Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Genomic element: chromosome
Number of genes found: 167
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli O157:H7 str. Sakai, Sakai | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECs5276 | FimD | chromosome | CDS | 5399987 | 2637 | + | 0.483504 |
NA | ECs2373 | hypothetical protein | chromosome | CDS | 2344582 | 1257 | - | 0.516309 |
NA | ECs2193 | putative ante-terminator protein | chromosome | CDS | 2191067 | 555 | - | 0.452252 |
NA | ECs3890 | ExbB | chromosome | CDS | 3891607 | 735 | - | 0.533333 |
NA | ECs4054 | protein-export membrane protein | chromosome | CDS | 4064671 | 333 | - | 0.504505 |
NA | ECs5273 | FimA | chromosome | CDS | 5398006 | 549 | + | 0.517304 |
NA | ECs2776 | hypothetical protein | chromosome | CDS | 2717452 | 4038 | + | 0.496285 |
NA | ECs3731 | EivA | chromosome | CDS | 3729231 | 2061 | - | 0.373605 |
NA | ECs0551 | hypothetical protein | chromosome | CDS | 608198 | 456 | - | 0.58114 |
NA | ECs5062 | hypothetical protein | chromosome | CDS | 5152249 | 1467 | - | 0.558282 |
NA | ECs2909 | hypothetical protein | chromosome | CDS | 2860458 | 348 | + | 0.408046 |
NA | ECs5290 | putative invasin | chromosome | CDS | 5416459 | 4740 | - | 0.490928 |
NA | ECs2689 | flagellar biosynthesis protein | chromosome | CDS | 2647439 | 786 | + | 0.477099 |
NA | ECs1108 | putative head-tail preconnector protein | chromosome | CDS | 1193749 | 1506 | + | 0.604914 |
NA | ECs1283 | hemolysin activator-related protein | chromosome | CDS | 1353835 | 1620 | + | 0.424691 |
NA | ECs2116 | putative ATP-binding component of a transport system and adhesin protein | chromosome | CDS | 2116580 | 1401 | - | 0.529622 |
NA | ECs0143 | putative outer membrane porin protein | chromosome | CDS | 157241 | 2601 | - | 0.489043 |
NA | ECs2664 | flagellar protein FliS | chromosome | CDS | 2627824 | 411 | + | 0.493917 |
NA | ECs0111 | HofB | chromosome | CDS | 120203 | 1386 | - | 0.540404 |
NA | ECs0592 | putative fimbrial-like protein | chromosome | CDS | 650664 | 543 | + | 0.445672 |
NA | ECs4430 | putative fimbrial chaperone protein precursor | chromosome | CDS | 4456760 | 699 | - | 0.426323 |
NA | ECs3087 | heme exporter protein C | chromosome | CDS | 3028930 | 210 | - | 0.571429 |
NA | ECs1865 | putative outer membrane channel protein | chromosome | CDS | 1857164 | 1374 | + | 0.541485 |
NA | ECs0542 | hypothetical protein | chromosome | CDS | 585946 | 15876 | + | 0.611426 |
NA | ECs5275 | FimC | chromosome | CDS | 5399246 | 675 | + | 0.451852 |
NA | ECs3217 | putative fimbrial-like protein | chromosome | CDS | 3176535 | 549 | - | 0.448087 |
NA | ECs4839 | hypothetical protein | chromosome | CDS | 4905777 | 504 | + | 0.498016 |
NA | ECs4480 | hypothetical protein | chromosome | CDS | 4519109 | 4767 | + | 0.503671 |
NA | ECs0596 | putative fimbrial-like protein | chromosome | CDS | 655789 | 516 | + | 0.496124 |
NA | ECs3682 | prepilin peptidase dependent protein B | chromosome | CDS | 3685553 | 564 | - | 0.515957 |
NA | ECs1449 | FlgM | chromosome | CDS | 1488979 | 294 | - | 0.517007 |
NA | ECs0594 | putative outer membrane protein | chromosome | CDS | 652149 | 2610 | + | 0.477012 |
NA | ECs0022 | putative outer membrane usher protein precursor | chromosome | CDS | 19298 | 2451 | - | 0.410037 |
NA | ECs3724 | EpaQ | chromosome | CDS | 3724734 | 261 | - | 0.383142 |
NA | ECs0257 | FhiA | chromosome | CDS | 286244 | 1740 | - | 0.585057 |
NA | ECs2960 | putative protease/scaffold protein | chromosome | CDS | 2913472 | 1107 | - | 0.531165 |
NA | ECs4165 | preprotein translocase SecY | chromosome | CDS | 4177778 | 1332 | - | 0.496997 |
NA | ECs3725 | EpaP | chromosome | CDS | 3725005 | 666 | - | 0.345345 |
NA | ECs3730 | type III secretion system ATPase | chromosome | CDS | 3727907 | 1320 | - | 0.446212 |
NA | ECs4020 | putative fimbrial-like protein | chromosome | CDS | 4028966 | 585 | + | 0.459829 |
NA | ECs3434 | signal peptidase I | chromosome | CDS | 3424720 | 975 | - | 0.516923 |
NA | ECs2136 | hypothetical protein | chromosome | CDS | 2142655 | 666 | - | 0.504505 |
NA | ECs0102 | translocase | chromosome | CDS | 112884 | 2706 | + | 0.521803 |
NA | ECs3716 | EprK | chromosome | CDS | 3719204 | 735 | - | 0.364626 |
NA | ECs0773 | TolR | chromosome | CDS | 860355 | 429 | + | 0.515152 |
NA | ECs2589 | flagellar biosynthesis protein | chromosome | CDS | 2564902 | 2079 | - | 0.545455 |
NA | ECs0459 | protein export protein SecD | chromosome | CDS | 491276 | 1848 | + | 0.532468 |
NA | ECs0491 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 522729 | 624 | + | 0.503205 |
NA | ECs0772 | TolQ | chromosome | CDS | 859659 | 693 | + | 0.502164 |
NA | ECs1958 | putative antitermination protein | chromosome | CDS | 1939874 | 555 | + | 0.463063 |
NA | ECs1396 | AidA-I | chromosome | CDS | 1444150 | 2850 | + | 0.57193 |
NA | ECs2685 | flagellar motor switch protein | chromosome | CDS | 2645634 | 414 | + | 0.550725 |
NA | ECs2775 | hypothetical protein | chromosome | CDS | 2713479 | 4008 | + | 0.505988 |
NA | ECs0024 | putative fimbrial protein | chromosome | CDS | 22494 | 534 | - | 0.391386 |
NA | ECs4426 | putative fimbrial protein precursor | chromosome | CDS | 4452553 | 531 | - | 0.512241 |
NA | ECs0744 | putative fimbrial-like protein | chromosome | CDS | 828877 | 582 | - | 0.453608 |
NA | ECs0743 | truncated outer membrane protein | chromosome | CDS | 826656 | 2172 | - | 0.507366 |
NA | ECs2112 | putative fimbrial chaperone protein precursor | chromosome | CDS | 2112792 | 711 | - | 0.459916 |
NA | ECs5278 | FimG | chromosome | CDS | 5403176 | 504 | + | 0.525794 |
NA | ECs4583 | EscR | chromosome | CDS | 4617332 | 654 | - | 0.331804 |
NA | ECs0601 | NfrB | chromosome | CDS | 662098 | 2238 | - | 0.524129 |
NA | ECs4580 | EscU | chromosome | CDS | 4615257 | 1038 | - | 0.340077 |
NA | ECs0023 | putative fimbrial chaperone | chromosome | CDS | 21761 | 684 | - | 0.365497 |
NA | ECs4586 | hypothetical protein | chromosome | CDS | 4619226 | 324 | - | 0.314815 |
NA | ECs1742 | putative channel protein | chromosome | CDS | 1742641 | 648 | + | 0.481481 |
NA | ECs0540 | putative outer membrane transport protein | chromosome | CDS | 579895 | 1356 | + | 0.515487 |
NA | ECs1282 | hemagglutinin/hemolysin-related protein | chromosome | CDS | 1349940 | 3807 | + | 0.492251 |
NA | ECs2472 | protease IV | chromosome | CDS | 2448349 | 1857 | + | 0.521271 |
NA | ECs0110 | HofC | chromosome | CDS | 119011 | 1203 | - | 0.522028 |
NA | ECs1021 | putative fimbrial-like protein | chromosome | CDS | 1127331 | 549 | + | 0.420765 |
NA | ECs1028 | hypothetical protein | chromosome | CDS | 1133392 | 570 | + | 0.515789 |
NA | ECs3025 | putative channel/filament proteins | chromosome | CDS | 2956236 | 1437 | - | 0.549756 |
NA | ECs0847 | hypothetical protein | chromosome | CDS | 925662 | 993 | + | 0.442095 |
NA | ECs4670 | putative type 1 fimbrial protein | chromosome | CDS | 4703982 | 603 | - | 0.44942 |
NA | ECs2590 | flagellar biosynthesis protein | chromosome | CDS | 2566973 | 1149 | - | 0.548303 |
NA | ECs3220 | putative chaperone | chromosome | CDS | 3178031 | 759 | - | 0.528327 |
NA | ECs2688 | flagellar biosynthesis protein | chromosome | CDS | 2647162 | 270 | + | 0.503704 |
NA | ECs2006 | putative BigA-like protein | chromosome | CDS | 1984119 | 3036 | + | 0.488801 |
NA | ECs1278 | putative outer membrane usher protein | chromosome | CDS | 1343955 | 2523 | - | 0.512882 |
NA | ECs3827 | putative protein transport | chromosome | CDS | 3835606 | 1026 | - | 0.546784 |
NA | ECs0323 | hypothetical protein | chromosome | CDS | 342492 | 588 | - | 0.528912 |
NA | ECs4925 | hypothetical protein | chromosome | CDS | 5010088 | 426 | - | 0.535211 |
NA | ECs2110 | putative outer membrane protein | chromosome | CDS | 2110099 | 1149 | - | 0.448216 |
NA | ECs2113 | putative type 1 fimbrial protein precursor | chromosome | CDS | 2113863 | 564 | - | 0.468085 |
NA | ECs0350 | putative adhesin | chromosome | CDS | 368426 | 1095 | - | 0.426484 |
NA | ECs0145 | putative fimbrial-like protein | chromosome | CDS | 160695 | 597 | - | 0.460637 |
NA | ECs4582 | EscS | chromosome | CDS | 4617063 | 270 | - | 0.385185 |
NA | ECs4280 | putative DNA processing chain A | chromosome | CDS | 4291509 | 1203 | - | 0.502909 |
NA | ECs2679 | flagellar assembly protein | chromosome | CDS | 2640331 | 708 | + | 0.572034 |
NA | ECs1448 | FlgN | chromosome | CDS | 1488558 | 417 | - | 0.479616 |
NA | ECs4669 | putative fimbrial chaperone | chromosome | CDS | 4703495 | 384 | - | 0.380208 |
NA | ECs5277 | FimF | chromosome | CDS | 5402633 | 531 | + | 0.493409 |
NA | ECs4640 | inner membrane protein translocase component YidC | chromosome | CDS | 4671309 | 1647 | + | 0.536733 |
NA | ECs3515 | putative ATP-binding component of a transport system | chromosome | CDS | 3500324 | 4716 | - | 0.493427 |
NA | ECs0362 | AidA-I adhesin-like protein | chromosome | CDS | 379734 | 3984 | + | 0.49749 |
NA | ECs0548 | adhesin/invasin-like protein | chromosome | CDS | 606274 | 1017 | - | 0.485742 |
NA | ECs4021 | putative chaperone | chromosome | CDS | 4029630 | 696 | + | 0.441092 |
NA | ECs5274 | FimI | chromosome | CDS | 5398511 | 648 | + | 0.498457 |
NA | ECs4188 | HopD | chromosome | CDS | 4188661 | 468 | + | 0.478632 |
NA | ECs3721 | type III secretion protein | chromosome | CDS | 3722835 | 1122 | - | 0.33066 |
NA | ECs3221 | putative outer membrane protein | chromosome | CDS | 3178812 | 2640 | - | 0.545455 |
NA | ECs1707 | hypothetical protein | chromosome | CDS | 1700116 | 1644 | - | 0.49635 |
NA | ECs0829 | putative protease/scaffold protein | chromosome | CDS | 907957 | 2124 | + | 0.514124 |
NA | ECs2676 | flagellar basal body protein | chromosome | CDS | 2637184 | 315 | - | 0.536508 |
NA | ECs4559 | gamma intimin | chromosome | CDS | 4596458 | 2805 | - | 0.426025 |
NA | ECs4568 | EscN | chromosome | CDS | 4605694 | 1341 | - | 0.443699 |
NA | ECs1382 | HecB-like protein | chromosome | CDS | 1433646 | 735 | + | 0.534694 |
NA | ECs2176 | putative minor capsid protein precursor | chromosome | CDS | 2176525 | 1320 | - | 0.607576 |
NA | ECs4581 | EscT | chromosome | CDS | 4616287 | 777 | - | 0.33462 |
NA | ECs0144 | putative pilin chaperone | chromosome | CDS | 159883 | 726 | - | 0.483471 |
NA | ECs0112 | prelipin peptidase dependent protein | chromosome | CDS | 121598 | 441 | - | 0.53288 |
NA | ECs0593 | putative chaperone | chromosome | CDS | 651426 | 693 | + | 0.421356 |
NA | ECs1027 | putative fimbrial-like protein | chromosome | CDS | 1132863 | 564 | + | 0.475177 |
NA | ECs0383 | hypothetical protein | chromosome | CDS | 403183 | 276 | + | 0.387681 |
NA | ECs4431 | putative fimbrial major protein precursor | chromosome | CDS | 4457511 | 537 | - | 0.465549 |
NA | ECs2449 | spheroplast protein Y | chromosome | CDS | 2424653 | 486 | - | 0.506173 |
NA | ECs1667 | hypothetical protein | chromosome | CDS | 1664690 | 705 | + | 0.512057 |
NA | ECs0336 | putative invasin | chromosome | CDS | 353931 | 4254 | + | 0.524212 |
NA | ECs4487 | export protein SecB | chromosome | CDS | 4530493 | 468 | - | 0.512821 |
NA | ECs3733 | EivG | chromosome | CDS | 3732434 | 1704 | - | 0.387911 |
NA | ECs3683 | prepilin peptidase dependent protein A | chromosome | CDS | 3686107 | 471 | - | 0.535032 |
NA | ECs0742 | putative chaperone | chromosome | CDS | 825622 | 732 | - | 0.525956 |
NA | ECs2687 | flagellar biosynthesis protein | chromosome | CDS | 2646415 | 738 | + | 0.533875 |
NA | ECs2117 | hypothetical protein | chromosome | CDS | 2117977 | 4032 | - | 0.493056 |
NA | ECs4022 | putative outer membrane protein | chromosome | CDS | 4030354 | 2517 | + | 0.474374 |
NA | ECs1633 | minor capsid protein | chromosome | CDS | 1634310 | 1320 | + | 0.607576 |
NA | ECs1279 | putative chaperone protein | chromosome | CDS | 1346530 | 723 | - | 0.457815 |
NA | ECs4904 | translocase | chromosome | CDS | 4986375 | 384 | + | 0.546875 |
NA | ECs2917 | putative fimbrial-like protein | chromosome | CDS | 2867412 | 543 | - | 0.38674 |
NA | ECs4767 | sec-independent translocase | chromosome | CDS | 4818527 | 516 | + | 0.552326 |
NA | ECs4026 | disrupted fimbrial protein | chromosome | CDS | 4034457 | 474 | + | 0.483122 |
NA | ECs2916 | putative chaperone | chromosome | CDS | 2866650 | 675 | - | 0.38963 |
NA | ECs1844 | putative protease | chromosome | CDS | 1830039 | 1050 | + | 0.504762 |
NA | ECs4236 | hypothetical protein | chromosome | CDS | 4233629 | 540 | - | 0.546296 |
NA | ECs0541 | hypothetical protein | chromosome | CDS | 581353 | 4386 | + | 0.587779 |
NA | ECs2109 | putative fimbrial-like protein | chromosome | CDS | 2109555 | 531 | - | 0.455744 |
NA | ECs2677 | flagellar M-ring protein | chromosome | CDS | 2637713 | 1659 | + | 0.545509 |
NA | ECs4233 | putative transport portein | chromosome | CDS | 4231661 | 1239 | - | 0.54318 |
NA | ECs2681 | flagellar protein | chromosome | CDS | 2642492 | 444 | + | 0.529279 |
NA | ECs4575 | EscC | chromosome | CDS | 4611376 | 1539 | + | 0.373619 |
NA | ECs3081 | putative ATP-binding component of a transport system | chromosome | CDS | 3021318 | 2511 | - | 0.486659 |
NA | ECs4665 | putative fimbrial protein | chromosome | CDS | 4698445 | 1083 | - | 0.437673 |
NA | ECs4569 | T | chromosome | CDS | 4607018 | 2028 | - | 0.405325 |
NA | ECs4313 | FtsY | chromosome | CDS | 4321994 | 1497 | - | 0.53507 |
NA | ECs3889 | ExbD | chromosome | CDS | 3891175 | 426 | - | 0.5 |
NA | ECs2680 | flagellum-specific ATP synthase | chromosome | CDS | 2641100 | 1374 | + | 0.583697 |
NA | ECs3726 | type III secretion protein | chromosome | CDS | 3725660 | 987 | - | 0.356636 |
NA | ECs4151 | hypothetical protein | chromosome | CDS | 4167448 | 1125 | - | 0.509333 |
NA | ECs3473 | signal recognition particle protein Ffh | chromosome | CDS | 3466442 | 1362 | - | 0.54185 |
NA | ECs1276 | putative chaperone protein | chromosome | CDS | 1341919 | 630 | - | 0.461905 |
NA | ECs2732 | putative head-tail preconnector protein | chromosome | CDS | 2683952 | 1506 | - | 0.604914 |
NA | ECs4667 | putative outer membrane usher protein precursor | chromosome | CDS | 4700637 | 2535 | - | 0.485207 |
NA | ECs2108 | putative fimbrial-like protein | chromosome | CDS | 2109039 | 504 | - | 0.446429 |
NA | ECs1022 | putative chaperone | chromosome | CDS | 1127962 | 702 | + | 0.457265 |
NA | ECs2915 | putative outer membrane protein | chromosome | CDS | 2864154 | 2481 | - | 0.448206 |
NA | ECs4768 | Sec-independent protein translocase | chromosome | CDS | 4819045 | 777 | + | 0.517375 |
NA | ECs1280 | putative major pilin protein | chromosome | CDS | 1347317 | 561 | - | 0.511586 |
NA | ECs0610 | putative resistance protein | chromosome | CDS | 678260 | 1383 | + | 0.5141 |
NA | ECs4573 | EscJ | chromosome | CDS | 4610343 | 573 | + | 0.368237 |
NA | ECs4279 | hypothetical protein | chromosome | CDS | 4290870 | 594 | + | 0.503367 |
lspA | ECs0030 | signal peptidase II | chromosome | CDS | 29618 | 495 | + | 0.533333 |
secF | ECs0460 | protein export protein SecF | chromosome | CDS | 493134 | 972 | + | 0.51749 |
tatA | ECs4766 | twin argininte translocase protein A | chromosome | CDS | 4818254 | 270 | + | 0.455556 |
tatE | ECs0665 | twin argininte translocase protein A | chromosome | CDS | 740303 | 204 | + | 0.5 |
tolB | ECs0775 | translocation protein TolB precursor | chromosome | CDS | 862165 | 1293 | + | 0.533643 |
tolC | ECs3923 | outer membrane channel precursor protein | chromosome | CDS | 3924203 | 1488 | + | 0.516129 |
yajC | ECs0458 | preprotein translocase subunit YajC | chromosome | CDS | 490916 | 333 | + | 0.495495 |