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2024-06-26 01:49:34

Gene list

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COG category: Cell motility
Genomic element: chromosome

Number of genes found: 77

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Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SSON_3900 putative fimbrial chaperoneSubName: Full=Putative fimbrial chaperone; chromosome CDS4116983 303 + 0.376238
NA SSON_2420 putative tail component of prophageSubName: Full=Putative tail component of prophage; chromosome CDS2558317 741 - 0.578947
NA SSON_0026 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS25267 369 - 0.384824
NA SSON_2391 putative minor fimbrial subunitSubName: Full=Putative minor fimbrial subunit; chromosome CDS2521916 525 - 0.457143
NA SSON_2436 putative endopeptidaseSubName: Full=Putative endopeptidase; chromosome CDS2571789 459 - 0.51634
NA SSON_0947 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1021484 564 + 0.47695
NA SSON_1980 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2081218 279 + 0.437276
NA SSON_0024 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS23714 804 - 0.402985
cheA SSON_1229 sensory transducer kinase between chemo- signal receptors and CheB and CheYSubName: Full=Sensory transducer kinase between chemo-signal receptors and CheB and CheY; chromosome CDS1302515 1965 + 0.531298
cheB SSON_1234 response regulator for chemotaxisRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS1309338 1050 + 0.537143
cheR SSON_1233 response regulator for chemotaxis; protein glutamate methyltransferaseRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS1308475 861 + 0.537747
cheW SSON_1230 positive regulator of CheA protein activitySubName: Full=Positive regulator of CheA protein activity; chromosome CDS1304500 504 + 0.515873
cheZ SSON_1236 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS1310802 645 + 0.533333
csgA SSON_1053 curlin major subunitSubName: Full=Curlin major subunit; chromosome CDS1133630 453 + 0.507726
ecpD SSON_0152 probable pilin chaperone similar to PapDSubName: Full=Probable pilin chaperone similar to PapD; chromosome CDS169651 741 - 0.442645
fhiA SSON_0273 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS299468 1740 - 0.574713
flgA SSON_1092 flagellar protein for assembly of basal-body periplasmic P ringSubName: Full=Flagellar protein for assembly of basal-body periplasmic P ring; chromosome CDS1171509 660 - 0.527273
flgB SSON_1093 flagellar protein for cell-proximal portion of basal-body rodRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS1172323 417 + 0.534772
flgC SSON_1094 flagellar protein for cell-proximal portion of basal-body rodSubName: Full=Flagellar protein for cell-proximal portion of basal-body rod; chromosome CDS1172743 405 + 0.533333
flgD SSON_1095 flagellar protein for initiation of hook assemblySubName: Full=Flagellar protein for initiation of hook assembly; chromosome CDS1173159 696 + 0.548851
flgE SSON_1096 flagellar hook proteinSubName: Full=Flagellar hook protein; chromosome CDS1173879 1206 + 0.515755
flgF SSON_1097 flagellar protein for cell-proximal portion of basal-body rodSubName: Full=Flagellar protein for cell-proximal portion of basal-body rod; chromosome CDS1175104 756 + 0.589947
flgH SSON_1099 flagellar protein for basal-body outer-membrane L ringRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1176856 699 + 0.53505
flgI SSON_1100 P-ring of flagella basal bodyRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1177566 1098 + 0.540073
flgJ SSON_1101 flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS1178663 942 + 0.544586
flgK SSON_1102 flagellar hook-filament junction protein 1SubName: Full=Flagellar hook-filament junction protein 1; chromosome CDS1179670 1644 + 0.51764
flgL SSON_1103 flagellar hook-filament junction proteinSubName: Full=Flagellar hook-filament junction protein; chromosome CDS1181325 954 + 0.507338
flgM SSON_1091 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS1171140 294 - 0.520408
flgN SSON_1090 protein of flagellar biosynthesisSubName: Full=Protein of flagellar biosynthesis; chromosome CDS1170719 417 - 0.479616
flhB SSON_1240 putative part of export apparatus for flagellar proteinsSubName: Full=Putative part of export apparatus for flagellar proteins; chromosome CDS1314044 972 + 0.544239
fliC SSON_1193 flagellar filament structural proteinSubName: Full=Flagellar filament structural protein; chromosome CDS1271890 1575 + 0.428571
fliE SSON_1995 flagellar basal-body componentRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2093645 315 - 0.539683
fliF SSON_1996 flagellar basal-body MS(membrane and supramembrane)-ring and collar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2094175 1659 + 0.546715
fliG SSON_1997 FliGRecName: Full=Flagellar motor switch protein FliG; chromosome CDS2095826 996 + 0.557229
fliH SSON_1998 flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS2096793 708 + 0.573446
fliI SSON_1999 flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; chromosome CDS2097500 1374 + 0.580058
fliJ SSON_2000 flagellar fliJ proteinSubName: Full=Flagellar fliJ protein; chromosome CDS2098892 444 + 0.527027
fliK SSON_2001 flagellar hook-length control proteinSubName: Full=Flagellar hook-length control protein; chromosome CDS2099332 1128 + 0.549645
fliL SSON_2002 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2100564 465 + 0.526882
fliM SSON_2003 flagellar motor switch protein FliMRecName: Full=Flagellar motor switch protein FliM; chromosome CDS2101033 1005 + 0.529353
fliN SSON_2004 FliNSubName: Full=FliN; chromosome CDS2102034 414 + 0.548309
fliO SSON_2005 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2102450 366 + 0.54918
fliP SSON_2006 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2102815 738 + 0.531165
fliQ SSON_2007 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2103562 270 + 0.514815
fliR SSON_2008 flagellar biosynthesisRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS2103840 786 + 0.477099
fliS SSON_1981 flagellar repressor of class 3a and 3b operonsSubName: Full=Flagellar repressor of class 3a and 3b operons; chromosome CDS2081511 411 + 0.493917
hofC SSON_0114 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS123749 1203 - 0.526185
lpfA SSON_3899 putative major fimbrial subunitSubName: Full=Putative major fimbrial subunit; chromosome CDS4116363 573 + 0.47644
mbhA SSON_0272 putative motility proteinSubName: Full=Putative motility protein; chromosome CDS301152 786 + 0.52799
motA SSON_1227 proton conductor component of motorSubName: Full=Proton conductor component of motor; chromosome CDS1300700 888 + 0.51464
motB SSON_1228 MotBSubName: Full=MotB; chromosome CDS1301584 927 + 0.528587
ppdA SSON_2983 prepilin peptidase dependent protein ASubName: Full=Prepilin peptidase dependent protein A; chromosome CDS3133322 471 - 0.541401
ppdD SSON_0116 prelipin peptidase dependent proteinSubName: Full=Prelipin peptidase dependent protein; chromosome CDS126337 441 - 0.52381
sfmF SSON_0507 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS536175 516 + 0.498062
spy SSON_1414 periplasmic protein related to spheroblast formationSubName: Full=Periplasmic protein related to spheroblast formation; chromosome CDS1489467 462 + 0.519481
tap SSON_1232 methyl-accepting chemotaxis protein IVSubName: Full=Methyl-accepting chemotaxis protein IV; chromosome CDS1306855 1602 + 0.535581
tar SSON_1231 methyl-accepting chemotaxis protein IISubName: Full=Methyl-accepting chemotaxis protein II; chromosome CDS1305148 1662 + 0.529483
trg SSON_1721 methyl-accepting chemotaxis protein IIISubName: Full=Methyl-accepting chemotaxis protein III; chromosome CDS1823714 1641 - 0.511274
yadN SSON_0153 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS170496 585 - 0.441026
ybgD SSON_0670 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS712918 567 - 0.477954
ybgP SSON_0668 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS709663 732 - 0.495902
ycbF SSON_0948 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS1022013 738 + 0.51897
ycbQ SSON_0942 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1015950 552 + 0.434783
ycbR SSON_0943 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS1016584 702 + 0.451567
yehC SSON_2159 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS2263400 720 - 0.391667
yehD SSON_2160 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS2264154 543 - 0.405157
yfcS SSON_2393 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS2523427 645 - 0.486822
yfcU SSON_2394 PapC-like porin proteinSubName: Full=PapC-like porin protein; chromosome CDS2524198 2643 - 0.510027
yggR SSON_3105 putative protein transportSubName: Full=Uncharacterized protein; chromosome CDS3265817 1026 - 0.54386
ygiL SSON_3180 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS3338921 552 + 0.443841
yifL SSON_3981 hypothetical proteinSubName: Full=Uncharacterized conserved protein; chromosome CDS4203744 204 + 0.52451
yiiO SSON_4083 Uncharacterized periplasmic proteinSubName: Full=Uncharacterized periplasmic protein; chromosome CDS4319859 504 + 0.5
yjaI SSON_4175 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4419475 567 - 0.516755
yqiH SSON_3183 hypothetical proteinSubName: Full=Putative membrane protein; chromosome CDS3342966 759 + 0.389987
yraJ SSON_3289 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS3464292 2517 + 0.473977
yraK SSON_3291 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS3468293 954 + 0.474843
yrbF SSON_3343 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS3518330 810 - 0.545679