS41180 2817 + 0.555201
infA SDY_2377 protein chain initiation factor IF-1chromosome CDS2180223 219 + 0.484018
infB SDY_3347 protein chain initiation factor IF-2chromosome CDS3104053 2673 - 0.533483
infC SDY_1813 protein chain initiation factor IF-3chromosome CDS1649160 435 - 0.478161
ksgA SDY_0076 S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferasechromosome CDS70731 822 - 0.529197
lasT SDY_4664 hypothetical proteinchromosome CDS4368522 687 + 0.491994
leuS SDY_0564 leucine tRNA synthetasechromosome CDS545011 2583 - 0.53194
lysS SDY_3192 lysine tRNA synthetase, constitutivechromosome CDS2958869 1518 + 0.525692
map SDY_0184 methionine aminopeptidasechromosome CDS188974 795 - 0.501887
miaA SDY_4418 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4133625 951 - 0.528917
pcnB SDY_0159 poly(A) polymerase Ichromosome CDS158058 1365 - 0.561905
pheS SDY_1809 phenylalanine tRNA synthetase, alpha-subunitchromosome CDS1647027 984 - 0.54065
pmrD SDY_2455 polymyxin resistance protein Bchromosome CDS2256252 261 - 0.444444
pnp SDY_3343 polynucleotide phosphorylasechromosome CDS3099744 2205 - 0.53424
prfA SDY_1260 peptide chain release factor RF-1chromosome CDS1167103 1083 + 0.531856
prfB SDY_3191 peptide chain release factor RF-2chromosome CDS2957978 882 + 0.536281
prfC SDY_4634 peptide chain release factor RF-3chromosome CDS4336776 1590 + 0.537107
prfH SDY_0481 probable peptide chain release factorchromosome CDS467989 501 - 0.546906
prmA SDY_3436 methylase for 50S ribosomal subunit protein L11chromosome CDS3193564 882 + 0.545351
proS SDY_0213 proline tRNA synthetasechromosome CDS218029 1719 - 0.541012
pth SDY_1253 peptidyl-tRNA hydrolasechromosome CDS1160020 585 - 0.499145
queA SDY_0329 probable S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS317827 1071 - 0.542484
rbfA SDY_3346 ribosome-binding factor Achromosome CDS3103488 402 - 0.524876
rhlB SDY_3969 putative ATP-dependent RNA helicasechromosome CDS3697522 1266 + 0.518957
rhlE SDY_0806 putative ATP-dependent RNA helicasechromosome CDS752216 1365 - 0.561905
rimJ SDY_2086 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5chromosome CDS1895321 585 - 0.492308
rimK SDY_0743 ribosomal protein S6 modification proteinchromosome CDS691731 903 - 0.559247
rimL SDY_1751 acetyl transferasechromosome CDS1593936 540 - 0.442593
rmf SDY_0926 ribosome modulation factorchromosome CDS877056 168 + 0.541667
rnd SDY_1708 RNase Dchromosome CDS1559974 1128 - 0.538121
rne SDY_2067 RNase Echromosome CDS1876396 3186 + 0.553672
rnpA SDY_4186 RNase P, protein componentchromosome CDS3920372 360 + 0.555556
rph SDY_4074 RNase PHchromosome CDS3809358 717 - 0.560669
rplA SDY_3744 50S ribosomal subunit protein L1chromosome CDS3479085 705 - 0.514894
rplB SDY_3493 50S ribosomal subunit protein L2chromosome CDS3232981 822 - 0.524331
rplC SDY_3496 50S ribosomal subunit protein L3chromosome CDS3234735 630 - 0.514286
rplD SDY_3495 50S ribosomal subunit protein L4chromosome CDS3234119 606 - 0.529703
rplE SDY_3484 50S ribosomal subunit protein L5chromosome CDS3229337 540 - 0.5
rplF SDY_3481 50S ribosomal subunit protein L6chromosome CDS3228045 534 - 0.520599
rplI SDY_4372 50S ribosomal subunit protein L9chromosome CDS4093687 450 + 0.495556
rplJ SDY_3743 50S ribosomal subunit protein L10chromosome CDS3478175 498 - 0.526104
rplK SDY_3745 50S ribosomal subunit protein L11chromosome CDS3479793 429 - 0.522144
rplL SDY_3742 50S ribosomal subunit protein L7/L12chromosome CDS3477743 366 - 0.464481
rplM SDY_3407 50S ribosomal subunit protein L13chromosome CDS3162242 429 - 0.508159
rplN SDY_3486 50S ribosomal subunit protein L14chromosome CDS3230216 372 - 0.510753
rplO SDY_3477 50S ribosomal subunit protein L15chromosome CDS3226543 435 - 0.535632
rplP SDY_3489 50S ribosomal subunit protein L16chromosome CDS3231197 411 - 0.518248
rplQ SDY_3470 50S ribosomal subunit protein L17chromosome CDS3222054 384 - 0.536458
rplR SDY_3480 50S ribosomal subunit protein L18chromosome CDS3227682 354 - 0.533898
rplS SDY_2780 50S ribosomal subunit protein L19chromosome CDS2575807 348 - 0.482759
rplT SDY_1811 50S ribosomal subunit protein L20chromosome CDS1648460 357 - 0.478992
rplU SDY_3367 50S ribosomal subunit protein L21chromosome CDS3124399 312 - 0.483974
rplV SDY_3491 50S ribosomal subunit protein L22chromosome CDS3232339 333 - 0.498498
rplW SDY_3494 50S ribosomal subunit protein L23chromosome CDS3233820 303 - 0.475248
rplX SDY_3485 50S ribosomal subunit protein L24chromosome CDS3229891 315 - 0.463492
rplY SDY_0894 50S ribosomal subunit protein L25chromosome CDS841509 285 - 0.505263
rpmA SDY_3366 50S ribosomal subunit protein L27chromosome CDS3124121 258 - 0.5
rpmB SDY_4067 50S ribosomal subunit protein L28chromosome CDS3803707 237 - 0.527426
rpmC SDY_3488 50S ribosomal subunit protein L29chromosome CDS3231006 192 - 0.536458
rpmD SDY_3478 50S ribosomal subunit protein L30chromosome CDS3226981 180 - 0.5
rpmE SDY_3801 50S ribosomal subunit protein L31chromosome CDS3539529 213 - 0.488263
rpmF SDY_2061 50S ribosomal subunit protein L32chromosome CDS1872449 174 - 0.54023
rpmG SDY_4066 50S ribosomal subunit protein L33chromosome CDS3803519 168 - 0.404762
rpmH SDY_4185 50S ribosomal subunit protein L34chromosome CDS3920215 141 + 0.524823
rpmI SDY_1812 50S ribosomal subunit protein Achromosome CDS1648869 198 - 0.489899
rpmJ SDY_3475 50S ribosomal subunit protein L36chromosome CDS3225056 117 - 0.478632
rpsA SDY_2347 30S ribosomal subunit protein S1chromosome CDS2139536 1674 - 0.507766
rpsB SDY_0185 30S ribosomal subunit protein S2chromosome CDS190136 726 + 0.509642
rpsC SDY_3490 30S ribosomal subunit protein S3chromosome CDS3231620 702 - 0.507123
rpsD SDY_3472 30S ribosomal subunit protein S4chromosome CDS3223493 621 - 0.505636
rpsE SDY_3479 30S ribosomal subunit protein S5chromosome CDS3227164 504 - 0.5
rpsF SDY_4369 30S ribosomal subunit protein S6chromosome CDS4092697 396 + 0.527778
rpsG SDY_3502 30S ribosomal subunit protein S7chromosome CDS3240943 471 - 0.492569
rpsH SDY_3482 30S ribosomal subunit protein S8, and regulatorchromosome CDS3228591 393 - 0.501272
rpsI SDY_3406 30S ribosomal subunit protein S9chromosome CDS3161834 393 - 0.521628
rpsJ SDY_3497 30S ribosomal subunit protein S10chromosome CDS3235397 312 - 0.554487
rpsK SDY_3473 30S ribosomal subunit protein S11chromosome CDS3224147 390 - 0.517949
rpsL SDY_3503 30S ribosomal subunit protein S12chromosome CDS3241510 375 - 0.533333
rpsM SDY_3474 30S ribosomal subunit protein S13chromosome CDS3224553 357 - 0.515406
rpsN SDY_3483 30S ribosomal subunit protein S14chromosome CDS3229017 306 - 0.526144
rpsO SDY_3344 30S ribosomal subunit protein S15chromosome CDS3102126 270 - 0.514815
rpsP SDY_2783 30S ribosomal subunit protein S16chromosome CDS2577561 249 - 0.51004
rpsQ SDY_3487 30S ribosomal subunit protein S17chromosome CDS3230752 255 - 0.47451
rpsR SDY_4371 30S ribosomal subunit protein S18chromosome CDS4093418 228 + 0.526316
rpsS SDY_3492 30S ribosomal subunit protein S19chromosome CDS3232686 279 - 0.491039
rpsT SDY_0045 30S ribosomal subunit protein S20chromosome CDS39604 264 - 0.465909
rpsU SDY_3249 30S ribosomal subunit protein S21chromosome CDS3011084 216 + 0.518519
rsuA SDY_0896 16S pseudouridylate 516 synthasechromosome CDS843828 696 + 0.530172
selB SDY_4213 selenocysteinyl-tRNA-specific translation factorchromosome CDS3943823 1845 + 0.56477
serS SDY_2368 serine tRNA synthetase; also charges selenocystein tRNA with serinechromosome CDS2165833 1293 - 0.526682
sfhB SDY_2837 suppressor of ftsH mutationchromosome CDS2630800 981 - 0.529052
smpA SDY_2790 small protein A precursorchromosome CDS2585159 300 + 0.493333
spoU SDY_4083 putative RNA methylasechromosome CDS3818037 690 + 0.550725
srmB SDY_2817 ATP-dependent RNA helicasechromosome CDS2607737 1335 + 0.545318
sun SDY_3465 hypothetical proteinchromosome CDS3217643 1290 + 0.495349
tgt SDY_0328 tRNA-guanine transglycosylasechromosome CDS316645 1128 - 0.513298
thrS SDY_1814 threonine tRNA synthetasechromosome CDS1649706 1929 - 0.499222
trmA SDY_3763 tRNA (uracil-5-)-methyltransferasechromosome CDS3495136 1101 + 0.508629
trmD SDY_2781 tRNA methyltransferasechromosome CDS2576196 768 - 0.532552
trpS SDY_3695 tryptophan tRNA synthetasechromosome CDS3426512 1005 + 0.523383
truA SDY_2517 pseudouridylate synthase Ichromosome CDS2315511 813 - 0.555966
truB SDY_3345 tRNA pseudouridine 5S synthasechromosome CDS3102544 945 - 0.52381
tsf SDY_0186 protein chain elongation factor EF-Tschromosome CDS191119 852 + 0.496479
tufA SDY_3500 protein chain elongation factor EF-Tuchromosome CDS3237477 1185 - 0.533333
tufB SDY_3748 protein chain elongation factor EF-Tuchromosome CDS3481540 1185 - 0.535021
tyrS SDY_1860 tyrosine tRNA synthetasechromosome CDS1695449 1275 - 0.520784
valS SDY_4282 valine tRNA synthetasechromosome CDS4009180 2856 - 0.553221
yabO SDY_0082 hypothetical proteinchromosome CDS78719 660 - 0.540909
yabP SDY_0081 hypothetical proteinchromosome CDS77596 717 + 0.3947
yadB SDY_0160 putative tRNA synthetasechromosome CDS159515 927 - 0.533981
yadP SDY_0163 hypothetical proteinchromosome CDS161830 540 - 0.559259
yaeJ SDY_0210 hypothetical proteinchromosome CDS215862 423 + 0.536643
ybjF SDY_0736 putative enzymechromosome CDS684954 1128 - 0.544326
yceC SDY_2065 hypothetical proteinchromosome CDS1874864 960 - 0.515625
ycfB SDY_2019 hypothetical proteinchromosome CDS1827448 1152 + 0.527778
ychF SDY_1252 putative GTP-binding proteinchromosome CDS1158812 1092 - 0.510989
yciH SDY_1358 hypothetical proteinchromosome CDS1255239 330 + 0.484848
yciL SDY_1339 hypothetical proteinchromosome CDS1237404 873 + 0.54181
yciO SDY_1335 hypothetical proteinchromosome CDS1235319 657 + 0.48554
yeiP SDY_0908 putative elongation factorchromosome CDS858289 828 - 0.508454
yfcB SDY_2530 putative adenine-specific methylasechromosome CDS2327600 1266 - 0.514218
yfhC SDY_2749 putative deaminasechromosome CDS2551235 537 - 0.528864
yfiA SDY_2768 putative yhbH sigma 54 modulatorchromosome CDS2566779 342 - 0.461988
yfiF SDY_2824 hypothetical proteinchromosome CDS2613347 1038 - 0.563584
yfjA SDY_2782 hypothetical proteinchromosome CDS2576994 558 - 0.491039
ygcA SDY_3002 putative enzymechromosome CDS2769674 1302 - 0.511521
ygjO SDY_3267 putative enzymechromosome CDS3034742 1167 - 0.533847
yhbH SDY_3384 probable sigma-54 modulation proteinchromosome CDS3137422 288 + 0.444444
yhbY SDY_3361 hypothetical proteinchromosome CDS3119195 294 + 0.482993
yhdG SDY_3437 putative dehydrogenasechromosome CDS3194774 966 + 0.52381
yibK SDY_4039 hypothetical proteinchromosome CDS3776996 474 + 0.552743
yicN SDY_4144 hypothetical proteinchromosome CDS3876073 480 - 0.516667
yihZ SDY_3856 hypothetical proteinchromosome CDS3588905 438 - 0.545662
yjbC SDY_4310 hypothetical proteinchromosome CDS4038749 873 - 0.515464
yjbN SDY_4525 hypothetical proteinchromosome CDS4233686 1038 - 0.530829
yjeA SDY_4399 putative lysyl-tRNA synthetasechromosome CDS4116553 1008 + 0.515873
yjfH SDY_4409 hypothetical proteinchromosome CDS4123832 732 - 0.558743
yjgF SDY_4262 hypothetical proteinchromosome CDS3996088 426 - 0.511737
yjgH SDY_4266 hypothetical proteinchromosome CDS3998374 396 - 0.469697
yjjT SDY_4630 putative enzymechromosome CDS4334031 1032 - 0.556202
yleA SDY_0597 hypothetical proteinchromosome CDS567017 1425 - 0.537544
ymfC SDY_2017 hypothetical proteinchromosome CDS1826345 624 + 0.522436
yohI SDY_2147 putative regulator proteinchromosome CDS1945818 576 + 0.520833
yqcB SDY_3008 hypothetical proteinchromosome CDS2778965 783 - 0.53129
yrdC SDY_3459 hypothetical proteinchromosome CDS3213279 573 - 0.528796
yrfH SDY_3678 hypothetical proteinchromosome CDS3410412 402 - 0.529851
 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S1534 hypothetical proteinchromosome CDS1493507 393 - 0.506361
NA S1083 hypothetical proteinchromosome CDS1064065 387 - 0.537468
NA S2751 putative ATP synthase beta subunitchromosome CDS2641023 741 - 0.547908
alaS S2911 alanyl-tRNA synthetasechromosome CDS2787515 2631 - 0.537438
ansA S1571 cytoplasmic asparaginase Ichromosome CDS1529251 1017 - 0.508358
ansB S3157 periplasmic L-asparaginase IIchromosome CDS3033957 1047 - 0.52531
argS S2007 arginyl-tRNA synthetasechromosome CDS1930222 1734 + 0.529988
asnS S0991 asparaginyl-tRNA synthetasechromosome CDS976776 1401 - 0.528194
aspS S1942 aspartyl-tRNA synthetasechromosome CDS1881818 1773 - 0.538071
cafA S3502 ribonuclease Gchromosome CDS3373980 1470 - 0.521088
cca S3302 tRNA nucleotidyl transferasechromosome CDS3179679 1239 + 0.561743
cysS S0465 cysteinyl-tRNA synthetasechromosome CDS472936 1386 + 0.547619
dbpA S1447 ATP-dependent RNA helicasechromosome CDS1410534 1368 + 0.516082
deaD S3420 inducible ATP-independent RNA helicasechromosome CDS3289294 1941 - 0.555384
def S3543 peptide deformylasechromosome CDS3406690 510 + 0.462745
efp S4570 elongation factor Pchromosome CDS4472279 567 + 0.497355
fmt S3544 methionyl-tRNA formyltransferasechromosome CDS3407214 948 + 0.525316
frr S0165 ribosome releasing factorchromosome CDS183303 558 + 0.508961
ftsJ S3437 cell division proteinchromosome CDS3310335 630 - 0.501587
fusA S4404 elongation factor EF-2chromosome CDS4330060 1968 + 0.508638
glnS S0624 glutaminyl-tRNA synthetasechromosome CDS640196 1665 - 0.524324
gltX S2605 glutamyl-tRNA synthetasechromosome CDS2498807 1416 - 0.525424
glyQ S4165 glycyl-tRNA synthetase alpha subunitchromosome CDS4068237 912 + 0.558114
glyS S4166 glycyl-tRNA synthetase beta subunitchromosome CDS4069158 2070 + 0.557005
gshB S3142 glutathione synthetasechromosome CDS3022370 951 + 0.535226
hemK S1299 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1262690 834 + 0.551559
hisS S2732 histidyl-tRNA synthetasechromosome CDS2622342 1275 - 0.543529
ileS S0025 isoleucyl-tRNA synthetasechromosome CDS21345 2817 + 0.556621
infA S0884 translation initiation factor IF-1chromosome CDS872410 219 - 0.484018
infB S3426 translation initiation factor IF-2chromosome CDS3296665 2649 - 0.534541
infC S1631 protein chain initiation factor IF-3chromosome CDS1584854 435 + 0.473563
iucB S4055 siderophore biosynthesis proteinchromosome CDS3951736 948 - 0.564346
ksgA S0050 dimethyladenosine transferasechromosome CDS50413 822 - 0.534063
lasT S4706 hypothetical proteinchromosome CDS4598644 687 + 0.502183
leuS S0661 leucyl-tRNA synthetasechromosome CDS671969 2583 + 0.533875
lysS S3075 lysyl-tRNA synthetasechromosome CDS2959661 1518 - 0.528986
map S0161 methionine aminopeptidasechromosome CDS179143 795 - 0.50566
miaA S4594 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4496230 951 + 0.534175
pcnB S0138 poly(A) polymerase Ichromosome CDS148998 1365 - 0.557509
pheS S1634 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1586441 984 + 0.539634
pnp S3422 polynucleotide phosphorylasechromosome CDS3292356 2205 - 0.535147
prfA S1298 peptide chain release factor 1chromosome CDS1261608 1083 + 0.530009
prfB S3076 peptide chain release factor 2chromosome CDS2961188 1098 - 0.532787
prfC S4678 peptide chain release factor 3chromosome CDS4568436 1590 + 0.535849
prfH S0305 peptide chain release factor 2chromosome CDS304523 456 + 0.563596
prmA S3514 ribosomal protein L11 methyltransferasechromosome CDS3386724 882 + 0.544218
proS S0187 prolyl-tRNA synthetasechromosome CDS207442 1719 - 0.544503
pth S1291 peptidyl-tRNA hydrolasechromosome CDS1254525 585 - 0.500855
queA S0350 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS353645 1071 + 0.539683
rbfA S3425 ribosome-binding factor Achromosome CDS3296100 402 - 0.529851
relE S1669 hypothetical proteinchromosome CDS1620096 288 - 0.46875
rhlB S3906 ATP-dependent RNA helicasechromosome CDS3799099 1266 + 0.524487
rhlE S0788 putative ATP-dependent RNA helicasechromosome CDS769856 1221 + 0.553645
rimJ S1150 ribosomal-protein-alanine acetyltransferasechromosome CDS1116215 585 + 0.495726
rimK S0848 ribosomal protein S6 modification proteinchromosome CDS833540 903 + 0.555925
rimL S1491 ribosomal-protein-serine acetyltransferasechromosome CDS1453348 537 + 0.439479
rmf S1019 ribosome modulation factorchromosome CDS1006747 168 + 0.547619
rna S0535 RNase Ichromosome CDS545935 825 - 0.509091
rnd S1539 RNase Dchromosome CDS1499240 1116 + 0.543011
rne S1168 RNase Echromosome CDS1131785 3183 - 0.558278
rnpA S4011 ribonuclease Pchromosome CDS3906329 360 + 0.561111
rph S4086 ribonuclease PHchromosome CDS3988393 717 + 0.563459
rplA S3678 50S ribosomal protein L1chromosome CDS3573883 705 - 0.513475
rplB S4413 50S ribosomal protein L2chromosome CDS4336957 822 + 0.526764
rplC S4410 50S ribosomal protein L3chromosome CDS4335395 630 + 0.514286
rplD S4411 50S ribosomal protein L4chromosome CDS4336035 606 + 0.529703
rplE S4422 50S ribosomal protein L5chromosome CDS4340883 540 + 0.498148
rplF S4425 50S ribosomal protein L6chromosome CDS4342181 534 + 0.524345
rplI S4628 50S ribosomal protein L9chromosome CDS4522545 450 + 0.497778
rplJ S3677 50S ribosomal protein L10chromosome CDS3572973 498 - 0.524096
rplK S3679 50S ribosomal protein L11chromosome CDS3574591 429 - 0.522144
rplL S3676 50S ribosomal protein L7/L12chromosome CDS3572541 366 - 0.461749
rplM S3486 50S ribosomal protein L13chromosome CDS3356178 429 - 0.503497
rplN S4420 50S ribosomal protein L14chromosome CDS4340172 372 + 0.510753
rplO S4429 50S ribosomal protein L15chromosome CDS4343782 435 + 0.535632
rplP S4417 50S ribosomal protein L16chromosome CDS4339152 411 + 0.518248
rplQ S4436 50S ribosomal protein L17chromosome CDS4348322 384 + 0.536458
rplR S4426 50S ribosomal protein L18chromosome CDS4342724 354 + 0.536723
rplS S2843 50S ribosomal protein L19chromosome CDS2737468 348 - 0.482759
rplT S1633 50S ribosomal protein L20chromosome CDS1585635 357 + 0.481793
rplU S3444 50S ribosomal protein L21chromosome CDS3316440 312 - 0.483974
rplV S4415 50S ribosomal protein L22chromosome CDS4338088 333 + 0.495495
rplW S4412 50S ribosomal protein L23chromosome CDS4336637 303 + 0.481848
rplX S4421 50S ribosomal protein L24chromosome CDS4340554 315 + 0.460317
rplY S2401 50S ribosomal protein L25chromosome CDS2285174 285 + 0.498246
rpmA S3443 50S ribosomal protein L27chromosome CDS3316162 258 - 0.496124
rpmB S4092 50S ribosomal protein L28chromosome CDS3993269 237 + 0.531646
rpmC S4418 50S ribosomal protein L29chromosome CDS4339562 192 + 0.536458
rpmD S4428 50S ribosomal protein L30chromosome CDS4343599 180 + 0.494444
rpmE S3733 50S ribosomal subunit protein L31chromosome CDS3630915 213 - 0.488263
rpmF S1173 50S ribosomal protein L32chromosome CDS1137976 174 + 0.54023
rpmG S4093 50S ribosomal protein L33chromosome CDS3993526 168 + 0.39881
rpmH S4010 50S ribosomal protein L34chromosome CDS3906172 141 + 0.51773
rpmI S1632 50S ribosomal protein L35chromosome CDS1585385 198 + 0.494949
rpmJ S4431 50S ribosomal protein L36chromosome CDS4345587 117 + 0.478632
rpsA S0971 30S ribosomal protein S1chromosome CDS949755 1674 + 0.510753
rpsB S0162 30S ribosomal protein S2chromosome CDS180305 726 + 0.511019
rpsC S4416 30S ribosomal protein S3chromosome CDS4338438 702 + 0.507123
rpsD S4434 30S ribosomal protein S4chromosome CDS4346658 609 + 0.509031
rpsE S4427 30S ribosomal protein S5chromosome CDS4343092 504 + 0.498016
rpsF S4625 30S ribosomal protein S6chromosome CDS4521555 396 + 0.527778
rpsG S4403 30S ribosomal protein S7chromosome CDS4329345 471 + 0.496815
rpsH S4424 30S ribosomal protein S8chromosome CDS4341776 393 + 0.501272
rpsI S3485 30S ribosomal protein S9chromosome CDS3355770 393 - 0.524173
rpsJ S4409 30S ribosomal protein S10chromosome CDS4335051 312 + 0.554487
rpsK S4433 30S ribosomal protein S11chromosome CDS4346223 390 + 0.515385
rpsL S4402 30S ribosomal protein S12chromosome CDS4328874 375 + 0.533333
rpsM S4432 30S ribosomal protein S13chromosome CDS4345850 357 + 0.518207
rpsN S4423 30S ribosomal protein S14chromosome CDS4341437 306 + 0.526144
rpsO S3423 30S ribosomal protein S15chromosome CDS3294738 270 - 0.514815
rpsP S2846 30S ribosomal protein S16chromosome CDS2739222 249 - 0.514056
rpsQ S4419 30S ribosomal protein S17chromosome CDS4339753 255 + 0.47451
rpsR S4627 30S ribosomal protein S18chromosome CDS4522276 228 + 0.526316
rpsS S4414 30S ribosomal protein S19chromosome CDS4337795 279 + 0.491039
rpsT S0022 30S ribosomal subunit protein S20chromosome CDS19769 186 - 0.456989
rpsU S3311 30S ribosomal protein S21chromosome CDS3188482 216 + 0.518519
rsmC S4674 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4565691 1032 - 0.546512
rsuA S2399 16S pseudouridylate 516 synthasechromosome CDS2282444 696 - 0.533046
rumA S2992 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2867389 1302 - 0.515361
selB S4140 selenocysteinyl-tRNA-specific translation factorchromosome CDS4041059 1845 + 0.56206
serS S0893 seryl-tRNA synthetasechromosome CDS885647 1293 + 0.527456
sfhB S2829 ftsH mutation suppressorchromosome CDS2724332 981 + 0.529052
smpA S2854 small membrane protein Achromosome CDS2746967 153 + 0.470588
spoU S4078 putative RNA methylasechromosome CDS3979737 690 - 0.552174
srmB S2811 ATP-dependent RNA helicasechromosome CDS2703555 1335 + 0.549064
sun S3545 hypothetical proteinchromosome CDS3408207 1290 + 0.5
tgt S0351 queuine tRNA-ribosyltransferasechromosome CDS354770 1128 + 0.507092
thrS S1630 threonyl-tRNA synthetasechromosome CDS1582814 1929 + 0.498186
trmA S3697 tRNA (uracil-5-)-methyltransferasechromosome CDS3589937 1101 + 0.510445
trmD S2844 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2737857 768 - 0.532552
trpS S4360 tryptophanyl-tRNA synthetasechromosome CDS4289858 1005 + 0.520398
truA S2529 tRNA pseudouridine synthase Achromosome CDS2422393 813 - 0.555966
truB S3424 tRNA pseudouridine synthase Bchromosome CDS3295156 945 - 0.520635
tsf S0163 elongation factor Tschromosome CDS181288 852 + 0.496479
tuf S3682 elongation factor Tuchromosome CDS3576338 1185 - 0.532489
tuf S4405 elongation factor Tuchromosome CDS4332098 1185 + 0.531646
tyrS S1794 tyrosyl-tRNA synthetasechromosome CDS1732304 1275 - 0.517647
valS S4492 valyl-tRNA synthetasechromosome CDS4395931 2856 + 0.547619
yabO S0055 hypothetical proteinchromosome CDS57100 660 - 0.542424
yadB S0139 glutamyl-tRNA synthetasechromosome CDS150455 927 - 0.535059
yadP S0142 hypothetical proteinchromosome CDS152770 540 - 0.559259
yaeJ S0184 hypothetical proteinchromosome CDS205264 423 + 0.541371
ybfG S2467 hypothetical proteinchromosome CDS2360657 1551 + 0.513217
ybjF S0855 23S rRNA (uracil-5-)-methyltransferasechromosome CDS840092 1128 + 0.546986
yceC S1170 hypothetical proteinchromosome CDS1135549 960 + 0.515625
ycfB S1235 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1196744 1152 - 0.537326
ychF S1290 putative GTP-binding proteinchromosome CDS1253317 1092 - 0.510073
yciH S1369 hypothetical proteinchromosome CDS1336805 330 + 0.49697
yciL S1356 hypothetical proteinchromosome CDS1321006 873 + 0.542955
yciO S1355 hypothetical proteinchromosome CDS1320249 657 + 0.496195
yeiP S2387 elongation factor Pchromosome CDS2267851 828 + 0.507246
yfcB S2542 putative adenine-specific methylasechromosome CDS2435088 1266 - 0.511848
yfhC S2778 putative deaminasechromosome CDS2675813 537 - 0.540037
yfiA S2835 putative yhbH sigma 54 modulatorchromosome CDS2730439 342 + 0.461988
yfiF S2816 hypothetical proteinchromosome CDS2707976 1038 - 0.565511
yfjA S2845 16S rRNA-processing proteinchromosome CDS2738655 549 - 0.48816
ygjO S3331 putative enzymechromosome CDS3213641 1137 - 0.53562
yhaR S3365 hypothetical proteinchromosome CDS3242345 390 - 0.525641
yhbH S3461 probable sigma-54 modulation proteinchromosome CDS3329459 288 + 0.444444
yhbY S3438 hypothetical proteinchromosome CDS3311090 294 + 0.486395
yhdG S3515 putative dehydrogenasechromosome CDS3388057 843 + 0.520759
yibK S4123 hypothetical proteinchromosome CDS4020933 474 - 0.550633
yicN S3970 hypothetical proteinchromosome CDS3863814 480 - 0.51875
yihZ S3787 D-tyrosyl-tRNA deacylasechromosome CDS3683122 438 - 0.552511
yjbC S3635 hypothetical proteinchromosome CDS3517246 873 - 0.520046
yjbN S3574 hypothetical proteinchromosome CDS3443535 1020 + 0.532353
yjeA S4578 lysyl-tRNA synthetasechromosome CDS4479223 978 + 0.522495
yjeJ S4566 hypothetical proteinchromosome CDS4469178 870 - 0.454023
yjfH S4603 hypothetical proteinchromosome CDS4506253 732 + 0.560109
yjgF S4509 hypothetical proteinchromosome CDS4408360 426 + 0.507042
yjgH S4504 hypothetical proteinchromosome CDS4406103 396 + 0.474747
yjiI S4443 RNA 2'-phosphotransferasechromosome CDS4353240 687 - 0.487627
yleA S0643 hypothetical proteinchromosome CDS652997 1425 + 0.540351
yliG S0828 hypothetical proteinchromosome CDS817025 1326 - 0.527149
ymfC S1237 hypothetical proteinchromosome CDS1198375 624 - 0.516026
yohI S2354 putative regulator proteinchromosome CDS2231683 948 - 0.543249
yqcB S2998 hypothetical proteinchromosome CDS2876691 783 - 0.535121
yrdC S3538 hypothetical proteinchromosome CDS3403808 573 - 0.52356
yrfH S4344 hypothetical proteinchromosome CDS4273740 402 - 0.532338
 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF1419 hypothetical proteinchromosome CDS1456576 393 - 0.506361
NA SF2579 putative ATP synthase beta subunitchromosome CDS2647436 741 - 0.547908
NA SF1013 hypothetical proteinchromosome CDS1059833 387 - 0.537468
alaS SF2720 alanyl-tRNA synthetasechromosome CDS2792881 2631 - 0.537438
ansA SF1456 cytoplasmic asparaginase Ichromosome CDS1490877 1017 - 0.508358
ansB SF2954 periplasmic L-asparaginase IIchromosome CDS3041781 1047 - 0.52531
argS SF1917 arginyl-tRNA synthetasechromosome CDS1953557 1734 + 0.529988
asnS SF0927 asparaginyl-tRNA synthetasechromosome CDS972807 1401 - 0.528194
aspS SF1876 aspartyl-tRNA synthetasechromosome CDS1912622 1773 - 0.537507
cafA SF3285 ribonuclease Gchromosome CDS3383898 1470 - 0.521088
cca SF3097 tRNA nucleotidyl transferasechromosome CDS3191016 1239 + 0.561743
cysS SF0457 cysteinyl-tRNA synthetasechromosome CDS473134 1386 + 0.547619
dbpA SF1826 ATP-dependent RNA helicasechromosome CDS1864246 1368 - 0.516082
deaD SF3203 inducible ATP-independent RNA helicasechromosome CDS3298178 1941 - 0.555384
def SF3318 peptide deformylasechromosome CDS3416515 510 + 0.462745
efp SF4303 elongation factor Pchromosome CDS4480086 567 + 0.497355
fmt SF3319 methionyl-tRNA formyltransferasechromosome CDS3417039 948 + 0.525316
frr SF0162 ribosome releasing factorchromosome CDS183816 558 + 0.508961
ftsJ SF3219 cell division proteinchromosome CDS3319218 630 - 0.501587
fusA SF3358 GTP-binding protein chain elongation factor EF-Gchromosome CDS3440918 1875 - 0.5104
glnS SF0613 glutaminyl-tRNA synthetasechromosome CDS644078 1665 - 0.524324
gltX SF2462 glutamyl-tRNA synthetasechromosome CDS2520675 1416 - 0.525424
glyQ SF3603 glycyl-tRNA synthetase alpha subunitchromosome CDS3706070 912 - 0.558114
glyS SF3602 glycyl-tRNA synthetase beta subunitchromosome CDS3703991 2070 - 0.557005
gshB SF2938 glutathione synthetasechromosome CDS3030181 951 + 0.535226
hemK SF1215 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1262975 834 + 0.551559
hisS SF2560 histidyl-tRNA synthetasechromosome CDS2628753 1275 - 0.543529
ileS SF0022 isoleucyl-tRNA synthetasechromosome CDS21346 2817 + 0.556975
infA SF0843 translation initiation factor IF-1chromosome CDS877597 219 - 0.484018
infB SF3209 translation initiation factor IF-2chromosome CDS3305549 2649 - 0.534541
infC SF1513 protein chain initiation factor IF-3chromosome CDS1546478 435 + 0.473563
iucB SF3716 siderophore biosynthesis proteinchromosome CDS3822575 948 + 0.564346
ksgA SF0048 dimethyladenosine transferasechromosome CDS50927 822 - 0.534063
lasT SF4434 hypothetical proteinchromosome CDS4606493 687 + 0.502183
leuS SF0639 leucyl-tRNA synthetasechromosome CDS675737 2583 + 0.533875
lysS SF2876 lysyl-tRNA synthetasechromosome CDS2967572 1518 - 0.528986
map SF0158 methionine aminopeptidasechromosome CDS179656 795 - 0.50566
miaA SF4326 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4504071 951 + 0.534175
ospD1 CP0022 OspD1, secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS18898 678 + 0.355457
pcnB SF0135 poly(A) polymerase Ichromosome CDS149507 1365 - 0.557509
pheS SF1517 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1548065 984 + 0.539634
pnp SF3205 polynucleotide phosphorylasechromosome CDS3301240 2205 - 0.535147
prfA SF1214 peptide chain release factor 1chromosome CDS1261893 1083 + 0.530009
prfB SF2877 chromosome pseudo2969099 1099 - 0.532302
prfB SF2877 chromosome pseudo2969099 1099 - 0.532302
prfC SF4406 peptide chain release factor 3chromosome CDS4576286 1590 + 0.535849
prfH SF0284 peptide chain release factor 2chromosome CDS301971 456 + 0.563596
prmA SF3297 ribosomal protein L11 methyltransferasechromosome CDS3396642 882 + 0.544218
proS SF0185 prolyl-tRNA synthetasechromosome CDS207955 1719 - 0.544503
pth SF1207 peptidyl-tRNA hydrolasechromosome CDS1254810 585 - 0.500855
queA SF0342 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS354510 1071 + 0.539683
rbfA SF3208 ribosome-binding factor Achromosome CDS3304984 402 - 0.529851
relE SF1548 hypothetical proteinchromosome CDS1581699 288 - 0.46875
rhlB SF3853 ATP-dependent RNA helicasechromosome CDS3972930 1266 - 0.524487
rhlE SF0747 putative ATP-dependent RNA helicasechromosome CDS773699 1221 + 0.553645
rimJ SF1072 ribosomal-protein-alanine acetyltransferasechromosome CDS1113323 585 + 0.495726
rimK SF0806 ribosomal protein S6 modification proteinchromosome CDS838722 903 + 0.554817
rimL SF1783 ribosomal-protein-serine acetyltransferasechromosome CDS1820471 537 - 0.439479
rna SF0529 RNase Ichromosome CDS550043 825 - 0.509091
rnd SF1424 RNase Dchromosome CDS1462309 1116 + 0.543011
rne SF1088 RNase Echromosome CDS1128893 3183 - 0.558278
rnpA SF3760 ribonuclease Pchromosome CDS3867907 360 - 0.561111
rph SF3682 ribonuclease PHchromosome CDS3786148 717 - 0.563459
rplA SF4057 50S ribosomal protein L1chromosome CDS4198657 681 + 0.51395
rplB SF3349 50S ribosomal protein L2chromosome CDS3434927 822 - 0.526764
rplC SF3352 50S ribosomal protein L3chromosome CDS3436681 630 - 0.514286
rplD SF3351 50S ribosomal protein L4chromosome CDS3436065 606 - 0.529703
rplE SF3340 50S ribosomal protein L5chromosome CDS3431283 540 - 0.496296
rplF SF3337 50S ribosomal protein L6chromosome CDS3429991 534 - 0.524345
rplI SF4356 50S ribosomal protein L9chromosome CDS4530386 450 + 0.497778
rplJ SF4058 50S ribosomal protein L10chromosome CDS4199750 498 + 0.524096
rplK SF4056 50S ribosomal protein L11chromosome CDS4198200 429 + 0.519814
rplL SF4059 50S ribosomal protein L7/L12chromosome CDS4200314 366 + 0.461749
rplM SF3271 50S ribosomal protein L13chromosome CDS3366096 429 - 0.503497
rplN SF3342 50S ribosomal protein L14chromosome CDS3432162 372 - 0.510753
rplO SF3333 50S ribosomal protein L15chromosome CDS3428489 435 - 0.535632
rplP SF3345 50S ribosomal protein L16chromosome CDS3433143 411 - 0.520681
rplQ SF3326 50S ribosomal protein L17chromosome CDS3424000 384 - 0.536458
rplR SF3336 50S ribosomal protein L18chromosome CDS3429628 354 - 0.536723
rplS SF2666 50S ribosomal protein L19chromosome CDS2742835 348 - 0.482759
rplT SF1515 50S ribosomal protein L20chromosome CDS1547259 357 + 0.481793
rplU SF3226 50S ribosomal protein L21chromosome CDS3325323 312 - 0.483974
rplV SF3347 50S ribosomal protein L22chromosome CDS3434285 333 - 0.495495
rplW SF3350 50S ribosomal protein L23chromosome CDS3435766 303 - 0.481848
rplX SF3341 50S ribosomal protein L24chromosome CDS3431837 315 - 0.460317
rplY SF2272 50S ribosomal protein L25chromosome CDS2305721 285 + 0.498246
rpmA SF3225 50S ribosomal protein L27chromosome CDS3325045 258 - 0.496124
rpmB SF3676 50S ribosomal protein L28chromosome CDS3781752 237 - 0.531646
rpmC SF3344 50S ribosomal protein L29chromosome CDS3432952 192 - 0.536458
rpmD SF3334 50S ribosomal protein L30chromosome CDS3428927 180 - 0.494444
rpmE SF4014 50S ribosomal subunit protein L31chromosome CDS4142091 213 + 0.488263
rpmF SF1093 50S ribosomal protein L32chromosome CDS1135084 174 + 0.54023
rpmG SF3675 50S ribosomal protein L33chromosome CDS3781564 168 - 0.39881
rpmH SF3761 50S ribosomal protein L34chromosome CDS3868283 141 - 0.51773
rpmI SF1514 50S ribosomal protein L35chromosome CDS1547009 198 + 0.494949
rpmJ SF3331 50S ribosomal protein L36chromosome CDS3427002 117 - 0.478632
rpsA SF0907 30S ribosomal protein S1chromosome CDS945786 1674 + 0.510753
rpsB SF0159 30S ribosomal protein S2chromosome CDS180818 726 + 0.511019
rpsC SF3346 30S ribosomal protein S3chromosome CDS3433566 702 - 0.507123
rpsD SF3328 30S ribosomal protein S4chromosome CDS3425439 609 - 0.512315
rpsE SF3335 30S ribosomal protein S5chromosome CDS3429110 504 - 0.498016
rpsF SF4354 30S ribosomal protein S6chromosome CDS4529396 396 + 0.527778
rpsG SF3359 30S ribosomal protein S7chromosome CDS3442889 471 - 0.496815
rpsH SF3338 30S ribosomal protein S8chromosome CDS3430537 393 - 0.501272
rpsI SF3270 30S ribosomal protein S9chromosome CDS3365688 393 - 0.521628
rpsJ SF3353 30S ribosomal protein S10chromosome CDS3437343 312 - 0.554487
rpsK SF3329 30S ribosomal protein S11chromosome CDS3426093 390 - 0.515385
rpsL SF3360 30S ribosomal protein S12chromosome CDS3443456 375 - 0.533333
rpsM SF3330 30S ribosomal protein S13chromosome CDS3426499 357 - 0.518207
rpsN SF3339 30S ribosomal protein S14chromosome CDS3430963 306 - 0.526144
rpsO SF3206 30S ribosomal protein S15chromosome CDS3303622 270 - 0.514815
rpsP SF2669 30S ribosomal protein S16chromosome CDS2744589 249 - 0.514056
rpsQ SF3343 30S ribosomal protein S17chromosome CDS3432698 255 - 0.47451
rpsR SF4355 30S ribosomal protein S18chromosome CDS4530117 228 + 0.526316
rpsS SF3348 30S ribosomal protein S19chromosome CDS3434632 279 - 0.491039
rpsT SF0020 30S ribosomal subunit protein S20chromosome CDS19770 186 - 0.473118
rpsU SF3106 30S ribosomal protein S21chromosome CDS3199819 216 + 0.518519
rsmC SF4402 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4573541 1032 - 0.546512
rsuA SF2270 16S pseudouridylate 516 synthasechromosome CDS2302991 696 - 0.533046
rumA SF2798 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2872685 1302 - 0.514593
selB SF3628 selenocysteinyl-tRNA-specific translation factorchromosome CDS3732314 1845 - 0.56206
serS SF0852 seryl-tRNA synthetasechromosome CDS890834 1293 + 0.527456
sfhB SF2653 ftsH mutation suppressorchromosome CDS2729698 981 + 0.529052
smpA SF2676 small membrane protein Achromosome CDS2752334 153 + 0.470588
spoU SF3691 putative RNA methylasechromosome CDS3794831 690 + 0.552174
srmB SF2638 ATP-dependent RNA helicasechromosome CDS2710111 1335 + 0.549064
sun SF3320 hypothetical proteinchromosome CDS3418032 1290 + 0.5
tgt SF0343 queuine tRNA-ribosyltransferasechromosome CDS355635 1128 + 0.507092
thrS SF1512 threonyl-tRNA synthetasechromosome CDS1544438 1929 + 0.498186
trmA SF4047 tRNA (uracil-5-)-methyltransferasechromosome CDS4182182 1101 - 0.510445
trmD SF2667 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2743224 768 - 0.532552
trpS SF3402 tryptophanyl-tRNA synthetasechromosome CDS3481842 1005 - 0.520398
truA SF2394 tRNA pseudouridine synthase Achromosome CDS2442936 813 - 0.555966
truB SF3207 tRNA pseudouridine synthase Bchromosome CDS3304040 945 - 0.520635
tsf SF0160 elongation factor Tschromosome CDS181801 852 + 0.496479
tuf SF4053 elongation factor Tuchromosome CDS4195697 1185 + 0.533333
tuf SF3357 elongation factor Tuchromosome CDS3439423 1185 - 0.534177
tyrS SF1662 tyrosyl-tRNA synthetasechromosome CDS1692714 1275 - 0.518431
valS SF4231 valyl-tRNA synthetasechromosome CDS4403734 2856 + 0.547619
yabO SF0053 hypothetical proteinchromosome CDS57645 687 - 0.548763
yadB SF0136 glutamyl-tRNA synthetasechromosome CDS150964 927 - 0.535059
yadP SF0139 hypothetical proteinchromosome CDS153279 540 - 0.559259
yaeJ SF0182 hypothetical proteinchromosome CDS205777 423 + 0.541371
ybfG SF2334 hypothetical proteinchromosome CDS2381200 1551 + 0.513217
ybjF SF0813 23S rRNA (uracil-5-)-methyltransferasechromosome CDS845274 1128 + 0.546986
yceC SF1090 hypothetical proteinchromosome CDS1132657 960 + 0.515625
ycfB SF1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1193851 1152 - 0.537326
ychF SF1206 putative GTP-binding proteinchromosome CDS1253602 1092 - 0.510073
yciH SF1286 hypothetical proteinchromosome CDS1336938 330 + 0.5
yciO SF1270 hypothetical proteinchromosome CDS1320411 657 + 0.494673
yeiP SF2258 elongation factor Pchromosome CDS2288398 828 + 0.507246
yfcB SF2407 putative adenine-specific methylasechromosome CDS2455631 1266 - 0.511848
yfhC SF2606 putative deaminasechromosome CDS2682226 537 - 0.540037
yfiA SF2657 putative yhbH sigma 54 modulatorchromosome CDS2735806 342 + 0.461988
yfiF SF2643 hypothetical proteinchromosome CDS2714532 1038 - 0.563584
yfjA SF2668 16S rRNA-processing proteinchromosome CDS2744022 549 - 0.48816
ygjO SF3124 putative enzymechromosome CDS3224977 1137 - 0.53562
yhaR SF3153 hypothetical proteinchromosome CDS3251227 390 - 0.525641
yhbH SF3243 probable sigma-54 modulation proteinchromosome CDS3338342 288 + 0.444444
yhbY SF3220 hypothetical proteinchromosome CDS3319973 294 + 0.486395
yhdG SF3298 putative dehydrogenasechromosome CDS3397975 843 + 0.520759
yibK SF3645 hypothetical proteinchromosome CDS3753811 474 + 0.550633
yicN SF3798 hypothetical proteinchromosome CDS3909001 480 + 0.51875
yihZ SF3959 D-tyrosyl-tRNA deacylasechromosome CDS4089660 438 + 0.552511
yjbC SF4095 hypothetical proteinchromosome CDS4254103 873 + 0.520046
yjbN SF4156 hypothetical proteinchromosome CDS4327076 1020 - 0.532353
yjeA SF4313 lysyl-tRNA synthetasechromosome CDS4487030 978 + 0.522495
yjeJ SF4299 hypothetical proteinchromosome CDS4476985 870 - 0.454023
yjfH SF4335 hypothetical proteinchromosome CDS4514094 732 + 0.560109
yjgF SF4247 hypothetical proteinchromosome CDS4416166 426 + 0.507042
yjgH SF4242 hypothetical proteinchromosome CDS4413909 396 + 0.474747
yjiI SF4187 RNA 2'-phosphotransferasechromosome CDS4362144 687 - 0.487627
yleA SF0621 hypothetical proteinchromosome CDS656764 1425 + 0.540351
yliG SF0785 hypothetical proteinchromosome CDS820867 1326 - 0.527903
ymfC SF1154 hypothetical proteinchromosome CDS1195482 624 - 0.516026
ymjA SF1300 hypothetical proteinchromosome CDS1351695 246 - 0.48374
yohI SF2225 putative regulator proteinchromosome CDS2252261 948 - 0.543249
yqcB SF2804 hypothetical proteinchromosome CDS2882002 783 - 0.535121
yrdC SF3314 hypothetical proteinchromosome CDS3413633 573 - 0.52356
yrfH SF3418 hypothetical proteinchromosome CDS3498563 402 + 0.532338
 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_1420 hypothetical proteinchromosome CDS1467115 393 - 0.506361
NA SFV_1022 hypothetical proteinchromosome CDS1068417 387 - 0.537468
NA SFV_2580 putative ATP synthase beta subunitchromosome CDS2643113 741 - 0.547908
NA SFV_0235 putative terminasechromosome CDS258523 333 + 0.501502
alaS SFV_2808 alanyl-tRNA synthetasechromosome CDS2875187 2631 + 0.537058
ansB SFV_3015 periplasmic L-asparaginase IIchromosome CDS3079572 1047 - 0.524355
argS SFV_1914 arginine tRNA synthetasechromosome CDS1960671 1734 + 0.528835
asnS SFV_0932 asparagine tRNA synthetasechromosome CDS979746 1401 - 0.528194
cafA SFV_3273 bundles of cytoplasmic filamentschromosome CDS3346575 1470 - 0.521088
cca SFV_3096 tRNA nucleotidyl transferasechromosome CDS3162867 1239 + 0.56255
cysS SFV_0484 cysteine tRNA synthetasechromosome CDS510762 1314 + 0.553272
dbpA SFV_1815 ATP-dependent RNA helicasechromosome CDS1862318 1368 - 0.515351
deaD SFV_3192 inducible ATP-independent RNA helicasechromosome CDS3261835 1956 - 0.553681
def SFV_3306 peptide deformylasechromosome CDS3378398 510 + 0.462745
efp SFV_4305 elongation factor P (EF-P)chromosome CDS4448680 567 + 0.497355
fmt SFV_3307 methionyl-tRNA formyltransferasechromosome CDS3378922 948 + 0.525316
frr SFV_0155 ribosome releasing factorchromosome CDS183475 558 + 0.508961
ftsJ SFV_3209 cell division proteinchromosome CDS3282875 630 - 0.501587
fusA SFV_3345 GTP-binding protein chain elongation factor EF-Gchromosome CDS3402561 2115 - 0.508274
glnS SFV_0651 glutamine tRNA synthetasechromosome CDS688446 1665 - 0.524324
gltX SFV_2455 glutamate tRNA synthetase, catalytic subunitchromosome CDS2514377 1416 - 0.525424
glyQ SFV_3981 glycine tRNA synthetase, alpha subunitchromosome CDS4085101 912 + 0.558114
glyS SFV_3982 glycine tRNA synthetase, beta subunitchromosome CDS4086022 2070 + 0.557005
gshB SFV_3001 glutathione synthetasechromosome CDS3068749 951 + 0.535226
hemK SFV_1226 possible protoporphyrinogen oxidasechromosome CDS1275697 834 + 0.551559
hisS SFV_2561 histidine tRNA synthetasechromosome CDS2624496 1245 - 0.543775
ileS SFV_0020 isoleucine tRNA synthetasechromosome CDS21460 2769 + 0.556157
infA SFV_0875 protein chain initiation factor IF-1chromosome CDS911690 219 - 0.484018
infB SFV_3198 protein chain initiation factor IF-2chromosome CDS3269206 2649 - 0.534164
infC SFV_1505 protein chain initiation factor IF-3chromosome CDS1547062 435 + 0.473563
iucB SFV_3853 siderophore biosynthesis proteinchromosome CDS3953563 948 - 0.564346
ksgA SFV_0045 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferasechromosome CDS50595 822 - 0.53528
leuS SFV_0684 leucine tRNA synthetasechromosome CDS720130 2676 + 0.532885
lysS SFV_2938 lysine tRNA synthetasechromosome CDS3006176 1518 - 0.528986
map SFV_0151 methionine aminopeptidasechromosome CDS179315 756 - 0.511905
miaA SFV_4329 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4471969 906 + 0.539735
pcnB SFV_0128 poly(A) polymerase Ichromosome CDS149182 1365 - 0.556777
pheS SFV_1509 phenylalanine tRNA synthetase, alpha-subunitchromosome CDS1548649 984 + 0.54065
pnp SFV_3194 Polyribonucleotide nucleotidyltransferasechromosome CDS3264897 2136 - 0.538858
prfA SFV_1225 peptide chain release factor RF-1chromosome CDS1274615 1083 + 0.530009
prfB SFV_2939 chromosome pseudo3007703 1099 - 0.532302
prfC SFV_4409 peptide chain release factor RF-3chromosome CDS4543357 1590 + 0.536478
prmA SFV_3284 methylase for 50S ribosomal subunit protein L11chromosome CDS3359301 882 + 0.544218
proS SFV_0178 proline tRNA synthetasechromosome CDS207615 1644 - 0.543187
pth SFV_1218 peptidyl-tRNA hydrolasechromosome CDS1267532 585 - 0.502564
queA SFV_0370 probably S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS388609 1071 + 0.538749
rbfA SFV_3197 ribosome-binding factor Achromosome CDS3268641 402 - 0.529851
rhlB SFV_3724 putative ATP-dependent RNA helicasechromosome CDS3808688 1266 + 0.522907
rhlE SFV_0780 putative ATP-dependent RNA helicasechromosome CDS809679 1221 + 0.554464
rimJ SFV_1088 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5chromosome CDS1131392 585 + 0.495726
rimK SFV_0837 ribosomal protein S6 modification proteinchromosome CDS873377 903 + 0.555925
rimL SFV_1779 Ribosomal-protein-serine acetyltransferasechromosome CDS1819805 537 - 0.441341
rnd SFV_1425 RNase D, processes tRNA precursorchromosome CDS1472835 1128 + 0.539894
rne SFV_1106 RNase Echromosome CDS1146976 3186 - 0.558694
rnpA SFV_3808 ribonuclease Pchromosome CDS3902033 327 - 0.562691
rph SFV_3887 RNase PHchromosome CDS3991523 717 + 0.563459
rplA SFV_4056 50S ribosomal subunit protein L1chromosome CDS4169816 705 + 0.513475
rplB SFV_3336 50S ribosomal subunit protein L2chromosome CDS3396810 822 - 0.526764
rplC SFV_3339 50S ribosomal subunit protein L3chromosome CDS3398564 630 - 0.514286
rplD SFV_3338 50S ribosomal subunit protein L4chromosome CDS3397948 606 - 0.529703
rplE SFV_3328 50S ribosomal subunit protein L5chromosome CDS3393166 540 - 0.498148
rplF SFV_3325 50S ribosomal subunit protein L6chromosome CDS3391874 534 - 0.524345
rplI SFV_4358 50S ribosomal subunit protein L9chromosome CDS4497462 450 + 0.497778
rplJ SFV_4057 50S ribosomal subunit protein L10chromosome CDS4170933 498 + 0.522088
rplK SFV_4055 50S ribosomal subunit protein L11chromosome CDS4169384 429 + 0.519814
rplL SFV_4058 50S ribosomal subunit protein L7/L12chromosome CDS4171497 366 + 0.461749
rplM SFV_3258 50S ribosomal subunit protein L13chromosome CDS3328753 483 - 0.488613
rplN SFV_3330 50S ribosomal subunit protein L14chromosome CDS3394045 372 - 0.510753
rplO SFV_3321 50S ribosomal subunit protein L15chromosome CDS3390372 435 - 0.535632
rplP SFV_3333 50S ribosomal subunit protein L16chromosome CDS3395026 411 - 0.518248
rplQ SFV_3314 50S ribosomal subunit protein L17chromosome CDS3385883 384 - 0.536458
rplR SFV_3324 50S ribosomal subunit protein L18chromosome CDS3391511 354 - 0.536723
rplS SFV_2864 50S ribosomal subunit protein L19chromosome CDS2926067 348 + 0.482759
rplT SFV_1507 50S ribosomal subunit protein L20, and regulatorchromosome CDS1547843 357 + 0.481793
rplU SFV_3216 50S ribosomal subunit protein L21chromosome CDS3288980 312 - 0.483974
rplV SFV_3335 50S ribosomal subunit protein L22chromosome CDS3396168 333 - 0.495495
rplW SFV_3337 50S ribosomal subunit protein L23chromosome CDS3397649 303 - 0.481848
rplX SFV_3329 50S ribosomal subunit protein L24chromosome CDS3393720 315 - 0.463492
rplY SFV_2263 50S ribosomal subunit protein L25chromosome CDS2299342 357 + 0.484594
rpmA SFV_3215 50S ribosomal subunit protein L27chromosome CDS3288702 258 - 0.496124
rpmC SFV_3332 50S ribosomal subunit protein L29chromosome CDS3394835 192 - 0.541667
rpmD SFV_3322 50S ribosomal subunit protein L30chromosome CDS3390810 180 - 0.494444
rpmG SFV_3893 50S ribosomal subunit protein L33chromosome CDS3996656 168 + 0.39881
rpmH SFV_3809 50S ribosomal subunit protein L34chromosome CDS3902409 141 - 0.51773
rpmI SFV_1506 50S ribosomal subunit protein Achromosome CDS1547578 213 + 0.478873
rpmJ SFV_3319 50S ribosomal subunit protein L36chromosome CDS3388885 117 - 0.478632
rpsA SFV_0912 30S ribosomal subunit protein S1chromosome CDS952723 1674 + 0.510753
rpsB SFV_0152 30S ribosomal subunit protein S2chromosome CDS180279 924 + 0.504329
rpsC SFV_3334 30S ribosomal subunit protein S3chromosome CDS3395449 702 - 0.508547
rpsD SFV_3316 30S ribosomal subunit protein S4chromosome CDS3387322 621 - 0.505636
rpsE SFV_3323 30S ribosomal subunit protein S5chromosome CDS3390993 504 - 0.498016
rpsF SFV_4356 30S ribosomal subunit protein S6chromosome CDS4496472 396 + 0.527778
rpsG SFV_3346 30S ribosomal subunit protein S7, initiates assemblychromosome CDS3404703 540 - 0.501852
rpsH SFV_3326 30S ribosomal subunit protein S8, and regulatorchromosome CDS3392420 393 - 0.501272
rpsI SFV_3257 30S ribosomal subunit protein S9chromosome CDS3328345 393 - 0.524173
rpsJ SFV_3340 30S ribosomal subunit protein S10chromosome CDS3399226 312 - 0.554487
rpsK SFV_3317 30S ribosomal subunit protein S11chromosome CDS3387976 390 - 0.515385
rpsL SFV_3347 30S ribosomal subunit protein S12chromosome CDS3405339 375 - 0.533333
rpsM SFV_3318 30S ribosomal subunit protein S13chromosome CDS3388382 357 - 0.518207
rpsN SFV_3327 30S ribosomal subunit protein S14chromosome CDS3392846 306 - 0.526144
rpsO SFV_3195 30S ribosomal subunit protein S15chromosome CDS3267279 270 - 0.514815
rpsP SFV_2861 30S ribosomal subunit protein S16chromosome CDS2924352 309 + 0.511327
rpsQ SFV_3331 30S ribosomal subunit protein S17chromosome CDS3394581 255 - 0.47451
rpsR SFV_4357 30S ribosomal subunit protein S18chromosome CDS4497193 228 + 0.526316
rpsT SFV_0018 30S ribosomal subunit protein S20chromosome CDS19836 264 - 0.458333
rpsU SFV_3105 30S ribosomal subunit protein S21chromosome CDS3171671 216 + 0.518519
rsuA SFV_2261 16S pseudouridylate 516 synthasechromosome CDS2296684 792 - 0.522727
selB SFV_3943 selenocysteinyl-tRNA-specific translation factorchromosome CDS4045504 1845 + 0.562602
serS SFV_0884 serine tRNA synthetasechromosome CDS925005 1293 + 0.527456
sfhB SFV_2658 suppressor of ftsH mutationchromosome CDS2727371 981 + 0.529052
smpA SFV_2854 small membrane protein Achromosome CDS2916763 300 - 0.493333
spoU SFV_3878 putative RNA methylasechromosome CDS3982866 690 - 0.552174
srmB SFV_2639 ATP-dependent RNA helicasechromosome CDS2706591 1335 + 0.549064
sun SFV_3308 hypothetical proteinchromosome CDS3379894 1311 + 0.498093
tgt SFV_0371 tRNA-guanine transglycosylasechromosome CDS389734 1128 + 0.507979
thrS SFV_1504 threonine tRNA synthetasechromosome CDS1545022 1929 + 0.498186
trmA SFV_4038 tRNA (uracil-5-)-methyltransferasechromosome CDS4153366 1101 - 0.509537
trmD SFV_2863 tRNA methyltransferasechromosome CDS2925258 768 + 0.53125
trpS SFV_3389 tryptophan tRNA synthetasechromosome CDS3443764 1005 - 0.520398
truA SFV_2387 pseudouridylate synthase Ichromosome CDS2436833 813 - 0.555966
truB SFV_3196 tRNA pseudouridine 5S synthasechromosome CDS3267697 945 - 0.521693
tsf SFV_0153 protein chain elongation factor EF-Tschromosome CDS181460 852 + 0.496479
tufA SFV_3344 protein chain elongation factor EF-Tuchromosome CDS3401306 1185 - 0.535021
tufB SFV_4052 protein chain elongation factor EF-Tuchromosome CDS4166881 1185 + 0.532489
tyrS SFV_1654 tyrosine tRNA synthetasechromosome CDS1692154 1275 - 0.518431
valS SFV_4235 valine tRNA synthetasechromosome CDS4372316 2856 + 0.547619
yabO SFV_0050 hypothetical proteinchromosome CDS57282 660 - 0.542424
yadB SFV_0129 putative tRNA synthetasechromosome CDS150639 927 - 0.532902
yadP SFV_0133 hypothetical proteinchromosome CDS152954 744 - 0.557796
yaeJ SFV_0175 hypothetical proteinchromosome CDS205437 423 + 0.541371
ybjF SFV_0844 putative enzymechromosome CDS879929 1128 + 0.546986
yceC SFV_1107 hypothetical proteinchromosome CDS1150734 960 + 0.513542
ycfB SFV_1168 hypothetical proteinchromosome CDS1212708 1107 - 0.542909
ychF SFV_1217 putative GTP-binding proteinchromosome CDS1266324 1092 - 0.509158
yciH SFV_1295 hypothetical proteinchromosome CDS1350873 327 + 0.498471
yciL SFV_1281 hypothetical proteinchromosome CDS1335070 873 + 0.542955
yciO SFV_1280 hypothetical proteinchromosome CDS1334313 657 + 0.496195
yeiP SFV_2249 putative elongation factorchromosome CDS2282091 828 + 0.507246
yfcB SFV_2400 putative adenine-specific methylasechromosome CDS2449528 1266 - 0.512638
yfhC SFV_2607 putative deaminasechromosome CDS2677931 504 - 0.549603
yfiA SFV_2873 putative yhbH sigma 54 modulatorchromosome CDS2933102 342 - 0.461988
yfiF SFV_2644 hypothetical proteinchromosome CDS2711012 1038 - 0.564547
yfjA SFV_2862 hypothetical proteinchromosome CDS2924679 549 + 0.48816
ygcA SFV_2672 putative enzymechromosome CDS2745920 1302 + 0.514593
yhaR SFV_3154 hypothetical proteinchromosome CDS3226157 453 - 0.523179
yhbH SFV_3233 probable sigma-54 modulation proteinchromosome CDS3301999 288 + 0.444444
yhbY SFV_3210 hypothetical proteinchromosome CDS3283630 294 + 0.486395
yibK SFV_3925 hypothetical proteinchromosome CDS4025740 474 - 0.550633
yihZ SFV_3612 hypothetical proteinchromosome CDS3691346 438 - 0.552511
yjbC SFV_4100 hypothetical proteinchromosome CDS4226285 873 + 0.520046
yjeA SFV_4314 putative lysyl-tRNA synthetasechromosome CDS4455624 978 + 0.523517
yjeJ SFV_4301 hypothetical proteinchromosome CDS4445570 870 - 0.454023
yjfH SFV_4338 hypothetical proteinchromosome CDS4481947 732 + 0.560109
yjgF SFV_4249 hypothetical proteinchromosome CDS4384787 387 + 0.521964
yjgH SFV_4246 hypothetical proteinchromosome CDS4382407 480 + 0.458333
yjiI SFV_4195 hypothetical proteinchromosome CDS4333588 636 - 0.492138
yjjT SFV_4405 putative enzymechromosome CDS4540612 1032 - 0.546512
yleA SFV_0666 hypothetical proteinchromosome CDS701250 1425 + 0.539649
yliG SFV_0818 hypothetical proteinchromosome CDS856862 1326 - 0.527903
ymfC SFV_1170 hypothetical proteinchromosome CDS1214339 654 - 0.509174
ymjA SFV_1309 hypothetical proteinchromosome CDS1365625 246 - 0.48374
yqcB SFV_2666 hypothetical proteinchromosome CDS2737137 783 + 0.535121
yrdC SFV_3303 hypothetical proteinchromosome CDS3375516 618 - 0.519417
yrfH SFV_3405 hypothetical proteinchromosome CDS3460477 402 + 0.529851
 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_P208 hypothetical proteinpSS_046 CDS182829 288 + 0.395833
NA SSON_2614 putative ATP synthase beta subunitchromosome CDS2765778 738 - 0.547425
NA SSON_1271 hypothetical bacteriophage proteinchromosome CDS1345257 624 + 0.525641
NA SSON_2316 putative transformylasechromosome CDS2443874 1983 + 0.512355
NA SSON_1352 hypothetical proteinchromosome CDS1426399 393 - 0.503817
alaS SSON_2841 alanyl-tRNA synthetasechromosome CDS2980471 2631 - 0.536678
ansA SSON_1388 cytoplasmic L-asparaginase Ichromosome CDS1461663 1017 - 0.511308
ansB SSON_3239 periplasmic L-asparaginase IIchromosome CDS3414394 1047 + 0.527221
argS SSON_1242 arginine tRNA synthetasechromosome CDS1316621 1737 - 0.528497
asnS SSON_0933 asparagine tRNA synthetasechromosome CDS1004729 1401 - 0.528908
aspS SSON_1275 aspartate tRNA synthetasechromosome CDS1349891 1773 + 0.537507
cafA SSON_3388 bundles of cytoplasmic filamentschromosome CDS3569113 1488 - 0.521505
cca SSON_3193 tRNA nucleotidyl transferasechromosome CDS3356139 1239 + 0.560129
cysS SSON_0492 cysteine tRNA synthetasechromosome CDS521289 1386 - 0.541126
dbpA SSON_1788 ATP-dependent RNA helicasechromosome CDS1884246 1374 - 0.515284
deaD SSON_3308 inducible ATP-independent RNA helicasechromosome CDS3482909 1941 - 0.552808
def SSON_3427 peptide deformylasechromosome CDS3606490 510 + 0.466667
efp SSON_4331 elongation factor Pchromosome CDS4602205 567 + 0.499118
fmt SSON_3428 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferasechromosome CDS3607014 948 + 0.531646
frr SSON_0184 ribosome releasing factorchromosome CDS207793 558 + 0.508961
ftsJ SSON_3327 cell division proteinchromosome CDS3506108 630 - 0.504762
fusA SSON_3470 GTP-binding protein chain elongation factor EF-Gchromosome CDS3633399 2115 - 0.508747
glnS SSON_0634 glutamine tRNA synthetasechromosome CDS669030 1665 + 0.530931
gltX SSON_2491 glutamate tRNA synthetase, catalytic subunitchromosome CDS2631843 1416 - 0.526836
glyQ SSON_3829 glycine tRNA synthetase, alpha subunitchromosome CDS4022085 912 + 0.558114
glyS SSON_3830 glycine tRNA synthetase, beta subunitchromosome CDS4023006 2070 + 0.553623
gshB SSON_3101 glutathione synthetasechromosome CDS3263604 951 + 0.534175
hemK SSON_1966 possible protoporphyrinogen oxidasechromosome CDS2067829 834 - 0.547962
hisS SSON_2596 histidine tRNA synthetasechromosome CDS2742843 1275 - 0.545098
ileS SSON_0031 isoleucine tRNA synthetasechromosome CDS29557 2817 + 0.555556
infA SSON_0885 protein chain initiation factor IF-1chromosome CDS940044 219 - 0.484018
infB SSON_3314 protein chain initiation factor IF-2chromosome CDS3490280 2673 - 0.534605
infC SSON_1440 protein chain initiation factor IF-3chromosome CDS1516127 435 + 0.478161
iucB SSON_3602 siderophore biosynthesis proteinchromosome CDS3769275 948 + 0.564346
ksgA SSON_0059 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferasechromosome CDS60945 822 - 0.53163
lasT SSON_4553 hypothetical proteinchromosome CDS4824555 687 + 0.502183
leuS SSON_0596 leucine tRNA synthetasechromosome CDS633484 2583 - 0.532714
lysS SSON_3043 lysine tRNA synthetase, constitutivechromosome CDS3203463 1518 - 0.529644
lysU SSON_4306 lysine tRNA synthetase, induciblechromosome CDS4573626 1518 - 0.47365
map SSON_0180 methionine aminopeptidasechromosome CDS203633 795 - 0.509434
miaA SSON_4356 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS4626100 951 + 0.535226
ospD1 SSO_P022 OspD1pSS_046 CDS16954 678 + 0.358407
pcnB SSON_0155 poly(A) polymerase Ichromosome CDS171926 1365 - 0.562637
pheS SSON_1444 phenylalanine tRNA synthetase, alpha-subunitchromosome CDS1517714 984 + 0.539634
pnp SSON_3310 polynucleotide phosphorylasechromosome CDS3485971 2205 - 0.533787
prfA SSON_1967 peptide chain release factor RF-1chromosome CDS2068662 1083 - 0.528163
prfC SSON_4525 peptide chain release factor RF-3chromosome CDS4794002 1590 + 0.536478
prfH SSON_0278 probable peptide chain release factorchromosome CDS306456 501 + 0.536926
prmA SSON_3400 methylase for 50S ribosomal subunit protein L11chromosome CDS3581857 882 + 0.543084
proS SSON_0208 proline tRNA synthetasechromosome CDS233370 1719 - 0.544503
pth SSON_1974 peptidyl-tRNA hydrolasechromosome CDS2076241 585 + 0.497436
queA SSON_0382 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS410105 1071 + 0.54155
rbfA SSON_3313 ribosome-binding factor Achromosome CDS3489715 402 - 0.529851
rhlB SSON_3951 putative ATP-dependent RNA helicasechromosome CDS4175055 1266 - 0.520537
rhlE SSON_0776 putative ATP-dependent RNA helicasechromosome CDS819742 1365 + 0.5663
rimJ SSON_1086 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5chromosome CDS1166867 585 + 0.494017
rimK SSON_0837 ribosomal protein S6 modification proteinchromosome CDS888767 903 + 0.560354
rimL SSON_1715 acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferasechromosome CDS1818350 537 - 0.441341
rmf SSON_0957 ribosome modulation factorchromosome CDS1033808 168 + 0.541667
rna SSON_0563 RNase Ichromosome CDS603200 807 - 0.511772
rnd SSON_1357 RNase Dchromosome CDS1432119 1128 + 0.539894
rne SSON_1104 RNase Echromosome CDS1182473 3186 - 0.556497
rnpA SSON_3654 RNase P, protein componentchromosome CDS3825404 360 + 0.558333
rph SSON_3763 RNase PHchromosome CDS3950555 717 + 0.566248
rplA SSON_4157 50S ribosomal subunit protein L1chromosome CDS4398010 705 + 0.51773
rplB SSON_3458 50S ribosomal subunit protein L2chromosome CDS3623341 822 - 0.526764
rplC SSON_3461 50S ribosomal subunit protein L3chromosome CDS3625095 630 - 0.515873
rplD SSON_3460 50S ribosomal subunit protein L4chromosome CDS3624479 606 - 0.529703
rplE SSON_3449 50S ribosomal subunit protein L5chromosome CDS3619699 540 - 0.496296
rplF SSON_3446 50S ribosomal subunit protein L6chromosome CDS3618407 534 - 0.518727
rplI SSON_4386 50S ribosomal subunit protein L9chromosome CDS4651991 450 + 0.5
rplJ SSON_4158 50S ribosomal subunit protein L10chromosome CDS4399127 498 + 0.522088
rplK SSON_4156 50S ribosomal subunit protein L11chromosome CDS4397578 429 + 0.519814
rplL SSON_4159 50S ribosomal subunit protein L7/L12chromosome CDS4399691 366 + 0.461749
rplM SSON_3372 50S ribosomal subunit protein L13chromosome CDS3549916 429 - 0.501166
rplN SSON_3451 50S ribosomal subunit protein L14chromosome CDS3620578 372 - 0.510753
rplO SSON_3442 50S ribosomal subunit protein L15chromosome CDS3616905 435 - 0.537931
rplP SSON_3454 50S ribosomal subunit protein L16chromosome CDS3621557 411 - 0.518248
rplQ SSON_3435 50S ribosomal subunit protein L17chromosome CDS3612416 384 - 0.533854
rplR SSON_3445 50S ribosomal subunit protein L18chromosome CDS3618044 354 - 0.533898
rplS SSON_2763 50S ribosomal subunit protein L19chromosome CDS2916521 348 - 0.479885
rplT SSON_1442 50S ribosomal subunit protein L20chromosome CDS1516908 357 + 0.484594
rplU SSON_3334 50S ribosomal subunit protein L21chromosome CDS3512213 312 - 0.483974
rplV SSON_3456 50S ribosomal subunit protein L22chromosome CDS3622699 333 - 0.498498
rplW SSON_3459 50S ribosomal subunit protein L23chromosome CDS3624180 303 - 0.481848
rplX SSON_3450 50S ribosomal subunit protein L24chromosome CDS3620253 315 - 0.463492
rplY SSON_2241 50S ribosomal subunit protein L25chromosome CDS2355245 285 + 0.505263
rpmA SSON_3333 50S ribosomal subunit protein L27chromosome CDS3511935 258 - 0.5
rpmB SSON_3770 50S ribosomal subunit protein L28chromosome CDS3956208 237 + 0.527426
rpmC SSON_3453 50S ribosomal subunit protein L29chromosome CDS3621366 192 - 0.541667
rpmD SSON_3443 50S ribosomal subunit protein L30chromosome CDS3617343 180 - 0.5
rpmE SSON_4105 50S ribosomal subunit protein L31chromosome CDS4341053 213 + 0.492958
rpmF SSON_1109 50S ribosomal subunit protein L32chromosome CDS1188658 174 + 0.54023
rpmG SSON_3771 50S ribosomal subunit protein L33chromosome CDS3956465 168 + 0.404762
rpmH SSON_3653 50S ribosomal subunit protein L34chromosome CDS3825247 141 + 0.51773
rpmI SSON_1441 50S ribosomal subunit protein Achromosome CDS1516658 198 + 0.5
rpmJ SSON_3440 50S ribosomal subunit protein L36chromosome CDS3615418 117 - 0.478632
rpsA SSON_0913 30S ribosomal subunit protein S1chromosome CDS977703 1674 + 0.509558
rpsB SSON_0181 30S ribosomal subunit protein S2chromosome CDS204795 726 + 0.512397
rpsC SSON_3455 30S ribosomal subunit protein S3chromosome CDS3621980 702 - 0.507123
rpsD SSON_3437 30S ribosomal subunit protein S4chromosome CDS3613855 621 - 0.507246
rpsE SSON_3444 30S ribosomal subunit protein S5chromosome CDS3617526 504 - 0.5
rpsF SSON_4383 30S ribosomal subunit protein S6chromosome CDS4651001 396 + 0.527778
rpsG SSON_3471 30S ribosomal subunit protein S7chromosome CDS3635610 471 - 0.494692
rpsH SSON_3447 30S ribosomal subunit protein S8chromosome CDS3618953 393 - 0.501272
rpsI SSON_3371 30S ribosomal subunit protein S9chromosome CDS3549508 393 - 0.521628
rpsJ SSON_3462 30S ribosomal subunit protein S10chromosome CDS3625757 312 - 0.554487
rpsK SSON_3438 30S ribosomal subunit protein S11chromosome CDS3614509 390 - 0.515385
rpsL SSON_3472 30S ribosomal subunit protein S12chromosome CDS3636177 375 - 0.533333
rpsM SSON_3439 30S ribosomal subunit protein S13chromosome CDS3614915 357 - 0.518207
rpsN SSON_3448 30S ribosomal subunit protein S14chromosome CDS3619379 306 - 0.529412
rpsO SSON_3311 30S ribosomal subunit protein S15chromosome CDS3488353 270 - 0.518519
rpsP SSON_2766 30S ribosomal subunit protein S16chromosome CDS2918275 249 - 0.514056
rpsQ SSON_3452 30S ribosomal subunit protein S17chromosome CDS3621112 255 - 0.47451
rpsR SSON_4385 30S ribosomal subunit protein S18chromosome CDS4651722 228 + 0.526316
rpsS SSON_3457 30S ribosomal subunit protein S19chromosome CDS3623046 279 - 0.494624
rpsT SSON_0028 30S ribosomal subunit protein S20chromosome CDS27981 264 - 0.465909
rpsU SSON_3202 30S ribosomal subunit protein S21chromosome CDS3365012 216 + 0.518519
rsuA SSON_2239 16S pseudouridylate 516 synthasechromosome CDS2352515 696 - 0.530172
selB SSON_3818 selenocysteinyl-tRNA-specific translation factorchromosome CDS4011373 1845 + 0.566396
serS SSON_0894 serine tRNA synthetasechromosome CDS953321 1293 + 0.528229
sfhB SSON_2720 suppressor of ftsH mutationchromosome CDS2881287 981 - 0.529052
shiE SSON_3599 hypothetical proteinchromosome CDS3765345 504 + 0.361111
smpA SSON_2773 small membrane protein Achromosome CDS2925985 300 + 0.496667
spoU SSON_3754 putative RNA methylasechromosome CDS3941897 690 - 0.552174
srmB SSON_2702 ATP-dependent RNA helicasechromosome CDS2859229 1335 + 0.549064
sun SSON_3429 hypothetical proteinchromosome CDS3608007 1290 + 0.5
tgt SSON_0383 tRNA-guanine transglycosylasechromosome CDS411231 1128 + 0.511525
thrS SSON_1439 threonine tRNA synthetasechromosome CDS1514087 1929 + 0.497667
trmA SSON_4138 tRNA (uracil-5-)-methyltransferasechromosome CDS4381555 1101 - 0.509537
trmD SSON_2764 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferasechromosome CDS2916910 768 - 0.532552
trpS SSON_3515 tryptophan tRNA synthetasechromosome CDS3675281 1005 - 0.519403
truA SSON_2376 pseudouridylate synthase Ichromosome CDS2506592 813 - 0.554736
truB SSON_3312 tRNA pseudouridine 5S synthasechromosome CDS3488771 945 - 0.52381
tsf SSON_0182 protein chain elongation factor EF-Tschromosome CDS205778 852 + 0.5
tufA SSON_3469 protein chain elongation factor EF-Tuchromosome CDS3632144 1185 - 0.531646
tufB SSON_4153 protein chain elongation factor EF-Tuchromosome CDS4395075 1185 + 0.531646
tyrS SSON_1519 tyrosine tRNA synthetasechromosome CDS1594692 1275 + 0.520784
valS SSON_4443 valine tRNA synthetasechromosome CDS4711534 2856 - 0.55112
yabO SSON_0064 hypothetical proteinchromosome CDS67632 660 - 0.543939
yadB SSON_0156 putative tRNA synthetasechromosome CDS173383 927 - 0.530744
yadP SSON_0159 hypothetical proteinchromosome CDS175698 540 - 0.561111
ybjF SSON_0844 putative enzymechromosome CDS895318 1128 + 0.545213
yceC SSON_1106 hypothetical proteinchromosome CDS1186231 960 + 0.515625
ycfB SSON_1151 hypothetical proteinchromosome CDS1232690 1152 - 0.532118
ychF SSON_1975 putative GTP-binding proteinchromosome CDS2076942 1092 + 0.509158
yciH SSON_1858 hypothetical proteinchromosome CDS1956552 330 - 0.49697
yciL SSON_1874 hypothetical proteinchromosome CDS1972585 873 - 0.544101
yciO SSON_1876 hypothetical proteinchromosome CDS1974812 657 - 0.488584
yeiP SSON_2227 putative elongation factorchromosome CDS2337992 828 + 0.506039
yfcB SSON_2389 putative adenine-specific methylasechromosome CDS2519286 1266 - 0.515008
yfhC SSON_2642 putative deaminasechromosome CDS2801328 537 - 0.543762
yfiA SSON_2748 putative yhbH sigma 54 modulatorchromosome CDS2905058 342 + 0.459064
yfiF SSON_2707 hypothetical proteinchromosome CDS2863824 1038 - 0.564547
yfjA SSON_2765 hypothetical proteinchromosome CDS2917708 558 - 0.491039
ygcA SSON_2942 putative enzymechromosome CDS3083426 1302 - 0.512289
ygjO SSON_3121 putative enzymechromosome CDS3279227 1137 + 0.538259
yhaR SSON_3270 hypothetical proteinchromosome CDS3444426 453 - 0.520971
yhbH SSON_3351 probable sigma-54 modulation proteinchromosome CDS3525247 288 + 0.447917
yhbY SSON_3328 hypothetical proteinchromosome CDS3506863 294 + 0.486395
yhdG SSON_3401 putative dehydrogenasechromosome CDS3583067 966 + 0.522774
yibK SSON_3799 hypothetical proteinchromosome CDS3983775 474 - 0.550633
yicN SSON_3616 hypothetical proteinchromosome CDS3784568 480 - 0.520833
yihZ SSON_4056 hypothetical proteinchromosome CDS4290162 438 + 0.552511
yjbC SSON_4200 hypothetical proteinchromosome CDS4451945 873 + 0.5189
yjbN SSON_4229 hypothetical proteinchromosome CDS4486092 1038 + 0.534682
yjeA SSON_4341 putative lysyl-tRNA synthetasechromosome CDS4609118 1008 + 0.518849
yjeJ SSON_4328 hypothetical proteinchromosome CDS4599099 768 - 0.459635
yjfH SSON_4365 hypothetical proteinchromosome CDS4636124 732 + 0.557377
yjgF SSON_4424 hypothetical proteinchromosome CDS4696980 426 - 0.514085
yjgH SSON_4428 hypothetical proteinchromosome CDS4699267 396 - 0.469697
yjjT SSON_4521 putative enzymechromosome CDS4791257 1032 - 0.553295
yleA SSON_0615 hypothetical proteinchromosome CDS655636 1425 - 0.540351
yliG SSON_0818 hypothetical proteinchromosome CDS872248 1326 - 0.527149
ymfC SSON_1153 hypothetical proteinchromosome CDS1234321 624 - 0.517628
ymjA SSON_1845 hypothetical proteinchromosome CDS1941865 246 + 0.48374
yohI SSON_2196 putative regulator proteinchromosome CDS2302372 948 - 0.53903
yqcB SSON_2948 hypothetical proteinchromosome CDS3092729 783 - 0.537676
yrdC SSON_3423 hypothetical proteinchromosome CDS3603643 573 - 0.527051
yrfH SSON_3531 hypothetical proteinchromosome CDS3691994 402 + 0.532338
 
Sodalis glossinidius str. morsitans, morsitans
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SG1570 ribosomal small subunit pseudouridine synthasechromosome CDS2684206 708 - 0.614407
NA SG0548 tRNA (guanine-N1)-methyltransferasechromosome CDS946488 756 + 0.559524
NA SG1920 prolyl-tRNA synthasechromosome CDS3316106 1725 + 0.582029
NA SG0803 leucyl-tRNA synthasechromosome CDS1355559 2583 - 0.589237
NA SG2266 50S ribosomal protein L5chromosome CDS3924940 540 - 0.501852
NA SG0549 50S ribosomal protein L19chromosome CDS947307 348 + 0.511494
NA SG2274 30S ribosomal protein S19chromosome CDS3928292 279 - 0.508961
NA SG1145 hypothetical proteinchromosome CDS1904225 414 + 0.533816
NA SG1990 peptide chain release factor RF-2chromosome CDS3445796 870 - 0.572414
NA SG0198 putative sigma-54 modulation proteinchromosome CDS378348 288 - 0.461806
NA SG1908 hypothetical proteinchromosome CDS3293766 1104 - 0.617754
NA SG0309 elongation factor Pchromosome CDS555270 567 + 0.534392
NA SG0392 peptide chain release factor RF-3chromosome CDS693195 1590 + 0.566038
NA SG2225 hypothetical proteinchromosome CDS3874675 438 - 0.614155
NA SG1899 spermidine N1-acetyltransferasechromosome CDS3263584 564 + 0.457447
NA SG1942 elongation factor EF-Tschromosome CDS3346636 858 - 0.562937
NA SG0363 50S ribosomal protein L21chromosome CDS657648 312 + 0.49359
NA SG1404 hypothetical proteinchromosome CDS2328852 621 + 0.545894
NA SG2252 50S ribosomal protein L17chromosome CDS3917644 396 - 0.555556
NA SG2277 50S ribosomal protein L4chromosome CDS3929726 606 - 0.537954
NA SG1572 50S ribosomal protein L25chromosome CDS2687000 285 + 0.515789
NA SG1246 ribosomal-protein-alanine acetyltransferasechromosome CDS2105319 579 + 0.53886
NA SG2182 putative RNA methyltransferasechromosome CDS3799514 468 + 0.598291
NA SG0258 tRNA nucleotidyl transferasechromosome CDS473230 1248 - 0.625801
NA SG1801 small protein Achromosome CDS3069862 351 + 0.527066
NA SG2273 50S ribosomal protein L22chromosome CDS3927945 333 - 0.528529
NA SG0344 hypothetical proteinchromosome CDS632503 738 + 0.617886
NA SG0364 50S ribosomal protein L27chromosome CDS657975 258 + 0.531008
NA SG1628 hypothetical proteinchromosome CDS2787074 933 - 0.576635
NA SG0683 50S ribosomal protein L36chromosome CDS1155621 141 - 0.524823
NA SG0151 ribosomal protein L11 methyltransferasechromosome CDS269215 882 - 0.605442
NA SG0131 50S ribosomal protein L1chromosome CDS215314 705 + 0.568794
NA SG2260 50S ribosomal protein L30chromosome CDS3922583 180 - 0.5
NA SG2388 ATP-dependent RNA helicasechromosome CDS4093442 1248 + 0.563301
NA SG2285 30S ribosomal protein S7chromosome CDS3938495 471 - 0.524416
NA SG0993 30S ribosomal protein S1chromosome CDS1633832 1677 + 0.548002
NA SG0379 tRNA pseudouridine synthase Bchromosome CDS677035 936 + 0.625
NA SG0347 30S ribosomal protein S18chromosome CDS635321 228 + 0.508772
NA SG2213 ribonuclease PHchromosome CDS3845286 720 - 0.586111
NA SG0581 putative sigma-54 modulation proteinchromosome CDS981052 330 - 0.509091
NA SG1015 asparaginyl-tRNA synthasechromosome CDS1677677 1401 - 0.532477
NA SG2262 50S ribosomal protein L18chromosome CDS3923284 354 - 0.533898
NA SG2257 50S ribosomal protein L36chromosome CDS3920656 117 - 0.435897
NA SG2304 tryptophanyl-tRNA synthasechromosome CDS3962539 1005 - 0.548259
NA SG0913 putative ATP-dependent RNA helicasechromosome CDS1480583 1362 + 0.604993
NA SG2267 50S ribosomal protein L24chromosome CDS3925494 315 - 0.473016
NA SG2271 50S ribosomal protein L16chromosome CDS3926806 411 - 0.501217
NA SG1989 lysyl-tRNA synthasechromosome CDS3444266 1521 - 0.566732
NA SG2286 30S ribosomal protein S12chromosome CDS3939059 375 - 0.568
NA SG2315 heat shock proteinchromosome CDS3978132 423 + 0.58156
NA SG2276 50S ribosomal protein L23chromosome CDS3929427 303 - 0.488449
NA SG0389 ribosomal RNA small subunit methyltransferase Cchromosome CDS691083 1053 - 0.598291
NA SG0412 30S ribosomal protein S20chromosome CDS730972 264 - 0.496212
NA SG1419 threonyl-tRNA synthasechromosome CDS2374147 1929 + 0.524106
NA SG0934 hypothetical proteinchromosome CDS1527702 435 + 0.468966
NA SG1257 aspartyl-tRNA synthasechromosome CDS2118124 1791 + 0.582356
NA SG0130 50S ribosomal protein L11chromosome CDS214882 429 + 0.559441
NA SG1882 hypothetical proteinchromosome CDS3218344 1092 + 0.554029
NA SG0546 30S ribosomal protein S16chromosome CDS945634 249 + 0.53012
NA SG2111 valyl-tRNA synthasechromosome CDS3652613 2856 + 0.585084
NA SG0705 cysteinyl-tRNA synthasechromosome CDS1186256 1374 + 0.569869
NA SG2431 ribonuclease P proteinchromosome CDS4169990 360 - 0.552778
NA SG1405 putative pseudouridine synthasechromosome CDS2329960 894 + 0.58613
NA SG2117 hypothetical proteinchromosome CDS3660418 387 + 0.552972
NA SG0509 putative RNA methyltransferasechromosome CDS890088 789 + 0.623574
NA SG2269 30S ribosomal protein S17chromosome CDS3926361 255 - 0.47451
NA SG1876 peptide chain release factor RF-1chromosome CDS3211719 1083 - 0.614958
NA SG0538 alanyl-tRNA synthasechromosome CDS934950 2628 + 0.58828
NA SG0127 elongation factor Tuchromosome CDS212377 1185 + 0.58481
NA SG0310 lysyl-tRNA synthasechromosome CDS557213 978 + 0.562372
NA SG2278 50S ribosomal protein L3chromosome CDS3930348 630 - 0.538095
NA SG2279 30S ribosomal protein S10chromosome CDS3931010 312 - 0.522436
NA SG0011 glycyl-tRNA synthase alpha subunitchromosome CDS22715 915 + 0.567213
NA SG0159 ribonuclease Gchromosome CDS279877 1470 + 0.543537
NA SG0012 glycyl-tRNA synthase beta subunitchromosome CDS23639 2070 + 0.610628
NA SG1965 hypothetical proteinchromosome CDS3387076 414 - 0.533816
NA SG0336 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS622753 939 + 0.578275
NA SG2256 30S ribosomal protein S13chromosome CDS3920152 357 - 0.518207
NA SG2022 glutathione synthasechromosome CDS3485692 957 + 0.562173
NA SG1676 glutamyl-tRNA synthasechromosome CDS2857119 1422 - 0.578762
NA SG2264 30S ribosomal protein S8chromosome CDS3924194 393 - 0.513995
NA SG0217 30S ribosomal protein S9chromosome CDS394869 393 + 0.564885
NA SG2284 elongation factor Gchromosome CDS3936295 2106 - 0.555556
NA SG0491 putative glutamyl-tRNA synthasechromosome CDS848842 624 - 0.623397
NA SG2270 50S ribosomal protein L29chromosome CDS3926615 192 - 0.541667
NA SG1422 phenylalanyl-tRNA synthase alpha subunitchromosome CDS2377608 984 + 0.555894
NA SG0547 16S rRNA processing protein RimMchromosome CDS945892 558 + 0.539427
NA SG2275 50S ribosomal protein L2chromosome CDS3928587 822 - 0.540146
NA SG1843 putative formyl transferasechromosome CDS3127604 1983 - 0.568331
NA SG1420 50S ribosomal protein L35chromosome CDS2376694 198 + 0.50505
NA SG2259 50S ribosomal protein L15chromosome CDS3922145 435 - 0.565517
NA SG2272 30S ribosomal protein S3chromosome CDS3927229 699 - 0.529328
NA SG1103 translation initiation factor IF-1chromosome CDS1826194 219 - 0.520548
NA SG2268 50S ribosomal protein L14chromosome CDS3925819 372 - 0.505376
NA SG0377 translation initiation factor IF-2chromosome CDS673866 2685 + 0.580633
NA SG0811 putative tRNA-thiotransferasechromosome CDS1367519 1425 - 0.560702
NA SG2261 30S ribosomal protein S5chromosome CDS3922769 501 - 0.53493
NA SG0133 50S ribosomal subunit protein L7/L12chromosome CDS216889 369 + 0.523035
NA SG0424 dimethyladenosine transferasechromosome CDS746161 819 - 0.58486
NA SG1111 seryl-tRNA synthasechromosome CDS1838857 1293 + 0.5785
NA SG0383 inducible ATP-independent RNA helicasechromosome CDS681911 1884 + 0.605096
NA SG1940 ribosome recycling factorchromosome CDS3345163 558 - 0.571685
NA SGP1_0004 hypothetical proteinpSG1 CDS8876 207 + 0.42029
NA SG2207 50S ribosomal protein L33chromosome CDS3839459 168 - 0.422619
NA SG2432 50S ribosomal protein L34chromosome CDS4170367 144 - 0.520833
NA SG1333 ribonuclease Dchromosome CDS2216037 1143 + 0.587927
NA SG1052 ribonuclease Echromosome CDS1753709 3564 - 0.613917
NA SG0622 putative translation initiation inhibitorchromosome CDS1060218 399 - 0.573935
NA SG1780 hypothetical proteinchromosome CDS3042979 510 - 0.631373
NA SG1944 methionine aminopeptidasechromosome CDS3348679 795 + 0.542138
NA SG0429 ribosomal large subunit pseudouridine synthase Achromosome CDS752705 654 - 0.605505
NA SG0345 30S ribosomal protein S6chromosome CDS634597 396 + 0.522727
NA SG1421 50S ribosomal protein L20chromosome CDS2376936 357 + 0.52381
NA SG0216 50S ribosomal protein L13chromosome CDS394425 429 + 0.517483
NA SG0253 30S ribosomal protein S21chromosome CDS469332 216 - 0.541667
NA SG1085 tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferasechromosome CDS1793944 1110 - 0.577477
NA SG2283 elongation factor Tuchromosome CDS3935038 1185 - 0.581435
NA SG2255 30S ribosomal protein S11chromosome CDS3919746 390 - 0.520513
NA SG0370 cell division proteinchromosome CDS665796 630 + 0.552381
NA SG1056 50S ribosomal protein L32chromosome CDS1760063 171 + 0.549708
NA SG0380 30S ribosomal protein S15chromosome CDS678088 270 + 0.503704
NA SG1619 pseudouridylate synthase Ichromosome CDS2774911 816 - 0.616422
NA SG1875 putative protoporphyrinogen oxidasechromosome CDS3210871 849 - 0.657244
NA SG2165 50S ribosomal protein L31chromosome CDS3774528 216 - 0.476852
NA SG0132 50S ribosomal protein L10chromosome CDS216325 498 + 0.536145
NA SG1248 arginyl-tRNA synthasechromosome CDS2108895 1731 - 0.579434
NA SG0645 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1106618 1062 + 0.590395
NA SG0381 polyribonucleotide nucleotidyltransferasechromosome CDS678612 2118 + 0.584042
NA SG0414 isoleucyl-tRNA synthasechromosome CDS732585 2817 + 0.596379
NA SG2263 50S ribosomal protein L6chromosome CDS3923647 534 - 0.522472
NA SG0583 ribosomal large subunit pseudouridine synthase Dchromosome CDS982485 981 + 0.569827
NA SG2254 30S ribosomal protein S4chromosome CDS3919095 621 - 0.510467
NA SG1448 tyrosyl-tRNA synthasechromosome CDS2421862 1275 + 0.552941
NA SG1331 hypothetical proteinchromosome CDS2212505 354 - 0.581921
NA SG0646 queuine tRNA-ribosyltransferasechromosome CDS1107880 1149 + 0.51436
NA SG2136 conserced hypothetical proteinchromosome CDS3709410 1032 - 0.559109
NA SG1795 ATP-dependent RNA helicasechromosome CDS3062832 1344 + 0.561012
NA SG0369 hypothetical proteinchromosome CDS665357 294 - 0.510204
NA SG0490 poly(A) polymerase Ichromosome CDS847125 1413 - 0.57891
NA SG1881 peptidyl-tRNA hydrolasechromosome CDS3217645 585 + 0.598291
NA SG2246 polypeptide deformylasechromosome CDS3908041 516 + 0.536822
NA SG1943 30S ribosomal protein S2chromosome CDS3347609 726 - 0.534435
NA SG2243 hypothetical proteinchromosome CDS3904288 573 - 0.589878
NA SG2208 50S ribosomal protein L28chromosome CDS3839643 237 - 0.527426
NA SG2247 methionyl-tRNA formyltransferasechromosome CDS3908578 951 + 0.590957
NA SG0378 ribosome-binding factor Achromosome CDS676619 417 + 0.551559
NA SG2248 putative rRNA methylasechromosome CDS3909600 1302 + 0.61828
NA SG1025 putative ribosome modulation factorchromosome CDS1694663 321 + 0.545171
NA SG1759 histidyl-tRNA synthasechromosome CDS3014059 1275 - 0.608627
NA SG1053 ribosomal large subunit pseudouridine synthase Cchromosome CDS1757803 987 + 0.561297
NA SG0860 glutaminyl-tRNA synthasechromosome CDS1413536 1671 + 0.553561
NA SG2154 tRNA (uracil-5)-methyltransferasechromosome CDS3755605 1113 + 0.564241
NA SG1771 putative RNA methyltransferasechromosome CDS3025889 768 - 0.579427
NA SG0924 ribosomal protein S6 modification proteinchromosome CDS1513196 891 + 0.611672
NA SG2265 30S ribosomal protein S14chromosome CDS3924621 306 - 0.529412
NA SG0348 50S ribosomal protein L9chromosome CDS635587 453 + 0.558499
 
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA WGpWb0002 spermidine acetyltransferasepWb1 CDS1361 525 + 0.253333
alaS WGLp234 hypothetical proteinchromosome CDS275701 2622 - 0.20328
argS WGLp129 hypothetical proteinchromosome CDS149259 1731 + 0.210861
asnS WGLp263 asparaginyl-tRNA synthetasechromosome CDS305690 1401 + 0.242684
aspS WGLp113 hypothetical proteinchromosome CDS122671 1683 + 0.234106
b2255 WGLp160 hypothetical proteinchromosome CDS190415 1965 + 0.21374
cca WGLp238 hypothetical proteinchromosome CDS281667 1212 + 0.221122
cysS WGLp243 hypothetical proteinchromosome CDS286018 1392 - 0.23204
deaD WGLp221 hypothetical proteinchromosome CDS259378 1752 - 0.233447
def WGLp496 hypothetical proteinchromosome CDS573308 459 - 0.228758
efp WGLp287 hypothetical proteinchromosome CDS337818 570 + 0.207018
fmt WGLp495 hypothetical proteinchromosome CDS572299 960 - 0.258333
frr WGLp389 hypothetical proteinchromosome CDS452411 558 - 0.206093
ftsJ WGLp232 hypothetical proteinchromosome CDS274162 612 - 0.227124
fusA WGLp029 hypothetical proteinchromosome CDS35041 2118 + 0.3017
glnS WGLp288 glutaminyl-tRNA synthetasechromosome CDS338486 1650 + 0.228485
gltX WGLp126 hypothetical proteinchromosome CDS143672 1422 - 0.212377
glyQ WGLp593 glycyl-tRNA synthetase alpha subunitchromosome CDS665990 909 + 0.253025
glyS WGLp594 hypothetical proteinchromosome CDS666895 2085 + 0.181775
gshB WGLp166 glutathione synthetasechromosome CDS196754 984 - 0.237805
hemK WGLp344 hypothetical proteinchromosome CDS402235 846 - 0.22695
hisS WGLp574 hypothetical proteinchromosome CDS642902 1299 + 0.212471
ileS WGLp294 hypothetical proteinchromosome CDS344754 2823 - 0.234857
infA WGLp239 hypothetical proteinchromosome CDS282948 219 + 0.260274
infB WGLp226 translation initiation factor IF-2chromosome CDS265136 2526 - 0.228424
infC WGLp082 hypothetical proteinchromosome CDS87700 591 + 0.238579
ksgA WGLp020 hypothetical proteinchromosome CDS24633 786 + 0.207379
leuS WGLp168 hypothetical proteinchromosome CDS198753 2595 + 0.226975
lysS WGLp441 hypothetical proteinchromosome CDS512171 1482 + 0.220648
map WGLp393 hypothetical proteinchromosome CDS455608 792 + 0.257576
metG WGLp536 methionyl-tRNA synthetasechromosome CDS619557 1653 - 0.22686
miaA WGLp183 hypothetical proteinchromosome CDS217960 969 + 0.214654
pheS WGLp085 hypothetical proteinchromosome CDS89116 1002 + 0.229541
pnp WGLp222 hypothetical proteinchromosome CDS261158 2118 - 0.266289
prfA WGLp345 hypothetical proteinchromosome CDS403085 1095 - 0.242009
prfB WGLp440 hypothetical proteinchromosome CDS511256 837 + 0.266428
proS WGLp597 prolyl-tRNA synthetasechromosome CDS672550 1686 + 0.213523
pth WGLp350 peptidyl-tRNA hydrolasechromosome CDS408155 576 + 0.208333
rbfA WGLp225 hypothetical proteinchromosome CDS264696 378 - 0.203704
rluD WGLp535 hypothetical proteinchromosome CDS616722 945 + 0.213757
rne WGLp088 hypothetical proteinchromosome CDS93717 2352 - 0.217687
rplA WGLp519 50S ribosomal protein L1chromosome CDS597181 729 + 0.226337
rplB WGLp546 50S ribosomal protein L2chromosome CDS627747 828 + 0.289855
rplC WGLp543 hypothetical proteinchromosome CDS626166 648 + 0.282407
rplD WGLp544 50S ribosomal protein L4chromosome CDS626825 606 + 0.240924
rplE WGLp555 hypothetical proteinchromosome CDS631643 537 + 0.243948
rplF WGLp558 50S ribosomal protein L6chromosome CDS632926 537 + 0.225326
rplI WGLp260 hypothetical proteinchromosome CDS304074 453 - 0.207506
rplJ WGLp520 hypothetical proteinchromosome CDS597999 486 + 0.205761
rplK WGLp518 hypothetical proteinchromosome CDS596751 429 + 0.289044
rplL WGLp521 hypothetical proteinchromosome CDS598524 372 + 0.241935
rplM WGLp140 50S ribosomal protein L13chromosome CDS165538 429 - 0.237762
rplN WGLp553 hypothetical proteinchromosome CDS630921 372 + 0.303763
rplO WGLp562 hypothetical proteinchromosome CDS634529 435 + 0.232184
rplP WGLp550 50S ribosomal protein L16chromosome CDS629955 411 + 0.318735
rplQ WGLp569 hypothetical proteinchromosome CDS638999 369 + 0.222222
rplR WGLp559 hypothetical proteinchromosome CDS633466 354 + 0.245763
rplS WGLp250 50S ribosomal protein L19chromosome CDS294467 348 + 0.25
rplT WGLp084 50S ribosomal protein L20chromosome CDS88625 354 + 0.259887
rplU WGLp477 hypothetical proteinchromosome CDS551305 312 - 0.214744
rplV WGLp548 hypothetical proteinchromosome CDS628889 336 + 0.276786
rplW WGLp545 hypothetical proteinchromosome CDS627427 306 + 0.163399
rplX WGLp554 hypothetical proteinchromosome CDS631310 315 + 0.222222
rpmA WGLp476 50S ribosomal protein L27chromosome CDS551028 264 - 0.287879
rpmB WGLp403 hypothetical proteinchromosome CDS467680 237 + 0.240506
rpmC WGLp551 hypothetical proteinchromosome CDS630365 207 + 0.241546
rpmD WGLp561 hypothetical proteinchromosome CDS634349 177 + 0.237288
rpmE WGLp279 hypothetical proteinchromosome CDS330158 216 + 0.226852
rpmF WGLp089 hypothetical proteinchromosome CDS97518 180 + 0.266667
rpmG WGLp404 hypothetical proteinchromosome CDS467909 168 + 0.214286
rpmH WGLp014 hypothetical proteinchromosome CDS15893 144 - 0.277778
rpmI WGLp083 hypothetical proteinchromosome CDS88380 201 + 0.218905
rpmJ WGLp564 hypothetical proteinchromosome CDS636330 117 + 0.316239
rpsA WGLp484 30S ribosomal protein S1chromosome CDS559826 1665 - 0.279279
rpsB WGLp392 30S ribosomal protein S2chromosome CDS454650 723 - 0.244813
rpsC WGLp549 hypothetical proteinchromosome CDS629241 711 + 0.293952
rpsD WGLp567 30S ribosomal protein S4chromosome CDS637293 678 + 0.283186
rpsE WGLp560 hypothetical proteinchromosome CDS633838 501 + 0.305389
rpsF WGLp262 30S ribosomal protein S6chromosome CDS304915 342 - 0.24269
rpsG WGLp028 30S ribosomal protein S7chromosome CDS34525 471 + 0.316348
rpsH WGLp557 hypothetical proteinchromosome CDS632514 393 + 0.254453
rpsI WGLp139 hypothetical proteinchromosome CDS165127 390 - 0.266667
rpsJ WGLp542 30S ribosomal protein S10chromosome CDS625817 312 + 0.326923
rpsK WGLp566 30S ribosomal protein S11chromosome CDS636932 396 + 0.335859
rpsL WGLp027 30S ribosomal protein S12chromosome CDS34105 378 + 0.320106
rpsM WGLp565 30S ribosomal protein S13chromosome CDS636557 357 + 0.266106
rpsN WGLp556 hypothetical proteinchromosome CDS632189 306 + 0.320261
rpsO WGLp223 hypothetical proteinchromosome CDS263372 270 - 0.177778
rpsP WGLp249 hypothetical proteinchromosome CDS292923 243 + 0.238683
rpsQ WGLp552 hypothetical proteinchromosome CDS630537 279 + 0.225806
rpsR WGLp261 hypothetical proteinchromosome CDS304569 228 - 0.276316
rpsS WGLp547 hypothetical proteinchromosome CDS628441 429 + 0.275058
rpsT WGLp296 hypothetical proteinchromosome CDS348688 267 + 0.187266
rpsU WGLp470 hypothetical proteinchromosome CDS546067 216 - 0.300926
serS WGLp489 seryl-tRNA synthetasechromosome CDS565684 1290 - 0.235659
thrS WGLp081 hypothetical proteinchromosome CDS85827 1911 + 0.228153
trpS WGLp581 tryptophanyl-tRNA synthetasechromosome CDS650913 1005 + 0.232836
truA WGLp309 hypothetical proteinchromosome CDS365375 795 + 0.227673
truB WGLp224 hypothetical proteinchromosome CDS263762 984 - 0.20122
tsf WGLp391 elongation factor Tschromosome CDS453793 813 - 0.190652
tufA WGLp515 hypothetical proteinchromosome CDS594570 1185 + 0.320675
tyrS WGLp338 hypothetical proteinchromosome CDS396237 1491 + 0.191818
valS WGLp460 hypothetical proteinchromosome CDS533696 2646 + 0.21542
ycfB WGLp104 hypothetical proteinchromosome CDS112153 1107 - 0.241192
ychF WGLp351 hypothetical proteinchromosome CDS408773 1074 + 0.208566
yfcB WGLp409 hypothetical proteinchromosome CDS472134 924 - 0.244589
yfhC WGLp138 hypothetical proteinchromosome CDS164618 456 - 0.225877
yjfH WGLp178 hypothetical proteinchromosome CDS210258 753 - 0.200531
yrdC WGLp497 hypothetical proteinchromosome CDS574031 585 + 0.242735
 
Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YE1849 putative acetyl transferasechromosome CDS2030211 549 + 0.510018
NA YE2480 putative acetyltransferasechromosome CDS2669606 708 - 0.429379
NA YE3891 hypothetical proteinchromosome CDS4251468 1290 + 0.486047
NA YE0426 hypothetical proteinchromosome CDS494702 294 - 0.459184
NA YE1055 putative SpoU-family rRNA methylasechromosome CDS1177057 774 + 0.516796
NA YE3290 hypothetical proteinchromosome CDS3592852 774 - 0.492248
NA YE3108 putative ribosomal protein L36chromosome CDS3382900 144 + 0.451389
NA YE2207 hypothetical proteinchromosome CDS2417906 621 - 0.466989
NA YE1280 hypothetical proteinchromosome CDS1423360 933 + 0.481243
NA YE0083 putative methyltransferasechromosome CDS92213 504 - 0.486111
NA YE3699 putative methyltransferasechromosome CDS4039979 1191 - 0.484467
NA YE1948 hypothetical proteinchromosome CDS2127918 390 - 0.5
NA YE0385 putative methylasechromosome CDS455489 741 + 0.523617
NA YE1441 putative elongation factor Pchromosome CDS1616709 573 - 0.458988
NA YE0032 hypothetical proteinchromosome CDS42225 438 + 0.481735
NA YE1230 putative acetyltransferasechromosome CDS1372113 573 + 0.495637
NA YE3260 hypothetical proteinchromosome CDS3560061 417 - 0.484412
NA YE0997 hypothetical proteinchromosome CDS1118105 351 - 0.461538
NA YE3191 putative methyltransferasechromosome CDS3469636 558 - 0.455197
NA YE2632 hypothetical proteinchromosome CDS2848733 1764 - 0.315193
NA YE2379 hypothetical proteinchromosome CDS2567198 345 + 0.44058
NA YE1974 translation initiation factor SUI1 family proteinchromosome CDS2153934 339 + 0.483776
NA YE2206 putative RNA pseudouridylate synthase-family proteinchromosome CDS2416616 930 - 0.523656
NA YE3885 hypothetical proteinchromosome CDS4246834 573 - 0.465969
NA YE2430 putative protoporphyrinogen oxidasechromosome CDS2620620 855 - 0.506433
NA YE3768 hypothetical proteinchromosome CDS4109020 387 + 0.498708
NA YE1490 putative RNA methyltransferasechromosome CDS1670155 1128 + 0.489362
NA YE3208 hypothetical proteinchromosome CDS3494652 393 - 0.480916
NA YE1030 putative zinc-binding proteinchromosome CDS1148739 486 + 0.534979
NA YE3244 putative trna/rRNA methyltransferasechromosome CDS3537879 1107 - 0.514002
alaS YE0834 alanyl-tRNA synthetasechromosome CDS959487 2628 + 0.478691
ampM YE3285 methionine aminopeptidasechromosome CDS3587074 960 + 0.457292
ams YE1627 ribonuclease Echromosome CDS1830922 3531 - 0.509204
ansA YE2261 L-asparaginase Ichromosome CDS2470810 1017 + 0.468043
ansB YE1535 putative L-asparaginase II precursorchromosome CDS1722858 1038 + 0.475915
argS YE2406 arginyl-tRNA synthetasechromosome CDS2593550 1731 + 0.494512
asnS YE1564 asparaginyl-tRNA synthetasechromosome CDS1759395 1401 - 0.494647
aspS YE2397 aspartyl-tRNA synthetasechromosome CDS2585205 1797 - 0.509182
asuD YE3374 lysyl-tRNA synthetasechromosome CDS3686176 1518 - 0.48419
asuE YE1722 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1921382 1122 - 0.502674
b0023 YE0613 30S ribosomal protein S20chromosome CDS705938 264 - 0.469697
b0026 YE0616 isoleucyl-tRNA synthetasechromosome CDS707585 2817 + 0.505857
b0051 YE0630 dimethyladenosine transferasechromosome CDS722666 819 - 0.478632
b0172 YE3281 ribosome recycling factorchromosome CDS3583299 558 - 0.467742
b4147 YE0357 elongation factor Pchromosome CDS423947 567 + 0.485009
b4155 YE0365 putative lysyl-tRNA synthetasechromosome CDS429789 978 + 0.511247
b4371 YE0561 ribosomal RNA small subunit methyltransferase Cchromosome CDS646301 1044 - 0.517241
b4375 YE0564 peptide chain release factor 3chromosome CDS648533 1590 + 0.492453
cafA YE3801 ribonuclease Gchromosome CDS4147546 1470 - 0.477551
cca YE3677 tRNA nucleotidyltransferasechromosome CDS4011864 1245 + 0.51004
csdA YE0440 cold-shock dead-box protein Achromosome CDS511217 1974 + 0.515198
cysS YE3048 cysteinyl-tRNA synthetasechromosome CDS3313398 1386 - 0.48557
dbpA YE1785 ATP-dependent RNA helicasechromosome CDS1979790 1383 + 0.517715
ddhA YE3087 glucose-1-phosphate cytidylyltransferasechromosome CDS3357057 786 - 0.380407
def YE3889 polypeptide deformylasechromosome CDS4249692 513 + 0.448343
drpA YE3258 prolyl-tRNA synthetasechromosome CDS3557513 1719 + 0.487493
eryA YE3922 50S ribosomal protein L4chromosome CDS4268108 606 - 0.493399
eryB YE3918 50S ribosomal protein L22chromosome CDS4266328 333 - 0.504505
far YE3928 elongation factor Gchromosome CDS4272224 2115 - 0.48747
fmt YE3890 methionyl-tRNA formyltransferasechromosome CDS4250229 948 + 0.490506
ftsJ YE0427 ribosomal RNA large subunit methyltransferase Jchromosome CDS495142 630 + 0.466667
fusA YE0808 elongation factor Gchromosome CDS932613 2109 - 0.519678
glnS YE2977 glutaminyl-tRNA synthetasechromosome CDS3242234 1668 - 0.491007
gltX YE1215 glutamyl-tRNA synthetasechromosome CDS1354417 1416 - 0.499294
glyQ YE4151 glycyl-tRNA synthetase alpha subunitchromosome CDS4545615 915 - 0.518033
glyS YE4150 glycyl-tRNA synthetase beta subunitchromosome CDS4543536 2070 - 0.509662
gpL YE1674 phage head completion/stabilization proteinchromosome CDS1869993 483 - 0.587992
gsh-II YE3427 glutathione synthetasechromosome CDS3741574 954 + 0.504193
hisS YE1074 histidyl-tRNA synthetasechromosome CDS1202445 1275 + 0.494902
hslR YE3984 heat shock protein 15chromosome CDS4331265 408 + 0.514706
infA YE1519 translation initiation factor IF-1chromosome CDS1698097 219 - 0.493151
infB YE0434 translation initiation factor IF2-2chromosome CDS503106 2679 + 0.493841
infC YE1913 translation initiation factorchromosome CDS2094117 552 + 0.469203
leuS YE2996 leucyl-tRNA synthetasechromosome CDS3266354 2583 + 0.507549
ligT YE0727 putative 2'-5' RNA ligasechromosome CDS841669 558 - 0.532258
map YE3582 methionine aminopeptidasechromosome CDS3897825 786 + 0.494911
metG YE2785 methionyl-tRNA synthetasechromosome CDS3023451 2028 + 0.478797
miaB YE2985 putative tRNA-thiotransferasechromosome CDS3255184 1425 + 0.481403
mmrA YE0166 putative DEAD-box helicasechromosome CDS198907 1077 - 0.480966
mntA YE3230 probable aldose-ketose isomerasechromosome CDS3524356 1041 + 0.539865
neaA YE3914 30S ribosomal protein S17chromosome CDS4264744 255 - 0.447059
nusE YE3924 30S ribosomal protein S10chromosome CDS4269386 312 - 0.532051
p15B YE0435 ribosome-binding factor Achromosome CDS505851 411 + 0.454988
p35 YE0436 tRNA pseudouridine synthase Bchromosome CDS506261 990 + 0.50404
pcnB YE0723 poly(A) polymerasechromosome CDS837590 1323 - 0.50189
pduV YE2746 hypothetical proteinchromosome CDS2979989 435 + 0.512644
pdzA YE1915 50S ribosomal protein L20chromosome CDS2095000 357 + 0.481793
pheS YE1916 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2095821 984 + 0.481707
pheT YE1917 phenylalanyl-tRNA synthetase beta chainchromosome CDS2096819 2388 + 0.490369
prfA YE2431 peptide chain release factor 1chromosome CDS2621474 1083 - 0.511542
prfB YE3376 peptide chain release factor 2chromosome CDS3687703 1098 - 0.474499
prmA YE3815 ribosomal protein L11 methyltransferasechromosome CDS4162315 882 + 0.530612
pth YE2437 peptidyl-tRNA hydrolasechromosome CDS2627765 594 + 0.484848
queA YE3172 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS3442296 1089 - 0.492195
ramA YE3899 30S ribosomal protein S4chromosome CDS4257483 621 - 0.483092
rbaB YE1007 ATP-dependent RNA helicasechromosome CDS1126359 1326 - 0.502262
relC YE0281 50S ribosomal protein L11chromosome CDS327165 429 + 0.477855
rhlE YE2889 putative ATP-dependent RNA helicasechromosome CDS3140549 1356 - 0.527286
rimA YE4175 50S ribosomal protein L34chromosome CDS4574898 141 + 0.51773
rimJ YE2412 ribosomal-protein-alanine acetyltransferasechromosome CDS2605773 585 - 0.476923
rimM YE0844 16S rRNA processing proteinchromosome CDS971489 549 + 0.466302
rluA YE0635 ribosomal large subunit pseudouridine synthase Achromosome CDS729292 591 - 0.517766
rluA YE2636 putative ribosomal large subunit pseudouridine synthasechromosome CDS2854263 699 + 0.536481
rluC YE1628 ribosomal large subunit pseudouridine synthase Cchromosome CDS1835029 960 + 0.473958
rluD YE0891 ribosomal large subunit pseudouridine synthase Dchromosome CDS1014257 978 + 0.493865
rnd YE2374 ribonuclease Dchromosome CDS2560426 1122 - 0.483066
rnpA YE4176 ribonuclease P proteinchromosome CDS4575057 360 + 0.522222
rph YE0058 ribonuclease PHchromosome CDS69277 717 + 0.516039
rplA YE0282 50S ribosomal protein L1chromosome CDS327597 705 + 0.482269
rplB YE3920 50S ribosomal protein l2chromosome CDS4266968 825 - 0.517576
rplC YE3923 50S ribosomal protein L3chromosome CDS4268724 630 - 0.501587
rplE YE3911 50S ribosomal protein L5chromosome CDS4263328 540 - 0.490741
rplF YE3908 50S ribosomal protein L6chromosome CDS4262035 534 - 0.501873
rplI YE0395 50S ribosomal protein L9chromosome CDS461424 453 + 0.507726
rplJ YE0283 50S ribosomal protein L10chromosome CDS328676 504 + 0.5
rplL YE0284 50S ribosomal protein L7/L12chromosome CDS329248 369 + 0.466125
rplM YE3741 50S ribosomal protein L13chromosome CDS4087074 429 - 0.484848
rplN YE3913 50S ribosomal protein L14chromosome CDS4264207 372 - 0.505376
rplO YE3904 50S ribosomal protein L15chromosome CDS4260534 435 - 0.514943
rplP YE3916 50S ribosomal protein L16chromosome CDS4265189 411 - 0.513382
rplQ YE3897 50S ribosomal protein L17chromosome CDS4256035 390 - 0.54359
rplR YE3907 50S ribosomal protein L18chromosome CDS4261672 354 - 0.519774
rplS YE0846 50S ribosomal protein L19chromosome CDS972897 363 + 0.476584
rplU YE0418 50S ribosomal protein L21chromosome CDS487721 312 + 0.467949
rplW YE3921 50S ribosomal protein L23chromosome CDS4267809 303 - 0.488449
rplX YE3912 50S ribosomal protein L24chromosome CDS4263882 315 - 0.434921
rplY YE1422 50S ribosomal protein L25chromosome CDS1595406 288 - 0.447917
rpmA YE0419 50S ribosomal protein L27chromosome CDS488052 258 + 0.476744
rpmB YE0064 50S ribosomal protein L28chromosome CDS74374 237 + 0.523207
rpmC YE3915 50S ribosomal protein L29chromosome CDS4264998 192 - 0.494792
rpmD YE3905 50S ribosomal protein L30chromosome CDS4260972 180 - 0.433333
rpmE YE0109 50S ribosomal protein L31chromosome CDS120213 219 + 0.502283
rpmF YE1631 50S ribosomal protein L32chromosome CDS1837298 168 + 0.565476
rpmG YE0065 50S ribosomal protein L33chromosome CDS74622 168 + 0.404762
rpmI YE1914 50S ribosomal protein L35chromosome CDS2094765 198 + 0.449495
rpmJ YE3902 50S ribosomal protein L36chromosome CDS4259044 117 - 0.444444
rpsA YE1540 30S ribosomal protein S1chromosome CDS1728508 1674 + 0.482676
rpsB YE3284 30S ribosomal protein S2chromosome CDS3585988 726 - 0.483471
rpsC YE3917 30S ribosomal protein S3chromosome CDS4265612 699 - 0.493562
rpsE YE3906 30S ribosomal protein S5chromosome CDS4261154 504 - 0.484127
rpsF YE0392 30S ribosomal protein S6chromosome CDS460435 393 + 0.508906
rpsG YE3929 30S ribosomal protein S7chromosome CDS4274432 471 - 0.481953
rpsH YE3909 30S ribosomal protein S8chromosome CDS4262583 393 - 0.473282
rpsI YE3740 30S ribosomal protein S9chromosome CDS4086667 393 - 0.493639
rpsK YE3900 30S ribosomal protein S11chromosome CDS4258134 390 - 0.505128
rpsM YE3901 30S ribosomal protein S13chromosome CDS4258540 357 - 0.504202
rpsN YE3910 30S ribosomal protein S14chromosome CDS4263009 306 - 0.509804
rpsO YE0437 30S ribosomal protein S15chromosome CDS507372 270 + 0.485185
rpsP YE0843 30S ribosomal protein S16chromosome CDS971219 249 + 0.502008
rpsR YE0394 30S ribosomal protein S18chromosome CDS461157 228 + 0.47807
rpsS YE3919 30S ribosomal protein S19chromosome CDS4266675 279 - 0.505376
rpsU YE3682 30S ribosomal protein S21chromosome CDS4016940 216 + 0.467593
rpsl YE3930 30S ribosomal protein S12chromosome CDS4274999 375 - 0.514667
rsuA YE1424 ribosomal small subunit pseudouridine synthase Achromosome CDS1597953 708 + 0.509887
rumA YE0743 23s rRNA (uracil-5-)-methyltransferasechromosome CDS866251 1332 + 0.509009
selB YE4130 selenocysteinyl-tRNA-specific translation factorchromosome CDS4520019 1893 - 0.526149
serS YE1528 seryl-tRNA synthetasechromosome CDS1711824 1293 + 0.485692
spoU YE0044 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS54922 693 - 0.474747
tgt YE3166 queuine tRNA-ribosyltransferasechromosome CDS3438743 1137 - 0.475814
thrS YE1912 threonyl-tRNA synthetasechromosome CDS2092185 1929 + 0.481078
trmA YE0138 tRNA (uracil-5)-methyltransferasechromosome CDS155840 1104 - 0.491848
trmD YE0845 tRNA (guanine-N1)-methyltransferasechromosome CDS972076 741 + 0.527665
truA YE1309 tRNA pseudouridine synthase Achromosome CDS1455855 843 + 0.519573
tsf YE3283 elongation factor Tschromosome CDS3585002 858 - 0.480186
tufA YE3927 elongation factor Tuchromosome CDS4270968 1185 - 0.486076
tufA YE0278 elongation factor TUchromosome CDS324617 1185 + 0.480169
tyrS YE2139 tyrosyl-tRNA synthetasechromosome CDS2339601 1275 - 0.488627
valS YE0498 valyl-tRNA synthetasechromosome CDS571621 2898 - 0.516218
yadB YE0724 putative glutamyl-tRNA synthetasechromosome CDS839209 861 - 0.520325
yfiA YE0889 putative sigma 54 modulation proteinchromosome CDS1012660 363 - 0.440771
yhbH YE3760 probable sigma (54) modulation proteinchromosome CDS4103772 288 + 0.392361
ykgM YE3107 putative ribosomal proteinchromosome CDS3382624 261 + 0.482759
ymfC YE1724 putative pseudouridine synthasechromosome CDS1923129 627 - 0.46571
 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_2267 spermidine acetyltransferasechromosome CDS2538478 546 + 0.39011
NA YPA_3145 30S ribosomal protein S21chromosome CDS3490133 216 + 0.462963
NA YPA_3012 glycyl-tRNA synthetase beta subunitchromosome CDS3352140 2070 + 0.523188
NA YPA_3505 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS3908862 693 + 0.496392
NA YPA_3491 50S ribosomal protein L33chromosome CDS3896066 168 - 0.392857
NA YPA_2840 alanyl-tRNA synthetasechromosome CDS3165602 2217 + 0.501128
NA YPA_3312 tryptophanyl-tRNA synthetasechromosome CDS3654180 1041 - 0.48415
NA YPA_2851 tRNA (guanine-N1)-methyltransferasechromosome CDS3177150 741 + 0.523617
NA YPA_2990 cold-shock dead-box protein Achromosome CDS3327739 1995 - 0.535338
NA YPA_0330 glutathione synthetasechromosome CDS389987 960 - 0.490625
NA YPA_3248 50S ribosomal protein L6chromosome CDS3596861 534 - 0.513109
NA YPA_1930 50S ribosomal protein L32chromosome CDS2164130 168 - 0.553571
NA YPA_2895 putative 2'-5' RNA ligasechromosome CDS3226034 576 + 0.565972
NA YPA_1000 putative elongation factor Pchromosome CDS1147207 573 - 0.460733
NA YPA_1279 hypothetical proteinchromosome CDS1421024 582 - 0.489691
NA YPA_0054 hypothetical proteinchromosome CDS70870 294 + 0.438776
NA YPA_3668 ribosomal protein L11 methyltransferasechromosome CDS4110077 915 - 0.53224
NA YPA_2944 valyl-tRNA synthetasechromosome CDS3280687 2898 + 0.519669
NA YPA_3231 polypeptide deformylasechromosome CDS3584744 513 + 0.452242
NA YPA_2686 queuine tRNA-ribosyltransferasechromosome CDS2985004 1125 - 0.490667
NA YPA_1776 50S ribosomal protein L35chromosome CDS1993738 198 - 0.459596
NA YPA_3988 hypothetical proteinchromosome CDS4497485 1062 + 0.490584
NA YPA_2687 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS2986221 1086 - 0.512891
NA YPA_1934 ribosomal large subunit pseudouridine synthase Cchromosome CDS2166405 963 - 0.503634
NA YPA_3270 elongation factor Gchromosome CDS3609769 2109 - 0.480797
NA YPA_1423 ribosomal-protein-alanine acetyltransferasechromosome CDS1596245 585 + 0.483761
NA YPA_0111 tRNA (uracil-5)-methyltransferasechromosome CDS131501 1104 - 0.477355
NA YPA_2770 putative sigma 54 modulation proteinchromosome CDS3091781 363 + 0.446281
NA YPA_1402 putative protoporphyrinogen oxidasechromosome CDS1575315 831 + 0.535499
NA YPA_1338 putative acetyltransferasechromosome CDS1505253 711 + 0.447257
NA YPA_3854 peptide chain release factor 3chromosome CDS4340629 1590 - 0.497484
NA YPA_3667 hypothetical proteinchromosome CDS4108523 966 - 0.518634
NA YPA_3922 putative lysyl-tRNA synthetasechromosome CDS4419863 978 - 0.492843
NA YPA_2442 ATP-dependent RNA helicasechromosome CDS2723985 1326 - 0.505279
NA YPA_3254 30S ribosomal protein S17chromosome CDS3599585 255 - 0.466667
NA YPA_1148 ATP-dependent RNA helicasechromosome CDS1301713 1383 + 0.501085
NA YPA_3492 50S ribosomal protein L28chromosome CDS3896245 237 - 0.506329
NA YPA_3256 50S ribosomal protein L16chromosome CDS3600030 411 - 0.508516
NA YPA_4091 ribosomal large subunit pseudouridine synthase Achromosome CDS4608022 621 - 0.489533
NA YPA_2878 hypothetical proteinchromosome CDS3203409 126 - 0.507937
NA YPA_2629 putative ribosomal proteinchromosome CDS2927168 261 + 0.467433
NA YPA_3621 50S ribosomal protein L10chromosome CDS4063511 498 - 0.493976
NA YPA_3472 putative methyltransferasechromosome CDS3878226 489 + 0.490798
NA YPA_3620 50S ribosomal protein L7/L12chromosome CDS4063076 369 - 0.468835
NA YPA_3262 50S ribosomal protein L4chromosome CDS3602949 606 - 0.50165
NA YPA_1157 DNA polymerase III, theta subunitchromosome CDS1310428 231 - 0.441558
NA YPA_3272 30S ribosomal protein S12chromosome CDS3612538 375 - 0.506667
NA YPA_1852 YjgF-family lipoproteinchromosome CDS2081916 378 + 0.417989
NA YPA_3857 ribosomal RNA small subunit methyltransferase Cchromosome CDS4343335 1044 + 0.521073
NA YPA_3259 30S ribosomal protein S19chromosome CDS3601516 279 - 0.505376
NA YPA_1777 translation initiation factor IF-3chromosome CDS1994032 351 - 0.475783
NA YPA_3740 50S ribosomal protein L13chromosome CDS4192088 429 + 0.496504
NA YPA_3240 30S ribosomal protein S4chromosome CDS3592310 621 - 0.478261
NA YPA_3247 50S ribosomal protein L18chromosome CDS3596498 354 - 0.516949
NA YPA_3928 elongation factor Pchromosome CDS4425356 567 - 0.485009
NA YPA_3232 methionyl-tRNA formyltransferasechromosome CDS3585281 948 + 0.470464
NA YPA_1428 arginyl-tRNA synthetasechromosome CDS1607398 1731 - 0.499133
NA YPA_3227 hypothetical proteinchromosome CDS3581889 573 - 0.467714
NA YPA_2760 putative tRNA/rRNA methyltransferasechromosome CDS3072650 1167 - 0.533847
NA YPA_0388 hypothetical proteinchromosome CDS451581 261 + 0.394636
NA YPA_0669 seryl-tRNA synthetasechromosome CDS762503 1293 + 0.491106
NA YPA_2899 putative glutamyl-tRNA synthetasechromosome CDS3228175 1155 + 0.500433
NA YPA_1394 peptidyl-tRNA hydrolasechromosome CDS1568394 621 - 0.47182
NA YPA_3245 50S ribosomal protein L30chromosome CDS3595798 180 - 0.433333
NA YPA_3263 50S ribosomal protein L3chromosome CDS3603571 630 - 0.488889
NA YPA_2477 putative tRNA-thiotransferasechromosome CDS2764712 1440 + 0.48125
NA YPA_0882 helicasechromosome CDS1020805 1005 + 0.514428
NA YPA_3885 hypothetical proteinchromosome CDS4373722 537 - 0.409683
NA YPA_2362 putative zinc-binding proteinchromosome CDS2651947 564 - 0.537234
NA YPA_2752 amidasechromosome CDS3064154 1398 + 0.550072
NA YPA_3622 50S ribosomal protein L1chromosome CDS4064373 705 - 0.47234
NA YPA_1773 phenylalanyl-tRNA synthetase alpha chainchromosome CDS1991862 984 - 0.474593
NA YPA_3271 30S ribosomal protein S7chromosome CDS3611971 471 - 0.47983
NA YPA_3626 elongation factor Tuchromosome CDS4066881 1185 - 0.479325
NA YPA_4144 50S ribosomal protein L34chromosome CDS4669001 141 + 0.510638
NA YPA_4066 30S ribosomal protein S20chromosome CDS4581324 264 - 0.465909
NA YPA_2850 16S rRNA processing proteinchromosome CDS3176563 549 + 0.468124
NA YPA_3032 Translation elongation factor, selenocysteine-specificchromosome CDS3375692 1953 + 0.55658
NA YPA_3623 50S ribosomal protein L11chromosome CDS4065081 429 - 0.487179
NA YPA_2849 30S ribosomal protein S16chromosome CDS3176293 249 + 0.502008
NA YPA_0273 putative siderophore biosynthesis protein IucBchromosome CDS317903 951 - 0.554154
NA YPA_3513 hypothetical proteinchromosome CDS3919899 438 - 0.488584
NA YPA_0982 50S ribosomal protein L25chromosome CDS1125464 285 - 0.463158
NA YPA_3713 hypothetical proteinchromosome CDS4170057 387 - 0.483204
NA YPA_3251 50S ribosomal protein L5chromosome CDS3598154 540 - 0.488889
NA YPA_0660 translation initiation factor IF-1chromosome CDS748597 219 - 0.497717
NA YPA_1588 translation initiation factor SUI1 family proteinchromosome CDS1776495 327 + 0.477064
NA YPA_3255 50S ribosomal protein L29chromosome CDS3599839 192 - 0.5
NA YPA_1518 L-asparaginase Ichromosome CDS1702006 1017 - 0.476893
NA YPA_0626 putative RNA methyltransferasechromosome CDS713005 1131 + 0.521662
NA YPA_4145 ribonuclease P proteinchromosome CDS4669160 360 + 0.508333
NA YPA_1886 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS2119537 1116 + 0.499104
NA YPA_0677 putative L-asparaginase II precursorchromosome CDS773657 1038 + 0.467245
NA YPA_3261 50S ribosomal protein L23chromosome CDS3602650 303 - 0.485149
NA YPA_0061 50S ribosomal protein L27chromosome CDS77547 258 - 0.488372
NA YPA_2093 hypothetical proteinchromosome CDS2347613 933 - 0.488746
NA YPA_0380 peptide chain release factor 2chromosome CDS444649 933 + 0.46731
NA YPA_3233 hypothetical proteinchromosome CDS3586322 1290 + 0.460465
NA YPA_2768 ribosomal large subunit pseudouridine synthase Dchromosome CDS3089582 978 - 0.482618
NA YPA_1884 putative pseudouridine synthasechromosome CDS2118378 534 + 0.490637
NA YPA_3260 50S ribosomal protein l2chromosome CDS3601809 825 - 0.515152
NA YPA_1935 ribonuclease Echromosome CDS2167942 3666 + 0.510638
NA YPA_4086 dimethyladenosine transferasechromosome CDS4601202 819 - 0.47619
NA YPA_2630 putative ribosomal protein L36chromosome CDS2927444 144 + 0.479167
NA YPA_3252 50S ribosomal protein L24chromosome CDS3598708 315 - 0.460317
NA YPA_3249 30S ribosomal protein S8chromosome CDS3597409 393 - 0.475827
NA YPA_1571 putative RNA pseudouridylate synthase-family proteinchromosome CDS1758444 1035 + 0.510145
NA YPA_2467 glutaminyl-tRNA synthetasechromosome CDS2750772 1668 - 0.495803
NA YPA_1435 aspartyl-tRNA synthetasechromosome CDS1615933 1797 + 0.510295
NA YPA_3968 hypothetical proteinchromosome CDS4469398 1038 - 0.519268
NA YPA_0885 hypothetical proteinchromosome CDS1024116 945 + 0.486772
NA YPA_3244 50S ribosomal protein L15chromosome CDS3595360 435 - 0.510345
NA YPA_3250 30S ribosomal protein S14chromosome CDS3597835 306 - 0.513072
NA YPA_2900 poly(A) polymerasechromosome CDS3229418 1476 + 0.523713
NA YPA_0518 30S ribosomal protein S2chromosome CDS601405 726 + 0.477961
NA YPA_1715 tyrosyl-tRNA synthetasechromosome CDS1922988 1275 - 0.488627
NA YPA_0087 30S ribosomal protein S18chromosome CDS104315 228 - 0.473684
NA YPA_2318 histidyl-tRNA synthetasechromosome CDS2596989 1275 - 0.507451
NA YPA_2568 cysteinyl-tRNA synthetasechromosome CDS2860284 1386 - 0.497835
NA YPA_3162 putative translational inhibitor proteinchromosome CDS3504294 405 - 0.511111
NA YPA_0045 ribosome-binding factor Achromosome CDS59594 411 - 0.445255
NA YPA_4060 hypothetical proteinchromosome CDS4571855 2448 - 0.35335
NA YPA_3682 ribonuclease Gchromosome CDS4125671 1470 + 0.476871
NA YPA_1379 hypothetical proteinchromosome CDS1554861 1074 - 0.485102
NA YPA_1453 hypothetical proteinchromosome CDS1634982 345 - 0.486957
NA YPA_3991 hypothetical proteinchromosome CDS4500492 1080 + 0.525
NA YPA_3720 putative sigma N modulation factorchromosome CDS4174539 108 - 0.361111
NA YPA_1378 hypothetical proteinchromosome CDS1553165 906 - 0.40287
NA YPA_3264 30S ribosomal protein S10chromosome CDS3604233 312 - 0.525641
NA YPA_0825 putative siderophore biosynthetic enzymechromosome CDS954100 579 + 0.483592
NA YPA_3498 ribonuclease PHchromosome CDS3900926 717 - 0.51325
NA YPA_0086 50S ribosomal protein L9chromosome CDS103823 453 - 0.494481
NA YPA_2992 polyribonucleotide nucleotidyltransferasechromosome CDS3330929 2196 - 0.498634
NA YPA_MT0023 hypothetical proteinpMT CDS24095 834 - 0.556355
NA YPA_2852 50S ribosomal protein L19chromosome CDS3177971 348 + 0.477012
NA YPA_3257 30S ribosomal protein S3chromosome CDS3600453 699 - 0.492132
NA YPA_3140 tRNA nucleotidyltransferasechromosome CDS3484785 1239 + 0.533495
NA YPA_1393 hypothetical proteinchromosome CDS1567139 1092 - 0.495421
NA YPA_0260 50S ribosomal protein L31chromosome CDS302141 216 + 0.490741
NA YPA_3152 hypothetical proteinchromosome CDS3495851 471 - 0.422505
NA YPA_0046 translation initiation factor IF2-2chromosome CDS60070 2655 - 0.496045
NA YPA_3269 elongation factor Tuchromosome CDS3608512 1185 - 0.481857
NA YPA_3719 hypothetical proteinchromosome CDS4174359 174 - 0.385057
NA YPA_0043 30S ribosomal protein S15chromosome CDS58229 270 - 0.485185
NA YPA_0523 ribosome recycling factorchromosome CDS604895 558 + 0.47491
NA YPA_2608 glucose-1-phosphate cytidylyltransferasechromosome CDS2903245 786 - 0.437659
NA YPA_2173 glutamyl-tRNA synthetasechromosome CDS2438668 1416 + 0.492232
NA YPA_0044 tRNA pseudouridine synthase Bchromosome CDS58620 975 - 0.494359
NA YPA_0089 30S ribosomal protein S6chromosome CDS104873 393 - 0.508906
NA YPA_4068 isoleucyl-tRNA synthetasechromosome CDS4582972 2817 + 0.500887
NA YPA_3242 30S ribosomal protein S13chromosome CDS3593367 357 - 0.504202
NA YPA_3822 periplasmic pectate lyase precursorchromosome CDS4301172 1719 - 0.4968
NA YPA_1401 peptide chain release factor 1chromosome CDS1574233 1083 + 0.514312
NA YPA_2807 methionine aminopeptidasechromosome CDS3127720 786 - 0.510178
NA YPA_0520 elongation factor Tschromosome CDS602258 858 + 0.480186
NA YPA_3253 50S ribosomal protein L14chromosome CDS3599033 372 - 0.502688
NA YPA_1778 threonyl-tRNA synthetasechromosome CDS1994587 1929 - 0.473302
NA YPA_3246 30S ribosomal protein S5chromosome CDS3595980 504 - 0.484127
NA YPA_0543 hypothetical proteinchromosome CDS626070 441 + 0.489796
NA YPA_0545 prolyl-tRNA synthetasechromosome CDS627412 1719 - 0.499127
NA YPA_2078 tRNA pseudouridine synthase Achromosome CDS2330940 882 - 0.50907
NA YPA_0512 hypothetical proteinchromosome CDS594586 774 + 0.48708
NA YPA_1095 DEAD/DEAH box helicasechromosome CDS1249237 1356 + 0.517699
NA YPA_0149 putative DEAD-box helicasechromosome CDS180214 1287 - 0.486402
NA YPA_3912 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4404237 942 - 0.511677
NA YPA_1570 hypothetical proteinchromosome CDS1757494 621 + 0.460548
NA YPA_0517 methionine aminopeptidasechromosome CDS600179 792 - 0.488636
NA YPA_0053 ribosomal RNA large subunit methyltransferase Jchromosome CDS70094 630 - 0.455556
NA YPA_0062 50S ribosomal protein L21chromosome CDS77824 312 - 0.455128
NA YPA_1764 formyl transferasechromosome CDS1981253 2004 - 0.457585
NA YPA_3238 50S ribosomal protein L17chromosome CDS3590865 390 - 0.54359
NA YPA_0381 lysyl-tRNA synthetasechromosome CDS445591 1518 + 0.479578
NA YPA_3163 putative translational inhibitor proteinchromosome CDS3504983 381 - 0.354331
NA YPA_3200 putative methyltransferasechromosome CDS3556236 1188 - 0.495791
NA YPA_1458 ribonuclease Dchromosome CDS1641325 1161 + 0.477175
NA YPA_1775 50S ribosomal protein L20chromosome CDS1993344 357 - 0.498599
NA YPA_3258 50S ribosomal protein L22chromosome CDS3601169 333 - 0.501502
NA YPA_0582 hypothetical proteinchromosome CDS664240 342 - 0.459064
NA YPA_2487 leucyl-tRNA synthetasechromosome CDS2775444 2583 + 0.510647
NA YPA_0707 asparaginyl-tRNA synthetasechromosome CDS812343 1401 - 0.498929
NA YPA_0984 ribosomal small subunit pseudouridine synthase Achromosome CDS1128181 708 + 0.519774
NA YPA_3903 putative methylasechromosome CDS4393725 741 - 0.538462
NA YPA_3011 glycyl-tRNA synthetase alpha subunitchromosome CDS3351216 915 + 0.527869
NA YPA_3241 30S ribosomal protein S11chromosome CDS3592961 390 - 0.502564
NA YPA_3329 heat shock protein 15chromosome CDS3672013 408 + 0.522059
NA YPA_0683 30S ribosomal protein S1chromosome CDS782005 1674 + 0.479092
NA YPA_2339 putative SpoU-family rRNA methylasechromosome CDS2624467 774 - 0.502584
NA YPA_3741 30S ribosomal protein S9chromosome CDS4192531 393 + 0.493639
 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO2750 hypothetical proteinchromosome CDS3082727 933 + 0.488746
NA YPO0293 hypothetical proteinchromosome CDS294300 1062 - 0.490584
NA YPO0627 putative translational inhibitor proteinchromosome CDS688077 381 + 0.354331
NA YPO0240 hypothetical proteinchromosome CDS238588 1290 - 0.460465
NA YPO1284 elongation factor Pchromosome CDS1442544 573 - 0.460733
NA YPMT1.22c hypothetical proteinpMT1 CDS24093 834 - 0.556355
NA YPO1066 hypothetical proteinchromosome CDS1209358 417 + 0.494005
NA YPO3693 hypothetical proteinchromosome CDS4127240 639 + 0.41784
NA YPO2923 putative zinc-binding proteinchromosome CDS3269085 480 - 0.554167
NA YPO0316 hypothetical proteinchromosome CDS323066 1038 + 0.519268
NA YPO0381 putative methylasechromosome CDS397600 741 + 0.538462
NA YPO0029 D-tyrosyl-tRNA deacylasechromosome CDS38825 438 + 0.488584
NA YPO1996 hypothetical proteinchromosome CDS2268167 906 - 0.40287
NA YPO3590 hypothetical proteinchromosome CDS3998123 387 + 0.483204
NA YPO3655 hypothetical proteinchromosome CDS4073470 966 - 0.518634
NA YPO2212 hypothetical proteinchromosome CDS2485525 621 + 0.460548
NA YPO0628 putative translational inhibitor proteinchromosome CDS688742 405 + 0.511111
NA YPO1591 ribosomal large subunit pseudouridine synthase Cchromosome CDS1816989 963 + 0.503634
NA YPO0884 hypothetical proteinchromosome CDS968972 261 - 0.394636
NA YPO1104 hypothetical proteinchromosome CDS1247504 351 - 0.45584
NA YPO1595 50S ribosomal protein L32chromosome CDS1820059 168 + 0.553571
NA YPO2898 putative SpoU-family rRNA methylasechromosome CDS3240880 774 - 0.502584
NA YPO2213 putative RNA pseudouridylate synthase-family proteinchromosome CDS2486570 957 + 0.513062
NA YPO3134 50S ribosomal protein L31chromosome CDS3495495 261 + 0.467433
NA YPO1175 hypothetical proteinchromosome CDS1323368 945 + 0.486772
NA YPO1038 hypothetical proteinchromosome CDS1178545 774 + 0.48708
NA YPO3504 hypothetical proteinchromosome CDS3914946 294 + 0.438776
NA YPO1640 putative pseudouridine synthasechromosome CDS1865466 627 - 0.492823
NA YPO0362 lysyl-tRNA synthetasechromosome CDS371392 978 + 0.492843
NA YPO0290 hypothetical proteinchromosome CDS291275 1080 - 0.525
NA YPO3135 50S ribosomal protein L36chromosome CDS3495771 144 + 0.479167
NA YPO0071 putative methyltransferasechromosome CDS80447 489 - 0.490798
NA YPO3261 amidasechromosome CDS3632668 1398 + 0.550072
NA YPO1955 putative acetyltransferasechromosome CDS2220029 900 + 0.438889
NA YPO1997 hypothetical proteinchromosome CDS2269863 1074 - 0.485102
NA YPO3398 glutamyl-tRNA synthetasechromosome CDS3795916 966 + 0.505176
NA YPO0245a hypothetical proteinchromosome CDS243738 573 + 0.467714
NA YPO1638 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1863725 1116 - 0.499104
NA YPO1669 YjgF-family lipoproteinchromosome CDS1900110 378 - 0.417989
NA YPO0400 hypothetical proteinchromosome CDS417807 537 + 0.409683
NA YPO2070 hypothetical proteinchromosome CDS2349958 345 - 0.486957
NA YPO3674 putative insecticidal toxinchromosome CDS4101516 3036 - 0.481225
NA YPO2010 hypothetical proteinchromosome CDS2282141 1092 - 0.495421
NA YPO3279 putative sigma 54 modulation proteinchromosome CDS3660327 363 + 0.446281
NA YPO1902 hypothetical proteinchromosome CDS2137945 582 - 0.489691
NA YPO0588 putative methyltransferasechromosome CDS636017 1188 + 0.495791
NA YPO1336 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1501209 1131 + 0.521662
NA YPO2420 hypothetical proteinchromosome CDS2719869 2004 - 0.457585
NA YPO0640 hypothetical proteinchromosome CDS697119 471 + 0.422505
NA YPO2018 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2290317 831 + 0.535499
NA YPO0466 hypothetical proteinchromosome CDS493618 2448 - 0.35335
NA YPO2228 hypothetical proteinchromosome CDS2504544 327 + 0.477064
alaS YPO3305 alanyl-tRNA synthetasechromosome CDS3683714 2628 - 0.5
alcB YPO1531 putative siderophore biosynthetic enzymechromosome CDS1742180 582 + 0.484536
ampM YPO1043 methionine aminopeptidasechromosome CDS1184138 792 - 0.488636
ansA YPO2161 cytoplasmic asparaginase Ichromosome CDS2430044 1017 - 0.476893
ansB YPO1386 putative L-asparaginase II precursorchromosome CDS1563862 1038 + 0.467245
argS YPO2046 arginyl-tRNA synthetasechromosome CDS2323093 1731 - 0.499133
asnS YPO1412 asparaginyl-tRNA synthetasechromosome CDS1600525 1401 - 0.498929
aspS YPO2053 aspartyl-tRNA synthetasechromosome CDS2331620 1797 + 0.510295
cafA YPO3669 ribonuclease Gchromosome CDS4090621 1470 + 0.476871
cca YPO0650 tRNA nucleotidyltransferasechromosome CDS707417 1239 - 0.533495
cysS YPO3073 cysteinyl-tRNA synthetasechromosome CDS3428619 1386 - 0.497835
dbpA YPO1776 ATP-dependent RNA helicasechromosome CDS2022577 1383 + 0.501085
ddhA YPO3115 glucose-1-phosphate cytidylyltransferasechromosome CDS3471573 786 - 0.437659
deaD YPO3488 cold-shock dead-box protein Achromosome CDS3895290 1995 - 0.535338
def YPO0242 peptide deformylasechromosome CDS240943 513 - 0.452242
efp YPO0354 elongation factor Pchromosome CDS365600 567 + 0.485009
fmt YPO0241 methionyl-tRNA formyltransferasechromosome CDS239971 948 - 0.470464
frr YPO1047 ribosome releasing factorchromosome CDS1188144 558 + 0.47491
ftsJ YPO3503 ribosomal RNA large subunit methyltransferase Jchromosome CDS3914170 630 - 0.455556
fusA YPO0202 elongation factor Gchromosome CDS216281 2109 + 0.480797
glnS YPO2630 glutaminyl-tRNA synthetasechromosome CDS2956358 1668 + 0.495803
gltX YPO2984 glutamyl-tRNA synthetasechromosome CDS3333476 1416 + 0.492232
glyQ YPO4072 glycyl-tRNA synthetase alpha subunitchromosome CDS4593300 915 - 0.527869
glyS YPO4071 glycyl-tRNA synthetase beta subunitchromosome CDS4591221 2070 - 0.523188
gshB YPO0935 glutathione synthetasechromosome CDS1027196 960 + 0.491667
hisS YPO2878 histidyl-tRNA synthetasechromosome CDS3213416 1275 - 0.507451
holE YPO1782 DNA polymerase III, theta subunitchromosome CDS2029331 231 - 0.441558
hslR YPO0140 heat shock protein 15chromosome CDS153758 408 - 0.522059
ileS YPO0475 isoleucyl-tRNA synthetasechromosome CDS504735 2817 + 0.500887
infA YPO1370 translation initiation factor IF-1chromosome CDS1538760 219 - 0.497717
infB YPO3496 translation initiation factor IF-2chromosome CDS3904146 2655 - 0.496045
infC YPO2432 translation initiation factor IF-3chromosome CDS2732648 552 - 0.474638
iucB YPO0991 putative siderophore biosynthesis protein IucBchromosome CDS1099293 951 + 0.554154
ksgA YPO0492 dimethyladenosine transferasechromosome CDS522965 819 - 0.47619
leuS YPO2610 leucyl-tRNA synthetasechromosome CDS2930913 2583 - 0.510647
ligT YPO3395 putative 2'-5' RNA ligasechromosome CDS3793586 576 + 0.565972
lysS YPO0888 lysyl-tRNA synthetasechromosome CDS971744 1518 - 0.479578
map YPO3337 methionine aminopeptidasechromosome CDS3723448 786 + 0.510178
miaA YPO0372 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS386887 942 + 0.511677
miaB YPO2620 putative tRNA-thiotransferasechromosome CDS2942788 1425 - 0.482105
pcnB YPO3399 poly(A) polymerasechromosome CDS3797123 1323 + 0.517007
pelY YPO3994 periplasmic pectate lyase precursorchromosome CDS4500698 1719 - 0.4968
pheS YPO2429 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2730478 984 - 0.47561
pnp YPO3490 polyribonucleotide nucleotidyltransferasechromosome CDS3898480 2118 - 0.500944
prfA YPO2017 peptide chain release factor 1chromosome CDS2289235 1083 + 0.514312
prfB YPO0889 peptide chain release factor 2chromosome CDS973271 1101 - 0.473206
prfC YPO0430 peptide chain release factor 3chromosome CDS449865 1590 + 0.497484
prmA YPO3656 ribosomal protein L11 methyltransferasechromosome CDS4075024 882 - 0.530612
proS YPO1068 prolyl-tRNA synthetasechromosome CDS1210676 1719 - 0.499127
pth YPO2011 peptidyl-tRNA hydrolasechromosome CDS2283396 591 - 0.477157
queA YPO3192 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS3553831 1071 - 0.513539
rbfA YPO3495 ribosome-binding factor Achromosome CDS3903670 411 - 0.445255
rhlB YPO3869 ATP-dependent RNA helicasechromosome CDS4343947 1287 + 0.486402
rimJ YPO2041 ribosomal-protein-alanine acetyltransferasechromosome CDS2311957 585 + 0.483761
rimM YPO3294 16S rRNA-processing proteinchromosome CDS3673178 549 - 0.468124
rluA YPO0497 ribosomal large subunit pseudouridine synthase Achromosome CDS529785 621 - 0.489533
rluD YPO3277 ribosomal large subunit pseudouridine synthase Dchromosome CDS3658128 978 - 0.482618
rmf YPO1423a putative ribosome modulation factorchromosome CDS1618498 168 + 0.511905
rnd YPO2075 ribonuclease Dchromosome CDS2356340 1122 + 0.481283
rne YPO1590 ribonuclease Echromosome CDS1812749 3666 - 0.510638
rnpA YPO4101 ribonuclease Pchromosome CDS4620598 360 + 0.508333
rph YPO0044 ribonuclease PHchromosome CDS57519 717 + 0.51325
rplA YPO3750 50S ribosomal protein L1chromosome CDS4207281 705 - 0.47234
rplB YPO0213 50S ribosomal protein L2chromosome CDS223566 825 + 0.515152
rplC YPO0210 50S ribosomal protein L3chromosome CDS221999 630 + 0.488889
rplD YPO0211 50S ribosomal protein L4chromosome CDS222645 606 + 0.50165
rplE YPO0222 50S ribosomal protein L5chromosome CDS227506 540 + 0.488889
rplF YPO0224 50S ribosomal protein L6chromosome CDS228805 534 + 0.513109
rplI YPO3536 50S ribosomal protein L9chromosome CDS3947900 453 - 0.494481
rplJ YPO3749 50S ribosomal protein L10chromosome CDS4206419 498 - 0.493976
rplK YPO3751 50S ribosomal protein L11chromosome CDS4207989 429 - 0.487179
rplL YPO3748 50S ribosomal protein L7/L12chromosome CDS4205984 369 - 0.468835
rplM YPO3563 50S ribosomal protein L13chromosome CDS3976050 429 - 0.496504
rplN YPO0220 50S ribosomal protein L14chromosome CDS226795 372 + 0.502688
rplO YPO0228 50S ribosomal protein L15chromosome CDS230405 435 + 0.510345
rplP YPO0217 50S ribosomal protein L16chromosome CDS225759 411 + 0.508516
rplQ YPO0235 50S ribosomal protein L17chromosome CDS234945 390 + 0.54359
rplR YPO0225 50S ribosomal protein L18chromosome CDS229348 354 + 0.516949
rplS YPO3292 50S ribosomal protein L19chromosome CDS3671971 348 - 0.477012
rplT YPO2430 50S ribosomal protein L20chromosome CDS2731960 357 - 0.498599
rplU YPO3512 50S ribosomal protein L21chromosome CDS3921900 312 - 0.455128
rplV YPO0215 50S ribosomal protein L22chromosome CDS224698 333 + 0.501502
rplW YPO0212 50S ribosomal protein L23chromosome CDS223247 303 + 0.485149
rplX YPO0221 50S ribosomal protein L24chromosome CDS227177 315 + 0.460317
rplY YPO1264 50S ribosomal protein L25chromosome CDS1420786 285 - 0.463158
rpmA YPO3511 50S ribosomal protein L27chromosome CDS3921623 258 - 0.488372
rpmB YPO0050 50S ribosomal protein L28chromosome CDS62680 237 + 0.506329
rpmC YPO0218 50S ribosomal protein L29chromosome CDS226169 192 + 0.5
rpmD YPO0227 50S ribosomal protein L30chromosome CDS230222 180 + 0.433333
rpmE YPO0111 50S ribosomal protein L31chromosome CDS119972 216 + 0.490741
rpmG YPO0051 50S ribosomal protein L33chromosome CDS62928 168 + 0.392857
rpmH YPO4100 50S ribosomal protein L34chromosome CDS4620439 141 + 0.510638
rpmI YPO2431 50S ribosomal protein L35chromosome CDS2732354 198 - 0.459596
rpmJ YPO0230 50S ribosomal protein L36chromosome CDS232212 117 + 0.444444
rpsA YPO1392 30S ribosomal protein S1chromosome CDS1572210 1674 + 0.479092
rpsB YPO1044 30S ribosomal protein S2chromosome CDS1185364 726 + 0.477961
rpsC YPO0216 30S ribosomal protein S3chromosome CDS225048 699 + 0.493562
rpsD YPO0233 30S ribosomal protein S4chromosome CDS233269 621 + 0.478261
rpsE YPO0226 30S ribosomal protein S5chromosome CDS229716 504 + 0.484127
rpsF YPO3539 30S ribosomal protein S6chromosome CDS3948950 393 - 0.508906
rpsG YPO0201 30S ribosomal protein S7chromosome CDS215717 471 + 0.47983
rpsH YPO0223 30S ribosomal protein S8chromosome CDS228398 393 + 0.475827
rpsI YPO3562 30S ribosomal protein S9chromosome CDS3975643 393 - 0.493639
rpsJ YPO0209 30S ribosomal protein S10chromosome CDS221655 312 + 0.525641
rpsK YPO0232 30S ribosomal protein S11chromosome CDS232849 390 + 0.502564
rpsM YPO0231 30S ribosomal protein S13chromosome CDS232476 357 + 0.504202
rpsN YPO0222a 30S ribosomal protein S14chromosome CDS228059 306 + 0.513072
rpsO YPO3493 30S ribosomal protein S15chromosome CDS3902305 270 - 0.485185
rpsP YPO3295 30S ribosomal protein S16chromosome CDS3673748 249 - 0.502008
rpsQ YPO0219 30S ribosomal protein S17chromosome CDS226360 255 + 0.466667
rpsR YPO3537 30S ribosomal protein S18chromosome CDS3948392 228 - 0.473684
rpsS YPO0214 30S ribosomal protein S19chromosome CDS224405 279 + 0.505376
rpsT YPO0472 30S ribosomal protein S20chromosome CDS503087 264 - 0.465909
rpsU YPO0645 30S ribosomal protein S21chromosome CDS703092 216 - 0.462963
rpsl YPO0200 30S ribosomal protein S12chromosome CDS215246 375 + 0.506667
rsmC YPO0427 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS447705 1044 - 0.521073
rsuA YPO1266 ribosomal small subunit pseudouridine synthase Achromosome CDS1423503 708 + 0.519774
serS YPO1379 seryl-tRNA synthetasechromosome CDS1552685 1293 + 0.491106
speG YPO2830 spermidine acetyltransferasechromosome CDS3156889 546 + 0.39011
srmB YPO2708 ATP-dependent RNA helicasechromosome CDS3034941 1326 - 0.505279
tgt YPO3191 queuine tRNA-ribosyltransferasechromosome CDS3552614 1125 - 0.490667
thrS YPO2433 threonyl-tRNA synthetasechromosome CDS2733203 1929 - 0.473302
trmA YPO3911 tRNA (uracil-5-)-methyltransferasechromosome CDS4393381 1104 + 0.477355
trmD YPO3293 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3672399 741 - 0.523617
trmH YPO0037 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS49607 693 - 0.496392
trpS YPO0157 tryptophanyl-tRNA synthetasechromosome CDS170958 1041 + 0.48415
truA YPO2766 tRNA pseudouridine synthase Achromosome CDS3100249 795 + 0.515723
truB YPO3494 tRNA pseudouridine synthase Bchromosome CDS3902696 975 - 0.494359
tsf YPO1045 elongation factor Tschromosome CDS1186217 858 + 0.480186
tuf YPO3754 elongation factor Tuchromosome CDS4209789 1185 - 0.479325
tuf YPO0203 elongation factor Tuchromosome CDS218462 1185 + 0.481857
tyrS YPO2369 tyrosyl-tRNA synthetasechromosome CDS2661823 1275 - 0.488627
valS YPO3443 valyl-tRNA synthetasechromosome CDS3848237 2898 + 0.519669
yfiF YPO3269 putative tRNA/rRNA methyltransferasechromosome CDS3641196 1167 - 0.533847
 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y3590 enzymechromosome CDS3983335 1191 - 0.496222
NA y2070 hypothetical proteinchromosome CDS2280805 327 + 0.477064
NA y3708 hypothetical proteinchromosome CDS4122538 2448 + 0.35335
NA y2355 hypothetical proteinchromosome CDS2595870 900 - 0.438889
NA y0928 amidasechromosome CDS1044498 1398 - 0.550072
NA Y1032 hypothetical proteinpMT-1 CDS23344 456 + 0.576754
NA y3015 regulator proteinchromosome CDS3323569 945 - 0.486772
NA y2240 hypothetical proteinchromosome CDS2469182 345 + 0.486957
NA y0213 dehydrogenasechromosome CDS228754 1068 + 0.5103
NA y0618 lysyl-tRNA synthetasechromosome CDS696809 999 + 0.491491
NA y3678 hypothetical proteinchromosome CDS4088198 621 + 0.489533
NA y0638 hypothetical proteinchromosome CDS722960 741 + 0.538462
NA y1068 glucose-1-phosphate cytidylyltransferasechromosome CDS1203414 786 + 0.437659
NA y0574 hypothetical proteinchromosome CDS649215 1038 + 0.519268
NA y1584 adenine-specific methylasechromosome CDS1751198 1002 + 0.48004
NA y4027 hypothetical proteinchromosome CDS4464830 585 + 0.466667
NA y3800 D-tyrosyl-tRNA deacylasechromosome CDS4219550 438 - 0.488584
NA y3920 hypothetical proteinchromosome CDS4376839 408 - 0.522059
NA y0910 yhbH sigma 54 modulatorchromosome CDS1017874 465 - 0.434409
NA y3782 hypothetical proteinchromosome CDS4202247 537 - 0.409683
NA y1332 ATP synthase beta subunitchromosome CDS1478572 774 + 0.502584
NA y0680 hypothetical proteinchromosome CDS763503 294 - 0.438776
NA y2845 23S rRNA (uracil-5-)-methyltransferasechromosome CDS3145392 1131 - 0.521662
NA y0071 hypothetical proteinchromosome CDS80349 585 + 0.488889
NA y1195 hypothetical proteinchromosome CDS1338920 1539 - 0.481481
NA y0895 16S rRNA-processing proteinchromosome CDS1004825 561 + 0.467023
NA y1801 hypothetical proteinchromosome CDS1980775 627 - 0.492823
NA y2313 hypothetical proteinchromosome CDS2547779 906 + 0.40287
NA y2298 GTP-binding proteinchromosome CDS2533619 1092 + 0.495421
NA y0155 sigma-54 modulation proteinchromosome CDS163684 108 + 0.361111
NA y0554 hypothetical proteinchromosome CDS621131 1062 - 0.490584
NA y2312 hypothetical proteinchromosome CDS2545915 1074 + 0.485102
NA y2053 hypothetical proteinchromosome CDS2261768 621 + 0.460548
NA y3111 hypothetical proteinchromosome CDS3425034 441 - 0.489796
NA y2054 hypothetical proteinchromosome CDS2262752 1035 + 0.510145
NA y1048 50S ribosomal protein L31chromosome CDS1181975 324 - 0.429012
NA y2901 elongation factor Pchromosome CDS3204538 642 + 0.457944
NA y0789 glutamyl-tRNA synthetasechromosome CDS881676 1155 - 0.500433
NA y2407 hypothetical proteinchromosome CDS2678272 582 + 0.489691
NA y0793 hypothetical proteinchromosome CDS884396 576 - 0.565972
NA y0551 hypothetical proteinchromosome CDS618106 1080 - 0.525
NA y0163 hypothetical proteinchromosome CDS167848 426 + 0.476526
NA y1830 hypothetical proteinchromosome CDS2015426 408 - 0.426471
NA y0810 hypothetical proteinchromosome CDS907473 126 + 0.507937
NA y3143 hypothetical proteinchromosome CDS3455475 774 - 0.48708
NA y1799 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1979034 1116 - 0.499104
NA y1750 hypothetical proteinchromosome CDS1934904 1026 + 0.501949
NA y3542 hypothetical proteinchromosome CDS3924909 513 - 0.419103
NA y3834 pectate lyasechromosome CDS4266709 1719 + 0.4968
NA y1307 deaminasechromosome CDS1449259 603 + 0.533997
NA y3550 hypothetical proteinchromosome CDS3931393 405 - 0.511111
NA y0156 sigma-54 modulation proteinchromosome CDS163798 174 + 0.385057
NA y1919 hypothetical proteinchromosome CDS2112386 2004 + 0.457585
NA y0170 hypothetical proteinchromosome CDS175412 645 - 0.415504
NA y0920 hypothetical proteinchromosome CDS1036186 1182 + 0.532995
NA y3551 hypothetical proteinchromosome CDS3932082 381 - 0.354331
alaS y0883 alanyl-tRNA synthetasechromosome CDS992238 2628 + 0.5
ansA y2161 cytoplasmic asparaginase Ichromosome CDS2389132 1017 + 0.476893
ansB y2787 periplasmic L-asparaginase IIchromosome CDS3082839 1038 - 0.467245
argS y2266 arginyl-tRNA synthetasechromosome CDS2494665 1731 + 0.499133
asnS y2758 asparaginyl-tRNA synthetasechromosome CDS3045805 1401 + 0.498929
aspS y2258 aspartyl-tRNA synthetasechromosome CDS2486068 1797 - 0.510295
cafA y0196 cytoplasmic filament proteinchromosome CDS211201 1470 - 0.476871
cca y3529 tRNA nucleotidyl transferasechromosome CDS3913843 1239 + 0.533495
cysS y1107 cysteinyl-tRNA synthetasechromosome CDS1245716 1431 + 0.494759
dbpA y2531 ATP-dependent RNA helicasechromosome CDS2792757 1383 - 0.501085
deaD y0696 inducible ATP-independent RNA helicasechromosome CDS781467 2010 + 0.535323
def y4023 peptide deformylasechromosome CDS4462047 513 - 0.452242
efp y0612 elongation factor Pchromosome CDS691748 567 + 0.485009
fmt y4022 methionyl-tRNA formyltransferasechromosome CDS4461075 948 - 0.470464
frr y3133 ribosome releasing factorchromosome CDS3446092 558 - 0.47491
ftsJ y0681 cell division proteinchromosome CDS763931 642 + 0.453271
fusA y3985 GTP-binding protein chain elongation factor EF-Gchromosome CDS4437385 2109 + 0.480797
glnS y1205 glutaminyl-tRNA synthetasechromosome CDS1352518 1797 + 0.491375
gltX y1498 glutamyl-tRNA synthetasechromosome CDS1659754 1416 - 0.492232
glyQ y4090 glycyl-tRNA synthetase alpha subunitchromosome CDS4540086 915 - 0.527869
glyS y4089 glycyl-tRNA synthetase beta subunitchromosome CDS4538007 2070 - 0.523188
gshB y3321 glutathione synthetasechromosome CDS3655274 960 + 0.491667
hemK y2289 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2525704 831 - 0.535499
hisS y1354 histidyl-tRNA synthetasechromosome CDS1505369 1275 + 0.508235
holE y2525 DNA polymerase III, theta subunitchromosome CDS2787116 270 + 0.444444
ileS y3700 isoleucyl-tRNA synthetasechromosome CDS4111052 2817 - 0.500887
infA y2807 translation initiation factor IF-1chromosome CDS3110712 219 + 0.497717
infB y0688 translation initiation factor IF-2chromosome CDS771942 2679 + 0.4972
infC y1904 protein chain initiation factor IF-3chromosome CDS2101260 351 + 0.475783
iucB y3382 acetyl CoA:N6-hydroxylsyine acetyl transferasechromosome CDS3727395 951 + 0.554154
ksgA y3683 dimethyladenosine transferasechromosome CDS4094820 819 + 0.47619
leuS y1184 leucyl-tRNA synthetasechromosome CDS1327045 2583 - 0.510647
lysS y3272 lysyl-tRNA synthetasechromosome CDS3601776 1518 - 0.479578
map y0852 methionine aminopeptidasechromosome CDS954351 786 - 0.510178
map y3138 methionine aminopeptidasechromosome CDS3449864 792 + 0.488636
miaA y0629 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS712247 942 + 0.511677
pcnB y0788 poly(A) polymerase Ichromosome CDS880112 1476 - 0.523713
pheS y1908 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2102797 984 + 0.47561
pnp y0694 polynucleotide phosphorylasechromosome CDS778073 2214 + 0.498645
prfA y2290 peptide chain release factor 1chromosome CDS2526534 1083 - 0.514312
prfB y3273 peptide chain release factor RF-2chromosome CDS3603303 933 - 0.46731
prfC y3749 peptide chain release factor 3chromosome CDS4169136 1590 - 0.497484
prmA y0212 ribosomal protein L11 methyltransferasechromosome CDS227347 921 + 0.53203
proS y3109 prolyl-tRNA synthetasechromosome CDS3422414 1719 + 0.499127
pth y2297 peptidyl-tRNA hydrolasechromosome CDS2532835 621 + 0.47182
queA y0990 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1120869 1071 + 0.513539
rbfA y0689 ribosome-binding factor Achromosome CDS774632 465 + 0.453763
rhlB y0359 ATP-dependent RNA helicasechromosome CDS400456 1287 - 0.486402
rimJ y2271 ribosomal-protein-alanine N-acetyltransferasechromosome CDS2506979 585 - 0.483761
rnd y2235 RNase Dchromosome CDS2462022 1161 - 0.477175
rne y1749 RNase Echromosome CDS1930742 3651 - 0.510819
rnpA y4115 ribonuclease Pchromosome CDS4567376 360 + 0.508333
rph y0097 ribonuclease PHchromosome CDS103145 717 - 0.51325
rplA y0481 50S ribosomal protein L1chromosome CDS537730 705 + 0.47234
rplB y3993 50S ribosomal protein L2chromosome CDS4444670 825 + 0.515152
rplC y3990 50S ribosomal protein L3chromosome CDS4443103 630 + 0.488889
rplD y3991 50S ribosomal protein L4chromosome CDS4443749 606 + 0.50165
rplE y4001 50S ribosomal protein L5chromosome CDS4448610 540 + 0.488889
rplF y4004 50S ribosomal protein L6chromosome CDS4449909 534 + 0.513109
rplI y0647 50S ribosomal protein L9chromosome CDS730390 453 + 0.494481
rplJ y0482 50S ribosomal protein L10chromosome CDS538799 498 + 0.493976
rplK y0480 50S ribosomal protein L11chromosome CDS537298 429 + 0.487179
rplL y0483 50S ribosomal subunit protein L7/L12chromosome CDS539363 369 + 0.468835
rplM y0134 50S ribosomal protein L13chromosome CDS145814 444 - 0.490991
rplN y3999 50S ribosomal protein L14chromosome CDS4447899 372 + 0.502688
rplO y4009 50S ribosomal protein L15chromosome CDS4451509 435 + 0.510345
rplP y3996 50S ribosomal protein L16chromosome CDS4446863 411 + 0.508516
rplQ y4016 50S ribosomal protein L17chromosome CDS4456049 390 + 0.54359
rplR y4006 50S ribosomal protein L18chromosome CDS4450452 354 + 0.516949
rplS y0897 50S ribosomal protein L19chromosome CDS1006245 348 + 0.477012
rplT y1905 50S ribosomal protein L20chromosome CDS2101942 357 + 0.498599
rplU y0672 50S ribosomal protein L21chromosome CDS756483 360 + 0.463889
rplV y3994 50S ribosomal protein L22chromosome CDS4445802 333 + 0.501502
rplW y3992 50S ribosomal protein L23chromosome CDS4444351 303 + 0.485149
rplX y4000 50S ribosomal protein L24chromosome CDS4448281 315 + 0.460317
rplY y2920 50S ribosomal protein L25chromosome CDS3226637 285 + 0.463158
rpmA y0673 50S ribosomal protein L27chromosome CDS756862 258 + 0.488372
rpmC y3998 50S ribosomal subunit protein L29chromosome CDS4447273 192 + 0.5
rpmD y4008 50S ribosomal protein L30chromosome CDS4451326 180 + 0.433333
rpmE y0299 50S ribosomal protein L31chromosome CDS319574 273 + 0.505495
rpmF y1753 50S ribosomal protein L32chromosome CDS1937327 168 + 0.553571
rpmG y0091 50S ribosomal protein L33chromosome CDS98285 168 - 0.392857
rpmH y4114 50S ribosomal protein L34chromosome CDS4567217 141 + 0.510638
rpsA y2781 30S ribosomal protein S1chromosome CDS3073855 1674 - 0.479092
rpsB y3137 30S ribosomal protein S2chromosome CDS3448704 810 - 0.47284
rpsC y3995 30S ribosomal protein S3chromosome CDS4446152 699 + 0.493562
rpsD y4014 30S ribosomal protein S4chromosome CDS4454373 621 + 0.478261
rpsE y4007 30S ribosomal protein S5chromosome CDS4450820 504 + 0.484127
rpsF y0645 30S ribosomal protein S6chromosome CDS729400 393 + 0.508906
rpsG y3984 30S ribosomal protein S7chromosome CDS4436821 471 + 0.47983
rpsH y4003 30S ribosomal protein S8chromosome CDS4449502 393 + 0.475827
rpsI y0133 30S ribosomal protein S9chromosome CDS145407 399 - 0.493734
rpsJ y3989 30S ribosomal protein S10chromosome CDS4442759 312 + 0.525641
rpsK y4013 30S ribosomal protein S11chromosome CDS4453953 390 + 0.502564
rpsL y3983 30S ribosomal protein S12chromosome CDS4436350 375 + 0.506667
rpsM y4012 30S ribosomal protein S13chromosome CDS4453580 357 + 0.504202
rpsN y4002 30S ribosomal protein S14chromosome CDS4449163 306 + 0.513072
rpsO y0691 30S ribosomal protein S15chromosome CDS776192 270 + 0.485185
rpsP y0894 30S ribosomal protein S16chromosome CDS1004567 249 + 0.502008
rpsR y0646 30S ribosomal protein S18chromosome CDS730123 228 + 0.473684
rpsT y3702 30S ribosomal protein S20chromosome CDS4115253 264 + 0.465909
rpsU y3535 30S ribosomal protein S21chromosome CDS3919191 216 + 0.462963
rsmC y3753 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4171842 1044 + 0.521073
rsuA y2917 16S pseudouridylate 516 synthasechromosome CDS3223497 708 - 0.519774
selB y4073 selenocysteinyl-tRNA-specific translation factorchromosome CDS4516344 1953 - 0.55658
serS y2796 seryl-tRNA synthetasechromosome CDS3095713 1293 - 0.491106
sfhB y0912 suppressor of ftsH mutationchromosome CDS1019458 978 + 0.482618
smpA y3076 small membrane protein Achromosome CDS3386972 351 + 0.45584
speG y1405 spermidine N1-acetyltransferasechromosome CDS1562612 546 - 0.39011
spoU y0104 RNA methylasechromosome CDS111081 693 + 0.496392
srmB y1287 ATP-dependent RNA helicasechromosome CDS1429871 1326 - 0.505279
sun y4021 hypothetical proteinchromosome CDS4459692 1290 - 0.460465
tccC1 y0190 toxin subunitchromosome CDS198944 2832 + 0.481992
tgt y0991 queuine tRNA-ribosyltransferasechromosome CDS1122032 1125 + 0.490667
thrS y1903 threonyl-tRNA synthetasechromosome CDS2099127 1929 + 0.473302
trmA y0324 tRNA (uracil-5-)-methyltransferasechromosome CDS351204 1104 - 0.477355
trmD y0896 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS1005367 798 + 0.518797
trpS y3940 tryptophanyl-tRNA synthetasechromosome CDS4394039 1041 + 0.48415
truA y1599 tRNA pseudouridine synthase Achromosome CDS1767991 882 + 0.50907
truB y0690 tRNA pseudouridine synthase Bchromosome CDS775096 975 + 0.494359
tsf y3135 elongation factor Tschromosome CDS3447719 858 - 0.480186
tuf y3986 elongation factor Tuchromosome CDS4439566 1185 + 0.481857
tuf y0477 elongation factor Tuchromosome CDS534742 1185 + 0.479325
tyrS y1966 tyrosyl-tRNA synthetasechromosome CDS2165848 1287 + 0.487956
valS y0743 valyl-tRNA synthetasechromosome CDS827335 2898 - 0.519669
ysuH y2639 siderophore biosynthetic proteinchromosome CDS2906820 582 - 0.484536
 
Yersinia pestis Nepal516, Nepal516
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPN_1552 ribonuclease Dchromosome CDS1764913 1161 + 0.477175
NA YPN_0457 methyltransferasechromosome CDS553609 1188 + 0.495791
NA YPN_3240 translation initiation factor IF2-2chromosome CDS3697039 2679 - 0.4972
NA YPN_3283 30S ribosomal protein S6chromosome CDS3741867 393 - 0.508906
NA YPN_2644 RNA methyltransferasechromosome CDS2981409 1131 - 0.521662
NA YPN_1697 translation initiation factor SUI1 family proteinchromosome CDS1913191 327 + 0.477064
NA YPN_3956 50S ribosomal protein L34chromosome CDS4501301 141 + 0.510638
NA YPN_3465 sigma N modulation factorchromosome CDS3950487 108 + 0.361111
NA YPN_0691 glutamyl-tRNA synthetasechromosome CDS810612 1155 - 0.500433
NA YPN_0218 50S ribosomal protein L7/L12chromosome CDS267347 369 + 0.468835
NA YPN_0217 50S ribosomal protein L10chromosome CDS266783 498 + 0.493976
NA YPN_3132 glutathione synthetasechromosome CDS3523101 960 + 0.491667
NA YPN_0510 tRNA nucleotidyltransferasechromosome CDS616988 1239 - 0.533495
NA YPN_0955 ribosomal protein L36chromosome CDS1109666 144 - 0.479167
NA YPN_3445 50S ribosomal protein L13chromosome CDS3932617 429 - 0.496504
NA YPN_2958 methionine aminopeptidasechromosome CDS3318931 792 + 0.488636
NA YPN_MT0023 hypothetical proteinpMT CDS24468 456 - 0.576754
NA YPN_0817 sigma 54 modulation proteinchromosome CDS946851 363 - 0.446281
NA YPN_3908 tryptophanyl-tRNA synthetasechromosome CDS4446332 1041 - 0.48415
NA YPN_1116 glutaminyl-tRNA synthetasechromosome CDS1282571 1668 + 0.495803
NA YPN_1196 ATP-dependent RNA helicasechromosome CDS1359772 1326 - 0.505279
NA YPN_1492 peptidyl-tRNA hydrolasechromosome CDS1694681 621 - 0.47182
NA YPN_1680 RNA pseudouridylate synthase-family proteinchromosome CDS1895139 1035 + 0.510145
NA YPN_3865 elongation factor Gchromosome CDS4401864 2109 - 0.480797
NA YPN_3239 ribosome-binding factor Achromosome CDS3696563 411 - 0.445255
NA YPN_2953 ribosome recycling factorchromosome CDS3315159 558 - 0.47491
NA YPN_3856 50S ribosomal protein l2chromosome CDS4395863 825 - 0.515152
NA YPN_3247 ribosomal RNA large subunit methyltransferase Jchromosome CDS3707087 630 - 0.455556
NA YPN_1499 peptide chain release factor 1chromosome CDS1700520 1083 + 0.514312
NA YPN_2038 ribonuclease Echromosome CDS2299700 3651 + 0.510819
NA YPN_0806 50S ribosomal protein L19chromosome CDS937181 348 + 0.477012
NA YPN_3851 50S ribosomal protein L29chromosome CDS4393893 192 - 0.5
NA YPN_3087 lysyl-tRNA synthetasechromosome CDS3469599 1518 - 0.479578
NA YPN_2181 tRNA pseudouridine synthase Achromosome CDS2465120 882 - 0.50907
NA YPN_3858 50S ribosomal protein L4chromosome CDS4397003 606 - 0.50165
NA YPN_3848 50S ribosomal protein L24chromosome CDS4392762 315 - 0.460317
NA YPN_0490 translational inhibitor proteinchromosome CDS599607 381 + 0.354331
NA YPN_2814 DEAD/DEAH box helicasechromosome CDS3168240 1356 - 0.517699
NA YPN_0819 ribosomal large subunit pseudouridine synthase Dchromosome CDS948435 978 + 0.482618
NA YPN_3866 30S ribosomal protein S7chromosome CDS4404066 471 - 0.47983
NA YPN_3281 30S ribosomal protein S18chromosome CDS3741309 228 - 0.473684
NA YPN_1239 SpoU-family rRNA methylasechromosome CDS1408458 774 + 0.502584
NA YPN_2554 ribosome modulation factorchromosome CDS2865094 168 - 0.511905
NA YPN_3846 30S ribosomal protein S14chromosome CDS4391889 306 - 0.513072
NA YPN_0491 translational inhibitor proteinchromosome CDS600272 405 + 0.511111
NA YPN_0896 queuine tRNA-ribosyltransferasechromosome CDS1049172 1125 + 0.490667
NA YPN_2037 ribosomal large subunit pseudouridine synthase Cchromosome CDS2298163 963 - 0.503634
NA YPN_3255 50S ribosomal protein L27chromosome CDS3714540 258 - 0.488372
NA YPN_1885 50S ribosomal protein L20chromosome CDS2130414 357 - 0.498599
NA YPN_3841 50S ribosomal protein L30chromosome CDS4389852 180 - 0.433333
NA YPN_1888 threonyl-tRNA synthetasechromosome CDS2131657 1929 - 0.473302
NA YPN_2601 seryl-tRNA synthetasechromosome CDS2931731 1293 - 0.491106
NA YPN_3806 ribonuclease PHchromosome CDS4355562 717 - 0.51325
NA YPN_3829 hypothetical proteinchromosome CDS4380376 1290 + 0.460465
NA YPN_0835 amidasechromosome CDS973475 1398 - 0.550072
NA YPN_3853 30S ribosomal protein S3chromosome CDS4394507 699 - 0.493562
NA YPN_0805 tRNA (guanine-N1)-methyltransferasechromosome CDS936360 741 + 0.523617
NA YPN_3860 30S ribosomal protein S10chromosome CDS4398287 312 - 0.525641
NA YPN_3828 methionyl-tRNA formyltransferasechromosome CDS4379335 948 + 0.470464
NA YPN_3780 methyltransferasechromosome CDS4332862 489 + 0.490798
NA YPN_2712 50S ribosomal protein L25chromosome CDS3062646 285 + 0.463158
NA YPN_0597 polyribonucleotide nucleotidyltransferasechromosome CDS706447 2196 + 0.498179
NA YPN_3237 30S ribosomal protein S15chromosome CDS3695198 270 - 0.485185
NA YPN_0505 30S ribosomal protein S21chromosome CDS612663 216 - 0.462963
NA YPN_1547 hypothetical proteinchromosome CDS1758570 345 - 0.486957
NA YPN_3864 elongation factor Tuchromosome CDS4400607 1185 - 0.481857
NA YPN_3444 30S ribosomal protein S9chromosome CDS3932210 393 - 0.493639
NA YPN_3466 hypothetical proteinchromosome CDS3950601 174 + 0.385057
NA YPN_2933 hypothetical proteinchromosome CDS3294101 441 - 0.489796
NA YPN_2610 translation initiation factor IF-1chromosome CDS2946730 219 + 0.497717
NA YPN_3859 50S ribosomal protein L3chromosome CDS4397625 630 - 0.488889
NA YPN_3700 Translation elongation factor, selenocysteine-specificchromosome CDS4245136 1953 - 0.55658
NA YPN_3852 50S ribosomal protein L16chromosome CDS4394084 411 - 0.508516
NA YPN_3843 50S ribosomal protein L18chromosome CDS4390552 354 - 0.516949
NA YPN_1993 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS2253944 1116 + 0.499104
NA YPN_3838 30S ribosomal protein S13chromosome CDS4387421 357 - 0.504202
NA YPN_3280 50S ribosomal protein L9chromosome CDS3740817 453 - 0.494481
NA YPN_0345 30S ribosomal protein S20chromosome CDS422290 264 - 0.465909
NA YPN_3844 50S ribosomal protein L6chromosome CDS4390915 534 - 0.513109
NA YPN_3925 heat shock protein 15chromosome CDS4464165 408 + 0.522059
NA YPN_3845 30S ribosomal protein S8chromosome CDS4391463 393 - 0.475827
NA YPN_0270 hypothetical proteinchromosome CDS337015 537 + 0.409683
NA YPN_0215 50S ribosomal protein L11chromosome CDS265282 429 + 0.487179
NA YPN_0298 ribosomal RNA small subunit methyltransferase Cchromosome CDS366906 1044 - 0.521073
NA YPN_0366 dimethyladenosine transferasechromosome CDS442168 819 - 0.47619
NA YPN_0695 2'-5' RNA ligasechromosome CDS813332 576 - 0.565972
NA YPN_3800 50S ribosomal protein L28chromosome CDS4350881 237 - 0.506329
NA YPN_0956 ribosomal proteinchromosome CDS1109825 261 - 0.467433
NA YPN_1477 hypothetical proteinchromosome CDS1681148 1074 - 0.485102
NA YPN_3472 hypothetical proteinchromosome CDS3954690 387 + 0.483204
NA YPN_1398 glutamyl-tRNA synthetasechromosome CDS1589677 1416 - 0.492232
NA YPN_1476 hypothetical proteinchromosome CDS1679452 906 - 0.40287
NA YPN_0690 poly(A) polymerasechromosome CDS809048 1476 - 0.523713
NA YPN_3256 50S ribosomal protein L21chromosome CDS3714817 312 - 0.455128
NA YPN_0255 hypothetical proteinchromosome CDS319811 438 + 0.488584
NA YPN_1491 hypothetical proteinchromosome CDS1693426 1092 - 0.495421
NA YPN_1216 zinc-binding proteinchromosome CDS1379199 564 + 0.537234
NA YPN_0599 cold-shock dead-box protein Achromosome CDS709838 1995 + 0.535338
NA YPN_3088 peptide chain release factor 2chromosome CDS3471126 933 - 0.46731
NA YPN_0804 16S rRNA processing proteinchromosome CDS935773 549 + 0.468124
NA YPN_1826 tyrosyl-tRNA synthetasechromosome CDS2062008 1275 - 0.488627
NA YPN_1518 ribosomal-protein-alanine acetyltransferasechromosome CDS1720573 585 + 0.483761
NA YPN_1260 histidyl-tRNA synthetasechromosome CDS1435273 1275 + 0.507451
NA YPN_2034 50S ribosomal protein L32chromosome CDS2296598 168 - 0.553571
NA YPN_0301 peptide chain release factor 3chromosome CDS369066 1590 + 0.497484
NA YPN_3855 30S ribosomal protein S19chromosome CDS4395570 279 - 0.505376
NA YPN_3957 ribonuclease P proteinchromosome CDS4501460 360 + 0.508333
NA YPN_0056 tRNA (uracil-5)-methyltransferasechromosome CDS79266 1104 - 0.477355
NA YPN_3847 50S ribosomal protein L5chromosome CDS4392208 540 - 0.488889
NA YPN_3644 periplasmic pectate lyase precursorchromosome CDS4176187 1719 - 0.4968
NA YPN_3850 30S ribosomal protein S17chromosome CDS4393639 255 - 0.466667
NA YPN_3743 50S ribosomal protein L31chromosome CDS4294630 216 - 0.490741
NA YPN_3799 50S ribosomal protein L33chromosome CDS4350702 168 - 0.392857
NA YPN_3867 30S ribosomal protein S12chromosome CDS4404633 375 - 0.506667
NA YPN_3837 30S ribosomal protein S11chromosome CDS4387015 390 - 0.502564
NA YPN_0712 hypothetical proteinchromosome CDS836442 126 + 0.507937
NA YPN_2806 Helicasechromosome CDS3162713 1005 - 0.514428
NA YPN_3290 methylasechromosome CDS3747959 741 - 0.538462
NA YPN_2341 DNA polymerase III, theta subunitchromosome CDS2622434 231 + 0.441558
NA YPN_1887 translation initiation factor IF-3chromosome CDS2131102 351 - 0.475783
NA YPN_3309 lysyl-tRNA synthetasechromosome CDS3773974 978 - 0.492843
NA YPN_1874 formyl transferasechromosome CDS2118323 2004 - 0.457585
NA YPN_3299 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3758471 942 - 0.511677
NA YPN_2931 prolyl-tRNA synthetasechromosome CDS3291481 1719 + 0.499127
NA YPN_0645 valyl-tRNA synthetasechromosome CDS755633 2898 - 0.519669
NA YPN_2803 hypothetical proteinchromosome CDS3159462 945 - 0.486772
NA YPN_0803 30S ribosomal protein S16chromosome CDS935503 249 + 0.502008
NA YPN_3854 50S ribosomal protein L22chromosome CDS4395223 333 - 0.501502
NA YPN_3823 hypothetical proteinchromosome CDS4375943 573 - 0.467714
NA YPN_0347 isoleucyl-tRNA synthetasechromosome CDS423938 2817 + 0.500887
NA YPN_3316 elongation factor Pchromosome CDS3779467 567 - 0.485009
NA YPN_2957 30S ribosomal protein S2chromosome CDS3317771 726 - 0.477961
NA YPN_3376 hypothetical proteinchromosome CDS3852560 1080 + 0.525
NA YPN_1961 YjgF-family lipoproteinchromosome CDS2218282 378 + 0.417989
NA YPN_3849 50S ribosomal protein L14chromosome CDS4393087 372 - 0.502688
NA YPN_3189 siderophore biosynthesis protein IucBchromosome CDS3595267 951 + 0.554154
NA YPN_3717 glycyl-tRNA synthetase beta subunitchromosome CDS4266799 2070 - 0.523188
NA YPN_3857 50S ribosomal protein L23chromosome CDS4396704 303 - 0.485149
NA YPN_2964 hypothetical proteinchromosome CDS3325253 774 - 0.48708
NA YPN_1308 spermidine acetyltransferasechromosome CDS1492534 546 - 0.39011
NA YPN_2894 hypothetical proteinchromosome CDS3256029 342 + 0.459064
NA YPN_2591 L-asparaginase II precursorchromosome CDS2918842 1038 - 0.467245
NA YPN_3373 hypothetical proteinchromosome CDS3849553 1062 + 0.490584
NA YPN_0216 50S ribosomal protein L1chromosome CDS265714 705 + 0.47234
NA YPN_2565 asparaginyl-tRNA synthetasechromosome CDS2881825 1401 + 0.498929
NA YPN_1679 hypothetical proteinchromosome CDS1894155 621 + 0.460548
NA YPN_1883 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2128932 984 - 0.47561
NA YPN_2347 ATP-dependent RNA helicasechromosome CDS2628036 1383 - 0.501085
NA YPN_0895 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1047994 1086 + 0.512891
NA YPN_0499 hypothetical proteinchromosome CDS606690 471 + 0.422505
NA YPN_0789 alanyl-tRNA synthetasechromosome CDS921215 2628 + 0.5
NA YPN_0827 tRNA/rRNA methyltransferasechromosome CDS965178 1167 + 0.533847
NA YPN_3836 30S ribosomal protein S4chromosome CDS4386364 621 - 0.478261
NA YPN_1523 arginyl-tRNA synthetasechromosome CDS1731717 1731 - 0.498556
NA YPN_3353 hypothetical proteinchromosome CDS3821494 1038 - 0.519268
NA YPN_1530 aspartyl-tRNA synthetasechromosome CDS1740232 1797 + 0.510295
NA YPN_3248 hypothetical proteinchromosome CDS3707863 294 + 0.438776
NA YPN_3238 tRNA pseudouridine synthase Bchromosome CDS3695589 975 - 0.494359
NA YPN_3516 ribosomal protein L11 methyltransferasechromosome CDS4014173 915 + 0.53224
NA YPN_3842 30S ribosomal protein S5chromosome CDS4390034 504 - 0.484127
NA YPN_2694 elongation factor Pchromosome CDS3040615 573 + 0.460733
NA YPN_1991 pseudouridine synthasechromosome CDS2252692 627 + 0.492823
NA YPN_0371 ribosomal large subunit pseudouridine synthase Achromosome CDS448988 621 - 0.489533
NA YPN_2710 ribosomal small subunit pseudouridine synthase Achromosome CDS3059506 708 - 0.519774
NA YPN_2585 30S ribosomal protein S1chromosome CDS2909858 1674 - 0.479092
NA YPN_1017 cysteinyl-tRNA synthetasechromosome CDS1175645 1386 + 0.497835
NA YPN_0211 Translation elongation factor Tuchromosome CDS262725 1011 + 0.476756
NA YPN_3718 glycyl-tRNA synthetase alpha subunitchromosome CDS4268878 915 - 0.527869
NA YPN_0974 glucose-1-phosphate cytidylyltransferasechromosome CDS1131264 786 + 0.437659
NA YPN_2449 siderophore biosynthetic enzymechromosome CDS2742171 579 - 0.483592
NA YPN_2196 hypothetical proteinchromosome CDS2481793 933 - 0.488746
NA YPN_3502 ribonuclease Gchromosome CDS3998021 1470 - 0.476871
NA YPN_1106 tRNA-thiotransferasechromosome CDS1268831 1440 - 0.48125
NA YPN_1627 L-asparaginase Ichromosome CDS1838658 1017 - 0.476893
NA YPN_3517 hypothetical proteinchromosome CDS4015676 966 + 0.518634
NA YPN_0094 DEAD-box helicasechromosome CDS128478 1287 - 0.486402
NA YPN_1500 protoporphyrinogen oxidasechromosome CDS1701602 831 + 0.535499
NA YPN_0339 hypothetical proteinchromosome CDS412822 2448 - 0.35335
NA YPN_1095 leucyl-tRNA synthetasechromosome CDS1256956 2583 - 0.510647
NA YPN_2956 elongation factor Tschromosome CDS3316786 858 - 0.480186
NA YPN_0212 elongation factor Tuchromosome CDS263737 174 + 0.488506
NA YPN_3827 polypeptide deformylasechromosome CDS4378798 513 + 0.452242
NA YPN_1886 50S ribosomal protein L35chromosome CDS2130808 198 - 0.459596
NA YPN_3840 50S ribosomal protein L15chromosome CDS4389414 435 - 0.510345
NA YPN_3834 50S ribosomal protein L17chromosome CDS4384919 390 - 0.54359
NA YPN_3813 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS4363498 693 + 0.496392
NA YPN_0756 methionine aminopeptidasechromosome CDS883328 786 - 0.510178
 
Yersinia pestis biovar Microtus str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP_2953 hypothetical proteinchromosome CDS3287948 513 + 0.419103
NA YP_1644 hypothetical proteinchromosome CDS1794689 582 - 0.489691
NA YP_2534 putative zinc-binding proteinchromosome CDS2803922 564 + 0.537234
NA YP_3781 hypothetical proteinchromosome CDS4306716 537 - 0.409683
NA YP_0579 Predicted RNA-binding protein containing KH domain, possibly ribosomal proteinchromosome CDS618458 294 - 0.438776
NA YP_1843 hypothetical proteinchromosome CDS2053262 906 - 0.40287
NA YP_3714 hypothetical proteinchromosome CDS4228973 2448 + 0.35335
NA YP_0448 hypothetical proteinchromosome CDS472978 1080 - 0.525
NA YP_0652 putative yhbH sigma 54 modulatorchromosome CDS697620 465 - 0.434409
NA YP_3892 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 familychromosome CDS4430254 1068 + 0.5103
NA YP_0451 hypothetical proteinchromosome CDS476003 1062 - 0.490584
NA YP_0472 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 familychromosome CDS504072 1038 + 0.519268
NA YP_3851 hypothetical proteinchromosome CDS4377138 645 - 0.415504
NA YP_1858 Predicted GTPasechromosome CDS2067235 1092 - 0.495421
NA YP_pMT023 hypothetical proteinpMT1 CDS23753 897 - 0.560758
NA YP_0963 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 familychromosome CDS1038350 945 - 0.486772
NA YP_0517 lysyl-tRNA synthetasechromosome CDS551708 978 + 0.492843
alaS YP_0381 alanyl-tRNA synthetasechromosome CDS404184 2628 + 0.5
alcB YP_1420 putative siderophore biosynthetic enzymechromosome CDS1569127 546 + 0.485348
ampM YP_2808 methionine aminopeptidasechromosome CDS3118154 792 + 0.488636
ansA YP_1961 cytoplasmic asparaginase Ichromosome CDS2179170 1017 - 0.476893
ansB YP_1207 putative L-asparaginase II precursorchromosome CDS1311148 1038 - 0.467245
argS YP_1889 arginyl-tRNA synthetasechromosome CDS2105492 1731 - 0.499133
asnS YP_1181 asparaginyl-tRNA synthetasechromosome CDS1274133 1401 + 0.498929
aspS YP_1896 aspartyl-tRNA synthetasechromosome CDS2114019 1797 + 0.510851
cafA YP_3877 ribonuclease Gchromosome CDS4412949 1470 - 0.476871
cca YP_2965 tRNA nucleotidyltransferasechromosome CDS3299482 1239 - 0.533495
cspR YP_0071 putative methyltransferasechromosome CDS80243 489 - 0.490798
cysS YP_0852 cysteinyl-tRNA synthetasechromosome CDS923548 1431 + 0.494759
dbpA YP_1617 ATP-dependent RNA helicasechromosome CDS1765122 1383 - 0.501085
ddhA YP_0815 glucose-1-phosphate cytidylyltransferasechromosome CDS881243 786 + 0.437659
deaD YP_0595 inducible ATP-independent RNA helicasechromosome CDS636422 2010 + 0.535323
def YP_0240 peptide deformylasechromosome CDS239655 513 - 0.452242
dtd YP_0030 D-tyrosyl-tRNA deacylasechromosome CDS38620 438 + 0.488584
efp1 YP_0510 elongation factor Pchromosome CDS546560 633 + 0.478673
efp2 YP_1307 elongation factor Pchromosome CDS1430904 642 + 0.457944
fmt YP_0239 methionyl-tRNA formyltransferasechromosome CDS238683 948 - 0.470464
frr YP_2804 ribosome releasing factorchromosome CDS3114382 558 - 0.47491
ftsJ YP_0580 ribosomal RNA large subunit methyltransferase Jchromosome CDS618886 642 + 0.453271
fusA YP_0201 elongation factor Gchromosome CDS214993 2109 + 0.480797
gatA YP_0671 amidasechromosome CDS724244 1398 - 0.550072
glnS1 YP_0287 glutamyl-tRNA synthetasechromosome CDS294342 1155 - 0.501299
glnS2 YP_1084 glutaminyl-tRNA synthetasechromosome CDS1161488 1758 - 0.493174
gltX YP_2609 glutamyl-tRNA synthetasechromosome CDS2892867 1416 + 0.492232
glyQ YP_3982 glycyl-tRNA synthetase alpha subunitchromosome CDS4534384 915 - 0.527869
glyS YP_3981 glycyl-tRNA synthetase beta subunitchromosome CDS4532305 2070 - 0.523188
gshB YP_3507 glutathione synthetasechromosome CDS3992432 960 - 0.491667
hemK1 YP_1866 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2075410 831 + 0.535499
hemK2 YP_2413 Predicted rRNA or tRNA methylasechromosome CDS2682746 1002 - 0.48004
hisS YP_2744 histidyl-tRNA synthetasechromosome CDS3044397 1275 - 0.507451
holE YP_1611 DNA polymerase III, theta subunitchromosome CDS1759520 231 + 0.441558
hslR YP_0141 heat shock protein 15chromosome CDS154484 408 - 0.522059
ileS YP_3705 isoleucyl-tRNA synthetasechromosome CDS4217488 2817 - 0.500887
infA YP_1223 translation initiation factor IF-1chromosome CDS1337052 219 + 0.497717
infB YP_0587 translation initiation factor IF-2chromosome CDS626897 2679 + 0.4972
infC YP_2220 protein chain initiation factor IF-3chromosome CDS2469177 351 - 0.475783
iucB YP_3449 putative siderophore biosynthesis protein IucBchromosome CDS3918999 951 - 0.554154
ksgA YP_3687 dimethyladenosine transferasechromosome CDS4201967 819 + 0.47619
lasT YP_2556 putative SpoU-family rRNA methylasechromosome CDS2831207 774 + 0.502584
leuS YP_1103 leucyl-tRNA synthetasechromosome CDS1185466 2583 + 0.510647
ligT YP_0290 putative 2'-5' RNA ligasechromosome CDS297062 576 - 0.565972
lysS YP_3584 lysyl-tRNA synthetasechromosome CDS4076685 1518 - 0.479578
map YP_0350 methionine aminopeptidasechromosome CDS367013 786 - 0.510178
mhpC2 YP_1844 hypothetical proteinchromosome CDS2054958 1074 - 0.485102
miaA YP_0528 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS567203 942 + 0.511677
miaB YP_1093 putative tRNA-thiotransferasechromosome CDS1174635 1539 + 0.482131
pcnB YP_0286 poly(A) polymerasechromosome CDS292778 1422 - 0.525316
pelY YP_3357 periplasmic pectate lyase precursorchromosome CDS3759484 1719 - 0.4968
pheS YP_2216 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2467007 984 - 0.47561
pnp YP_0593 polyribonucleotide nucleotidyltransferasechromosome CDS633028 2214 + 0.498645
prfA YP_1865 peptide chain release factor 1chromosome CDS2074328 1083 + 0.514312
prfB1 YP_2783 hypothetical proteinchromosome CDS3093324 441 - 0.489796
prfB2 YP_3585 peptide chain release factor RF-2chromosome CDS4078212 933 - 0.46731
prfC YP_3751 peptide chain release factor 3chromosome CDS4273611 1590 - 0.497484
prmA YP_3891 ribosomal protein L11 methyltransferasechromosome CDS4428847 921 + 0.53203
proS YP_2781 prolyl-tRNA synthetasechromosome CDS3090704 1719 + 0.499127
pth YP_1859 peptidyl-tRNA hydrolasechromosome CDS2068490 621 - 0.47182
queA YP_0739 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS800624 1071 + 0.513539
rbfA YP_0588 ribosome-binding factor Achromosome CDS629587 465 + 0.453763
relE YP_3582 hypothetical proteinchromosome CDS4073930 261 - 0.394636
rhlB YP_3176 ATP-dependent RNA helicasechromosome CDS3544289 1269 - 0.484634
rimJ YP_1884 ribosomal-protein-alanine acetyltransferasechromosome CDS2094387 585 + 0.483761
rimL YP_1699 putative acetyltransferasechromosome CDS1876792 900 + 0.438889
rimM YP_0392 16S rRNA-processing proteinchromosome CDS415926 561 + 0.467023
rluA1 YP_2262 ribosomal large subunit pseudouridine synthaseCchromosome CDS2507134 963 - 0.503634
rluA2 YP_2813 Pseudouridylate synthase, 23S RNA-specificchromosome CDS3123765 774 - 0.48708
rluA3 YP_3682 ribosomal large subunit pseudouridine synthase Achromosome CDS4195345 621 + 0.489533
rluD YP_0654 ribosomal large subunit pseudouridine synthase Dchromosome CDS699204 978 + 0.48364
rmf YP_1169 putative ribosome modulation factorchromosome CDS1257369 168 - 0.511905
rnd YP_1918 ribonuclease Dchromosome CDS2138185 1161 + 0.477175
rne YP_2263 ribonuclease Echromosome CDS2508671 3666 + 0.510638
rnpA YP_4008 ribonuclease Pchromosome CDS4561695 360 + 0.508333
rph YP_0045 ribonuclease PHchromosome CDS57315 717 + 0.51325
rplA YP_3113 50S ribosomal protein L1chromosome CDS3467253 705 - 0.47234
rplB YP_0210 50S ribosomal protein L2chromosome CDS222278 825 + 0.515152
rplC YP_0207 50S ribosomal protein L3chromosome CDS220711 630 + 0.488889
rplD YP_0208 50S ribosomal protein L4chromosome CDS221357 606 + 0.50165
rplE YP_0219 50S ribosomal protein L5chromosome CDS226218 540 + 0.488889
rplF YP_0222 50S ribosomal protein L6chromosome CDS227517 534 + 0.513109
rplI YP_0545 50S ribosomal protein L9chromosome CDS583387 453 + 0.494481
rplJ YP_3112 50S ribosomal protein L10chromosome CDS3466391 498 - 0.493976
rplK YP_3114 50S ribosomal protein L11chromosome CDS3467961 429 - 0.487179
rplL YP_3111 Ribosomal protein L7/L12chromosome CDS3465956 288 - 0.479167
rplM YP_3818 50S ribosomal protein L13chromosome CDS4347548 444 - 0.490991
rplN YP_0217 50S ribosomal protein L14chromosome CDS225507 372 + 0.502688
rplO YP_0226 50S ribosomal protein L15chromosome CDS229117 435 + 0.510345
rplP YP_0214 50S ribosomal protein L16chromosome CDS224471 411 + 0.508516
rplQ YP_0233 50S ribosomal protein L17chromosome CDS233657 390 + 0.54359
rplR YP_0223 50S ribosomal protein L18chromosome CDS228060 354 + 0.516949
rplS YP_0394 50S ribosomal protein L19chromosome CDS417346 348 + 0.477012
rplT YP_2218 50S ribosomal protein L20chromosome CDS2468489 357 - 0.498599
rplU YP_0571 50S ribosomal protein L21chromosome CDS611438 360 + 0.463889
rplV YP_0212 50S ribosomal protein L22chromosome CDS223410 333 + 0.501502
rplW YP_0209 50S ribosomal protein L23chromosome CDS221959 303 + 0.485149
rplX YP_0218 50S ribosomal protein L24chromosome CDS225889 315 + 0.460317
rplY YP_1324 50S ribosomal protein L25chromosome CDS1453003 285 + 0.463158
rpmA YP_0572 50S ribosomal protein L27chromosome CDS611817 258 + 0.488372
rpmB YP_0051 50S ribosomal protein L28chromosome CDS62476 237 + 0.506329
rpmC YP_0215 50S ribosomal protein L29chromosome CDS224881 192 + 0.5
rpmD YP_0225 50S ribosomal protein L30chromosome CDS228934 180 + 0.433333
rpmE1 YP_0112 50S ribosomal protein L31chromosome CDS120715 216 + 0.490741
rpmE2 YP_0797 50S ribosomal protein L31chromosome CDS859770 324 - 0.429012
rpmF YP_2259 50S ribosomal protein L32chromosome CDS2505569 168 - 0.553571
rpmG YP_0052 50S ribosomal protein L33chromosome CDS62724 168 + 0.392857
rpmH YP_4007 50S ribosomal protein L34chromosome CDS4561536 141 + 0.510638
rpmI YP_2219 50S ribosomal protein L35chromosome CDS2468883 198 - 0.459596
rpmJ1 YP_0228 50S ribosomal protein L36chromosome CDS230924 117 + 0.444444
rpmJ2 YP_0796 50S ribosomal protein L36chromosome CDS859611 144 - 0.479167
rpsA YP_1201 30S ribosomal protein S1chromosome CDS1302163 1674 - 0.479092
rpsB YP_2807 30S ribosomal protein S2chromosome CDS3116994 810 - 0.47284
rpsC YP_0213 30S ribosomal protein S3chromosome CDS223760 699 + 0.493562
rpsD YP_0231 30S ribosomal protein S4chromosome CDS231981 621 + 0.478261
rpsE YP_0224 30S ribosomal protein S5chromosome CDS228428 504 + 0.484127
rpsF YP_0542 30S ribosomal protein S6chromosome CDS582397 393 + 0.508906
rpsG YP_0200 30S ribosomal protein S7chromosome CDS214429 471 + 0.47983
rpsH YP_0221 30S ribosomal protein S8chromosome CDS227110 393 + 0.475827
rpsI YP_3817 30S ribosomal protein S9chromosome CDS4347141 399 - 0.493734
rpsJ YP_0206 30S ribosomal protein S10chromosome CDS220367 312 + 0.525641
rpsK YP_0230 30S ribosomal protein S11chromosome CDS231561 390 + 0.502564
rpsL YP_0199 30S ribosomal protein S12chromosome CDS213958 375 + 0.506667
rpsM YP_0229 30S ribosomal protein S13chromosome CDS231188 357 + 0.504202
rpsN YP_0220 30S ribosomal protein S14chromosome CDS226771 306 + 0.513072
rpsO YP_0590 30S ribosomal protein S15chromosome CDS631147 270 + 0.485185
rpsP YP_0391 30S ribosomal protein S16chromosome CDS415668 249 + 0.502008
rpsQ YP_0216 30S ribosomal protein S17chromosome CDS225072 255 + 0.466667
rpsR YP_0544 30S ribosomal protein S18chromosome CDS583120 228 + 0.473684
rpsS YP_0211 30S ribosomal protein S19chromosome CDS223117 279 + 0.505376
rpsT YP_3708 30S ribosomal protein S20chromosome CDS4221689 264 + 0.465909
rpsU YP_2960 30S ribosomal protein S21chromosome CDS3295286 216 - 0.462963
rsmC YP_3754 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4276317 1044 + 0.521073
rsmC1 YP_2908 putative methyltransferasechromosome CDS3228845 1191 + 0.496222
rsuA1 YP_1322 ribosomal small subunit pseudouridine synthase Achromosome CDS1449863 708 - 0.519774
rsuA2 YP_1770 putative pseudouridine synthasechromosome CDS1961708 627 - 0.492823
rsuA3 YP_2010 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthasechromosome CDS2232350 1035 + 0.510145
sUA5A YP_0244 Putative translation factor (SUA5)chromosome CDS242450 573 + 0.467714
sUA5B YP_2009 Putative translation factor (SUA5)chromosome CDS2231400 621 + 0.460548
sUI1 YP_2027 hypothetical proteinchromosome CDS2250401 327 + 0.477064
serS YP_1214 seryl-tRNA synthetasechromosome CDS1322053 1293 - 0.491106
smpA YP_1052 hypothetical proteinchromosome CDS1135075 351 + 0.45584
speG YP_2698 spermidine acetyltransferasechromosome CDS2987542 546 + 0.39011
spoU YP_0537 putative methylasechromosome CDS577916 741 + 0.538462
srmB1 YP_0973 Superfamily II DNA and RNA helicaseschromosome CDS1047128 1413 - 0.515216
srmB2 YP_2512 ATP-dependent RNA helicasechromosome CDS2782536 1326 - 0.505279
sun YP_0238 tRNA and rRNA cytosine-C5-methylasechromosome CDS237300 1308 - 0.458716
tccC1 YP_3871 putative toxin subunitchromosome CDS4400692 2832 + 0.481992
tdcF1 YP_1799 YjgF-family lipoproteinchromosome CDS1996392 408 - 0.426471
tdcF2 YP_1913 Putative translation initiation inhibitorchromosome CDS2132352 345 - 0.486957
tdcF3 YP_2944 putative translational inhibitor proteinchromosome CDS3280906 381 + 0.354331
tdcF4 YP_2945 putative translational inhibitor proteinchromosome CDS3281571 405 + 0.511111
tdcF5 YP_3844 Putative translation initiation inhibitorchromosome CDS4369582 426 + 0.476526
tgt YP_0740 queuine tRNA-ribosyltransferasechromosome CDS801787 1125 + 0.490667
thrS YP_2221 threonyl-tRNA synthetasechromosome CDS2469732 1929 - 0.473302
trmA1 YP_1257 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1371718 1131 - 0.521662
trmA2 YP_3137 tRNA (uracil-5-)-methyltransferasechromosome CDS3496414 1104 - 0.477355
trmD YP_0393 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS416468 798 + 0.518797
trmH YP_0038 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS49403 693 - 0.496392
trmU YP_1768 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1959967 1116 - 0.499104
trpS YP_0159 tryptophanyl-tRNA synthetasechromosome CDS171765 960 + 0.482292
truA YP_2398 tRNA pseudouridine synthase Achromosome CDS2666072 882 - 0.50907
truB YP_0589 tRNA pseudouridine synthase Bchromosome CDS630051 975 + 0.494359
tsf YP_2806 elongation factor Tschromosome CDS3116009 858 - 0.480186
tuf YP_0202 elongation factor Tuchromosome CDS217174 1185 + 0.481857
tuf YP_3117 elongation factor Tuchromosome CDS3469761 1185 - 0.478481
tyrS YP_2155 tyrosyl-tRNA synthetasechromosome CDS2398334 1287 - 0.487956
valS YP_0641 valyl-tRNA synthetasechromosome CDS682583 2898 - 0.519669
wcaG9 YP_2207 hypothetical proteinchromosome CDS2456398 2004 - 0.457086
yfiF YP_0662 putative tRNA/rRNA methyltransferasechromosome CDS715932 1182 + 0.532995
yhbH YP_3838 chromosome pseudo4365532 174 + 0.385057
 
Yersinia pestis biovar Orientalis str. IP275, IP275
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YpIP275_pIP1202_0129 hypothetical proteinpIP1202 CDS104663 501 + 0.473054
NA YpIP275_pIP1202_0002 hypothetical proteinpIP1202 CDS867 288 + 0.572917
aphA YpIP275_pIP1202_0052 aminoglycoside 3'-phosphotransferasepIP1202 CDS32222 816 - 0.441176
strA YpIP275_pIP1202_0055 streptomycin resistance protein ApIP1202 CDS34715 804 + 0.562189
 
Yersinia pseudotuberculosis IP 32953, IP32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB0433 putative methylasechromosome CDS518924 741 + 0.539811
NA YPTB3470 putative methyltransferasechromosome CDS4132209 1188 - 0.495791
NA YPTB1588 hypothetical proteinchromosome CDS1916426 501 - 0.500998
NA YPTB2053 hypothetical proteinchromosome CDS2418938 345 - 0.486957
NA YPTB3576 hypothetical proteinchromosome CDS4257310 966 + 0.518634
NA YPTB1216 hypothetical proteinchromosome CDS1450275 945 + 0.485714
NA YPTB3667 hypothetical proteinchromosome CDS4379306 1290 + 0.45969
NA YPTB1138 hypothetical proteinchromosome CDS1361444 351 - 0.452991
NA YPTB3164 peptide chain release factor 2chromosome CDS3721212 1101 - 0.470481
NA YPTB1989 hypothetical proteinchromosome CDS2345338 1074 - 0.485102
NA YPTB0067 putative methyltransferasechromosome CDS78059 489 - 0.490798
NA YPTB0372 hypothetical proteinchromosome CDS444663 1038 + 0.521195
NA YPTB0348 hypothetical proteinchromosome CDS413523 1080 - 0.525926
NA YPTB1058 hypothetical proteinchromosome CDS1265226 873 + 0.495991
NA YPTB0862 amidasechromosome CDS1038943 1398 - 0.547926
NA YPTB0981 50S ribosomal protein L36chromosome CDS1178247 144 - 0.479167
NA YPTB1366 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1627424 1131 + 0.523431
NA YPTB2633 hypothetical proteinchromosome CDS3110596 1002 - 0.482036
NA YPTB2881 putative zinc-binding proteinchromosome CDS3413275 564 - 0.537234
NA YPTB0540 hypothetical proteinchromosome CDS639266 537 + 0.409683
NA YPTB1786 hypothetical proteinchromosome CDS2137092 507 - 0.47929
NA YPTB2134 hypothetical proteinchromosome CDS2509758 621 + 0.462158
NA YPTB3148 hypothetical proteinchromosome CDS3706022 456 + 0.506579
NA YPTB0351 hypothetical proteinchromosome CDS416548 1062 - 0.490584
NA YPTB1953 putative acetyltransferasechromosome CDS2298444 900 + 0.44
NA YPTB3126 possible bacteriophage proteinchromosome CDS3687212 261 - 0.394636
NA YPTB1826 bacteriophage hypothetical proteinchromosome CDS2172947 375 + 0.512
NA YPTB2980 hypothetical proteinchromosome CDS3518392 441 - 0.487528
NA YPTB2135 putative RNA pseudouridylate synthase-family proteinchromosome CDS2510708 1035 + 0.510145
NA YPTB0154 probable phage antitermination protein Qchromosome CDS183509 372 + 0.38172
NA YPTB2150 hypothetical proteinchromosome CDS2528772 327 + 0.477064
NA YPTB2861 putative SpoU-family rRNA methylasechromosome CDS3386322 774 - 0.502584
NA YPTB3428 putative translational inhibitor proteinchromosome CDS4070682 381 - 0.356955
NA YPTB2006 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2362192 831 + 0.533093
NA YPTB3661 hypothetical proteinchromosome CDS4374873 573 - 0.467714
NA YPTB1316 elongation factor Pchromosome CDS1568639 573 - 0.462478
NA YPTB3533 hypothetical proteinchromosome CDS4199134 387 + 0.485788
NA YPTB1988 hypothetical proteinchromosome CDS2343653 906 - 0.399558
NA YPTB0028 D-tyrosyl-tRNA deacylasechromosome CDS38201 438 + 0.488584
NA YPTB3421 hypothetical proteinchromosome CDS4063471 471 - 0.422505
NA YPTB1832 hypothetical proteinchromosome CDS2182663 1668 + 0.465827
NA YPTB3427 putative translational inhibitor proteinchromosome CDS4069993 405 - 0.511111
NA YPTB0472 hypothetical proteinchromosome CDS556872 294 - 0.438776
NA YPTB3009 hypothetical proteinchromosome CDS3548823 774 - 0.485788
alaS YPTB0825 alanyl-tRNA synthetasechromosome CDS990643 2628 + 0.501522
alcB YPTB1543 putative siderophore biosynthetic enzymechromosome CDS1857537 579 + 0.483592
ampM YPTB3004 methionine aminopeptidasechromosome CDS3543212 792 + 0.486111
ansA YPTB2087 cytoplasmic asparaginase Ichromosome CDS2457340 1017 - 0.476893
ansB YPTB1411 putative L-asparaginase II precursorchromosome CDS1687428 1038 + 0.471098
argS YPTB2029 arginyl-tRNA synthetasechromosome CDS2392130 1731 - 0.501444
asnS YPTB1436 asparaginyl-tRNA synthetasechromosome CDS1723497 1401 - 0.499643
aspS YPTB2036 aspartyl-tRNA synthetasechromosome CDS2400515 1797 + 0.510851
cafA YPTB3561 ribonuclease Gchromosome CDS4239530 1470 - 0.476871
cca YPTB3411 tRNA nucleotidyltransferasechromosome CDS4052402 1239 + 0.534302
cysS YPTB1035 cysteinyl-tRNA synthetasechromosome CDS1242263 1386 + 0.497114
dbpA YPTB1652 ATP-dependent RNA helicasechromosome CDS2004668 1383 + 0.501085
ddhA YPTB0999 glucose-1-phosphate cytidylyltransferasechromosome CDS1199878 786 + 0.436387
deaD YPTB0486 cold-shock dead-box protein Achromosome CDS573404 1995 + 0.535338
def YPTB3665 peptide deformylasechromosome CDS4377728 513 + 0.452242
efp YPTB0408 elongation factor Pchromosome CDS487175 567 + 0.485009
eif YPTB0877 putative translation initiation factor EIF-2B, GDP-GTP exchange factor (alpha subunit)chromosome CDS1051684 1041 - 0.554275
fmt YPTB3666 methionyl-tRNA formyltransferasechromosome CDS4378265 948 + 0.470464
frr YPTB3000 ribosome releasing factorchromosome CDS3539439 558 - 0.476703
ftsJ YPTB0473 ribosomal RNA large subunit methyltransferase Jchromosome CDS557312 630 + 0.457143
fusA YPTB3703 elongation factor Gchromosome CDS4400067 2109 - 0.481271
glnS YPTB1121 glutaminyl-tRNA synthetasechromosome CDS1344738 1668 + 0.496403
gltX YPTB2707 glutamyl-tRNA synthetasechromosome CDS3199412 1416 + 0.490819
glyQ YPTB3915 glycyl-tRNA synthetase alpha subunitchromosome CDS4672581 915 + 0.528962
glyS YPTB3916 glycyl-tRNA synthetase beta subunitchromosome CDS4673505 2070 + 0.520773
gshB YPTB3207 glutathione synthetasechromosome CDS3773054 960 + 0.491667
hisS YPTB2840 histidyl-tRNA synthetasechromosome CDS3355005 1275 - 0.507451
holE YPTB1658 DNA polymerase III, theta subunitchromosome CDS2011422 231 - 0.441558
hslR YPTB3760 heat shock protein 15chromosome CDS4462529 408 + 0.522059
ileS YPTB0617 isoleucyl-tRNA synthetasechromosome CDS732045 2817 + 0.500887
infA YPTB1395 translation initiation factor IF-1chromosome CDS1662279 219 - 0.497717
infB YPTB0480 translation initiation factor IF-2chromosome CDS565311 2679 + 0.4972
infC YPTB2341 translation initiation factor IF-3chromosome CDS2762651 552 - 0.476449
iucB YPTB3264 putative siderophore biosynthesis protein IucBchromosome CDS3845368 951 + 0.562566
ksgA YPTB0633 dimethyladenosine transferasechromosome CDS749445 819 - 0.478632
leuS YPTB1103 leucyl-tRNA synthetasechromosome CDS1319842 2583 - 0.510647
ligT YPTB0736 putative 2'-5' RNA ligasechromosome CDS881937 576 - 0.567708
lysS YPTB3163 lysyl-tRNA synthetasechromosome CDS3719685 1518 - 0.479578
map YPTB0794 methionine aminopeptidasechromosome CDS953280 786 - 0.510178
miaA YPTB0424 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS508187 942 + 0.510616
miaB YPTB1113 putative tRNA-thiotransferasechromosome CDS1331702 1425 - 0.484912
pcnB YPTB0732 poly(A) polymerase Ichromosome CDS877611 1314 - 0.519026
pelY YPTB3834 periplasmic pectate lyase precursorchromosome CDS4576508 1719 - 0.497964
pheS YPTB2337 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2760481 984 - 0.473577
pmrI YPTB2328 hypothetical proteinchromosome CDS2749875 2004 - 0.456587
pnp YPTB0484 polyribonucleotide nucleotidyltransferasechromosome CDS570094 2115 + 0.499764
poxA YPTB0414 lysyl-tRNA synthetasechromosome CDS492257 978 + 0.493865
prfA YPTB2005 peptide chain release factor 1chromosome CDS2361110 1083 + 0.515235
prfC YPTB0575 peptide chain release factor 3chromosome CDS677036 1590 + 0.495597
prmA YPTB3575 ribosomal protein L11 methyltransferasechromosome CDS4255807 915 + 0.53224
proS YPTB2978 prolyl-tRNA synthetasechromosome CDS3515772 1719 + 0.499709
pth YPTB1999 peptidyl-tRNA hydrolasechromosome CDS2355271 591 - 0.472081
queA YPTB0927 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1120581 1071 + 0.512605
rbfA YPTB0481 ribosome-binding factor Achromosome CDS568055 411 + 0.445255
rhlB YPTB0165 ATP-dependent RNA helicasechromosome CDS197253 1287 - 0.487956
rhlE YPTB1214 putative ATP-dependent RNA helicase rhlEchromosome CDS1447324 1356 + 0.519174
rimJ YPTB2023 ribosomal-protein-alanine acetyltransferasechromosome CDS2381013 585 + 0.483761
rimM YPTB0835 16S rRNA-processing proteinchromosome CDS1002578 549 + 0.466302
rluA YPTB0638 23S rRNA pseudouridylate 746 synthasechromosome CDS756284 621 - 0.489533
rluC YPTB2478 ribosomal large subunit pseudouridine synthase Cchromosome CDS2921500 963 - 0.502596
rluD YPTB0846 pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA)chromosome CDS1013823 978 + 0.48364
rmf YPTB1448 putative ribosome modulation factorchromosome CDS1741530 168 + 0.511905
rnd YPTB2058 ribonuclease Dchromosome CDS2425331 1122 + 0.481283
rne YPTB2479 ribonuclease Echromosome CDS2923037 3693 + 0.507176
rnpA YPTB3946 ribonuclease Pchromosome CDS4711522 360 + 0.508333
rpS10 YPTB3699 30S ribosomal protein S10chromosome CDS4397217 312 - 0.525641
rph YPTB0041 ribonuclease PHchromosome CDS55054 717 + 0.51325
rplA YPTB0280 50S ribosomal protein L1chromosome CDS333806 705 + 0.47234
rplB YPTB3695 50S ribosomal protein L2chromosome CDS4394793 825 - 0.515152
rplC YPTB3698 50S ribosomal protein L3chromosome CDS4396555 630 - 0.490476
rplD YPTB3697 50S ribosomal protein L4chromosome CDS4395933 594 - 0.50505
rplE YPTB3686 50S ribosomal protein L5chromosome CDS4391138 540 - 0.488889
rplF YPTB3683 50S ribosomal protein L6chromosome CDS4389845 534 - 0.513109
rplI YPTB0441 50S ribosomal protein L9chromosome CDS524433 453 + 0.494481
rplJ YPTB0281 50S ribosomal protein L10chromosome CDS334875 498 + 0.493976
rplK YPTB0279 50S ribosomal protein L11chromosome CDS333374 429 + 0.487179
rplL YPTB0282 50S ribosomal protein L7/L12chromosome CDS335439 369 + 0.468835
rplM YPTB3508 50S ribosomal protein L13chromosome CDS4177614 429 - 0.496504
rplN YPTB3688 50S ribosomal protein L14chromosome CDS4392017 372 - 0.502688
rplO YPTB3679 50S ribosomal protein L15chromosome CDS4388344 435 - 0.510345
rplP YPTB3691 50S ribosomal protein L16chromosome CDS4393014 411 - 0.508516
rplQ YPTB3672 50S ribosomal protein L17chromosome CDS4383849 390 - 0.54359
rplR YPTB3682 50S ribosomal protein L18chromosome CDS4389482 354 - 0.516949
rplS YPTB0837 50S ribosomal protein L19chromosome CDS1003986 348 + 0.477012
rplT YPTB2339 50S ribosomal protein L20chromosome CDS2761963 357 - 0.498599
rplU YPTB0464 50S ribosomal protein L21chromosome CDS549900 312 + 0.455128
rplV YPTB3693 50S ribosomal protein L22chromosome CDS4394153 333 - 0.501502
rplW YPTB3696 50S ribosomal protein L23chromosome CDS4395634 303 - 0.485149
rplX YPTB3687 50S ribosomal protein L24chromosome CDS4391692 315 - 0.460317
rplY YPTB1299 50S ribosomal protein L25chromosome CDS1546761 285 - 0.463158
rpmA YPTB0465 50S ribosomal protein L27chromosome CDS550231 258 + 0.488372
rpmB YPTB0047 50S ribosomal protein L28chromosome CDS60215 237 + 0.506329
rpmC YPTB3690 50S ribosomal protein L29chromosome CDS4392823 192 - 0.5
rpmD YPTB3680 50S ribosomal protein L30chromosome CDS4388782 180 - 0.433333
rpmE YPTB0102 50S ribosomal protein L31chromosome CDS115920 216 + 0.490741
rpmF YPTB2475 50S ribosomal protein L32chromosome CDS2919935 168 - 0.547619
rpmG YPTB0048 50S ribosomal protein L33chromosome CDS60463 168 + 0.392857
rpmH YPTB3945 50S ribosomal protein L34chromosome CDS4711363 141 + 0.510638
rpmI YPTB2340 50S ribosomal protein L35chromosome CDS2762357 198 - 0.459596
rpmJ YPTB3677 50S ribosomal protein L36chromosome CDS4386855 117 - 0.444444
rpsA YPTB1417 30S ribosomal protein S1chromosome CDS1695842 1674 + 0.479689
rpsB YPTB3003 30S ribosomal protein S2chromosome CDS3542052 726 - 0.477961
rpsC YPTB3692 30S ribosomal protein S3chromosome CDS4393437 699 - 0.493562
rpsD YPTB3674 30S ribosomal protein S4chromosome CDS4385294 621 - 0.478261
rpsE YPTB3681 30S ribosomal protein S5chromosome CDS4388964 504 - 0.486111
rpsF YPTB0438 30S ribosomal protein S6chromosome CDS523443 393 + 0.508906
rpsG YPTB3704 30S ribosomal protein S7chromosome CDS4402269 471 - 0.47983
rpsH YPTB3684 30S ribosomal protein S8chromosome CDS4390393 393 - 0.475827
rpsI YPTB3507 30S ribosomal protein S9chromosome CDS4177207 393 - 0.493639
rpsK YPTB3675 30S ribosomal protein S11chromosome CDS4385945 390 - 0.502564
rpsM YPTB3676 30S ribosomal protein S13chromosome CDS4386351 357 - 0.504202
rpsN YPTB3685 30S ribosomal protein S14chromosome CDS4390819 306 - 0.51634
rpsP YPTB0834 30S ribosomal protein S16chromosome CDS1002308 249 + 0.502008
rpsQ YPTB3689 30S ribosomal protein S17chromosome CDS4392569 255 - 0.466667
rpsR YPTB0440 30S ribosomal protein S18chromosome CDS524166 228 + 0.473684
rpsS YPTB3694 30S ribosomal protein S19chromosome CDS4394500 279 - 0.505376
rpsT YPTB0615 30S ribosomal protein S20chromosome CDS730397 264 - 0.465909
rpsU YPTB3416 30S ribosomal protein S21chromosome CDS4057757 216 + 0.462963
rpsl YPTB3705 30S ribosomal protein S12chromosome CDS4402836 375 - 0.506667
rsmC YPTB0572 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS674877 1044 - 0.519157
rspO YPTB0483 30S ribosomal protein S15chromosome CDS569561 270 + 0.485185
rsuA YPTB1301 ribosomal small subunit pseudouridine synthase Achromosome CDS1549498 708 + 0.519774
selB YPTB3932 selenocysteine-specific elongation factor EFchromosome CDS4695312 1974 + 0.555218
serS YPTB1404 seryl-tRNA synthetasechromosome CDS1676219 1293 + 0.491106
speG YPTB2797 spermidine acetyltransferasechromosome CDS3300347 546 + 0.39011
srmB YPTB2900 ATP-dependent RNA helicasechromosome CDS3431229 1326 + 0.505279
tgt YPTB0928 queuine tRNA-ribosyltransferasechromosome CDS1121744 1125 + 0.489778
thrS YPTB2342 threonyl-tRNA synthetasechromosome CDS2763206 1929 - 0.472784
trmA YPTB0124 tRNA (uracil-5-)-methyltransferasechromosome CDS146084 1104 - 0.478261
trmD YPTB0836 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS1003165 741 + 0.522267
trmH YPTB0034 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS47023 693 - 0.496392
trmU YPTB2430 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS2872937 1116 + 0.502688
trpS YPTB3744 tryptophanyl-tRNA synthetasechromosome CDS4444434 1041 - 0.48415
truA YPTB2618 tRNA pseudouridine synthase Achromosome CDS3093823 900 - 0.505556
truB YPTB0482 tRNA pseudouridine synthase Bchromosome CDS568465 975 + 0.495385
tsf YPTB3002 elongation factor Tschromosome CDS3541066 858 - 0.480186
tuf YPTB0276 elongation factor Tuchromosome CDS330818 1185 + 0.480169
tuf YPTB3702 elongation factor Tuchromosome CDS4398811 1185 - 0.4827
tyrS YPTB2283 tyrosyl-tRNA synthetasechromosome CDS2694165 1275 - 0.487843
valS YPTB0529 valyl-tRNA synthetasechromosome CDS619419 2898 - 0.521739
yadB YPTB0733 glutamyl-tRNA synthetasechromosome CDS879166 996 - 0.50502
ychF YPTB1998 hypothetical proteinchromosome CDS2354015 1092 - 0.496337
yfiA YPTB0844 putative sigma 54 modulation proteinchromosome CDS1012239 363 - 0.446281
yfiF YPTB0854 putative tRNA/rRNA methyltransferasechromosome CDS1030634 1173 + 0.531969
yhbH YPTB3527 putative sigma N modulation factorchromosome CDS4194930 288 + 0.378472
yjcK YPTB1890 putative similar to ribosomal-protein-alanine N-acetyltransfe...chromosome CDS2231868 558 + 0.390681
ykgM YPTB0982 50S ribosomal protein L31chromosome CDS1178406 261 - 0.471264
ymfC YPTB2428 putative pseudouridine synthasechromosome CDS2871685 627 + 0.494418