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2024-06-28 12:57:49

Gene list

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COG category: NOT ANALYZED
Genomic element: pHCM1

Number of genes found: 186

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pHCM1 RBS122356 4 + 0.75
NA pHCM1 RBS536 5 - 0.6
NA pHCM1 repeat_region142985 1315 + 0.439544
NA pHCM1 RBS100397 4 + 0.75
NA pHCM1 repeat_region108797 748 + 0.532086
NA HCM1.226c pHCM1 pseudo169333 1287 - 0.647242
NA pHCM1 RBS4004 4 + 0.5
NA pHCM1 repeat_region153546 748 - 0.537433
NA pHCM1 repeat_region1871 715 - 0.532867
NA pHCM1 RBS118561 5 + 0.6
NA HCM1.247 pHCM1 pseudo181660 1205 + 0.395021
NA pHCM1 repeat_region106385 748 + 0.534759
NA pHCM1 repeat_region43057 197 - 0.365482
NA pHCM1 RBS198755 5 - 0.6
NA pHCM1 repeat_region160655 820 - 0.523171
NA pHCM1 RBS47532 4 + 0.75
NA pHCM1 RBS60935 4 - 0.75
NA pHCM1 RBS39318 4 - 0.75
NA pHCM1 RBS171963 8 - 0.5
NA pHCM1 RBS133555 5 + 0.4
NA HCM1.287c pHCM1 pseudo216827 397 - 0.496222
NA pHCM1 RBS41598 6 - 0.5
NA pHCM1 repeat_region133176 302 + 0.403974
NA pHCM1 repeat_region155823 1317 + 0.479879
NA pHCM1 repeat_region194320 15 - 0.666667
NA pHCM1 repeat_region28345 71 + 0.478873
NA pHCM1 repeat_region54578 1918 + 0.505735
NA pHCM1 RBS8980 5 - 0.6
NA pHCM1 RBS166852 5 + 0.4
NA pHCM1 RBS11488 6 - 0.333333
NA pHCM1 repeat_region125916 1252 + 0.474441
NA pHCM1 RBS3653 4 - 0.75
NA pHCM1 RBS201421 6 + 0.666667
NA pHCM1 RBS5098 5 - 0.4
NA pHCM1 RBS4577 5 - 0.6
NA pHCM1 RBS207749 6 + 0.333333
NA pHCM1 RBS37639 4 + 0.75
NA pHCM1 RBS116194 5 + 0.4
NA pHCM1 RBS10938 4 - 0.75
NA pHCM1 RBS151041 5 + 0.6
NA pHCM1 RBS98108 4 + 0.75
NA pHCM1 RBS37297 4 - 0.75
NA HCM1.170 pHCM1 pseudo125976 940 + 0.474468
NA HCM1.220 pHCM1 pseudo164126 717 + 0.67643
NA pHCM1 RBS9873 6 - 0.666667
NA pHCM1 RBS85392 5 + 0.6
NA pHCM1 RBS202633 6 + 0.333333
NA pHCM1 RBS181223 4 - 0.75
NA pHCM1 repeat_region125916 1252 + 0.474441
NA pHCM1 RBS115046 5 + 0.4
NA pHCM1 RBS59580 6 - 0.5
NA pHCM1 RBS118259 4 + 0.75
NA pHCM1 repeat_region106385 748 + 0.534759
NA pHCM1 repeat_region18961 1691 + 0.464222
NA HCM1.215 pHCM1 pseudo161477 252 + 0.543651
NA pHCM1 RBS211832 5 - 0.6
NA pHCM1 RBS18920 5 - 0.6
NA pHCM1 repeat_region159639 822 - 0.525547
NA pHCM1 RBS149568 4 - 0.75
NA pHCM1 RBS63313 4 + 0.75
NA pHCM1 RBS88308 4 + 0.75
NA pHCM1 RBS93438 4 + 0.75
NA pHCM1 RBS113587 4 + 0.5
NA pHCM1 RBS185628 4 - 0.5
NA pHCM1 RBS131866 4 - 0.75
NA pHCM1 RBS197715 7 - 0.571429
NA pHCM1 RBS128593 4 + 0.75
NA pHCM1 RBS86876 4 + 0.75
NA pHCM1 RBS40505 6 - 0.333333
NA pHCM1 RBS125965 4 + 0.75
NA HCM1.166c pHCM1 pseudo120793 255 - 0.494118
NA pHCM1 repeat_region168511 822 + 0.524331
NA pHCM1 RBS21650 7 + 0.571429
NA pHCM1 RBS134372 5 + 0.4
NA pHCM1 RBS85832 5 + 0.6
NA pHCM1 repeat_region175343 1317 + 0.485953
NA pHCM1 RBS161900 6 + 0.333333
NA pHCM1 RBS130750 5 + 0.4
NA pHCM1 RBS5753 4 - 0.5
NA pHCM1 RBS157087 4 - 0.75
NA HCM1.136a.S.1c pHCM1 misc_feature107062 183 - 0.42623
NA pHCM1 RBS217734 6 - 0.5
NA pHCM1 repeat_region192497 8 - 1
NA pHCM1 repeat_region159639 822 - 0.525547
NA pHCM1 repeat_region183224 30 + 0.333333
NA pHCM1 RBS184865 4 - 0.75
NA pHCM1 repeat_region41991 84 + 0.285714
NA pHCM1 RBS213393 5 - 0.4
NA pHCM1 RBS190861 4 + 0.75
NA pHCM1 misc_feature148263 222 + 0.40991
NA pHCM1 misc_feature80748 325 - 0.507692
NA pHCM1 RBS44347 4 + 0.75
NA pHCM1 RBS1697 6 - 0.5
NA HCM1.240 pHCM1 pseudo177511 312 + 0.330128
NA pHCM1 RBS33564 4 - 0.75
NA pHCM1 RBS137390 7 - 0.571429
NA pHCM1 repeat_region118817 1155 + 0.577489
NA pHCM1 RBS26232 5 - 0.6
NA pHCM1 repeat_region216982 8 - 1
NA pHCM1 RBS94993 4 + 0.75
NA pHCM1 RBS18387 5 - 0.8
NA pHCM1 RBS19759 5 + 0.6
NA pHCM1 repeat_region108797 748 + 0.532086
NA pHCM1 RBS117896 8 + 0.5
NA pHCM1 repeat_region130852 8 + 1
NA pHCM1 RBS91595 7 + 0.428571
NA pHCM1 repeat_region176752 749 - 0.536716
NA pHCM1 RBS51238 4 + 0.75
NA pHCM1 RBS112424 6 + 0.333333
NA pHCM1 RBS102322 4 + 0.75
NA pHCM1 RBS175392 4 + 0.75
NA pHCM1 repeat_region29394 474 + 0.487342
NA pHCM1 RBS96996 4 + 0.75
NA pHCM1 repeat_region1871 715 + 0.532867
NA pHCM1 repeat_region118817 1155 - 0.577489
NA HCM1.170 pHCM1 pseudo125976 940 + 0.474468
NA pHCM1 repeat_region112896 252 + 0.503968
NA HCM1.215 pHCM1 pseudo161477 252 + 0.543651
NA pHCM1 RBS173678 6 - 0.333333
NA pHCM1 RBS190731 6 - 0.5
NA HCM1.226c pHCM1 pseudo169333 1287 - 0.647242
NA pHCM1 RBS214504 4 - 0.75
NA pHCM1 RBS208843 5 + 0.8
NA pHCM1 repeat_region163306 820 + 0.52439
NA pHCM1 RBS64996 4 + 0.5
NA pHCM1 repeat_region43476 600 + 0.426667
NA HCM1.287c pHCM1 pseudo216827 397 - 0.496222
NA pHCM1 repeat_region176753 748 + 0.537433
NA pHCM1 RBS174877 4 + 0.75
NA pHCM1 RBS34186 5 - 0.4
NA pHCM1 RBS200684 5 - 0.4
NA pHCM1 repeat_region108465 301 - 0.458472
NA pHCM1 RBS103291 5 + 0.6
NA pHCM1 RBS99478 6 + 0.5
NA pHCM1 RBS139159 4 + 0.75
NA HCM1.240 pHCM1 pseudo177511 312 + 0.330128
NA pHCM1 repeat_region107518 96 + 0.489583
NA pHCM1 repeat_region23460 8 - 1
NA pHCM1 repeat_region163306 28 + 0.5
NA pHCM1 RBS199880 5 - 0.4
NA pHCM1 RBS114996 4 - 0.75
NA pHCM1 RBS115428 5 + 0.6
NA pHCM1 RBS40313 4 - 0.75
NA pHCM1 RBS180906 5 - 0.4
NA HCM1.247 pHCM1 pseudo181660 1205 + 0.395021
NA pHCM1 RBS77418 5 + 0.8
NA pHCM1 RBS96003 4 + 0.75
NA pHCM1 misc_feature26475 1602 + 0.508115
NA pHCM1 RBS148723 7 + 0.571429
NA pHCM1 RBS137197 7 - 0.571429
NA pHCM1 RBS161418 4 - 0.75
NA pHCM1 repeat_region142985 1315 + 0.439544
NA HCM1.220 pHCM1 pseudo164126 717 + 0.67643
NA pHCM1 RBS4836 5 - 0.4
NA HCM1.166c pHCM1 pseudo120793 255 - 0.494118
NA pHCM1 RBS155772 4 - 0.5
NA pHCM1 RBS104139 4 + 0.75
NA pHCM1 repeat_region153546 748 - 0.537433
NA pHCM1 RBS6334 4 - 0.75
NA HCM1.217 pHCM1 pseudo162921 1205 + 0.539419
NA pHCM1 RBS163359 4 + 0.75
NA pHCM1 repeat_region183224 1315 - 0.439544
NA pHCM1 repeat_region201039 133 + 0.390977
NA pHCM1 RBS115732 4 + 0.75
NA pHCM1 repeat_region168511 822 + 0.524331
NA pHCM1 repeat_region160655 820 - 0.523171
NA pHCM1 RBS138950 4 - 0.75
NA pHCM1 RBS21526 5 + 0.6
NA pHCM1 RBS154514 6 + 0.333333
NA pHCM1 repeat_region155823 1317 + 0.479879
NA pHCM1 RBS215450 6 - 0.5
NA pHCM1 RBS15523 7 - 0.428571
NA pHCM1 RBS216718 5 - 0.4
NA pHCM1 RBS171606 6 - 0.666667
NA pHCM1 RBS212781 5 - 0.6
NA pHCM1 repeat_region175343 1317 + 0.485953
NA pHCM1 RBS174461 5 - 0.6
NA pHCM1 RBS212230 7 - 0.571429
NA HCM1.217 pHCM1 pseudo162921 1205 + 0.539419
insA HCM1.138 pHCM1 misc_feature109093 6 +
insA HCM1.205c pHCM1 misc_feature153992 6 -
insA HCM1.239c pHCM1 misc_feature177199 6 -
insA HCM1.136 pHCM1 misc_feature106681 6 +
insA HCM1.05c pHCM1 misc_feature2284 6 -
tnpA HCM1.210c pHCM1 pseudo157158 3497 - 0.608808
tnpA HCM1.210c pHCM1 pseudo157158 3497 - 0.608808