Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome
Number of genes found: 172
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli O157:H7 EDL933, EDL933 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Z1426 | unknown protein encoded by bacteriophage BP-933W | chromosome | CDS | 1332590 | 312 | - | 0.432692 |
NA | Z2265 | putative transferase | chromosome | CDS | 2045844 | 618 | - | 0.472492 |
NA | Z4042 | hypothetical protein | chromosome | CDS | 3647865 | 135 | - | 0.451852 |
NA | Z2654 | hypothetical protein | chromosome | CDS | 2393413 | 1110 | - | 0.54955 |
NA | Z2361 | putative capsid assembly protein of prophage CP-933R | chromosome | CDS | 2132439 | 1506 | - | 0.604914 |
NA | Z1495 | unknown protein encoded by bacteriophage BP-933W | chromosome | CDS | 1379853 | 8421 | + | 0.542572 |
NA | Z2372 | unknown protein encoded within prophage CP-933R | chromosome | CDS | 2141118 | 372 | - | 0.47043 |
NA | Z2134 | putative head-tail preconnector protein of prophage CP-933O | chromosome | CDS | 1912872 | 1506 | + | 0.604914 |
NA | Z2542 | hypothetical protein | chromosome | CDS | 2259827 | 1584 | - | 0.469066 |
NA | Z1886 | putative capsid protein of prophage CP-933X | chromosome | CDS | 1718285 | 1320 | + | 0.607576 |
NA | Z2979 | putative stability/partitioning protein encoded within prophage CP-933T | chromosome | CDS | 2677512 | 960 | + | 0.547917 |
NA | Z3391 | putative glutathione-S-transferase | chromosome | CDS | 3031951 | 648 | - | 0.541667 |
NA | Z2112 | putative ClpP-like protease encoded within prophage CP-933O | chromosome | CDS | 1897625 | 798 | - | 0.526316 |
NA | Z3932 | putative antiterminator of prophage CP-933Y | chromosome | CDS | 3555085 | 624 | - | 0.508013 |
NA | Z3262 | hypothetical protein | chromosome | CDS | 2923847 | 1005 | + | 0.556219 |
NA | Z4343 | hypothetical protein | chromosome | CDS | 3946346 | 915 | + | 0.539891 |
NA | Z1305 | putative ATP-dependent protease | chromosome | CDS | 1235233 | 1761 | - | 0.519591 |
NA | Z0967 | putative protease encoded in prophage CP-933K | chromosome | CDS | 909701 | 2028 | + | 0.5143 |
NA | Z2086 | similar to division inhibition protein DicB within CP-933O | chromosome | CDS | 1880857 | 294 | - | 0.411565 |
NA | Z6052 | unknown protein encoded by cryptic prophage CP-933P | chromosome | CDS | 2311828 | 348 | - | 0.474138 |
NA | Z3097 | putative peptidase encoded within prophage CP-933U | chromosome | CDS | 2762762 | 960 | - | 0.526042 |
NA | Z0254 | putative protease | chromosome | CDS | 251126 | 2772 | - | 0.597763 |
NA | Z2565 | putative chaperone protein | chromosome | CDS | 2274910 | 591 | - | 0.392555 |
NA | Z1345 | antitermination protein Q homolog of cryptic prophage CP-933M | chromosome | CDS | 1265949 | 822 | + | 0.478102 |
aat | Z1229 | leucyl/phenylalanyl-tRNA--protein transferase | chromosome | CDS | 1147028 | 705 | - | 0.53617 |
ahpC | Z0749 | alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides | chromosome | CDS | 720197 | 564 | + | 0.5 |
ahpF | Z0750 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides | chromosome | CDS | 720859 | 1596 | + | 0.525063 |
bcp | Z3739 | bacterioferritin comigratory protein | chromosome | CDS | 3386407 | 471 | + | 0.496815 |
btuE | Z2739 | vitamin B12 transport | chromosome | CDS | 2468473 | 552 | - | 0.490942 |
cbpA | Z1418 | curved DNA-binding protein; functions closely related to DnaJ | chromosome | CDS | 1326027 | 921 | - | 0.53203 |
ccmA | Z3458 | ATP binding protein of heme exporter A | chromosome | CDS | 3101843 | 618 | - | 0.55178 |
ccmB | Z3457 | heme exporter protein B, cytochrome c-type biogenesis protein | chromosome | CDS | 3101184 | 663 | - | 0.553545 |
ccmC | Z3456 | heme exporter protein C | chromosome | CDS | 3100405 | 738 | - | 0.552846 |
ccmE | Z3454 | cytochrome c biogenesis, possible subunit of a heme lyase | chromosome | CDS | 3099723 | 480 | - | 0.539583 |
ccmF | Z3453 | cytochrome c-type biogenesis protein | chromosome | CDS | 3097783 | 1944 | - | 0.570988 |
ccmH | Z3451 | possible subunit of heme lyase | chromosome | CDS | 3096180 | 1053 | - | 0.537512 |
clpA | Z1119 | ATP-binding component of serine protease | chromosome | CDS | 1055999 | 2277 | + | 0.526131 |
clpB | Z3886 | heat shock protein | chromosome | CDS | 3521568 | 2586 | - | 0.514308 |
clpP | Z0542 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 522731 | 624 | + | 0.503205 |
clpX | Z0543 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 523480 | 1275 | + | 0.516863 |
csgA | Z1676 | curlin major subunit, coiled surface structures; cryptic | chromosome | CDS | 1548672 | 459 | + | 0.503268 |
cydC | Z1230 | ATP-binding component of cytochrome-related transport | chromosome | CDS | 1147774 | 1722 | - | 0.538328 |
cydD | Z1231 | ATP-binding component of cytochrome-related transport, Zn sensitive | chromosome | CDS | 1149496 | 1767 | - | 0.532541 |
cyoE | Z0531 | protoheme IX farnesyltransferase | chromosome | CDS | 512870 | 891 | - | 0.535354 |
cysU | Z3689 | sulfate, thiosulfate transport system permease T protein | chromosome | CDS | 3334944 | 834 | - | 0.55036 |
degQ | Z4593 | serine endoprotease | chromosome | CDS | 4183196 | 1368 | + | 0.521199 |
degS | Z4594 | protease | chromosome | CDS | 4184653 | 1068 | + | 0.526217 |
djlA | Z0064 | Dna-J like membrane chaperone protein | chromosome | CDS | 62340 | 816 | + | 0.528186 |
dnaJ | Z0015 | chaperone with DnaK; heat shock protein | chromosome | CDS | 14185 | 1131 | + | 0.55084 |
dnaK | Z0014 | molecular chaperone DnaK | chromosome | CDS | 12180 | 1917 | + | 0.513824 |
dsbA | Z5392 | protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction | chromosome | CDS | 4908134 | 627 | + | 0.478469 |
dsbB | Z1948 | disulfide bond formation protein B | chromosome | CDS | 1765393 | 531 | - | 0.52354 |
dsbC | Z4231 | protein disulfide isomerase II | chromosome | CDS | 3843569 | 711 | - | 0.481013 |
dsbD | Z5741 | thiol:disulfide interchange protein precursor | chromosome | CDS | 5247781 | 1698 | - | 0.542403 |
dsbE | Z3452 | disulfide oxidoreductase (in biogenesis of cytochrome c? | chromosome | CDS | 3097229 | 558 | - | 0.544803 |
dsbG | Z0748 | thiol:disulfide interchange protein | chromosome | CDS | 719079 | 807 | - | 0.462206 |
fdhE | Z5433 | formate dehydrogenase accessory protein FdhE | chromosome | CDS | 4947699 | 930 | - | 0.552688 |
fklB | Z5818 | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 5314236 | 780 | + | 0.525641 |
fkpA | Z4705 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 4263735 | 813 | - | 0.483395 |
flgA | Z1710 | flagellar basal body P-ring biosynthesis protein | chromosome | CDS | 1574434 | 660 | - | 0.522727 |
flgJ | Z1719 | flagellar biosynthesis protein | chromosome | CDS | 1581564 | 942 | + | 0.547771 |
flgN | Z1708 | protein of flagellar biosynthesis | chromosome | CDS | 1573644 | 417 | - | 0.479616 |
fliJ | Z3032 | flagellar protein | chromosome | CDS | 2717704 | 444 | + | 0.529279 |
fliS | Z3015 | flagellar protein FliS | chromosome | CDS | 2703036 | 411 | + | 0.491484 |
glnD | Z0177 | PII uridylyl-transferase | chromosome | CDS | 189465 | 2673 | - | 0.531612 |
glnE | Z4406 | adenylylating enzyme for glutamine synthetase | chromosome | CDS | 4003644 | 2841 | - | 0.560366 |
groEL | Z5748 | chaperonin GroEL | chromosome | CDS | 5255461 | 1647 | + | 0.534305 |
groES | Z5747 | co-chaperonin GroES | chromosome | CDS | 5255124 | 294 | + | 0.489796 |
grpE | Z3907 | phage lambda replication; host DNA synthesis; heat shock protein; protein repair | chromosome | CDS | 3539973 | 594 | - | 0.501683 |
grxA | Z1076 | glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase | chromosome | CDS | 1017442 | 258 | - | 0.457364 |
grxB | Z1701 | glutaredoxin 2 | chromosome | CDS | 1567637 | 648 | - | 0.489198 |
grxC | Z5037 | glutaredoxin 3 | chromosome | CDS | 4600005 | 252 | - | 0.511905 |
gst | Z2647 | glutathionine S-transferase | chromosome | CDS | 2389296 | 606 | + | 0.50165 |
hflB | Z4540 | degrades sigma32, integral membrane peptidase, cell division protein | chromosome | CDS | 4134715 | 1935 | - | 0.536951 |
hflC | Z5782 | protease specific for phage lambda cII repressor | chromosome | CDS | 5287011 | 1005 | + | 0.533333 |
hflK | Z5781 | protease specific for phage lambda cII repressor | chromosome | CDS | 5285749 | 1260 | + | 0.55873 |
hopD | Z4693 | putative leader peptidase | chromosome | CDS | 4255883 | 468 | + | 0.478632 |
hscA | Z3793 | chaperone protein HscA | chromosome | CDS | 3447577 | 1851 | - | 0.576445 |
hscB | Z3794 | co-chaperone HscB | chromosome | CDS | 3449444 | 516 | - | 0.515504 |
hslJ | Z2330 | heat shock protein hslJ | chromosome | CDS | 2109236 | 423 | + | 0.470449 |
hslO | Z4755 | Hsp33-like chaperonin | chromosome | CDS | 4309184 | 885 | + | 0.527684 |
hslU | Z5478 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 4990672 | 1332 | - | 0.524775 |
hslV | Z5479 | ATP-dependent protease peptidase subunit | chromosome | CDS | 4992013 | 531 | - | 0.516008 |
htpG | Z0590 | heat shock protein 90 | chromosome | CDS | 561018 | 1875 | + | 0.526933 |
htpX | Z2876 | heat shock protein HtpX | chromosome | CDS | 2588732 | 882 | - | 0.53288 |
htrA | Z0173 | periplasmic serine protease Do; heat shock protein HtrA | chromosome | CDS | 185084 | 1425 | + | 0.538246 |
hyaE | Z1393 | processing of HyaA and HyaB proteins | chromosome | CDS | 1300291 | 399 | + | 0.556391 |
hybG | Z4344 | hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2 | chromosome | CDS | 3947383 | 249 | - | 0.53012 |
hypB | Z4036 | guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3 | chromosome | CDS | 3641983 | 873 | + | 0.550974 |
hypC | Z4037 | pleiotrophic effects on 3 hydrogenase isozymes | chromosome | CDS | 3642846 | 273 | + | 0.553114 |
hypD | Z4038 | pleiotrophic effects on 3 hydrogenase isozymes | chromosome | CDS | 3643118 | 1122 | + | 0.560606 |
hypE | Z4039 | plays structural role in maturation of all 3 hydrogenase | chromosome | CDS | 3644278 | 969 | + | 0.573787 |
hypF | Z4020 | transcriptional regulatory protein | chromosome | CDS | 3626190 | 2253 | - | 0.575233 |
ibpA | Z5183 | heat shock protein | chromosome | CDS | 4726976 | 414 | - | 0.468599 |
ibpB | Z5182 | heat shock protein | chromosome | CDS | 4726436 | 435 | - | 0.485057 |
lon | Z0545 | DNA-binding, ATP-dependent protease La; heat shock K-protein | chromosome | CDS | 524897 | 2400 | + | 0.519583 |
msrA | Z5830 | methionine sulfoxide reductase A | chromosome | CDS | 5327004 | 639 | - | 0.538341 |
nrdG | Z5847 | anaerobic ribonucleotide reductase activating protein | chromosome | CDS | 5345392 | 465 | - | 0.507527 |
nrdH | Z3975 | glutaredoxin-like protein; hydrogen donor | chromosome | CDS | 3592163 | 246 | + | 0.53252 |
nrfE | Z5673 | formate-dependent nitrite reductase; possible assembly function | chromosome | CDS | 5174646 | 1659 | + | 0.566606 |
nrfF | Z5674 | part of formate-dependent nitrite reductase complex | chromosome | CDS | 5176297 | 384 | + | 0.523438 |
nrfG | Z5675 | part of formate-dependent nitrite reductase complex | chromosome | CDS | 5176677 | 597 | + | 0.520938 |
osmC | Z2228 | osmotically inducible protein | chromosome | CDS | 2010173 | 432 | - | 0.5 |
pcm | Z4051 | protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 3656714 | 627 | - | 0.54067 |
pflA | Z1246 | pyruvate formate lyase activating enzyme 1 | chromosome | CDS | 1169206 | 741 | - | 0.495277 |
pflC | Z5508 | probable pyruvate formate lyase activating enzyme 2 | chromosome | CDS | 5021906 | 879 | + | 0.551763 |
ppiA | Z4724 | peptidyl-prolyl cis-trans isomerase A (rotamase A) | chromosome | CDS | 4278853 | 573 | - | 0.511344 |
ppiB | Z0680 | peptidyl-prolyl cis-trans isomerase B (rotamase B) | chromosome | CDS | 646089 | 495 | - | 0.478788 |
ppiC | Z5286 | peptidyl-prolyl cis-trans isomerase C (rotamase C) | chromosome | CDS | 4821922 | 282 | - | 0.510638 |
ptr | Z4138 | protease III | chromosome | CDS | 3745694 | 2889 | - | 0.507442 |
rpsV | Z2230 | 30S ribosomal subunit protein S22 | chromosome | CDS | 2011267 | 138 | + | 0.449275 |
sepQ | Z5116 | sepQ | chromosome | CDS | 4673008 | 918 | - | 0.374728 |
slpA | Z0033 | probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase) | chromosome | CDS | 30201 | 450 | + | 0.553333 |
slyD | Z4707 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 4265035 | 591 | - | 0.554992 |
smpB | Z3913 | SsrA-binding protein | chromosome | CDS | 3544754 | 483 | + | 0.505176 |
sms | Z5990 | probable ATP-dependent protease | chromosome | CDS | 5512705 | 1383 | + | 0.57556 |
sohB | Z2538 | putative protease | chromosome | CDS | 2256088 | 1050 | - | 0.504762 |
sppA | Z2799 | protease IV, a signal peptide peptidase | chromosome | CDS | 2523552 | 1857 | + | 0.519655 |
sspA | Z4587 | stringent starvation protein A | chromosome | CDS | 4179235 | 639 | - | 0.535211 |
surA | Z0062 | survival protein | chromosome | CDS | 58392 | 1287 | - | 0.537685 |
tig | Z0541 | trigger factor | chromosome | CDS | 521188 | 1299 | + | 0.510393 |
tpx | Z2452 | thiol peroxidase | chromosome | CDS | 2190542 | 507 | + | 0.514793 |
trxA | Z5291 | thioredoxin | chromosome | CDS | 4828098 | 384 | + | 0.5 |
trxB | Z1232 | thioredoxin reductase | chromosome | CDS | 1151385 | 966 | - | 0.532091 |
trxC | Z3867 | putative thioredoxin-like protein | chromosome | CDS | 3508771 | 420 | + | 0.495238 |
ureD | Z1142 | putative urease accessory protein D | chromosome | CDS | 1078653 | 699 | + | 0.537911 |
ureD_2 | Z1581 | putative urease accessory protein D | chromosome | CDS | 1474260 | 699 | + | 0.537911 |
ureE | Z1146 | putative urease accessory protein E | chromosome | CDS | 1081779 | 465 | + | 0.548387 |
ureE_2 | Z1585 | putative urease accessory protein E | chromosome | CDS | 1477386 | 465 | + | 0.548387 |
ureF | Z1147 | putative urease accessory protein F | chromosome | CDS | 1082244 | 675 | + | 0.591111 |
ureF_2 | Z1586 | putative urease accessory protein F | chromosome | CDS | 1477851 | 675 | + | 0.591111 |
ureG | Z1148 | putative urease accessory protein G | chromosome | CDS | 1082930 | 618 | + | 0.537217 |
ureG_2 | Z1587 | putative urease accessory protein G | chromosome | CDS | 1478537 | 618 | + | 0.537217 |
yagQ | Z0349 | hypothetical protein | chromosome | CDS | 330179 | 957 | - | 0.599791 |
ybaU | Z0548 | putative protease maturation protein | chromosome | CDS | 527969 | 1872 | + | 0.519765 |
ybbJ | Z0641 | hypothetical protein | chromosome | CDS | 607892 | 459 | - | 0.579521 |
ybbK | Z0642 | putative protease | chromosome | CDS | 608347 | 918 | - | 0.527233 |
ybbN | Z0645 | putative thioredoxin-like protein | chromosome | CDS | 610916 | 891 | - | 0.554433 |
ybeS | Z0795 | putative enzyme of polynucleotide modification | chromosome | CDS | 758556 | 1428 | + | 0.471289 |
ybeW | Z0800 | putative dnaK protein | chromosome | CDS | 762864 | 1671 | - | 0.501496 |
ybfN | Z0830 | hypothetical protein | chromosome | CDS | 789595 | 327 | + | 0.495413 |
ybiY | Z1047 | putative pyruvate formate-lyase 2 activating enzyme | chromosome | CDS | 988501 | 900 | - | 0.545556 |
ycaL | Z1255 | putative heat shock protein | chromosome | CDS | 1179106 | 789 | + | 0.496831 |
ydcP | Z2284 | putative collagenase | chromosome | CDS | 2063968 | 2004 | - | 0.506487 |
ydhD | Z2676 | hypothetical protein | chromosome | CDS | 2408674 | 348 | - | 0.525862 |
yeaA | Z2817 | methionine sulfoxide reductase B | chromosome | CDS | 2538821 | 414 | - | 0.480676 |
yeaZ | Z2850 | hypothetical protein | chromosome | CDS | 2567605 | 696 | - | 0.550287 |
yedF | Z3020 | hypothetical protein | chromosome | CDS | 2707212 | 234 | + | 0.482906 |
yeeD | Z3174 | hypothetical protein | chromosome | CDS | 2826946 | 228 | - | 0.517544 |
yegD | Z3238 | putative heat shock protein | chromosome | CDS | 2893668 | 1416 | + | 0.559322 |
yegQ | Z3250 | hypothetical protein | chromosome | CDS | 2911321 | 1362 | + | 0.539648 |
yfcF | Z3563 | hypothetical protein | chromosome | CDS | 3215967 | 645 | - | 0.503876 |
yfcG | Z3564 | putative S-transferase | chromosome | CDS | 3216747 | 648 | + | 0.518519 |
ygcF | Z4089 | hypothetical protein | chromosome | CDS | 3691853 | 672 | - | 0.513393 |
yggG | Z4280 | hypothetical protein | chromosome | CDS | 3889706 | 885 | + | 0.514124 |
yggX | Z4307 | hypothetical protein | chromosome | CDS | 3912999 | 276 | + | 0.471014 |
ygjD | Z4417 | putative O-sialoglycoprotein endopeptidase | chromosome | CDS | 4016376 | 1014 | - | 0.572978 |
yhaB | Z4472 | hypothetical protein | chromosome | CDS | 4074678 | 561 | + | 0.356506 |
yhbU | Z4519 | putative collagenase | chromosome | CDS | 4111199 | 996 | + | 0.573293 |
yhbV | Z4520 | hypothetical protein | chromosome | CDS | 4112185 | 897 | + | 0.556299 |
yhfA | Z4717 | hypothetical protein | chromosome | CDS | 4272542 | 405 | - | 0.51358 |
yhgI | Z4769 | hypothetical protein | chromosome | CDS | 4325019 | 576 | + | 0.524306 |
yhhP | Z4844 | hypothetical protein | chromosome | CDS | 4395222 | 246 | - | 0.520325 |
yibF | Z5013 | putative S-transferase | chromosome | CDS | 4571276 | 609 | - | 0.525452 |
yifB | Z5277 | putative 2-component regulator | chromosome | CDS | 4810874 | 1551 | - | 0.506125 |
yiiF | Z5432 | hypothetical protein | chromosome | CDS | 4947127 | 243 | + | 0.444444 |
yjjW | Z5981 | putative activating enzyme | chromosome | CDS | 5502516 | 864 | - | 0.559028 |
yliJ | Z1064 | putative transferase | chromosome | CDS | 1006800 | 633 | - | 0.516588 |
ynhC | Z2709 | hypothetical protein | chromosome | CDS | 2435427 | 1272 | - | 0.532233 |
ynhD | Z2710 | putative ATP-binding component of a transport system | chromosome | CDS | 2436673 | 747 | - | 0.500669 |
ynhE | Z2711 | hypothetical protein | chromosome | CDS | 2437429 | 1527 | - | 0.518009 |
yqjG | Z4456 | putative transferase | chromosome | CDS | 4057872 | 987 | + | 0.504559 |