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2024-06-26 09:17:29

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome

Number of genes found: 77

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Yersinia pestis biovar Microtus str. 91001, 91001
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA YP_3494 putative virulence determinantSubName: Full=Putative virulence determinant; chromosome CDS3972453 9333 + 0.372335
NA YP_1427 putative siderophore biosynthetic enzymeSubName: Full=Putative siderophore biosynthetic enzyme; chromosome CDS1578174 1815 - 0.426446
NA YP_1582 short chain dehydrogenaseSubName: Full=Putative oxidoreductase; chromosome CDS1730741 2073 - 0.520984
NA YP_3829 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS4357112 783 - 0.50447
NA YP_3827 hypothetical proteinSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS4355914 624 - 0.482372
NA YP_3452 hypothetical proteinSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS3923357 834 - 0.383693
NA YP_3427 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3876832 1128 + 0.490248
NA YP_2577 putative fimbrial proteinSubName: Full=Putative fimbrial protein; SubName: Full=Uncharacterized protein; chromosome CDS2856168 1032 + 0.453488
NA YP_3830 putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter ATP-binding protein; SubName: Full=Putative ATP-binding component of ABC transport system; chromosome CDS4358112 819 - 0.492063
NA YP_3262 putative carboxymethylenebutenolidaseRecName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; AltName: Full=Dienelactone hydrolase; Short=DLH; chromosome CDS3637531 873 - 0.498282
NA YP_0846 putative permeaseSubName: Full=Putative oxidoreductase; SubName: Full=Putative permease; chromosome CDS917790 2442 + 0.547093
NA YP_3828 hypothetical proteinSubName: Full=Putative membrane protein; chromosome CDS4356550 573 - 0.47993
NA YP_3335 metalloproteaseSubName: Full=Metalloprotease; SubName: Full=Putative secreted metalloprotease; chromosome CDS3731235 1338 + 0.420777
acpP1 YP_1354 putative acyl carrier proteinSubName: Full=Putative acyl carrier protein; chromosome CDS1483121 249 + 0.337349
acpP3 YP_2254 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS2501439 237 - 0.434599
alcA YP_1419 putative siderophore biosynthetic enzymeSubName: Full=Putative siderophore biosynthetic enzyme; SubName: Full=Putative siderophore biosynthetic protein; chromosome CDS1567796 1299 + 0.431101
bioC YP_1007 biotin synthesis protein BioCRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS1084838 804 - 0.538557
caiC YP_2334 O-succinylbenzoic acid--CoA ligaseSubName: Full=Putative O-succinylbenzoic acid--CoA ligase; EC=6.2.1.26; chromosome CDS2595988 1416 - 0.576977
elbB YP_3807 enhancing lycopene biosynthesis protein 2SubName: Full=Enhancing lycopene biosynthesis protein 2; SubName: Full=Sigma cross-reacting protein 27A (SCRP-27A); chromosome CDS4333400 654 - 0.457187
entF1 YP_3423 putative siderophore biosysnthesis proteinSubName: Full=Putative siderophore biosysnthesis protein; chromosome CDS3858296 9936 + 0.488124
entF2 YP_3424 putative siderophore biosysnthesis proteinSubName: Full=Putative siderophore biosysnthesis protein; chromosome CDS3868275 1653 + 0.534785
entF3 YP_3425 putative siderophore biosysnthesis proteinSubName: Full=Putative siderophore biosysnthesis protein; chromosome CDS3869940 5829 + 0.492023
fabB YP_2406 3-oxoacyl-(acyl carrier protein) synthaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS2675321 1200 - 0.495833
fabF2 YP_1167 chromosome pseudo1255568 1029 + 0.525753
fabF3 YP_1347 putative beta-ketoacyl-[acyl-carrier-protein] synthaseSubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] synthase; SubName: Full=Putative beta-ketoacyl-acp synthase; chromosome CDS1477023 1284 + 0.433022
fabF4 YP_2253 3-oxoacyl-(acyl carrier protein) synthaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS2500103 1242 - 0.492754
fabG YP_2255 3-ketoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS2501829 735 - 0.482993
fabG1 YP_0336 short chain dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS352779 771 + 0.499352
fabG2 YP_0733 short chain dehydrogenaseSubName: Full=Probable short-chain dehydrogenase; SubName: Full=Putative dehydrogenase; chromosome CDS795878 681 + 0.503671
fabG3 YP_0843 short chain dehydrogenaseSubName: Full=Probable short-chain dehydrogenase; EC=1.-.-.-; SubName: Full=Putative oxidoreductase; chromosome CDS915350 777 - 0.526384
fabG4 YP_1304 putative short chain oxidoreductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; SubName: Full=Putative short chain oxidoreductase; chromosome CDS1428130 816 + 0.58701
fabG5 YP_1344 putative short chain dehydrogenaseSubName: Full=2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS1474550 747 - 0.420348
fabG6 YP_1348 putative beta-ketoacyl-[acyl-carrier-protein] reductaseSubName: Full=Putative 3-ketoacyl-acyl carrier protein reductase; SubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] reductase; chromosome CDS1478254 792 + 0.433081
fabG7 YP_1352 putative short chain dehydrogenaseSubName: Full=Putative 3-oxoacyl-acyl carrier protein reductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS1481768 789 + 0.395437
fabG8 YP_1840 putative dehydrogenaseSubName: Full=Putative dehydrogenase; SubName: Full=Putative oxidoreductase; chromosome CDS2050366 681 - 0.403818
fabG9 YP_2012 short chain dehydrogenaseSubName: Full=Putative oxidoreductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS2234114 849 - 0.508834
fadD YP_1917 acyl-CoA synthaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; chromosome CDS2136325 1740 + 0.481609
grsT YP_3428 putative thioesteraseSubName: Full=Putative thioesterase; SubName: Full=Thioesterase; chromosome CDS3877949 768 + 0.488281
hpaB YP_1624 4-hydroxyphenylacetate 3-monooxygenaseSubName: Full=4-hydroxyphenylacetate 3-monooxygenase; EC=1.14.13.3; SubName: Full=Putative component B of 4-hydroxyphenylacetic acid-hydroxylase; chromosome CDS1773368 1563 - 0.486884
hpaH YP_1627 2-oxo-hept-3-ene-1,7-dioate hydrataseSubName: Full=2-oxo-hept-3-ene-1,7-dioate hydratase; SubName: Full=Putative 2-oxo-hept-3-ene-1,7-dioate hydratase; chromosome CDS1777208 804 - 0.50995
hutI YP_1714 imidazolonepropionaseRecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; chromosome CDS1895670 1221 - 0.502867
idnO YP_2350 gluconate 5-dehydrogenaseSubName: Full=Gluconate 5-dehydrogenase; chromosome CDS2615393 870 + 0.441379
irp1 YP_1653 yersiniabactin biosynthetic proteinSubName: Full=Yersiniabactin biosynthetic protein; chromosome CDS1803214 9492 - 0.60767
irp2 YP_1654 yersiniabactin biosynthetic proteinSubName: Full=Irp2 protein; SubName: Full=Ybt peptide synthetase HMWP2; SubName: Full=Yersiniabactin biosynthetic protein; chromosome CDS1812793 6126 - 0.601371
iucC YP_3448 putative siderophore biosynthesis protein IucCSubName: Full=Aerobactin synthetase (Subunit beta); SubName: Full=Putative siderophore biosynthesis protein IucC; chromosome CDS3917254 1749 - 0.539165
iucD YP_3447 putative siderophore biosynthesis protein IucDSubName: Full=Putative siderophore biosynthesis protein IucD; chromosome CDS3915929 1329 - 0.536494
kduD YP_1749 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS1938275 807 - 0.486989
kduD2 YP_3535 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS4023569 756 + 0.531746
menF YP_2339 menaquinone-specific isochorismate synthaseSubName: Full=Isochorismate hydroxymutase 2; SubName: Full=Menaquinone-specific isochorismate synthase; chromosome CDS2601979 1374 - 0.5131
mhpD2 YP_1454 putative hydrolaseSubName: Full=Putative hydrolase; EC=5.3.3.-; SubName: Full=Putative isomerase; chromosome CDS1611622 843 + 0.5172
mhpD3 YP_1925 putative fumarylacetoacetate hydrolase family proteinSubName: Full=Putative fumarylacetoacetate hydrolase family protein; chromosome CDS2143778 543 + 0.475138
paaI1 YP_2193 Uncharacterized protein, possibly involved in aromatic compounds catabolismSubName: Full=Uncharacterized protein; SubName: Full=Uncharacterized protein, possibly involved in aromatic compounds catabolism; chromosome CDS2438879 417 - 0.53717
paaI2 YP_3213 Uncharacterized protein, possibly involved in aromatic compounds catabolismSubName: Full=Uncharacterized protein; SubName: Full=Uncharacterized protein, possibly involved in aromatic compounds catabolism; chromosome CDS3585498 471 - 0.484076
phnL2 YP_0845 putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter ATP-binding protein; SubName: Full=Putative ATP-binding component of a transport system; chromosome CDS917119 687 + 0.521106
pldB1 YP_0867 LysophospholipaseSubName: Full=Lysophospholipase; SubName: Full=Uncharacterized protein; chromosome CDS932445 1764 + 0.521542
pncA YP_1960 putative pyrazinamidase/nicotinamidaseSubName: Full=Putative pyrazinamidase/nicotinamidase; EC=3.5.1.19; SubName: Full=Uncharacterized protein; chromosome CDS2178508 648 - 0.496914
rrmA YP_1488 rRNA (guanine-N1-)-methyltransferaseSubName: Full=Putative enzyme; SubName: Full=rRNA (Guanine-N1-)-methyltransferase; EC=2.1.1.51; chromosome CDS1647777 840 + 0.485714
smtA1 YP_0717 SAM-dependent methyltransferaseSubName: Full=Putative biotin synthesis protein; SubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS775548 522 + 0.43295
smtA2 YP_1191 putative methyltransferaseSubName: Full=Putative methyltransferase; SubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS1289566 792 - 0.479798
smtA3 YP_1250 putative ABC transport proteinSubName: Full=Putative ABC transport protein; chromosome CDS1364989 798 - 0.498747
smtA4 YP_1839 SAM-dependent methyltransferaseSubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS2049602 660 - 0.443939
smtA5 YP_1892 SAM-dependent methyltransferaseRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2109609 972 - 0.52572
smtA6 YP_1893 SAM-dependent methyltransferaseRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2110577 804 - 0.49005
smtA8 YP_2769 SAM-dependent methyltransferaseSubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS3074451 720 - 0.466667
smtA9 YP_3336 SAM-dependent methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS3732637 771 - 0.574578
sufI1 YP_0276 hypothetical proteinRecName: Full=Blue copper oxidase CueO; AltName: Full=Copper efflux oxidase; Flags: Precursor; chromosome CDS282546 1776 + 0.522523
sufI2 YP_2989 putative cell division proteinRecName: Full=Cell division protein FtsP; Flags: Precursor; chromosome CDS3326206 1425 + 0.524912
tauD YP_0184 putative taurine dioxygenaseSubName: Full=Putative taurine dioxygenase; SubName: Full=Taurine dioxygenase; chromosome CDS201715 867 + 0.507497
tehB YP_1693 putative tellurite resistance proteinSubName: Full=Putative tellurite resistance protein; SubName: Full=TehB protein; SubName: Full=Tellurite resistance; chromosome CDS1867254 888 + 0.45045
ucpA YP_1453 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1610834 741 + 0.535762
ybtD YP_1468 putative phosphopantetheinyl transferaseSubName: Full=Putative phosphopantetheinyl transferase; chromosome CDS1627907 741 + 0.468286
ybtE YP_1650 yersiniabactin siderophore biosynthetic proteinSubName: Full=Salicyl-AMP ligase; SubName: Full=Salicyl-AMP ligase YbtE; SubName: Full=YbtE protein; SubName: Full=Yersiniabactin 2,3-dihydoxybenzoate-AMP ligase; SubName: Full=Yersiniabactin siderophore biosynthetic protein; chromosome CDS1799736 1578 - 0.588086
ybtT YP_1651 yersiniabactin biosynthetic protein YbtTSubName: Full=YbtT protein; SubName: Full=Yersiniabactin biosynthesis thioesterase-like protein; SubName: Full=Yersiniabactin biosynthetic protein YbtT; chromosome CDS1801317 804 - 0.583333
ybtU YP_1652 yersiniabactin biosynthetic protein YbtUSubName: Full=Thiazolinyl-S-HMWP1 reductase; SubName: Full=Yersiniabactin biosynthetic protein YbtU; chromosome CDS1802117 1161 - 0.601206
ypeI YP_2275 N-acylhomoserine lactone synthase YpeIRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS2524043 657 + 0.365297
yspI YP_3455 N-acylhomoserine lactone synthase YspIRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS3927235 651 - 0.411674
ysuG YP_1421 putative siderophore biosynthetic enzymeSubName: Full=Putative siderophore biosynthetic enzyme; SubName: Full=Putative siderophore biosynthetic protein; chromosome CDS1569624 1890 + 0.469841