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2024-06-18 02:24:59

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 124

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis Nepal516, Nepal516
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPN_3959 membrane proteinchromosome CDS4502043 1641 + 0.481414
NA YPN_2304 flagellar biosynthetic protein FliQchromosome CDS2585307 270 + 0.522222
NA YPN_0547 type II secretion proteinchromosome CDS660869 1287 - 0.425796
NA YPN_3206 hypothetical proteinchromosome CDS3625298 1659 - 0.46956
NA YPN_3204 Outer membrane autotransporter barrelchromosome CDS3618767 3771 - 0.531159
NA YPN_2327 negative regulator of flagellin synthesischromosome CDS2608685 303 + 0.475248
NA YPN_0456 autotransporter proteinchromosome CDS550156 2985 - 0.448241
NA YPN_3839 preprotein translocase SecY subunitchromosome CDS4388075 1332 - 0.459459
NA YPN_2283 flagellar protein FliSchromosome CDS2567001 399 + 0.466165
NA YPN_0606 outer membrane efflux lipoproteinchromosome CDS718880 1407 + 0.510306
NA YPN_3654 hypothetical proteinchromosome CDS4191472 1392 - 0.383621
NA YPN_0186 Sec-independent protein translocase protein TatAchromosome CDS232707 267 + 0.438202
NA YPN_3365 outer membrane fimbrial usher proteinchromosome CDS3840572 2379 - 0.461959
NA YPN_0897 membrane proteinchromosome CDS1050408 336 + 0.440476
NA YPN_3826 hypothetical proteinchromosome CDS4377542 1122 - 0.486631
NA YPN_1934 outer membrane usher proteinchromosome CDS2183013 2448 + 0.461193
NA YPN_0019 hemolysinchromosome CDS29643 4908 - 0.445803
NA YPN_0572 flagellar M-ring proteinchromosome CDS683957 1641 + 0.502133
NA YPN_3653 hemolysin activator proteinchromosome CDS4189600 1764 - 0.459184
NA YPN_3397 type III secretion apparatus proteinchromosome CDS3873600 711 - 0.451477
NA YPN_0898 protein-export membrane protein SecDchromosome CDS1050771 1848 + 0.488095
NA YPN_0846 adhesin system componentchromosome CDS984967 1161 + 0.507321
NA YPN_0556 fimbrial chaperone proteinchromosome CDS669755 720 + 0.488889
NA YPN_0568 flagellar switch proteinchromosome CDS680694 414 - 0.444444
NA YPN_0845 surface-exposed proteinchromosome CDS983136 1791 + 0.455053
NA YPN_2297 flagellar protein FliJchromosome CDS2579892 447 + 0.478747
NA YPN_0083 chaperone proteinchromosome CDS115012 819 - 0.482295
NA YPN_1441 fimbrial proteinchromosome CDS1641258 609 + 0.425287
NA YPN_2081 hypothetical proteinchromosome CDS2348272 2034 - 0.517207
NA YPN_1257 fimbrial biogenesis proteinchromosome CDS1432099 750 + 0.492
NA YPN_2328 flagella synthesis protein FlgNchromosome CDS2609006 441 + 0.487528
NA YPN_1923 fimbrial proteinchromosome CDS2169843 543 - 0.425414
NA YPN_1933 chaperone proteinchromosome CDS2182073 753 + 0.446215
NA YPN_3360 hypothetical proteinchromosome CDS3829761 3810 + 0.531759
NA YPN_0551 hypothetical proteinchromosome CDS664055 855 - 0.357895
NA YPN_1917 oligogalacturonate lyasechromosome CDS2161343 1167 - 0.459297
NA YPN_1045 putative autotransporter proteinchromosome CDS1204062 1917 - 0.47157
NA YPN_2187 mannose-resistant/Proteus-like fimbrial proteinchromosome CDS2471947 531 - 0.463277
NA YPN_3018 general protein secretion proteinchromosome CDS3388850 1047 - 0.344795
NA YPN_2986 prepilin peptidase dependent proteinchromosome CDS3355912 609 - 0.486043
NA YPN_3243 protein-export membrane proteinchromosome CDS3702235 336 - 0.482143
NA YPN_2987 hypothetical proteinchromosome CDS3356511 570 - 0.461404
NA YPN_2333 flagellar biosynthesis protein FlhAchromosome CDS2614336 2079 - 0.518037
NA YPN_2877 TolQ colicin import proteinchromosome CDS3235525 687 - 0.487627
NA YPN_2303 flagellar biosynthetic protein FliPchromosome CDS2584377 825 + 0.513939
NA YPN_0087 fimbrial proteinchromosome CDS120630 531 - 0.436911
NA YPN_3016 general secretion pathway protein Hchromosome CDS3387846 591 - 0.338409
NA YPN_0575 flagellum-specific ATP synthasechromosome CDS687326 1341 + 0.580164
NA YPN_3010 prepilin peptidasechromosome CDS3383410 843 - 0.358244
NA YPN_1922 chaperone proteinchromosome CDS2168911 780 - 0.441026
NA YPN_2874 TolB colicin import proteinchromosome CDS3232394 1293 - 0.4942
NA YPN_2334 flagellar biosynthetic protein FlhBchromosome CDS2616414 1161 - 0.525409
NA YPN_1891 multiple antibiotic resistance proteinchromosome CDS2135517 684 + 0.438596
NA YPN_0187 Sec-independent protein translocase protein TatBchromosome CDS232977 663 + 0.505279
NA YPN_3020 general secretion pathway protein Dchromosome CDS3391546 1923 - 0.333333
NA YPN_0544 hypothetical proteinchromosome CDS658413 771 - 0.35668
NA YPN_3364 fimbrial chaperonechromosome CDS3839757 744 - 0.435484
NA YPN_3915 membrane transport proteinchromosome CDS4453202 1125 - 0.481778
NA YPN_0555 outer membrane usher proteinchromosome CDS667257 2481 + 0.503023
NA YPN_1920 fimbrial proteinchromosome CDS2165057 1164 - 0.46134
NA YPN_3689 outer membrane fimbrial usher porinchromosome CDS4234330 636 - 0.490566
NA YPN_2876 TolR colicin import membrane proteinchromosome CDS3235084 429 - 0.468531
NA YPN_1005 membrane proteinchromosome CDS1164184 450 - 0.502222
NA YPN_1647 membrane proteinchromosome CDS1864710 645 + 0.452713
NA YPN_2675 chaperone protein PsaB precursorchromosome CDS3019547 822 - 0.377129
NA YPN_1919 chaperone proteinchromosome CDS2164257 804 - 0.482587
NA YPN_0933 ATP-dependent Clp protease proteolytic subunit ClpPchromosome CDS1084398 624 + 0.461538
NA YPN_0188 Sec-independent protein translocase protein TatCchromosome CDS233642 777 + 0.449163
NA YPN_1628 protease IVchromosome CDS1839791 1851 - 0.480281
NA YPN_0466 hemolysin activator proteinchromosome CDS565178 1689 + 0.541741
NA YPN_0541 membrane proteinchromosome CDS655805 1557 - 0.353886
NA YPN_1205 signal peptidase Ichromosome CDS1370052 999 + 0.49049
NA YPN_1435 frimbrial proteinchromosome CDS1635688 546 + 0.443223
NA YPN_3395 type III secretion apparatus proteinchromosome CDS3872514 795 - 0.515723
NA YPN_0545 hypothetical proteinchromosome CDS659167 834 - 0.302158
NA YPN_1958 hypothetical proteinchromosome CDS2212163 3807 - 0.531127
NA YPN_2301 flagellar motor switch protein FliNchromosome CDS2583428 417 + 0.494005
NA YPN_0557 Fimbrial proteinchromosome CDS670499 1107 + 0.487805
NA YPN_3013 general secretion pathway protein Kchromosome CDS3385910 957 - 0.314525
NA YPN_0086 fimbrial chaperonechromosome CDS119835 732 - 0.422131
NA YPN_0663 prepilin peptidase dependent protein D precursorchromosome CDS777492 465 - 0.445161
NA YPN_2137 hypothetical proteinchromosome CDS2415465 1191 - 0.356843
NA YPN_3017 general secretion pathway protein Gchromosome CDS3388393 438 - 0.394977
NA YPN_0550 outer membrane secretin family proteinchromosome CDS663591 450 - 0.433333
NA YPN_3228 autotransporter proteinchromosome CDS3671685 11118 - 0.529232
NA YPN_0567 flagellar assembly proteinchromosome CDS679927 771 - 0.514916
NA YPN_1436 pili chaperone proteinchromosome CDS1636390 762 + 0.412073
NA YPN_3406 type III secretion system apparatus lipoproteinchromosome CDS3880872 732 - 0.490437
NA YPN_2293 flagellar M-ring proteinchromosome CDS2574965 1713 + 0.532983
NA YPN_0430 preprotein translocase SecAchromosome CDS526660 2715 + 0.48582
NA YPN_1521 hemolysin activator proteinchromosome CDS1725065 1662 + 0.367629
NA YPN_0566 flagellar assembly proteinchromosome CDS679653 273 - 0.450549
NA YPN_2085 hemolysin activator proteinchromosome CDS2359727 1689 - 0.53878
NA YPN_3398 type III secretion system apparatus proteinchromosome CDS3874377 963 - 0.54621
NA YPN_0553 membrane proteinchromosome CDS665824 423 - 0.385343
NA YPN_3776 hypothetical proteinchromosome CDS4328827 489 - 0.466258
NA YPN_3634 autotransporter proteinchromosome CDS4161053 3213 - 0.490819
NA YPN_0348 lipoprotein signal peptidasechromosome CDS426754 510 + 0.454902
NA YPN_0085 outer membrane usher proteinchromosome CDS117180 2628 - 0.471081
NA YPN_3396 type III secretion apparatus proteinchromosome CDS3873310 294 - 0.47619
NA YPN_0564 flagellar assembly proteinchromosome CDS677740 1134 - 0.446208
NA YPN_0801 signal recognition particle proteinchromosome CDS933914 1362 + 0.483847
NA YPN_3598 membrane proteinchromosome CDS4124074 594 + 0.46633
NA YPN_3688 fimbrial chaperonechromosome CDS4233470 768 - 0.427083
NA YPN_3690 hypothetical proteinchromosome CDS4234991 1830 - 0.448087
NA YPN_2674 outer membrane usher protein PsaC precursorchromosome CDS3016992 2472 - 0.497168
NA YPN_2305 flagellar biosynthetic protein FliRchromosome CDS2585579 783 + 0.496807
NA YPN_0571 flagellar hook-basal body complex proteinchromosome CDS683567 381 + 0.514436
NA YPN_0469 autotransporter proteinchromosome CDS573259 2286 - 0.547244
NA YPN_0899 protein-export membrane protein SecFchromosome CDS1052629 969 + 0.474716
NA YPN_3012 general secretion pathway protein Lchromosome CDS3384736 1191 - 0.319899
NA YPN_2210 heme exporter protein Dchromosome CDS2496709 303 - 0.518152
NA YPN_0141 lipoproteinchromosome CDS184231 528 - 0.477273
NA YPN_0546 membrane proteinchromosome CDS659997 876 - 0.332192
NA YPN_3783 protein-export proteinchromosome CDS4335579 477 - 0.484277
NA YPN_1082 sec-independent protein translocase proteinchromosome CDS1244679 258 + 0.465116
NA YPN_3394 type III secretion apparatus proteinchromosome CDS3871457 1068 - 0.4897
NA YPN_2292 flagellar hook-basal body complex protein FliEchromosome CDS2574301 312 - 0.496795
NA YPN_3015 general secretion pathway protein Ichromosome CDS3387464 345 - 0.342029
NA YPN_2590 hypothetical proteinchromosome CDS2917479 1095 - 0.405479
NA YPN_0480 membrane proteinchromosome CDS589936 1527 - 0.521938
NA YPN_0565 flagellar assembly proteinchromosome CDS678873 774 - 0.47416
NA YPN_0213 preprotein translocase SecE subunitchromosome CDS264161 384 + 0.486979
NA YPN_3691 fimbrial proteinchromosome CDS4236896 558 - 0.460573