Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: pSS_046
Number of genes found: 115
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella sonnei Ss046, Ss046 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SSO_P200 | hypothetical protein | pSS_046 | CDS | 177847 | 462 | + | 0.478355 |
NA | SSO_P025 | IS3 ORF1 | pSS_046 | CDS | 19878 | 300 | + | 0.53 |
NA | SSO_P221 | IS630 ORF | pSS_046 | CDS | 192788 | 276 | + | 0.507246 |
NA | SSO_P051 | IS600 ORF2 | pSS_046 | CDS | 48324 | 531 | - | 0.53484 |
NA | SSO_P193 | IS600 ORF1 | pSS_046 | CDS | 173682 | 303 | + | 0.462046 |
NA | SSO_P132 | IS21 ORF2 | pSS_046 | CDS | 119425 | 798 | + | 0.525063 |
NA | SSO_P038 | IS629 ORF2 | pSS_046 | CDS | 33890 | 888 | - | 0.540541 |
NA | SSO_P150 | hypothetical protein | pSS_046 | CDS | 134323 | 246 | - | 0.528455 |
NA | SSO_P035 | hypothetical protein | pSS_046 | CDS | 30380 | 585 | - | 0.488889 |
NA | SSO_P018 | ISSfl4 ORF2 | pSS_046 | CDS | 13793 | 348 | + | 0.566092 |
NA | SSO_P173 | IS4 ORF | pSS_046 | CDS | 150124 | 1329 | + | 0.542513 |
NA | SSO_P037 | IS21 ORF2 | pSS_046 | CDS | 32765 | 798 | + | 0.526316 |
NA | SSO_P061 | IS629 ORF2 | pSS_046 | CDS | 57898 | 888 | + | 0.540541 |
NA | SSO_P046 | ISSfl2 ORF | pSS_046 | CDS | 41773 | 546 | - | 0.57326 |
NA | SSO_P188 | IS600 ORF1 | pSS_046 | CDS | 165069 | 303 | + | 0.465347 |
NA | SSO_P073 | IS600 ORF1 | pSS_046 | CDS | 69155 | 303 | + | 0.465347 |
NA | SSO_P154 | IS2 ORF1 | pSS_046 | CDS | 136883 | 366 | - | 0.530055 |
NA | SSO_P138 | putative reverse transcriptase, fragment | pSS_046 | CDS | 122938 | 201 | - | 0.562189 |
NA | SSO_P060 | IS629 ORF1 | pSS_046 | CDS | 57572 | 327 | + | 0.541284 |
NA | SSO_P080 | IS2 ORF1 | pSS_046 | CDS | 72928 | 366 | - | 0.530055 |
NA | SSO_P122 | putative transposase | pSS_046 | CDS | 112382 | 756 | + | 0.507937 |
NA | SSO_P153 | IS2 ORF2 | pSS_046 | CDS | 136020 | 840 | - | 0.546429 |
NA | SSO_P189 | IS600 ORF2 | pSS_046 | CDS | 165512 | 714 | + | 0.521008 |
NA | SSO_P139 | IS3 ORF2 | pSS_046 | CDS | 123053 | 243 | - | 0.559671 |
NA | SSO_P140 | IS629 ORF2 | pSS_046 | CDS | 123268 | 564 | - | 0.558511 |
NA | SSO_P043 | IS2 ORF2 | pSS_046 | CDS | 40072 | 288 | + | 0.503472 |
NA | SSO_P183 | IS630 ORF | pSS_046 | CDS | 160722 | 1032 | - | 0.527132 |
NA | SSO_P016 | putative transposase | pSS_046 | CDS | 12798 | 285 | + | 0.536842 |
NA | SSO_P077 | IS21 ORF1 | pSS_046 | CDS | 71276 | 336 | + | 0.565476 |
NA | SSO_P239 | IS911 ORF2 | pSS_046 | CDS | 209915 | 858 | + | 0.547786 |
NA | SSO_P216 | IS600 ORF2 | pSS_046 | CDS | 189552 | 714 | - | 0.519608 |
NA | SSO_P027 | IS100 ORF1 | pSS_046 | CDS | 21831 | 1005 | + | 0.527363 |
NA | SSO_P164 | IS600 ORF1 | pSS_046 | CDS | 143931 | 303 | + | 0.462046 |
NA | SSO_P137 | putative reverse transcriptase, fragment | pSS_046 | CDS | 122667 | 240 | - | 0.520833 |
NA | SSO_P029 | putative transposase | pSS_046 | CDS | 24497 | 1128 | + | 0.493794 |
NA | SSO_P184 | putative transposase | pSS_046 | CDS | 161897 | 669 | + | 0.536622 |
NA | SSO_P146 | IS629 ORF2 | pSS_046 | CDS | 130607 | 606 | + | 0.537954 |
NA | SSO_P174 | putative IS orf | pSS_046 | CDS | 151463 | 243 | - | 0.54321 |
NA | SSO_P128 | hypothetical protein | pSS_046 | CDS | 116887 | 333 | - | 0.525526 |
NA | SSO_P149 | hypothetical protein | pSS_046 | CDS | 133712 | 528 | - | 0.460227 |
NA | SSO_P002 | IS2 ORF2 | pSS_046 | CDS | 275 | 219 | - | 0.479452 |
NA | SSO_P026 | IS3 ORF2 | pSS_046 | CDS | 20174 | 870 | + | 0.556322 |
NA | SSO_P123 | IS600 ORF2 | pSS_046 | CDS | 113272 | 189 | + | 0.460317 |
NA | SSO_P161 | hypothetical protein | pSS_046 | CDS | 141439 | 474 | + | 0.582278 |
NA | SSO_P151 | putative reverse transcriptase, fragment | pSS_046 | CDS | 134538 | 1128 | - | 0.548759 |
NA | SSO_P155 | putative IS orf, fragment | pSS_046 | CDS | 137447 | 219 | - | 0.420091 |
NA | SSO_P019 | putative IS orf, fragment | pSS_046 | CDS | 14160 | 1233 | + | 0.559611 |
NA | SSO_P175 | IS3 ORF2 | pSS_046 | CDS | 151803 | 219 | + | 0.575342 |
NA | SSO_P134 | putative transposase, fragment | pSS_046 | CDS | 120751 | 228 | - | 0.464912 |
NA | SSO_P127 | putative transposase, fragment | pSS_046 | CDS | 116456 | 201 | - | 0.472637 |
NA | SSO_P064 | ISSfl1 ORF2 | pSS_046 | CDS | 61000 | 390 | + | 0.515385 |
NA | SSO_P063 | ISSfl1 ORF1 | pSS_046 | CDS | 60545 | 450 | + | 0.526667 |
NA | SSO_P079 | IS2 ORF2 | pSS_046 | CDS | 72065 | 840 | - | 0.546429 |
NA | SSO_P036 | IS21 ORF1 | pSS_046 | CDS | 31617 | 1149 | + | 0.531767 |
NA | SSO_P124 | IS3 ORF2 | pSS_046 | CDS | 113457 | 384 | - | 0.575521 |
NA | SSO_P045 | ISSfl2 ORF | pSS_046 | CDS | 41178 | 417 | - | 0.604317 |
NA | SSO_P120 | IS600 ORF1 | pSS_046 | CDS | 110239 | 303 | - | 0.458746 |
NA | SSO_P055 | ISSfl1 ORF2 | pSS_046 | CDS | 50719 | 390 | + | 0.515385 |
NA | SSO_P141 | IS629 ORF1 | pSS_046 | CDS | 123938 | 219 | - | 0.538813 |
NA | SSO_P235 | IS629 ORF1 | pSS_046 | CDS | 207506 | 276 | + | 0.550725 |
NA | SSO_P218 | IS630 ORF | pSS_046 | CDS | 190993 | 192 | + | 0.510417 |
NA | SSO_P131 | IS21 ORF1 | pSS_046 | CDS | 118277 | 1149 | + | 0.531767 |
NA | SSO_P081 | ISSfl2 ORF | pSS_046 | CDS | 73542 | 1197 | - | 0.578112 |
NA | SSO_P162 | IS21 ORF2 | pSS_046 | CDS | 141951 | 798 | - | 0.526316 |
NA | SSO_P082 | IS100 ORF1 | pSS_046 | CDS | 74930 | 1005 | - | 0.527363 |
NA | SSO_P033 | putative transposase, fragment | pSS_046 | CDS | 29064 | 486 | + | 0.450617 |
NA | SSO_P028 | ISSfl2 ORF | pSS_046 | CDS | 23027 | 1197 | + | 0.578112 |
NA | SSO_P177 | IS600 ORF1 | pSS_046 | CDS | 155244 | 303 | + | 0.465347 |
NA | SSO_P030 | iso-IS1 ORF2 | pSS_046 | CDS | 26092 | 216 | + | 0.527778 |
NA | SSO_P186 | IS186 ORF1 | pSS_046 | CDS | 163371 | 717 | + | 0.482566 |
NA | SSO_P192 | oriT nicking and unwinding protein, fragment | pSS_046 | CDS | 169342 | 4284 | + | 0.594538 |
NA | SSO_P075 | putative IS orf | pSS_046 | CDS | 70436 | 243 | + | 0.497942 |
NA | SSO_P039 | IS629 ORF1 | pSS_046 | CDS | 34777 | 276 | - | 0.550725 |
NA | SSO_P217 | IS600 ORF1 | pSS_046 | CDS | 190406 | 303 | - | 0.462046 |
NA | SSO_P236 | putative transposase | pSS_046 | CDS | 207903 | 270 | - | 0.451852 |
NA | SSO_P010 | hypothetical protein | pSS_046 | CDS | 8476 | 585 | - | 0.521368 |
NA | SSO_P013 | IS21 ORF2 | pSS_046 | CDS | 11667 | 180 | - | 0.433333 |
NA | SSO_P166 | putative IS orf, fragment | pSS_046 | CDS | 145341 | 255 | + | 0.568627 |
NA | SSO_P157 | IS100 ORF2 | pSS_046 | CDS | 139323 | 234 | + | 0.491453 |
NA | SSO_P034 | hypothetical protein | pSS_046 | CDS | 29838 | 600 | - | 0.468333 |
NA | SSO_P006 | IS630 ORF | pSS_046 | CDS | 3729 | 1032 | + | 0.528101 |
NA | SSO_P052 | IS600 ORF1 | pSS_046 | CDS | 48995 | 303 | - | 0.465347 |
NA | SSO_P129 | IS629 ORF1 | pSS_046 | CDS | 117401 | 327 | + | 0.544343 |
NA | SSO_P054 | ISSfl1 ORF1 | pSS_046 | CDS | 50243 | 471 | + | 0.5138 |
NA | SSO_P172 | putative IS orf | pSS_046 | CDS | 149825 | 243 | + | 0.55144 |
NA | SSO_P021 | putative transposase, fragment | pSS_046 | CDS | 16197 | 171 | + | 0.461988 |
NA | SSO_P119 | IS600 ORF2 | pSS_046 | CDS | 109478 | 621 | - | 0.521739 |
NA | SSO_P017 | IS4 ORF | pSS_046 | CDS | 13093 | 573 | - | 0.521815 |
NA | SSO_P163 | IS21 ORF1 | pSS_046 | CDS | 142748 | 927 | - | 0.538296 |
NA | SSO_P130 | IS629 ORF2 | pSS_046 | CDS | 117727 | 453 | + | 0.543046 |
NA | SSO_P001 | putative resolvase, fragment | pSS_046 | CDS | 485 | 465 | + | 0.507527 |
NA | SSO_P012 | IS630 ORF | pSS_046 | CDS | 10630 | 1032 | + | 0.530039 |
NA | SSO_P066 | ISSfl1 ORF1 | pSS_046 | CDS | 63417 | 297 | + | 0.498316 |
NA | SSO_P152 | IS600 ORF2 | pSS_046 | CDS | 135678 | 201 | - | 0.527363 |
NA | SSO_P042 | putative transposase | pSS_046 | CDS | 38511 | 1128 | + | 0.493794 |
NA | SSO_P074 | IS600 ORF2 | pSS_046 | CDS | 69598 | 714 | + | 0.519608 |
NA | SSO_P194 | IS600 ORF2 | pSS_046 | CDS | 174125 | 714 | + | 0.521008 |
NA | SSO_P228 | IS630 ORF | pSS_046 | CDS | 199692 | 1032 | + | 0.528101 |
NA | SSO_P145 | IS629 ORF1 | pSS_046 | CDS | 130009 | 327 | + | 0.541284 |
NA | SSO_P076 | IS1353 putative transposase-like protein | pSS_046 | CDS | 70733 | 423 | + | 0.503546 |
NA | SSO_P178 | IS600 ORF2 | pSS_046 | CDS | 155687 | 714 | + | 0.519608 |
NA | SSO_P071 | ISSfl4 ORF1 | pSS_046 | CDS | 66360 | 588 | - | 0.493197 |
NA | SSO_P121 | putative transposase | pSS_046 | CDS | 110830 | 1536 | + | 0.540365 |
NA | SSO_P133 | IS629 ORF2 | pSS_046 | CDS | 120320 | 429 | + | 0.5338 |
NA | SSO_P125 | IS3 ORF1 | pSS_046 | CDS | 113837 | 300 | - | 0.526667 |
NA | SSO_P068 | ISSfl1 ORF2 | pSS_046 | CDS | 64523 | 363 | + | 0.53168 |
NA | SSO_P056 | IS630 ORF | pSS_046 | CDS | 51223 | 1032 | + | 0.52907 |
NA | SSO_P210 | ISSfl1 ORF2 | pSS_046 | CDS | 184802 | 225 | + | 0.52 |
NA | SSO_P176 | hypothetical protein | pSS_046 | CDS | 152009 | 2913 | - | 0.509097 |
NA | SSO_P165 | IS600 ORF2 | pSS_046 | CDS | 144374 | 714 | + | 0.519608 |
insB | SSO_P160 | IS1 ORF2 | pSS_046 | CDS | 140818 | 504 | + | 0.543651 |
insB | SSO_P203 | IS1 ORF2 | pSS_046 | CDS | 178862 | 504 | - | 0.543651 |
insB | SSO_P067 | IS1 ORF2 | pSS_046 | CDS | 63936 | 504 | + | 0.543651 |
ipaB | SSO_P090 | IpaB | pSS_046 | CDS | 84468 | 1743 | - | 0.378084 |
spa32 | SSO_P113 | Spa32 | pSS_046 | CDS | 104158 | 879 | + | 0.312856 |