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2024-06-16 13:31:57

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO0269 type III secretion proteinchromosome CDS269617 921 + 0.543974
NA YPO1015 putative prepilin peptidase dependent proteinchromosome CDS1148051 609 + 0.486043
NA YPO0273 putative type III secretion apparatus proteinchromosome CDS272390 1068 + 0.4897
NA YPO0689 hypothetical proteinchromosome CDS750459 876 - 0.332192
NA YPO3879 putative outer membrane usher proteinchromosome CDS4353903 2628 + 0.471081
NA YPO0808 general secretion pathway protein Lchromosome CDS886874 1170 - 0.317949
NA YPO0243 hypothetical proteinchromosome CDS241590 1122 + 0.486631
NA YPO1920 probable fimbrial usher proteinchromosome CDS2173767 2592 - 0.494985
NA YPO0940 hypothetical proteinchromosome CDS1031548 1077 - 0.481894
NA YPO0811 general secretion pathway protein Ichromosome CDS889602 345 - 0.342029
NA YPO2045 putative hemolysinchromosome CDS2318132 4731 + 0.412598
NA YPO0806 prepilin peptidasechromosome CDS885548 843 - 0.358244
NA YPO2940 fimbrial proteinchromosome CDS3282765 555 - 0.430631
NA YPO0813 general secretion pathway protein Gchromosome CDS890531 438 - 0.394977
NA YPO0303 putative fimbrial chaperonechromosome CDS305125 744 + 0.435484
NA YPO1388 hypothetical proteinchromosome CDS1566262 1869 + 0.387373
NA YPO2181 hypothetical proteinchromosome CDS2456087 645 + 0.452713
NA YPO0257 possible type III secretion proteinchromosome CDS258675 1572 + 0.43257
NA YPO3944 putative invasinchromosome CDS4434982 9042 - 0.511944
NA YPO2759 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS3092975 531 + 0.463277
NA YPO0809 general secretion pathway protein Kchromosome CDS888048 957 - 0.314525
NA YPO0272 putative type III secretion apparatus proteinchromosome CDS271606 795 + 0.515723
NA YPO3950 hypothetical proteinchromosome CDS4448588 585 + 0.466667
NA YPO3881 putative chaperone proteinchromosome CDS4357952 747 + 0.481928
NA YPO1921 probable pili assembly chaperonechromosome CDS2176407 645 - 0.424806
NA YPO2881 putative fimbrial biogenesis proteinchromosome CDS3217115 750 - 0.492
NA YPO0309 hypothetical proteinchromosome CDS312055 3717 - 0.531612
NA YPO1711 putative chaperone proteinchromosome CDS1953688 804 + 0.482587
NA YPO0599 putative adhesinchromosome CDS649319 9888 + 0.57231
NA YPO4102 inner membrane protein translocase component YidCchromosome CDS4621181 1641 + 0.481414
NA YPO2542 hypothetical proteinchromosome CDS2853651 1191 - 0.356843
NA YPO0266 secretion system apparatus proteinchromosome CDS265448 2049 + 0.520254
NA YPO4044 fimbrial proteinchromosome CDS4561310 558 - 0.460573
NA YPO0816 general secretion pathway protein Dchromosome CDS893684 1923 - 0.332813
NA YPO2482 hypothetical proteinchromosome CDS2784744 453 - 0.470199
NA YPO0682 MotA/TolQ/ExbB proton channel family proteinchromosome CDS745023 714 + 0.515406
NA YPO0812 general secretion pathway protein Hchromosome CDS889984 543 - 0.3407
NA YPO0617 hypothetical proteinchromosome CDS678402 1527 - 0.521938
NA YPO0815 general secretion pathway protein Echromosome CDS892176 1512 - 0.39418
NA YPO2490 putative hemolysinchromosome CDS2790123 7608 - 0.573344
NA YPO2945 frimbrial proteinchromosome CDS3288399 546 - 0.443223
NA YPO0267 flagellum-specific ATP synthasechromosome CDS267483 1338 + 0.575486
NA YPO2491 putative hemolysin activator proteinchromosome CDS2797874 1689 - 0.53878
NA YPO1922 fimbrial proteinchromosome CDS2177144 531 - 0.485876
NA YPO0684 hypothetical proteinchromosome CDS746268 1557 - 0.353886
NA YPO3028 putative autotransporterchromosome CDS3381105 2280 + 0.442544
NA YPO3084 hypothetical proteinchromosome CDS3440306 450 + 0.502222
NA YPO0271 putative type III secretion apparatus proteinchromosome CDS271311 294 + 0.47619
NA YPO1696 probable outer membrane usher proteinchromosome CDS1933288 2448 - 0.461193
NA YPO1387 hypothetical proteinchromosome CDS1565168 1095 + 0.405479
NA YPO1918 probable pili assembly chaperonechromosome CDS2171665 741 - 0.442645
NA YPO0270 putative type III secretion apparatus proteinchromosome CDS270664 651 + 0.463902
NA YPO1672 hypothetical proteinchromosome CDS1902800 3807 + 0.530864
NA YPO0695 hypothetical proteinchromosome CDS756287 423 - 0.385343
NA YPO1709 putative outer membrane usher proteinchromosome CDS1949919 2613 + 0.493685
NA YPO1697 putative chaperone proteinchromosome CDS1935923 753 - 0.446215
NA YPO3878 putative fimbrial chaperonechromosome CDS4353144 732 + 0.422131
NA YPO4005 putative hemolysin activator proteinchromosome CDS4514110 1764 - 0.459184
NA YPO3877 putative fimbrial proteinchromosome CDS4352550 531 + 0.436911
NA YPO0698 outer membrane usher proteinchromosome CDS758430 2481 + 0.503426
NA YPO0691 hypothetical proteinchromosome CDS752629 1233 - 0.334955
NA YPO2280 putative phage-related secreted proteinchromosome CDS2560790 1245 + 0.452209
NA YPO0699 fimbrial chaperone proteinchromosome CDS760928 720 + 0.488889
NA YPO3823 putative lipoproteinchromosome CDS4288961 528 + 0.477273
NA YPO1707 putative fimbrial proteinchromosome CDS1948363 543 + 0.425414
NA YPO2044 putative hemolysin activator proteinchromosome CDS2316429 1674 + 0.367981
NA YPO0587 putative autotransporter proteinchromosome CDS632564 2985 - 0.448241
NA YPO0700 Fimbrial proteinchromosome CDS761672 1107 + 0.487805
NA YPO0687 hypothetical proteinchromosome CDS748875 735 - 0.365986
NA YPO4041 putative fimbrial chaperonechromosome CDS4557884 768 - 0.427083
NA YPO0810 general secretion pathway protein Jchromosome CDS889013 597 - 0.311558
NA YPO1708 putative chaperone proteinchromosome CDS1949058 780 + 0.441026
NA YPO0146 hypothetical proteinchromosome CDS161063 942 + 0.514862
NA YPO0683 ExbD/TolR-family transport proteinchromosome CDS745740 432 + 0.483796
NA YPO0688 hypothetical proteinchromosome CDS749629 834 - 0.302158
NA YPO4006 hypothetical proteinchromosome CDS4515982 1392 - 0.383621
NA YPO0598 putative hemolysin activator proteinchromosome CDS647586 1689 + 0.541741
NA YPO1710 putative fimbrial proteinchromosome CDS1952528 1164 + 0.46134
NA YPO0690 putative type II secretion proteinchromosome CDS751331 1287 - 0.425796
NA YPO3721 hemolysinchromosome CDS4158112 4908 + 0.445803
NA YPO2944 putative pili chaperone proteinchromosome CDS3287481 780 - 0.411538
NA YPO0263 type III secretion system apparatus lipoproteinchromosome CDS263312 732 + 0.490437
NA YPO2486 hypothetical proteinchromosome CDS2786419 2034 - 0.517207
NA YPO0902 putative surface protein (partial)chromosome CDS987287 1977 - 0.540718
NA YPO0150 putative membrane transport proteinchromosome CDS164004 1125 + 0.481778
NA YPO0302 putative outer membrane fimbrial usher proteinchromosome CDS302675 2379 + 0.461959
ccmD YPO2737 putative heme exporter protein Dchromosome CDS3068520 303 + 0.518152
clpP YPO3157 ATP-dependent Clp protease proteolytic subunitchromosome CDS3520559 624 - 0.461538
cpxP YPO0075 hypothetical proteinchromosome CDS84482 489 + 0.466258
ffh YPO3296 signal recognition particle proteinchromosome CDS3674224 1362 - 0.483847
flgM YPO1797 negative regulator of flagellin synthesischromosome CDS2042999 303 - 0.475248
flgN YPO1796 flagella synthesis protein FlgNchromosome CDS2042540 441 - 0.487528
flhA YPO1791 flagellar biosynthesis proteinchromosome CDS2035572 2079 + 0.518037
flhB YPO0706 flagellar biosynthesis proteinchromosome CDS768877 1134 - 0.446208
flhB YPO1790 flagellar biosynthesis proteinchromosome CDS2034412 1161 + 0.525409
fliE YPO0713 putative flagellar hook-basal body complex proteinchromosome CDS774704 381 + 0.514436
fliE YPO1831 flagellar basal body proteinchromosome CDS2077374 312 + 0.496795
fliF YPO0714 flagellar M-ring proteinchromosome CDS775094 1641 + 0.502133
fliF YPO1830 flagellar M-ring proteinchromosome CDS2075309 1713 - 0.532983
fliH YPO1828 flagellar assembly proteinchromosome CDS2073611 717 - 0.548117
fliH YPO0716 flagellar assembly proteinchromosome CDS777751 720 + 0.538889
fliI YPO1827 flagellum-specific ATP synthasechromosome CDS2072194 1455 - 0.547079
fliI YPO0717 flagellum-specific ATP synthasechromosome CDS778463 1341 + 0.580164
fliJ YPO1826 flagellar proteinchromosome CDS2071648 447 - 0.478747
fliN YPO0710 flagellar switch proteinchromosome CDS771831 414 - 0.444444
fliN YPO1822 flagellar motor switch proteinchromosome CDS2068142 417 - 0.494005
fliP YPO1820 flagellar biosynthesis proteinchromosome CDS2066785 741 - 0.51417
fliP YPO0709 putative flagellar assembly proteinchromosome CDS771064 771 - 0.514916
fliQ YPO1820a flagellar biosynthesis proteinchromosome CDS2066410 270 - 0.522222
fliQ YPO0708 putative flagellar assembly proteinchromosome CDS770790 270 - 0.451852
fliR YPO0707 putative flagellar assembly proteinchromosome CDS770010 774 - 0.47416
fliR YPO1819 flagellar biosynthesis proteinchromosome CDS2065625 783 - 0.496807
fliS YPO0741 putative flagellar proteinchromosome CDS801304 381 + 0.388451
fliS YPO1840 flagellar protein FliSchromosome CDS2084555 399 - 0.466165
ftsY YPO3814 cell division proteinchromosome CDS4279876 1626 - 0.483395
hmwA YPO3247 putative adhesinchromosome CDS3614872 5733 - 0.457527
hofB YPO3426 putative type II secretion system proteinchromosome CDS3829978 1539 + 0.460689
hofC YPO3427 putative type II secretion system proteinchromosome CDS3831513 1200 + 0.455
hxuB YPO3248 putative surface-exposed proteinchromosome CDS3620645 1791 - 0.455053
ibeB YPO3481 probable outer membrane efflux lipoproteinchromosome CDS3886836 1407 - 0.509595
lepB YPO2717 signal peptidase Ichromosome CDS3045221 999 + 0.49049
lspA YPO0476 signal peptidase IIchromosome CDS507551 510 + 0.454902
marC YPO2437 multiple antibiotic resistance proteinchromosome CDS2737063 684 + 0.438596
ogl YPO1713 oligogalacturonate lyasechromosome CDS1956239 1167 + 0.459297
ppdD YPO3425 putative prepilin peptidase dependent protein D precursorchromosome CDS3829521 465 + 0.447312
psaB YPO1304 chaperone protein PsaB precursorchromosome CDS1463379 822 + 0.377129
psaC YPO1305 outer membrane usher protein PsaC precursorchromosome CDS1464242 2514 + 0.492045
secA YPO0564 translocasechromosome CDS609376 2715 + 0.48582
secB YPO0067 export protein SecBchromosome CDS77742 477 + 0.484277
secD YPO3189 protein export protein SecDchromosome CDS3550292 1848 - 0.487554
secE YPO3753 translocasechromosome CDS4209155 384 - 0.486979
secF YPO3188 protein export protein SecFchromosome CDS3549313 969 - 0.474716
secG YPO3499 protein-export membrane proteinchromosome CDS3909318 336 - 0.482143
secY YPO0229 preprotein translocase SecYchromosome CDS230847 1332 + 0.459459
shlB YPO3720 hemolysin activator proteinchromosome CDS4156357 1686 + 0.469158
sohB YPO2216 peptidase family U7 proteinchromosome CDS2489189 1047 + 0.483286
sppA YPO2162 protease IVchromosome CDS2431177 1851 - 0.480281
tatA YPO3778 Sec-independent protein translocase protein TatAchromosome CDS4240724 267 - 0.438202
tatB YPO3777 Sec-independent protein translocase protein TatBchromosome CDS4240058 663 - 0.505279
tatC YPO3776 Sec-independent protein translocase protein TatCchromosome CDS4239279 777 - 0.449163
tatE YPO2597 twin argininte translocase protein Achromosome CDS2918636 258 + 0.465116
tolB YPO1124 translocation protein TolB precursorchromosome CDS1270189 1293 + 0.4942
tolC YPO0663 outer membrane channel precursor proteinchromosome CDS722560 1404 - 0.47151
tolQ YPO1121 TolQ colicin import proteinchromosome CDS1267664 687 + 0.487627
tolR YPO1122 TolR colicin import membrane proteinchromosome CDS1268363 429 + 0.468531
yajC YPO3190 preprotein translocase subunit YajCchromosome CDS3552167 336 - 0.440476
yapC YPO2796 putaive autotransporter proteinchromosome CDS3125064 1917 + 0.47157
yapE YPO3984 putative autotransporter proteinchromosome CDS4485558 3213 - 0.490819
yapF YPO0606 putative autotransporter proteinchromosome CDS661725 2286 - 0.547244
yapH YPO1004 putative autotransporter proteinchromosome CDS1119829 11118 + 0.529232