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Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 167

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Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA4084 putative glutathione S transferasechromosome CDS4257055 669 + 0.54559
NA SPA2399 antiterminationchromosome CDS2509699 624 - 0.50641
NA SPA3061 dsbA-like proteinchromosome CDS3166778 672 + 0.46131
NA SPA1008 hypothetical proteinchromosome CDS1080832 615 - 0.43252
NA SPA0675 glutathione-S-transferase-family proteinchromosome CDS757638 645 + 0.562791
NA SPA2496 ClpB-like proteinchromosome CDS2595182 2664 - 0.590841
NA SPA2160 putative ATPase involved in DNA repairchromosome CDS2251022 1176 + 0.535714
NA SPA2494 hypothetical proteinchromosome CDS2594806 291 - 0.426117
NA SPA3603 hypothetical proteinchromosome CDS3736825 345 - 0.394203
NA SPA4099 cytochrome c-type biogenesis proteinchromosome CDS4273469 510 + 0.554902
NA SPA2321 probable peroxidasechromosome CDS2414372 603 + 0.532338
NA SPA3910 hypothetical proteinchromosome CDS4055957 1041 + 0.564842
NA SPA2384 probable secreted proteinchromosome CDS2485824 399 - 0.360902
NA SPA4127 hypothetical proteinchromosome CDS4308382 1401 - 0.524625
NA SPA1217 putative thiol peroxidasechromosome CDS1286521 558 + 0.439068
NA SPA0666 hypothetical proteinchromosome CDS750073 246 - 0.402439
NA SPA4310 hypothetical proteinchromosome CDS4479168 666 + 0.564565
NA SPA3062 putative disulfide oxidoreductasechromosome CDS3167464 678 + 0.50885
aat SPA1843 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS1920954 705 + 0.567376
ahpC SPA2126 alkyl hydroperoxide reductase c22 proteinchromosome CDS2211480 564 - 0.501773
ahpF SPA2125 alkyl hydroperoxide reductase F52A protein (subunit F)chromosome CDS2209673 1566 - 0.551086
bcfH SPA0028 hypothetical proteinchromosome CDS31267 846 + 0.544917
bcp SPA0378 bacterioferritin comigratory proteinchromosome CDS444656 471 - 0.47983
btuE SPA1502 putative glutathione peroxidase/vitamin B12 transport periplasmic protein BtuEchromosome CDS1577646 552 - 0.494565
cbpA SPA1738 curved DNA-binding proteinchromosome CDS1798405 921 + 0.533116
ccmA SPA3669 heme exporter protein A1chromosome CDS3806036 618 - 0.728155
ccmA SPA0610 heme exporter protein A1chromosome CDS691606 618 + 0.728155
ccmB SPA0611 heme exporter protein B1chromosome CDS692223 657 + 0.701674
ccmB SPA3668 heme exporter protein B1chromosome CDS3805380 660 - 0.701515
ccmC SPA0612 heme exporter protein C1chromosome CDS692931 738 + 0.651762
ccmC SPA3667 heme exporter protein C1chromosome CDS3804591 738 - 0.651762
ccmE SPA0614 cytochrome c-type biogenesis protein E1chromosome CDS693874 480 + 0.658333
ccmE SPA3665 cytochrome c-type biogenesis protein E1chromosome CDS3803906 480 - 0.658333
ccmF SPA3664 cytochrome c-type biogenesis protein F1chromosome CDS3801978 1932 - 0.681159
ccmF SPA0615 cytochrome c-type biogenesis protein F1chromosome CDS694350 1932 + 0.681159
ccmG SPA3663 heme lyase/disulfide oxidoreductase, cytochrome c-type biogenesischromosome CDS3801424 558 - 0.61828
ccmH SPA0617 cytochrome c-type biogenesis protein H1chromosome CDS696832 1044 + 0.679119
clpA SPA1854 ATP-dependent Clp protease ATP-binding subunit ClpAchromosome CDS1928696 2277 - 0.541063
clpB SPA2521 ClpB protein (heat shock protein f84.1)chromosome CDS2619961 2574 - 0.533023
clpP SPA2274 ATP-dependent Clp protease proteolytic subunitchromosome CDS2369275 624 - 0.512821
clpX SPA2273 ATP-dependent protease ATP-binding subunitchromosome CDS2367752 1272 - 0.529088
csgB SPA1708 nucleation component of curlin monomerschromosome CDS1767288 456 - 0.434211
cydC SPA1842 transport ATP-binding protein CydCchromosome CDS1919188 1722 + 0.571429
cydD SPA1841 transport ATP-binding protein CydDchromosome CDS1917490 1698 + 0.570671
cyoE SPA2283 protoheme IX farnesyltransferasechromosome CDS2378864 891 + 0.530864
cysU SPA0423 sulphate transport system permease protein CysTchromosome CDS492720 834 + 0.557554
degQ SPA3215 serine proteasechromosome CDS3321975 1368 + 0.539474
degS SPA3216 serine proteasechromosome CDS3323435 1071 + 0.545285
djlA SPA0095 Dna-J like membrane chaperone proteinchromosome CDS108314 813 + 0.538745
dnaJ SPA0013 DnaJ proteinchromosome CDS13596 1128 + 0.536348
dnaK SPA0012 molecular chaperone DnaKchromosome CDS11594 1917 + 0.527908
dsbA SPA3838 thiol:disulfide interchange proteinchromosome CDS3982278 624 + 0.5
dsbB SPA1066 disulfide bond formation protein Bchromosome CDS1133093 531 - 0.548023
dsbC SPA2911 thiol:disulfide interchange proteinchromosome CDS3021308 714 - 0.502801
dsbD SPA4139 thiol:disulfide interchange protein precursorchromosome CDS4317121 1704 - 0.571009
dsbE SPA0616 thiol:disulfide interchange proteinchromosome CDS696278 558 + 0.61828
dsbG SPA2127 thiol:disulfide interchange protein DsbG precursorchromosome CDS2212484 747 + 0.500669
fdhE SPA3876 formate dehydrogenase accessory protein FdhEchromosome CDS4020327 930 - 0.57957
fklB SPA4214 probable FkbP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4382920 663 + 0.559578
fkpA SPA3319 FKBP-type peptidyl-prolyl isomerasechromosome CDS3411258 819 - 0.507937
fkpB SPA0049 probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerasechromosome CDS57310 450 + 0.546667
flgA SPA1678 flagellar basal body P-ring biosynthesis proteinchromosome CDS1740785 660 + 0.578788
flgJ SPA1669 flagellar biosynthesis proteinchromosome CDS1733472 951 - 0.564669
flgN SPA1680 flagella synthesis protein FlgNchromosome CDS1741834 423 + 0.541371
fliJ SPA0897 flagellar proteinchromosome CDS977201 444 - 0.513514
fliS SPA0909 flagellar protein FliSchromosome CDS987705 408 - 0.5
ftsH SPA3163 cell division proteinchromosome CDS3272157 1935 - 0.559173
gcp SPA3076 possible glycoproteasechromosome CDS3183272 1014 - 0.580868
glnD SPA0220 PII uridylyl-transferasechromosome CDS254415 2673 - 0.562664
glnE SPA3069 adenyl-transferasechromosome CDS3174499 2844 - 0.573488
gp1 SPA2394 portal proteinchromosome CDS2502197 2004 - 0.500499
groEL SPA4147 chaperonin GroELchromosome CDS4324850 1647 + 0.545234
groES SPA4146 co-chaperonin GroESchromosome CDS4324513 294 + 0.472789
grpE SPA2540 heat shock protein GrpE (heat shock protein b25.3) (hsp24)chromosome CDS2639385 591 - 0.522843
grxA SPA1890 glutaredoxin 1chromosome CDS1965623 264 + 0.431818
grxB SPA1686 glutaredoxin 2chromosome CDS1747878 648 + 0.467593
grxC SPA3554 glutaredoxin 3chromosome CDS3684493 252 - 0.511905
gst SPA1402 glutathione S-transferasechromosome CDS1485952 606 + 0.513201
hflC SPA4181 HflC proteinchromosome CDS4357543 1005 + 0.541294
hflK SPA4180 HflK proteinchromosome CDS4356281 1260 + 0.568254
hopD SPA3308 Type III leader peptidasechromosome CDS3403297 468 + 0.525641
hscA SPA0327 chaperone protein HscAchromosome CDS366637 1851 + 0.592112
hscB SPA0326 co-chaperone HscBchromosome CDS366109 516 + 0.544574
hslJ SPA1238 heat shock proteinchromosome CDS1307682 411 - 0.520681
hslO SPA3363 Hsp33-like chaperoninchromosome CDS3459199 879 + 0.549488
hslS SPA3658 heat shock protein Bchromosome CDS3797536 429 - 0.519814
hslT SPA3659 heat shock protein Achromosome CDS3798074 414 - 0.502415
hslU SPA3934 ATP-dependent protease ATP-binding subunitchromosome CDS4077198 1332 - 0.532282
hslV SPA3935 ATP-dependent protease peptidase subunitchromosome CDS4078539 531 - 0.544256
htpG SPA2235 heat shock protein 90chromosome CDS2327671 1899 - 0.530279
htpX SPA1029 heat shock protein HtpXchromosome CDS1101192 882 + 0.526077
htrA SPA0215 protease DO precursor; heat shock protein HtrAchromosome CDS248764 1428 + 0.545518
hyaE SPA1083 hydrogenase-1 operon protein HyaEchromosome CDS1152663 405 - 0.577778
hyaE2 SPA1322 hydrogenase-1 operon protein HyaE2chromosome CDS1406522 411 + 0.525547
hybG SPA3011 hydrogenase-2 component proteinchromosome CDS3116024 249 - 0.526104
hypB SPA2713 hydrogenase isoenzyme formation protein HypBchromosome CDS2815646 873 + 0.579611
hypC SPA2714 hydrogenase isoenzyme formation protein HypCchromosome CDS2816509 273 + 0.553114
hypD SPA2715 hydrogenase isoenzyme formation protein HypDchromosome CDS2816781 1122 + 0.581996
hypE SPA2716 hydrogenase isoenzyme formation protein HypEchromosome CDS2817941 969 + 0.591331
hypf SPA2700 hydrogenase maturation proteinchromosome CDS2803159 2241 - 0.603748
lon SPA2272 Lon proteasechromosome CDS2365212 2355 - 0.539703
lonH SPA1782 hypothetical proteinchromosome CDS1838068 1761 + 0.53833
lpxO SPA4104 putative membrane-bound beta-hydroxylasechromosome CDS4279786 909 - 0.508251
msrA SPA4228 methionine sulfoxide reductase Achromosome CDS4397781 639 - 0.552426
ninX SPA2404 hypothetical proteinchromosome CDS2511520 342 - 0.412281
nrdG SPA4251 anaerobic ribonucleoside-triphosphate reductase activating proteinchromosome CDS4421945 465 - 0.55914
nrdH SPA2663 putative glutaredoxinchromosome CDS2767684 246 + 0.556911
nrfE SPA4098 cytochrome c-type biogenesis proteinchromosome CDS4271740 1737 + 0.595279
nrfG SPA4100 NrfG proteinchromosome CDS4273975 621 + 0.566828
osmC SPA1305 osmotically inducible protein Cchromosome CDS1385556 432 + 0.511574
pcm SPA2782 protein-L-isoaspartate O-methyltransferasechromosome CDS2880816 627 - 0.569378
pflA SPA1828 pyruvate formate-lyase 1 activating enzymechromosome CDS1899005 798 + 0.488722
phnU SPA2296 probable membrane component of 2-aminoethylphosphonate transporterchromosome CDS2392030 870 + 0.572414
ppiA SPA3338 peptidyl-prolyl cis-trans isomerasechromosome CDS3427612 573 - 0.507853
ppiB SPA2187 peptidyl-prolyl cis-trans isomerase Bchromosome CDS2274390 495 + 0.49697
ppiC SPA3749 peptidyl-prolyl cis-trans isomerase Cchromosome CDS3894591 282 - 0.457447
ppiD SPA2270 peptidyl-prolyl cis-trans isomerase Dchromosome CDS2362569 1872 - 0.523504
prgI SPA2731 pathogenicity 1 island effector proteinchromosome CDS2830621 243 - 0.45679
ptr SPA2860 protease III precursor (pitrilysin)chromosome CDS2967278 2889 - 0.519211
radA SPA4389 putative DNA repair proteinchromosome CDS4562078 1383 + 0.597975
rpsV SPA1303 30S ribosomal protein S22chromosome CDS1384591 144 - 0.493056
scsC SPA1735 secreted protein, suppressor for copper-sensitivity C precursorchromosome CDS1795252 624 - 0.525641
scsD SPA1734 secreted protein, suppressor for copper-sensitivity Dchromosome CDS1794756 507 - 0.619329
slyD SPA3321 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS3412704 591 - 0.558376
smpB SPA2547 SsrA-binding proteinchromosome CDS2644281 483 + 0.494824
sohB SPA1160 putative proteasechromosome CDS1228210 1047 + 0.536772
sppA SPA1549 protease IVchromosome CDS1624074 1857 + 0.557351
sspA SPA3210 stringent starvation protein Achromosome CDS3318015 639 - 0.521127
sufB SPA1484 hypothetical proteinchromosome CDS1558431 1488 - 0.521505
sufC SPA1483 putative ABC transport ATP-binding subunitchromosome CDS1557668 747 - 0.53012
surA SPA0093 survival protein SurA precursorchromosome CDS104366 1287 - 0.544678
tig SPA2275 trigger factorchromosome CDS2370145 1299 - 0.525019
tpx SPA1202 thiol peroxidasechromosome CDS1270682 507 - 0.502959
trxA SPA3756 thioredoxinchromosome CDS3902393 330 + 0.490909
trxB SPA1840 thioredoxin reductasechromosome CDS1916339 969 + 0.550052
ybbJ SPA2222 hypothetical proteinchromosome CDS2311640 453 + 0.598234
ybbN SPA2218 thioredoxin-like proteinchromosome CDS2308376 855 + 0.554386
ybeL SPA2081 hypothetical proteinchromosome CDS2165425 474 - 0.556962
ybiY SPA1911 putative pyruvate formate-lyase 3 activating enzymechromosome CDS1988366 900 + 0.554444
ycaL SPA1819 putative lipoproteinchromosome CDS1887669 762 - 0.511811
ydcP SPA1264 putative peptidasechromosome CDS1334637 1965 + 0.526718
ydhD SPA1420 hypothetical proteinchromosome CDS1500673 348 - 0.505747
ydhH SPA1407 hypothetical proteinchromosome CDS1490069 1122 - 0.578431
yeaA SPA1553 methionine sulfoxide reductase Bchromosome CDS1628396 429 - 0.515152
yeaZ SPA1053 hypothetical proteinchromosome CDS1123676 696 + 0.603448
yedF SPA0904 hypothetical proteinchromosome CDS983719 234 - 0.491453
yegD SPA0741 hypothetical proteinchromosome CDS824923 1353 - 0.596452
yegQ SPA0716 putative proteasechromosome CDS799128 1362 - 0.54699
yegU SPA0709 putative hydrolasechromosome CDS792543 1005 - 0.58209
yfcF SPA0516 putative glutathione-S transferasechromosome CDS587639 645 + 0.565891
yfcG SPA0515 putative glutathione-S transferasechromosome CDS586849 648 - 0.530864
yfiG SPA0268 thioredoxin 2chromosome CDS306079 420 - 0.533333
ygcF SPA2807 hypothetical proteinchromosome CDS2906961 672 - 0.516369
yggG SPA2948 hypothetical proteinchromosome CDS3056278 759 + 0.552042
yggX SPA2974 hypothetical proteinchromosome CDS3079124 276 + 0.474638
yghU SPA3008 possible transferasechromosome CDS3113252 867 + 0.546713
yhbU SPA3143 putative proteasechromosome CDS3250385 996 + 0.590361
yhbV SPA3144 hypothetical proteinchromosome CDS3251389 879 + 0.566553
yhfA SPA3331 hypothetical proteinchromosome CDS3421323 405 - 0.530864
yhgI SPA3376 hypothetical proteinchromosome CDS3475164 576 + 0.538194
yhhP SPA3429 hypothetical proteinchromosome CDS3537335 246 - 0.54065
yibF SPA3535 putative glutathione transferasechromosome CDS3662190 609 - 0.55665
yifB SPA3738 putative magnesium chelatase, subunit ChlIchromosome CDS3882598 1437 - 0.5254
yjjW SPA4379 hypothetical proteinchromosome CDS4551355 864 - 0.561343
yliJ SPA1900 glutathione s-transferase family proteinchromosome CDS1975707 627 + 0.550239
yqjG SPA3102 hypothetical proteinchromosome CDS3208952 987 + 0.522796
yqjI SPA3083 hypothetical proteinchromosome CDS3190619 645 + 0.536434