Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Genomic element: chromosome
Number of genes found: 150
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis CO92, CO92 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPO0273 | putative type III secretion apparatus protein | chromosome | CDS | 272390 | 1068 | + | 0.4897 |
NA | YPO0271 | putative type III secretion apparatus protein | chromosome | CDS | 271311 | 294 | + | 0.47619 |
NA | YPO4044 | fimbrial protein | chromosome | CDS | 4561310 | 558 | - | 0.460573 |
NA | YPO0270 | putative type III secretion apparatus protein | chromosome | CDS | 270664 | 651 | + | 0.463902 |
NA | YPO0690 | putative type II secretion protein | chromosome | CDS | 751331 | 1287 | - | 0.425796 |
NA | YPO0689 | hypothetical protein | chromosome | CDS | 750459 | 876 | - | 0.332192 |
NA | YPO4041 | putative fimbrial chaperone | chromosome | CDS | 4557884 | 768 | - | 0.427083 |
NA | YPO0309 | hypothetical protein | chromosome | CDS | 312055 | 3717 | - | 0.531612 |
NA | YPO0809 | general secretion pathway protein K | chromosome | CDS | 888048 | 957 | - | 0.314525 |
NA | YPO3028 | putative autotransporter | chromosome | CDS | 3381105 | 2280 | + | 0.442544 |
NA | YPO1015 | putative prepilin peptidase dependent protein | chromosome | CDS | 1148051 | 609 | + | 0.486043 |
NA | YPO2542 | hypothetical protein | chromosome | CDS | 2853651 | 1191 | - | 0.356843 |
NA | YPO0812 | general secretion pathway protein H | chromosome | CDS | 889984 | 543 | - | 0.3407 |
NA | YPO1922 | fimbrial protein | chromosome | CDS | 2177144 | 531 | - | 0.485876 |
NA | YPO0617 | hypothetical protein | chromosome | CDS | 678402 | 1527 | - | 0.521938 |
NA | YPO1708 | putative chaperone protein | chromosome | CDS | 1949058 | 780 | + | 0.441026 |
NA | YPO3878 | putative fimbrial chaperone | chromosome | CDS | 4353144 | 732 | + | 0.422131 |
NA | YPO3084 | hypothetical protein | chromosome | CDS | 3440306 | 450 | + | 0.502222 |
NA | YPO0243 | hypothetical protein | chromosome | CDS | 241590 | 1122 | + | 0.486631 |
NA | YPO0700 | Fimbrial protein | chromosome | CDS | 761672 | 1107 | + | 0.487805 |
NA | YPO0263 | type III secretion system apparatus lipoprotein | chromosome | CDS | 263312 | 732 | + | 0.490437 |
NA | YPO0684 | hypothetical protein | chromosome | CDS | 746268 | 1557 | - | 0.353886 |
NA | YPO0816 | general secretion pathway protein D | chromosome | CDS | 893684 | 1923 | - | 0.332813 |
NA | YPO1710 | putative fimbrial protein | chromosome | CDS | 1952528 | 1164 | + | 0.46134 |
NA | YPO0691 | hypothetical protein | chromosome | CDS | 752629 | 1233 | - | 0.334955 |
NA | YPO1387 | hypothetical protein | chromosome | CDS | 1565168 | 1095 | + | 0.405479 |
NA | YPO0698 | outer membrane usher protein | chromosome | CDS | 758430 | 2481 | + | 0.503426 |
NA | YPO0598 | putative hemolysin activator protein | chromosome | CDS | 647586 | 1689 | + | 0.541741 |
NA | YPO0688 | hypothetical protein | chromosome | CDS | 749629 | 834 | - | 0.302158 |
NA | YPO2945 | frimbrial protein | chromosome | CDS | 3288399 | 546 | - | 0.443223 |
NA | YPO3823 | putative lipoprotein | chromosome | CDS | 4288961 | 528 | + | 0.477273 |
NA | YPO0687 | hypothetical protein | chromosome | CDS | 748875 | 735 | - | 0.365986 |
NA | YPO3881 | putative chaperone protein | chromosome | CDS | 4357952 | 747 | + | 0.481928 |
NA | YPO0267 | flagellum-specific ATP synthase | chromosome | CDS | 267483 | 1338 | + | 0.575486 |
NA | YPO0902 | putative surface protein (partial) | chromosome | CDS | 987287 | 1977 | - | 0.540718 |
NA | YPO1672 | hypothetical protein | chromosome | CDS | 1902800 | 3807 | + | 0.530864 |
NA | YPO0269 | type III secretion protein | chromosome | CDS | 269617 | 921 | + | 0.543974 |
NA | YPO0599 | putative adhesin | chromosome | CDS | 649319 | 9888 | + | 0.57231 |
NA | YPO4006 | hypothetical protein | chromosome | CDS | 4515982 | 1392 | - | 0.383621 |
NA | YPO2881 | putative fimbrial biogenesis protein | chromosome | CDS | 3217115 | 750 | - | 0.492 |
NA | YPO0695 | hypothetical protein | chromosome | CDS | 756287 | 423 | - | 0.385343 |
NA | YPO0303 | putative fimbrial chaperone | chromosome | CDS | 305125 | 744 | + | 0.435484 |
NA | YPO2482 | hypothetical protein | chromosome | CDS | 2784744 | 453 | - | 0.470199 |
NA | YPO2944 | putative pili chaperone protein | chromosome | CDS | 3287481 | 780 | - | 0.411538 |
NA | YPO3721 | hemolysin | chromosome | CDS | 4158112 | 4908 | + | 0.445803 |
NA | YPO3944 | putative invasin | chromosome | CDS | 4434982 | 9042 | - | 0.511944 |
NA | YPO3877 | putative fimbrial protein | chromosome | CDS | 4352550 | 531 | + | 0.436911 |
NA | YPO0272 | putative type III secretion apparatus protein | chromosome | CDS | 271606 | 795 | + | 0.515723 |
NA | YPO0813 | general secretion pathway protein G | chromosome | CDS | 890531 | 438 | - | 0.394977 |
NA | YPO2759 | putative mannose-resistant/Proteus-like fimbrial protein | chromosome | CDS | 3092975 | 531 | + | 0.463277 |
NA | YPO0257 | possible type III secretion protein | chromosome | CDS | 258675 | 1572 | + | 0.43257 |
NA | YPO1696 | probable outer membrane usher protein | chromosome | CDS | 1933288 | 2448 | - | 0.461193 |
NA | YPO2045 | putative hemolysin | chromosome | CDS | 2318132 | 4731 | + | 0.412598 |
NA | YPO0683 | ExbD/TolR-family transport protein | chromosome | CDS | 745740 | 432 | + | 0.483796 |
NA | YPO2486 | hypothetical protein | chromosome | CDS | 2786419 | 2034 | - | 0.517207 |
NA | YPO1921 | probable pili assembly chaperone | chromosome | CDS | 2176407 | 645 | - | 0.424806 |
NA | YPO2490 | putative hemolysin | chromosome | CDS | 2790123 | 7608 | - | 0.573344 |
NA | YPO0940 | hypothetical protein | chromosome | CDS | 1031548 | 1077 | - | 0.481894 |
NA | YPO0810 | general secretion pathway protein J | chromosome | CDS | 889013 | 597 | - | 0.311558 |
NA | YPO0808 | general secretion pathway protein L | chromosome | CDS | 886874 | 1170 | - | 0.317949 |
NA | YPO0150 | putative membrane transport protein | chromosome | CDS | 164004 | 1125 | + | 0.481778 |
NA | YPO0302 | putative outer membrane fimbrial usher protein | chromosome | CDS | 302675 | 2379 | + | 0.461959 |
NA | YPO4102 | inner membrane protein translocase component YidC | chromosome | CDS | 4621181 | 1641 | + | 0.481414 |
NA | YPO2181 | hypothetical protein | chromosome | CDS | 2456087 | 645 | + | 0.452713 |
NA | YPO1709 | putative outer membrane usher protein | chromosome | CDS | 1949919 | 2613 | + | 0.493685 |
NA | YPO0587 | putative autotransporter protein | chromosome | CDS | 632564 | 2985 | - | 0.448241 |
NA | YPO1711 | putative chaperone protein | chromosome | CDS | 1953688 | 804 | + | 0.482587 |
NA | YPO2940 | fimbrial protein | chromosome | CDS | 3282765 | 555 | - | 0.430631 |
NA | YPO0146 | hypothetical protein | chromosome | CDS | 161063 | 942 | + | 0.514862 |
NA | YPO1707 | putative fimbrial protein | chromosome | CDS | 1948363 | 543 | + | 0.425414 |
NA | YPO4005 | putative hemolysin activator protein | chromosome | CDS | 4514110 | 1764 | - | 0.459184 |
NA | YPO2491 | putative hemolysin activator protein | chromosome | CDS | 2797874 | 1689 | - | 0.53878 |
NA | YPO0699 | fimbrial chaperone protein | chromosome | CDS | 760928 | 720 | + | 0.488889 |
NA | YPO1388 | hypothetical protein | chromosome | CDS | 1566262 | 1869 | + | 0.387373 |
NA | YPO2044 | putative hemolysin activator protein | chromosome | CDS | 2316429 | 1674 | + | 0.367981 |
NA | YPO2280 | putative phage-related secreted protein | chromosome | CDS | 2560790 | 1245 | + | 0.452209 |
NA | YPO0806 | prepilin peptidase | chromosome | CDS | 885548 | 843 | - | 0.358244 |
NA | YPO0815 | general secretion pathway protein E | chromosome | CDS | 892176 | 1512 | - | 0.39418 |
NA | YPO1920 | probable fimbrial usher protein | chromosome | CDS | 2173767 | 2592 | - | 0.494985 |
NA | YPO1697 | putative chaperone protein | chromosome | CDS | 1935923 | 753 | - | 0.446215 |
NA | YPO3879 | putative outer membrane usher protein | chromosome | CDS | 4353903 | 2628 | + | 0.471081 |
NA | YPO0811 | general secretion pathway protein I | chromosome | CDS | 889602 | 345 | - | 0.342029 |
NA | YPO0266 | secretion system apparatus protein | chromosome | CDS | 265448 | 2049 | + | 0.520254 |
NA | YPO1918 | probable pili assembly chaperone | chromosome | CDS | 2171665 | 741 | - | 0.442645 |
NA | YPO3950 | hypothetical protein | chromosome | CDS | 4448588 | 585 | + | 0.466667 |
NA | YPO0682 | MotA/TolQ/ExbB proton channel family protein | chromosome | CDS | 745023 | 714 | + | 0.515406 |
ccmD | YPO2737 | putative heme exporter protein D | chromosome | CDS | 3068520 | 303 | + | 0.518152 |
clpP | YPO3157 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 3520559 | 624 | - | 0.461538 |
cpxP | YPO0075 | hypothetical protein | chromosome | CDS | 84482 | 489 | + | 0.466258 |
ffh | YPO3296 | signal recognition particle protein | chromosome | CDS | 3674224 | 1362 | - | 0.483847 |
flgM | YPO1797 | negative regulator of flagellin synthesis | chromosome | CDS | 2042999 | 303 | - | 0.475248 |
flgN | YPO1796 | flagella synthesis protein FlgN | chromosome | CDS | 2042540 | 441 | - | 0.487528 |
flhA | YPO1791 | flagellar biosynthesis protein | chromosome | CDS | 2035572 | 2079 | + | 0.518037 |
flhB | YPO1790 | flagellar biosynthesis protein | chromosome | CDS | 2034412 | 1161 | + | 0.525409 |
flhB | YPO0706 | flagellar biosynthesis protein | chromosome | CDS | 768877 | 1134 | - | 0.446208 |
fliE | YPO0713 | putative flagellar hook-basal body complex protein | chromosome | CDS | 774704 | 381 | + | 0.514436 |
fliE | YPO1831 | flagellar basal body protein | chromosome | CDS | 2077374 | 312 | + | 0.496795 |
fliF | YPO1830 | flagellar M-ring protein | chromosome | CDS | 2075309 | 1713 | - | 0.532983 |
fliF | YPO0714 | flagellar M-ring protein | chromosome | CDS | 775094 | 1641 | + | 0.502133 |
fliH | YPO1828 | flagellar assembly protein | chromosome | CDS | 2073611 | 717 | - | 0.548117 |
fliH | YPO0716 | flagellar assembly protein | chromosome | CDS | 777751 | 720 | + | 0.538889 |
fliI | YPO1827 | flagellum-specific ATP synthase | chromosome | CDS | 2072194 | 1455 | - | 0.547079 |
fliI | YPO0717 | flagellum-specific ATP synthase | chromosome | CDS | 778463 | 1341 | + | 0.580164 |
fliJ | YPO1826 | flagellar protein | chromosome | CDS | 2071648 | 447 | - | 0.478747 |
fliN | YPO0710 | flagellar switch protein | chromosome | CDS | 771831 | 414 | - | 0.444444 |
fliN | YPO1822 | flagellar motor switch protein | chromosome | CDS | 2068142 | 417 | - | 0.494005 |
fliP | YPO0709 | putative flagellar assembly protein | chromosome | CDS | 771064 | 771 | - | 0.514916 |
fliP | YPO1820 | flagellar biosynthesis protein | chromosome | CDS | 2066785 | 741 | - | 0.51417 |
fliQ | YPO0708 | putative flagellar assembly protein | chromosome | CDS | 770790 | 270 | - | 0.451852 |
fliQ | YPO1820a | flagellar biosynthesis protein | chromosome | CDS | 2066410 | 270 | - | 0.522222 |
fliR | YPO0707 | putative flagellar assembly protein | chromosome | CDS | 770010 | 774 | - | 0.47416 |
fliR | YPO1819 | flagellar biosynthesis protein | chromosome | CDS | 2065625 | 783 | - | 0.496807 |
fliS | YPO0741 | putative flagellar protein | chromosome | CDS | 801304 | 381 | + | 0.388451 |
fliS | YPO1840 | flagellar protein FliS | chromosome | CDS | 2084555 | 399 | - | 0.466165 |
ftsY | YPO3814 | cell division protein | chromosome | CDS | 4279876 | 1626 | - | 0.483395 |
hmwA | YPO3247 | putative adhesin | chromosome | CDS | 3614872 | 5733 | - | 0.457527 |
hofB | YPO3426 | putative type II secretion system protein | chromosome | CDS | 3829978 | 1539 | + | 0.460689 |
hofC | YPO3427 | putative type II secretion system protein | chromosome | CDS | 3831513 | 1200 | + | 0.455 |
hxuB | YPO3248 | putative surface-exposed protein | chromosome | CDS | 3620645 | 1791 | - | 0.455053 |
ibeB | YPO3481 | probable outer membrane efflux lipoprotein | chromosome | CDS | 3886836 | 1407 | - | 0.509595 |
lepB | YPO2717 | signal peptidase I | chromosome | CDS | 3045221 | 999 | + | 0.49049 |
lspA | YPO0476 | signal peptidase II | chromosome | CDS | 507551 | 510 | + | 0.454902 |
marC | YPO2437 | multiple antibiotic resistance protein | chromosome | CDS | 2737063 | 684 | + | 0.438596 |
ogl | YPO1713 | oligogalacturonate lyase | chromosome | CDS | 1956239 | 1167 | + | 0.459297 |
ppdD | YPO3425 | putative prepilin peptidase dependent protein D precursor | chromosome | CDS | 3829521 | 465 | + | 0.447312 |
psaB | YPO1304 | chaperone protein PsaB precursor | chromosome | CDS | 1463379 | 822 | + | 0.377129 |
psaC | YPO1305 | outer membrane usher protein PsaC precursor | chromosome | CDS | 1464242 | 2514 | + | 0.492045 |
secA | YPO0564 | translocase | chromosome | CDS | 609376 | 2715 | + | 0.48582 |
secB | YPO0067 | export protein SecB | chromosome | CDS | 77742 | 477 | + | 0.484277 |
secD | YPO3189 | protein export protein SecD | chromosome | CDS | 3550292 | 1848 | - | 0.487554 |
secE | YPO3753 | translocase | chromosome | CDS | 4209155 | 384 | - | 0.486979 |
secF | YPO3188 | protein export protein SecF | chromosome | CDS | 3549313 | 969 | - | 0.474716 |
secG | YPO3499 | protein-export membrane protein | chromosome | CDS | 3909318 | 336 | - | 0.482143 |
secY | YPO0229 | preprotein translocase SecY | chromosome | CDS | 230847 | 1332 | + | 0.459459 |
shlB | YPO3720 | hemolysin activator protein | chromosome | CDS | 4156357 | 1686 | + | 0.469158 |
sohB | YPO2216 | peptidase family U7 protein | chromosome | CDS | 2489189 | 1047 | + | 0.483286 |
sppA | YPO2162 | protease IV | chromosome | CDS | 2431177 | 1851 | - | 0.480281 |
tatA | YPO3778 | Sec-independent protein translocase protein TatA | chromosome | CDS | 4240724 | 267 | - | 0.438202 |
tatB | YPO3777 | Sec-independent protein translocase protein TatB | chromosome | CDS | 4240058 | 663 | - | 0.505279 |
tatC | YPO3776 | Sec-independent protein translocase protein TatC | chromosome | CDS | 4239279 | 777 | - | 0.449163 |
tatE | YPO2597 | twin argininte translocase protein A | chromosome | CDS | 2918636 | 258 | + | 0.465116 |
tolB | YPO1124 | translocation protein TolB precursor | chromosome | CDS | 1270189 | 1293 | + | 0.4942 |
tolC | YPO0663 | outer membrane channel precursor protein | chromosome | CDS | 722560 | 1404 | - | 0.47151 |
tolQ | YPO1121 | TolQ colicin import protein | chromosome | CDS | 1267664 | 687 | + | 0.487627 |
tolR | YPO1122 | TolR colicin import membrane protein | chromosome | CDS | 1268363 | 429 | + | 0.468531 |
yajC | YPO3190 | preprotein translocase subunit YajC | chromosome | CDS | 3552167 | 336 | - | 0.440476 |
yapC | YPO2796 | putaive autotransporter protein | chromosome | CDS | 3125064 | 1917 | + | 0.47157 |
yapE | YPO3984 | putative autotransporter protein | chromosome | CDS | 4485558 | 3213 | - | 0.490819 |
yapF | YPO0606 | putative autotransporter protein | chromosome | CDS | 661725 | 2286 | - | 0.547244 |
yapH | YPO1004 | putative autotransporter protein | chromosome | CDS | 1119829 | 11118 | + | 0.529232 |