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Gene list

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COG category: Function unknown
Genomic element: pSS_046

Number of genes found: 5

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# Shigella sonnei Ss046, Ss046

>SSO_P212 ipaH1.4, invasion plasmid antigen
ATGATTAAATCAACCAATATACAGGCAATCGGTTCTAGTATTATGCATCA
AATAAACAATATATACTCGTTAACTCCATTTTCTTTACCTATGGAACTGA
CTCCATCTTGTAATGAATTTTATTTAAAAGCCTGGAGTGAATGGGAAAAG
AACGGTACCCCAGGCGAGCAACGCAATATCGCCTTCAATAGGCTGAAAAT
ATGTTTACAAAATCAAGAGGCAGAATTAAATTTATCTGAGTTAGATTTAA
AAACATTACCAGATTTACCGCCTCAGATAACAACACTGGAAATAAGAAAA
AACCTATTAACACATCTCCCTGATTTACCACCAATGCTTAAGGTAATACA
TGCTCAATTTAATCAACTGGAAAGCTTACCTGCCTTACCCGAGACGTTAG
AAGAGCTTAATGCGGGTGATAACAAGATAAAAGAATTACCATTTCTTCCT
GAAAATCTAACTCATTTACGGGTTCATAATAACCGATTGCATATTCTGCC
ACTATTGCCACCGGAACTAAAATTACTGGTAGTTTCTGGAAACAGATTAG
ACAGCATTCCCCCCTTTCCAGATAAGCTTGAAGGGCTGGCTCTGGCTAAT
AATTTTATAGAACAACTACCGGAATTACCTTTTAGTATGAACAGGGCTGT
GCTAATGAATAATAATCTGACAACACTTCCGGAAAGTGTCCTGAGATTAG
CTCAGAATGCCTTCGTAAATGTTGCAGGTAATCCATTGTCTGGCCATACC
ATGCGTACACTACAACAAATAACCACCGGACCAGATTATTCTGGTCCTCG
AATATTTTTCTCTATGGGAAATTCTGCCACAATTTCCGCTCCAGAACACT
CCCTGGCTGATGCCGTGACAGCATGGTTCCCGGAAAACAAACAATCTGAT
GTATCACAGATATGGCATGCTTTTGAACATGAAGAGCATGCCAACACCTT
TTCCGCGTTCCTTGACCGCCTTTCCGATACCGTCTCTGCACGCAATACCT
CCGGATTCCGTGAACAGGTCGCTGCATGGCTGGAAAAACTCAGTGCCTCT
GCGGAGCTTCGACAGCAGTCTTTCGCTGTTGCTGCTGATGCCACTGAGAG
CTGTGAGGACCGTGTCGCGCTCACATGGAACAATCTCCGGAAAACCCTCC
TGGTCCATCAGGCATCAGAAGGCCTTTTCGATAATGATACCGGCGCTCTG
CTCTCCCTGGGCAGGGAAATGTTCCGCCTCGAAATTCTGGAGGACATTGC
CCGGGATAAAGTCAGAACTCTCCATTTTGTGGATGAGATAGAAGTCTACC
TGGCCTTCCAGACCATGCTCGCAGAGAAACTTCAGCTCTCCACTGCCGTG
AAGGAAATGCGTTTCTATGGCGTGTCGGGAGTGACAGCAAATGACCTCCG
CACTGCCGAAGCCATGGTCAGAAGCCGTGAAGAGAATGAATTTACGGACT
GGTTCTCCCTCTGGGGACCATGGCATGCTGTACTGAAGCGTACGGAAGCT
GACCGCTGGGCGCAGGCAGAAGAGCAGAAGTATGAGATGCTGGAGAATGA
GTACTCTCAGAGGGTGGCTGACCGGCTGAAAGCATCAGGTCTGAGCGGTG
ATGCGGATGCGGAGAGGGAAGCCGGTGCACAGGTGATGCGTGAGACTGAA
CAGCAGATTTACCGTCAGCTGACTGACGAGGTACTGGCCCTGCGATTGTC
TGAAAACGGCTCAAATCATATCGCATAA
>SSO_P059 ipaH4.5, invasion plasmid antigen
ATGAAACCGATCAACAATCATTCTTTTTTTCGTTCCCTTTGTGGCTTATC
ATGTATATCTCGTTTATCGGTAGAAGAACAGTGTACCAGAGATTACCACC
GCATCTGGGATGACTGGGCTAGGGAAGGAACAACAACAGAAAATCGCATC
CAGGCGGTTCGATTATTGAAAATATGTCTGGATACCCGGGAGCCTGTTCT
CAATTTAAGCTTACTGAAACTACGTTCTTTACCACCACTCCCTTTGCATA
TACGTGAACTTAATATTTCCAACAATGAGTTAATCTCCCTACCTGAAAAT
TCTCCGCTTTTGACAGAACTTCATGTAAATGGTAACAACTTGAATATACT
CCCGACACTTCCATCTCAACTGATTAAGCTTAATATTTCATTCAATCGAA
ATTTGTCATGTCTGCCATCATTACCACCATATTTACAATCACTCTCGGCA
CGTTTTAATAGTCTGGAGACGTTACCAGAGCTTCCATCAACGCTAACAAT
ATTACGTATTGAAGGTAATCGCCTTACTGTCTTGCCTGAATTGCCTCATA
GACTACAAGAACTCTTTGTTTCCGGCAACAGACTACAGGAACTACCAGAA
TTTCCTCAGCGCTTAAAATATTTGAAGGTAGGTGAAAATCAACTACGCAG
ATTATCCAGATTACCGCAAGAACTATTGGCACTGGATGTTTCCAATAACC
TACTAACTTCATTACCCGAAAATATAATCACATTGCCCATTTGTACGAAT
GTTAACATTTCAGGGAATCCATTGTCGACTCGCGTTCTGCAATCCCTGCA
AAGATTAACCTCTTCGCCGGACTACCACGGCCCGCAGATTTACTTCTCCA
TGAGTGACGGACAACAGAATACACTCCATCGCCCCCTGGCTGATGCCGTG
ACAGCATGGTTCCCGGAAAACAAACAATCTGATGTATCACAGATATGGCA
TGCTTTTGAACATGAAGAGCATGCCAACACCTTTTCCGCGTTCCTTGACC
GCCTTTCCGATACCGTCTCTGCACGCAATACCTCCGGATTCCGTGAACAG
GTCGCTGCATGGCTGGAAAAACTCAGTGCCTCTGCGGAGCTTCGACAGCA
GTCTTTCGCTGTTGCTGCTGATGCCACTGAGAGCTGTGAGGACCGTGTCG
CGCTCACATGGAACAATCTCCGGAAAACCCTCCTGGTCCATCAGGCATCA
GAAGGCCTTTTCGATAATGATACCGGCGCTCTGCTCTCCCTGGGCAGGGA
AATGTTCCGCCTCGAAATTCTGGAGGACATTGCCCGGGATAAAGTCAGAA
CTCTCCATTTTGTGGATGAGATAGAAGTCTACCTGGCCTTCCAGACCATG
CTCGCAGAGAAACTTCAGCTCTCCACTGCCGTGAAGGAAATGCGTTTCTA
TGGCGTGTCGGGAGTGACAGCAAATGACCTCCGCACTGCCGAAGCCATGG
TCAGAAGCCGTGAAGAGAATGAATTTACGGACTGGTTCTCCCTCTGGGGA
CCATGGCATGCTGTACTGAAGCGTACGGAAGCTGACCGCTGGGCGCAGGC
AGAAGAGCAGAAGTATGAGATGCTGGAGAATGAGTACTCTCAGAGGGTGG
CTGACCGGCTGAAAGCATCAGGTCTGAGCGGTGATGCGGATGCGGAGAGG
GAAGCCGGTGCACAGGTGATGCGTGAGACTGAACAGCAGATTTACCGTCA
GTTGACTGACGAGGTACTGGCCTGA
>SSO_P058 ipaH7.8, invasion plasmid antigen
ATGTTCTCTGTAAATAATACACACTCATCAGTTTCTTGCTCCCCCTCTAT
TAACTCAAACTCAACCAGTAATGAATATTATCTGAGAATCCTGACTGAAT
GGGAAAAGAACTCTTCTCCCGGGGAAGAGCGAGGCATTGCTTTTAACAGA
CTCTCCCAGTGCTTTCAGAATCAAGAAGCAGTATTAAATTTATCAGACCT
AAATTTGACGTCTCTTCCCGAATTACCAAAGCATATTTCTGCTTTGATTG
TAGAAAATAATAAATTAACATCATTGCCAAAGCTGCCTGCATTTCTCAAA
GAACTTAATGCTGATAATAACAGGCTTTCTGTGATACCAGAACTTCCTGA
GTCATTAACAACTTTAAGTGTTCGTTCTAATCAACTGGAAAACCTTCCTG
TTTTGCCAAACCATTTAACATCATTATTTGTTGAAAATAACAGGCTATAT
AACTTACCGGCTCTTCCCGAAAAATTGAAATTTTTACATGTTTATTATAA
CAGGCTGACAACATTACCCGACTTACCGGATAAACTGGAAATTCTCTGTG
CTCAGCGCAATAATCTGGTTACTTTTCCTCAATTTTCTGATAGAAACAAT
ATCAGACAAAAGGAATATTATTTTCATTTTAATCAGATAACCACTCTTCC
GGAGAGTTTTTCACAATTAGATTCAAGTTACAGGATTAATATTTCAGGGA
ATCCATTGTCGACTCGCGTTCTGCAATCCCTGCAAAGATTAACCTCTTCG
CCGGACTACCACGGCCCGCAGATTTACTTCTCCATGAGTGACGGACAACA
GAATACACTCCATCGCCCCCTGGCTGATGCCGTGACAGCATGGTTCCCGG
AAAACAAACAATCTGATGTATCACAGATATGGCATGCTTTTGAACATGAA
GAGCATGCCAACACCTTTTCCGCGTTCCTTGACCGCCTTTCCGATACCGT
CTCTGCACGCAATACCTCCGGATTCCGTGAACAGGTCGCTGCATGGCTGG
AAAAACTCAGTGCCTCTGCGGAGCTTCGACAGCAGTCTTTCGCTGTTGCT
GCTGATGCCACTGAGAGCTGTGAGGACCGTGTCGCGCTCACATGGAACAA
TCTCCGGAAAACCCTCCTGGTCCATCAGGCATCAGAAGGCCTTTTCGATA
ATGATACCGGCGCTCTGCTCTCCCTGGGCAGGGAAATGTTCCGCCTCGAA
ATTCTGGAGGACATTGCCCGGGATAAAGTCAGAACTCTCCATTTTGTGGA
TGAGATAGAAGTCTACCTGGCCTTCCAGACCATGCTCGCAGAGAAACTTC
AGCTCTCCACTGCCGTGAAGGAAATGCGTTTCTATGGCGTGTCGGGAGTG
ACAGCAAATGACCTCCGCACTGCCGAAGCCATGGTCAGAAGCCGTGAAGA
GAATGAATTTACGGACTGGTTCTCCCTCTGGGGACCATGGCATGCTGTAC
TGAAGCGTACGGAAGCTGACCGCTGGGCGCAGGCAGAAGAGCAGAAGTAT
GAGATGCTGGAGAATGAGTACTCTCAGAGGGTGGCTGACCGGCTGAAAGC
ATCAGGTCTGAGCGGTGATGCGGATGCGGAGAGGGAAGCCGGTGCACAGG
TGATGCGTGAGACTGAACAGCAGATTTACCGTCAGTTGACTGACGAGGTA
CTGGCCCTGCGATTGTCTGAAAACGGCTCACGACTGCACCATTCATAA
>SSO_P167 ipaH9.8, invasion plasmid antigen
ATGTTACCGATAAATAATAACTTTTCATTGCCCCAAAATTCTTTTTATAA
CACTATTTCCGGTACATATGCTGATTACTTTTCAGCATGGGATAAATGGG
AAAAACAAGCGCTCCCCGGTGAAGAGCGTGATGAGGCTGTCTCCCGACTT
AAAGAATGTCTTATCAATAATTCCGATGAACTTCGACTGGACCGTTTAAA
TCTGTCCTCGCTACCTGACAACTTACCAGCTCAGATAACGCTGCTCAATG
TATCATATAATCAATTAACTAACCTACCTGAACTGCCTGTTACGCTAAAA
AAATTATATTCCGCCAGCAATAAATTATCAGAATTGCCCGTGCTACCTCC
TGCGCTGGAGTCACTTCAGGTACAACACAATGAGCTGGAAAACCTGCCAG
CTTTACCCGATTCGTTATTGACTATGAATATCAGCTATAACGAAATAGTC
TCCTTACCATCGCTCCCACAGGCTCTTAAAAATCTCAGAGCGACCCGTAA
TTTCCTCACTGAGCTACCAGCATTTTCTGAGGGAAATAATCCCGTTGTCA
GAGAGTATTTTTTTGATAGAAATCAGATAAGTCATATCCCGGAAAGCATT
CTTAATCTGAGGAATGAATGTTCAATACATATTAGTGATAACCCATTATC
ATCCCATGCTCTGCAAGCCCTGCAAAGATTAACCTCTTCGCCGGACTACC
ACGGCCCACGGATTTACTTCTCCATGAGTGACGGACAACAGAATACACTC
CATCGCCCCCTGGCTGATGCCGTGACAGCATGGTTCCCGGAAAACAAACA
ATCTGATGTATCACAGATATGGCATGCTTTTGAACATGAAGAGCATGCCA
ACACCTTTTCCGCGTTCCTTGACCGCCTTTCCGATACCGTCTCTGCACGC
AATACCTCCGGATTCCGTGAACAGGTCGCTGCATGGCTGGAAAAACTCAG
TGCCTCTGCGGAGCTTCGACAGCAGTCTTTCGCTGTTGCTGCTGATGCCA
CTGAGAGCTGTGAGGACCGTGTCGCGCTCACATGGAACAATCTCCGGAAA
ACCCTCCTGGTCCATCAGGCATCAGAAGGCCTTTTCGATAATGATACCGG
CGCTCTGCTCTCCCTGGGCAGGGAAATGTTCCGCCTCGAAATTCTGGAGG
ACATTGCCCGGGATAAAGTCAGAACTCTCCATTTTGTGGATGAGATAGAA
GTCTACCTGGCCTTCCAGACCATGCTCGCAGAGAAACTTCAGCTCTCCAC
TGCCGTGAAGGAAATGCGTTTCTATGGCGTGTCGGGAGTGACAGCAAATG
ACCTCCGCACTGCCGAAGCCATGGTCAGAAGCCGTGAAGAGAATGAATTT
ACGGACTGGTTCTCCCTCTGGGGACCATGGCATGCTGTACTGAAGCGTAC
GGAAGCTGACCGCTGGGCGCAGGCAGAAGAGCAGAAGTATGAGATGCTGG
AGAATGAGTACTCTCAGAGGGTGGCTGACCGGCTGAAAGCATCAGGTCTG
AGCGGTGATGCGGATGCGGAGAGGGAAGCCGGTGCACAGGTGATGCGTGA
GACTGAACAGCAGATTTACCGTCAGCTGACTGACGAGGTACTGGCCCTGC
GATTGTCTGAAAACGGCTCACAACTGCACCATTCATAA
>SSO_P181 virK, VirK
ATGTTTTCTGTAAGTAACTTATCATTTATCGGTTTCCTTAAAAGGATTGT
TTTTTCCTCAGATTCACTCCCGGGGAAGTGGGAACACAGAAAATTCCGGT
TCATGTACATTTTGCGATGTGCTATAAATCCGGTTGCCAGTATTCGATAT
TATTACGAACTGCGTTCCTTGCAGTGCATTGAGGATATTCTGGCAATACA
ACCCACGTTGCCAGCAAGAATTCATCGACCTTATTTGCATAAAGGGGGGC
GAGCCTGGTCCCGGGGGCAATATATTCTTGAGCATTATCGCTTTGTGCAA
AATTTGCCAGAAAAATATTCTGAATTTTTGTTTCCACAAAAATCGGTATC
ATTAGTCCAATTCATCGGGAAAGATGGAGAGGATTTTGATATCCAGTGTT
CTCCCAGTGGTTTTGACCGGGAAGGAGAGTTGATGTTGTCATTGTTTTTC
AATAAAATAGTGATTGCCCGGTTAACATTTTCAGTCATTCTGACTCAAAA
TGGACACACCGCTTTTATTGGCGGATTACAGGGAGCCCCCAAAAATACCG
GACCTGATGTTATTCGGTGCGCAACCCGGGCCTGTTATGGGCTTTTCCCA
AAACGGATTATTTTTGAAGCATTTTGTGCGTTGATGAAAGCTTGTAATGT
CTCTGAGTGTCTGGCAGTCAGTGAGCACAGTCATGTTTTCCGGCAATTGA
GATACTGGTATCAGAAACGCAAAACCTTTGTTGCTGTCTACAGTGATTTC
TGGGAGTCTGTAGCAGGGAAAACCTGTGGTGACTGGTACAAATTACCAAC
ACAGGTGGTTCGAAAGCCGCTAAGCAATATAGCTAGTAAAAAACGCTCTG
AGTATCGAAAACGATACGCTTTGTTGGATTATATCCATGAAACTGCTATC
CGCTCTTTGGATGCATATCCTGTAAACTCAGAACATCAGGACTTAAATTA
A