Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome
Number of genes found: 153
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECA1220 | putative thioredoxin | chromosome | CDS | 1389664 | 861 | - | 0.547038 |
NA | ECA0975 | hypothetical protein | chromosome | CDS | 1085686 | 273 | - | 0.483516 |
NA | ECA3377 | glutaredoxin | chromosome | CDS | 3794082 | 636 | + | 0.506289 |
NA | ECA3192 | hypothetical protein | chromosome | CDS | 3571960 | 960 | + | 0.528125 |
NA | ECA2135 | periplasmic pectate lyase | chromosome | CDS | 2434874 | 1707 | - | 0.521968 |
NA | ECA1117 | probable peroxidase | chromosome | CDS | 1269999 | 603 | - | 0.524046 |
NA | ECA0376 | hypothetical protein | chromosome | CDS | 427331 | 738 | - | 0.533875 |
NA | ECA2791 | putative glutathione S-transferase | chromosome | CDS | 3132533 | 687 | + | 0.544396 |
NA | ECA1072 | glutathione S-transferase | chromosome | CDS | 1201077 | 630 | - | 0.438095 |
NA | ECA4134 | hypothetical protein | chromosome | CDS | 4614245 | 576 | + | 0.526042 |
NA | ECA1820 | hypothetical protein | chromosome | CDS | 2065357 | 1371 | - | 0.54267 |
NA | ECA0832 | putative phage capsid protein (partial) | chromosome | CDS | 922240 | 327 | + | 0.495413 |
NA | ECA1267 | thioredoxin | chromosome | CDS | 1440451 | 1266 | - | 0.548183 |
NA | ECA2312 | hypothetical protein | chromosome | CDS | 2617692 | 1143 | + | 0.503062 |
NA | ECA3915 | putative peptidase | chromosome | CDS | 4383748 | 753 | + | 0.512616 |
NA | ECA0762 | putative lipoprotein | chromosome | CDS | 834358 | 324 | - | 0.515432 |
NA | ECA0722 | putative protease | chromosome | CDS | 791463 | 996 | - | 0.560241 |
NA | ECA1196 | hypothetical protein | chromosome | CDS | 1357212 | 915 | - | 0.525683 |
NA | ECA1570 | putative glutathione S-transferase | chromosome | CDS | 1826507 | 840 | - | 0.567857 |
NA | ECA1927 | hypothetical protein | chromosome | CDS | 2186467 | 351 | + | 0.478632 |
NA | ECA2975 | hypothetical protein | chromosome | CDS | 3325954 | 651 | - | 0.447005 |
NA | ECA3554 | hypothetical protein | chromosome | CDS | 3985365 | 672 | - | 0.563988 |
NA | ECA2626 | putative phage-related protein | chromosome | CDS | 2958118 | 327 | - | 0.461774 |
NA | ECA0388 | putative peptidase | chromosome | CDS | 438255 | 1038 | + | 0.529865 |
NA | ECA2374 | hypothetical protein | chromosome | CDS | 2684682 | 702 | - | 0.574074 |
NA | ECA1450 | putative protease | chromosome | CDS | 1645215 | 1620 | + | 0.543827 |
NA | ECA1555 | hypothetical protein | chromosome | CDS | 1810590 | 1794 | - | 0.571349 |
NA | ECA2926 | putative glutathione-S-transferase (partial) | chromosome | CDS | 3269020 | 126 | + | 0.507937 |
NA | ECA0554 | hypothetical protein | chromosome | CDS | 622423 | 876 | + | 0.477169 |
NA | ECA3850 | hypothetical protein | chromosome | CDS | 4304195 | 771 | - | 0.555123 |
NA | ECA1195 | hypothetical protein | chromosome | CDS | 1356757 | 456 | - | 0.572368 |
NA | ECA2649 | thioredoxin reductase | chromosome | CDS | 2982496 | 960 | + | 0.519792 |
NA | ECA0721 | hypothetical protein | chromosome | CDS | 790573 | 879 | - | 0.536974 |
NA | ECA3193 | putative protease | chromosome | CDS | 3573115 | 1365 | + | 0.542857 |
NA | ECA1516 | putative lipoprotein | chromosome | CDS | 1764218 | 498 | + | 0.556225 |
NA | ECA1587 | probable glutathione-S-transferase | chromosome | CDS | 1840982 | 693 | + | 0.536797 |
NA | ECA3656 | hypothetical protein | chromosome | CDS | 4105353 | 657 | + | 0.578387 |
NA | ECA2690 | putative glutathione S-transferase | chromosome | CDS | 3025403 | 618 | + | 0.535599 |
NA | ECA2716 | putative glutathione S transferase | chromosome | CDS | 3052224 | 645 | + | 0.497674 |
NA | ECA3044 | putative glutathione-S transferase | chromosome | CDS | 3401812 | 627 | + | 0.5311 |
NA | ECA3436 | putative chaperone | chromosome | CDS | 3852301 | 2598 | - | 0.561586 |
NA | ECA4063 | hypothetical protein | chromosome | CDS | 4528356 | 408 | - | 0.509804 |
NA | ECA4230 | probable magnesium-chelatase | chromosome | CDS | 4733613 | 1527 | + | 0.525868 |
NA | ECA0787 | hypothetical protein | chromosome | CDS | 861360 | 552 | + | 0.539855 |
NA | ECA2037 | OsmC-like protein | chromosome | CDS | 2318802 | 477 | + | 0.545073 |
NA | ECA1933 | hypothetical protein | chromosome | CDS | 2190305 | 1113 | + | 0.580413 |
NA | ECA4212 | thioredoxin | chromosome | CDS | 4709153 | 327 | - | 0.470948 |
NA | ECA3769 | putative pyruvate formate-lyase activating enzyme | chromosome | CDS | 4211839 | 951 | + | 0.498423 |
NA | ECA0635 | hypothetical protein | chromosome | CDS | 707778 | 996 | - | 0.518072 |
NA | ECA1749 | hypothetical protein | chromosome | CDS | 1998033 | 1728 | - | 0.518519 |
aat | ECA2652 | leucyl/phenylalanyl-tRNA--protein transferase | chromosome | CDS | 2987214 | 714 | + | 0.509804 |
ahpC | ECA3942 | alkyl hydroperoxide reductase C22 protein | chromosome | CDS | 4413135 | 564 | - | 0.496454 |
ahpF | ECA3941 | alkyl hydroperoxide reductase subunit F | chromosome | CDS | 4411424 | 1581 | - | 0.515496 |
bcp | ECA1260 | bacterioferritin comigratory protein | chromosome | CDS | 1433409 | 468 | - | 0.444444 |
btuE | ECA1833 | putative vitamin B12 transport periplasmic protein | chromosome | CDS | 2079241 | 552 | + | 0.494565 |
ccmA | ECA1882 | heme exporter protein A | chromosome | CDS | 2138606 | 621 | + | 0.587762 |
ccmB | ECA1883 | heme exporter protein B | chromosome | CDS | 2139226 | 657 | + | 0.598173 |
ccmC | ECA1884 | heme exporter protein C | chromosome | CDS | 2139951 | 741 | + | 0.556005 |
ccmE | ECA1886 | cytochrome C-type biogenesis protein | chromosome | CDS | 2140906 | 483 | + | 0.561077 |
ccmF | ECA1887 | cytochrome C-type biogenesis protein | chromosome | CDS | 2141385 | 1956 | + | 0.576687 |
ccmH1 | ECA1889 | cytochrome C-type biogenesis protein | chromosome | CDS | 2143891 | 459 | + | 0.511983 |
ccmH2 | ECA1890 | cytochrome C-type biogenesis protein | chromosome | CDS | 2144346 | 870 | + | 0.550575 |
clpA | ECA2656 | ATP-dependent CLP protease ATP-binding subunit | chromosome | CDS | 2990582 | 2274 | - | 0.529464 |
clpB | ECA3345 | ClpB protein (heat shock protein f84.1) | chromosome | CDS | 3760023 | 2577 | - | 0.496314 |
clpP | ECA1148 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 1301367 | 624 | + | 0.472756 |
clpX | ECA1149 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 1302154 | 1275 | + | 0.509804 |
cydC | ECA2651 | ABC transporter ATP-binding protein | chromosome | CDS | 2985450 | 1740 | + | 0.547126 |
cydD | ECA2650 | ABC transporter ATP-binding protein | chromosome | CDS | 2983684 | 1767 | + | 0.539898 |
cyoE | ECA1139 | protoheme IX farnesyltransferase | chromosome | CDS | 1291267 | 891 | - | 0.499439 |
cysT | ECA0884 | sulphate transport system permease protein | chromosome | CDS | 985221 | 855 | + | 0.547368 |
cysU | ECA3298 | sulfate ABC transporter permease protein | chromosome | CDS | 3704801 | 813 | - | 0.522755 |
degP | ECA3301 | protease Do | chromosome | CDS | 3708493 | 1467 | - | 0.539877 |
degQ | ECA0303 | exported protease | chromosome | CDS | 348586 | 1371 | - | 0.531729 |
degS | ECA0302 | exported protease | chromosome | CDS | 347351 | 1098 | - | 0.509107 |
djlA | ECA3855 | Dna-J like membrane chaperone protein | chromosome | CDS | 4313211 | 876 | - | 0.526256 |
dnaJ | ECA3881 | chaperone protein DnaJ | chromosome | CDS | 4342359 | 1140 | - | 0.549123 |
dnaK | ECA3882 | molecular chaperone DnaK | chromosome | CDS | 4343607 | 1908 | - | 0.506813 |
dsbA | ECA0020 | thiol:disulfide interchange protein | chromosome | CDS | 24825 | 624 | + | 0.450321 |
dsbB | ECA2362 | disulfide bond formation protein B | chromosome | CDS | 2674846 | 531 | + | 0.504708 |
dsbC | ECA0771 | thiol:disulfide interchange protein | chromosome | CDS | 840892 | 717 | + | 0.523013 |
dsbD | ECA0618 | thiol:disulfide interchange protein precursor | chromosome | CDS | 690918 | 1734 | - | 0.563437 |
dsbE | ECA1888 | thiol:disulfide interchange protein | chromosome | CDS | 2143337 | 558 | + | 0.546595 |
dsbG | ECA0066 | thiol:disulfide interchange protein | chromosome | CDS | 80829 | 756 | - | 0.533069 |
fdhE | ECA3002 | formate dehydrogenase accessory protein FdhE | chromosome | CDS | 3355865 | 930 | - | 0.54086 |
fklB | ECA3607 | FkbP-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4057307 | 621 | - | 0.542673 |
fkpA | ECA4049 | FkbP-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4516657 | 819 | - | 0.484737 |
fkpB | ECA3874 | FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4334383 | 474 | - | 0.550633 |
flgA | ECA1701 | flagellar basal body P-ring biosynthesis protein | chromosome | CDS | 1950142 | 669 | - | 0.490284 |
flgJ | ECA1710 | flagellar biosynthesis protein | chromosome | CDS | 1957413 | 963 | + | 0.49325 |
flgN | ECA1699 | flagella synthesis protein | chromosome | CDS | 1949261 | 438 | - | 0.456621 |
fliJ | ECA1722 | flagellar protein | chromosome | CDS | 1967157 | 447 | - | 0.46085 |
fliS | ECA1729 | flagellar protein FliS | chromosome | CDS | 1973615 | 411 | - | 0.486618 |
gcp | ECA0683 | O-sialoglycoprotein endopeptidase | chromosome | CDS | 755628 | 1014 | + | 0.560158 |
glnD | ECA1029 | PII uridylyl-transferase | chromosome | CDS | 1150431 | 2715 | - | 0.55175 |
glnE | ECA3585 | glutamate-ammonia-ligase adenylyltransferase | chromosome | CDS | 4029078 | 2856 | - | 0.55077 |
groEL | ECA0625 | chaperonin GroEL | chromosome | CDS | 697515 | 1650 | + | 0.515152 |
groES | ECA0624 | co-chaperonin GroES | chromosome | CDS | 697176 | 294 | + | 0.472789 |
grpE | ECA0842 | heat shock protein | chromosome | CDS | 932209 | 588 | + | 0.520408 |
grxA | ECA2681 | glutaredoxin 1 | chromosome | CDS | 3016496 | 267 | + | 0.483146 |
grxB | ECA2526 | glutaredoxin 2 | chromosome | CDS | 2842935 | 648 | + | 0.503086 |
gst | ECA1938 | glutathione S-transferase | chromosome | CDS | 2195117 | 609 | - | 0.474548 |
hflB | ECA0698 | cell division protein | chromosome | CDS | 768185 | 1938 | + | 0.508772 |
hflC | ECA3931 | putative phage-related protein | chromosome | CDS | 4398820 | 996 | - | 0.51004 |
hflK | ECA3932 | putative phage-related protein | chromosome | CDS | 4399819 | 1254 | - | 0.5311 |
hscA | ECA3233 | chaperone protein HscA | chromosome | CDS | 3616632 | 1851 | - | 0.56564 |
hscB | ECA3234 | co-chaperone HscB | chromosome | CDS | 3618557 | 519 | - | 0.526012 |
hslO | ECA4105 | Hsp33-like chaperonin | chromosome | CDS | 4574406 | 870 | + | 0.527586 |
hslU | ECA4262 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 4776424 | 1332 | + | 0.529279 |
hslV | ECA4261 | ATP-dependent protease peptidase subunit | chromosome | CDS | 4775884 | 531 | + | 0.544256 |
htpG | ECA1179 | heat shock protein 90 | chromosome | CDS | 1333507 | 1890 | + | 0.503175 |
htpX | ECA2427 | heat shock protein HtpX | chromosome | CDS | 2740491 | 882 | - | 0.515873 |
hypB | ECA1234 | hydrogenase isoenzyme nickel incorporation protein | chromosome | CDS | 1404189 | 876 | - | 0.528539 |
hypC | ECA1233 | hydrogenase isoenzyme formation protein | chromosome | CDS | 1403920 | 279 | - | 0.519713 |
hypD | ECA1232 | hydrogenase isoenzyme formation protein | chromosome | CDS | 1402802 | 1119 | - | 0.532618 |
hypE | ECA1231 | hydrogenase isoenzyme formation protein | chromosome | CDS | 1401792 | 1011 | - | 0.551929 |
hypF | ECA1251 | hydrogenase maturation protein | chromosome | CDS | 1422749 | 2304 | + | 0.579427 |
ibpA | ECA4403 | heat shock protein A | chromosome | CDS | 4942274 | 414 | - | 0.521739 |
ibpB | ECA4402 | heat shock protein B | chromosome | CDS | 4941693 | 453 | - | 0.532009 |
lon | ECA1150 | ATP-dependent protease la | chromosome | CDS | 1303620 | 2382 | + | 0.510076 |
msrA | ECA3597 | methionine sulfoxide reductase A | chromosome | CDS | 4046883 | 639 | + | 0.568075 |
msrB | ECA2343 | methionine sulfoxide reductase B | chromosome | CDS | 2653967 | 420 | - | 0.535714 |
nifM | ECA2941 | nitrogen fixation protein | chromosome | CDS | 3286909 | 798 | - | 0.567669 |
nifU | ECA2946 | nitrogen fixation protein | chromosome | CDS | 3290800 | 840 | - | 0.567857 |
nrdG | ECA0374 | anaerobic ribonucleoside-triphosphate reductase activating protein | chromosome | CDS | 424243 | 465 | - | 0.546237 |
nrdH | ECA3335 | putative glutaredoxin | chromosome | CDS | 3744803 | 240 | + | 0.483333 |
nrfE | ECA1879 | cytochrome C-type biogenesis protein | chromosome | CDS | 2135317 | 1878 | + | 0.562833 |
nrfF | ECA1880 | formate-dependent nitrite reductase complex subunit | chromosome | CDS | 2137187 | 402 | + | 0.542289 |
nrfG | ECA1881 | formate-dependent nitrite reductase complex subunit | chromosome | CDS | 2137585 | 831 | + | 0.559567 |
ohr | ECA3167 | organic hydroperoxide resistance protein | chromosome | CDS | 3536586 | 426 | - | 0.514085 |
osmC | ECA2221 | osmotically inducible protein C | chromosome | CDS | 2524682 | 429 | + | 0.51049 |
outO | ECA3098 | type 4 prepilin-like proteins leader peptide processing enzyme | chromosome | CDS | 3458845 | 849 | - | 0.551237 |
pcm | ECA3532 | protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 3960622 | 627 | - | 0.523126 |
pcp | ECA1354 | pyrrolidone-carboxylate peptidase | chromosome | CDS | 1533499 | 648 | + | 0.54784 |
pilU | ECA0543 | putative prepilin peptidase | chromosome | CDS | 613398 | 660 | + | 0.530303 |
ppiA | ECA4071 | peptidyl-prolyl cis-trans isomerase A | chromosome | CDS | 4538833 | 570 | - | 0.503509 |
ppiB | ECA3154 | peptidyl-prolyl cis-trans isomerase B | chromosome | CDS | 3520193 | 495 | + | 0.486869 |
ppiC | ECA4216 | peptidyl-prolyl cis-trans isomerase C | chromosome | CDS | 4714592 | 282 | + | 0.482269 |
ppiD | ECA1152 | peptidyl-prolyl cis-trans isomerase D | chromosome | CDS | 1306869 | 1881 | + | 0.492291 |
ptrA | ECA0994 | protease III precursor | chromosome | CDS | 1106941 | 2949 | + | 0.527976 |
radA | ECA0464 | putative DNA repair protein | chromosome | CDS | 528905 | 1383 | - | 0.571222 |
sirA | ECA4353 | hypothetical protein | chromosome | CDS | 4874828 | 246 | - | 0.536585 |
slyD | ECA4054 | FkbP-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4519847 | 585 | - | 0.538462 |
smpB | ECA0836 | SsrA-binding protein | chromosome | CDS | 927358 | 483 | - | 0.505176 |
sohB | ECA2288 | protease | chromosome | CDS | 2593787 | 1053 | - | 0.519468 |
sppA | ECA2339 | protease IV | chromosome | CDS | 2649493 | 1851 | + | 0.517018 |
sspA | ECA0308 | stringent starvation protein A | chromosome | CDS | 353367 | 642 | + | 0.515576 |
sufB | ECA1860 | hypothetical protein | chromosome | CDS | 2112831 | 1500 | + | 0.530667 |
sufC | ECA1861 | probable ABC transporter ATP-dependent protein | chromosome | CDS | 2114428 | 747 | + | 0.507363 |
sufD | ECA1862 | hypothetical protein | chromosome | CDS | 2115176 | 1320 | + | 0.559091 |
surA | ECA3857 | survival protein | chromosome | CDS | 4316738 | 1296 | + | 0.506944 |
tig | ECA1147 | trigger factor | chromosome | CDS | 1299536 | 1305 | + | 0.495785 |
tpx | ECA1990 | thiol peroxidase | chromosome | CDS | 2258122 | 504 | - | 0.503968 |
trxC | ECA3517 | thioredoxin 2 | chromosome | CDS | 3938346 | 420 | + | 0.516667 |