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2024-06-08 21:49:06

Gene list

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COG category: Replication, recombination and repair
Genomic element: pSD1_197

Number of genes found: 106

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_P022 putative transposase, fragmentpSD1_197 CDS18083 207 + 0.449275
NA SDY_P012 IS2 ORF1pSD1_197 CDS10361 366 - 0.530055
NA SDY_P011 IS2 ORF2pSD1_197 CDS9498 840 - 0.542857
NA SDY_P156 putative transposasepSD1_197 CDS121228 1116 + 0.578853
NA SDY_P142 IS600 ORF2pSD1_197 CDS112011 189 - 0.529101
NA SDY_P077 IS600 ORF2pSD1_197 CDS65508 714 - 0.518207
NA SDY_P210 IS629 ORF2pSD1_197 CDS166995 357 - 0.54902
NA SDY_P106 hypothetical proteinpSD1_197 CDS82697 2850 - 0.510175
NA SDY_P005 iso-IS1 ORF2pSD1_197 CDS4663 396 + 0.515152
NA SDY_P152 IS600 ORF1pSD1_197 CDS119107 303 + 0.468647
NA SDY_P014 putative transposasepSD1_197 CDS11826 378 - 0.529101
NA SDY_P053 putative transposasepSD1_197 CDS46208 330 - 0.530303
NA SDY_P207 IS3 ORF2pSD1_197 CDS166574 243 - 0.559671
NA SDY_P111 putative transposasepSD1_197 CDS90163 669 + 0.538117
NA SDY_P068 ISSfl1 ORF2pSD1_197 CDS59024 390 - 0.512821
NA SDY_P030 IS100 ORF2pSD1_197 CDS24880 642 + 0.5
NA SDY_P197 IS3 ORF1pSD1_197 CDS159579 219 - 0.502283
NA SDY_P112 hypothetical proteinpSD1_197 CDS90973 309 - 0.543689
NA SDY_P114 IS186 ORF1pSD1_197 CDS91637 693 + 0.484848
NA SDY_P057 iso-IS1 ORF2pSD1_197 CDS51512 396 - 0.517677
NA SDY_P033 putative transposase, fragmentpSD1_197 CDS28703 486 + 0.450617
NA SDY_P094 iso-IS1 ORF2pSD1_197 CDS74527 216 - 0.49537
NA SDY_P127 hypothetical proteinpSD1_197 CDS103259 303 + 0.432343
NA SDY_P054 hypothetical proteinpSD1_197 CDS46613 174 - 0.45977
NA SDY_P203 IS629 ORF2pSD1_197 CDS163622 648 + 0.549383
NA SDY_P200 putative transposasepSD1_197 CDS162252 201 - 0.567164
NA SDY_P009 IS600 ORF1pSD1_197 CDS6432 303 - 0.465347
NA SDY_P143 IS600 ORF1pSD1_197 CDS112235 303 - 0.465347
NA SDY_P060 putative transposasepSD1_197 CDS52645 579 + 0.499136
NA SDY_P083 iso-IS1 ORF1pSD1_197 CDS69343 273 - 0.498168
NA SDY_P146 IS100 ORF2pSD1_197 CDS113794 663 - 0.496229
NA SDY_P133 iso-IS1 ORF2pSD1_197 CDS104960 396 - 0.520202
NA SDY_P116 IS600 ORF1pSD1_197 CDS93224 303 - 0.465347
NA SDY_P042 ISSfl1 ORF1pSD1_197 CDS39246 450 + 0.531111
NA SDY_P217 IS629 ORF2pSD1_197 CDS175253 624 + 0.532051
NA SDY_P071 ISSfl1 ORF2pSD1_197 CDS61897 390 - 0.510256
NA SDY_P062 IS629 ORF2pSD1_197 CDS54044 891 + 0.538721
NA SDY_P134 iso-IS1 ORF1pSD1_197 CDS105382 273 - 0.501832
NA SDY_P027 IS3 ORF2pSD1_197 CDS22096 870 + 0.554023
NA SDY_P149 ISSfl4 ORF1pSD1_197 CDS116076 588 - 0.493197
NA SDY_P216 IS2 ORF1pSD1_197 CDS174754 366 - 0.530055
NA SDY_P150 hypothetical proteinpSD1_197 CDS116800 174 - 0.45977
NA SDY_P008 IS600 ORF2pSD1_197 CDS5974 423 - 0.534279
NA SDY_P034 putative reverse transcriptasepSD1_197 CDS29477 1128 - 0.481383
NA SDY_P159 IS100 ORF1pSD1_197 CDS123820 927 - 0.529666
NA SDY_P213 iso-IS1 ORF1pSD1_197 CDS169811 273 - 0.509158
NA SDY_P158 ISSfl2 ORFpSD1_197 CDS122432 1197 - 0.578947
NA SDY_P029 IS100 ORF1pSD1_197 CDS23820 1089 + 0.535354
NA SDY_P021 putative IS orf, fragmentpSD1_197 CDS16115 1200 + 0.555
NA SDY_P105 IS3 ORF2pSD1_197 CDS82491 219 + 0.579909
NA SDY_P208 IS629 ORF2pSD1_197 CDS166789 324 - 0.589506
NA SDY_P215 IS2 ORF2pSD1_197 CDS173891 840 - 0.544048
NA SDY_P196 IS3 ORF2pSD1_197 CDS159179 429 - 0.568765
NA SDY_P093 putative IS orf, fragmentpSD1_197 CDS73771 381 + 0.580052
NA SDY_P026 IS3 ORF1pSD1_197 CDS21800 300 + 0.523333
NA SDY_P035 IS629 ORF2pSD1_197 CDS31384 624 - 0.540064
NA SDY_P019 putative IS orf, fragmentpSD1_197 CDS15233 408 + 0.529412
NA SDY_P121 oriT nicking and unwinding protein, fragmentpSD1_197 CDS96090 420 + 0.561905
NA SDY_P043 ISSfl1 ORF2pSD1_197 CDS39701 390 + 0.512821
NA SDY_P028 iso-IS1 ORF1pSD1_197 CDS23305 273 + 0.520147
NA SDY_P212 iso-IS1 ORF2pSD1_197 CDS169389 396 - 0.517677
NA SDY_P050 iso-IS1 ORF1pSD1_197 CDS44506 273 - 0.509158
NA SDY_P195 IS600 ORF2pSD1_197 CDS158350 621 - 0.523349
NA SDY_P081 IS2 orf1, fragmentpSD1_197 CDS68076 219 - 0.420091
NA SDY_P066 iso-IS1 ORF2pSD1_197 CDS57295 396 + 0.517677
NA SDY_P065 iso-IS1 ORF1pSD1_197 CDS56996 273 + 0.505495
NA SDY_P007 ISEc8 orf, fragmentpSD1_197 CDS5493 402 - 0.559702
NA SDY_P084 IS100 ORF2pSD1_197 CDS69951 234 + 0.482906
NA SDY_P095 iso-IS1 ORF1pSD1_197 CDS74948 273 - 0.509158
NA SDY_P092 putative plasmid stable inheritance proteinpSD1_197 CDS72514 498 - 0.355422
NA SDY_P016 IS3 orf2, fragmentpSD1_197 CDS13547 120 - 0.441667
NA SDY_P154 IS1353 transposasepSD1_197 CDS120388 243 + 0.502058
NA SDY_P122 oriT nicking and unwinding protein, fragmentpSD1_197 CDS96517 4194 + 0.599189
NA SDY_P206 putative reverse transcriptase, fragmentpSD1_197 CDS166459 201 - 0.567164
NA SDY_P073 hypothetical proteinpSD1_197 CDS62787 375 - 0.416
NA SDY_P115 IS600 ORF2pSD1_197 CDS92370 714 - 0.518207
NA SDY_P072 ISSfl1 ORF1pSD1_197 CDS62292 450 - 0.531111
NA SDY_P091 putative IS orf, fragmentpSD1_197 CDS73010 762 + 0.555118
NA SDY_P047 IS1 ORF, fragmentpSD1_197 CDS42851 285 - 0.452632
NA SDY_P201 putative transposasepSD1_197 CDS162546 378 - 0.529101
NA SDY_P153 IS600 ORF2pSD1_197 CDS119550 714 + 0.519608
NA SDY_P001 putative resolvase, fragmentpSD1_197 CDS359 465 + 0.509677
NA SDY_P039 IS600 ORF2pSD1_197 CDS37326 375 - 0.488
NA SDY_P199 putative transposasepSD1_197 CDS162115 201 - 0.467662
NA SDY_P102 putative IS orfpSD1_197 CDS80513 243 + 0.54321
NA SDY_P058 iso-IS1 ORF1pSD1_197 CDS51934 273 - 0.509158
NA SDY_P098 iso-IS1 ORF2pSD1_197 CDS76543 396 + 0.512626
NA SDY_P222 IS3 ORF2pSD1_197 CDS179875 153 + 0.490196
NA SDY_P049 iso-IS1 ORF2pSD1_197 CDS44084 396 - 0.517677
NA SDY_P020 ISSfl4 ORF2pSD1_197 CDS15640 348 + 0.563218
NA SDY_P048 IS600 ORF1pSD1_197 CDS43633 303 + 0.465347
NA SDY_P051 IS629 ORF2pSD1_197 CDS44973 648 - 0.546296
NA SDY_P104 putative IS orfpSD1_197 CDS82151 243 - 0.55144
NA SDY_P130 hypothetical proteinpSD1_197 CDS104290 231 + 0.489177
NA SDY_P079 IS600 ORF1pSD1_197 CDS67139 303 - 0.468647
NA SDY_P040 IS600 ORF2pSD1_197 CDS37678 456 - 0.515351
NA SDY_P113 hypothetical proteinpSD1_197 CDS91342 204 - 0.588235
NA SDY_P155 IS1353 transposasepSD1_197 CDS120685 354 + 0.497175
NA SDY_P103 IS4 ORFpSD1_197 CDS80794 1347 + 0.537491
insB SDY_P078 IS1 ORF2pSD1_197 CDS66288 378 - 0.542328
insB SDY_P128 IS1 ORF2pSD1_197 CDS103496 246 - 0.512195
insB SDY_P041 IS1 ORF2pSD1_197 CDS38236 378 - 0.537037
ipaB SDY_P166 IpaBpSD1_197 CDS133340 1743 - 0.378084
ipaH SDY_P140 invasion plasmid antigen, fragmentpSD1_197 CDS110427 1545 + 0.541748
spa32 SDY_P189 Spa32pSD1_197 CDS153030 879 + 0.311718
yihA SDY_P135 hypothetical proteinpSD1_197 CDS105714 501 + 0.52495