Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: chromosome
Number of genes found: 353
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli O157:H7 EDL933, EDL933 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Z3162 | IS629 transposase | chromosome | CDS | 2818563 | 891 | + | 0.529742 |
NA | Z1827 | putative IS encoded protein | chromosome | CDS | 1671207 | 354 | + | 0.502825 |
NA | Z0324 | integrase protein for prophage CP-933I | chromosome | CDS | 310756 | 1233 | + | 0.4485 |
NA | Z2073 | putative transposase within CP-933O | chromosome | CDS | 1871077 | 648 | - | 0.541667 |
NA | Z1020 | putative ATP-dependent helicase | chromosome | CDS | 959163 | 2151 | + | 0.537424 |
NA | Z1660 | transposase for IS629 | chromosome | CDS | 1538585 | 888 | - | 0.533784 |
NA | Z6014 | unknown protein encoded in ISEc8 | chromosome | CDS | 2277639 | 402 | + | 0.514925 |
NA | Z0367 | unknown protein encoded in ISEc8 | chromosome | CDS | 346224 | 1539 | + | 0.584795 |
NA | Z2110 | putative transposase encoded within prophage CP-933O | chromosome | CDS | 1896409 | 327 | + | 0.541284 |
NA | Z4801 | putative ATP-dependent DNA helicase (together with adjacent 3 orfs) | chromosome | CDS | 4360085 | 975 | - | 0.482051 |
NA | Z4313 | putative pathogenicity island integrase | chromosome | CDS | 3919545 | 1266 | + | 0.475513 |
NA | Z2101 | putative endonuclease encoded within prophage CP-933O | chromosome | CDS | 1890730 | 306 | + | 0.519608 |
NA | Z1221 | putative transposase | chromosome | CDS | 1142979 | 888 | - | 0.53491 |
NA | Z1122 | hypothetical protein | chromosome | CDS | 1062369 | 102 | + | 0.470588 |
NA | Z1853 | unknown protein encoded by prophage CP-933C | chromosome | CDS | 1690861 | 357 | + | 0.551821 |
NA | Z1199 | unknown in IS | chromosome | CDS | 1120993 | 327 | - | 0.519878 |
NA | Z2254 | partial H repeat-associated protein of Rhs element | chromosome | CDS | 2037265 | 180 | - | 0.377778 |
NA | Z5878 | putative integrase | chromosome | CDS | 5377177 | 1950 | + | 0.462564 |
NA | Z1444 | putative serine/threonine kinase encoded by bacteriophage BP-933W | chromosome | CDS | 1340932 | 1047 | - | 0.354346 |
NA | Z5088 | unknown protein encoded by IS911 within prophage CP-933L | chromosome | CDS | 4651322 | 351 | + | 0.501424 |
NA | Z2253 | H repeat-associated protein of Rhs element | chromosome | CDS | 2036554 | 612 | - | 0.416667 |
NA | Z5880 | putative transposase | chromosome | CDS | 5379892 | 648 | + | 0.541667 |
NA | Z1802 | unknown protein encoded by prophage CP-933N | chromosome | CDS | 1648245 | 564 | + | 0.542553 |
NA | Z2074 | putative IS encoded protein within CP-933O | chromosome | CDS | 1871964 | 327 | - | 0.538226 |
NA | Z3943 | hypothetical protein | chromosome | CDS | 3563184 | 1326 | - | 0.313726 |
NA | Z4336 | unknown protein encoded by ISEc8 | chromosome | CDS | 3938092 | 348 | + | 0.586207 |
NA | Z1131 | unknown protein encoded in ISEc8 | chromosome | CDS | 1070093 | 1539 | - | 0.584795 |
NA | Z0067 | ATP-dependent helicase HepA | chromosome | CDS | 65291 | 2907 | - | 0.550052 |
NA | Z2562 | putative transposase (partial) | chromosome | CDS | 2274033 | 252 | + | 0.492063 |
NA | Z1602 | unknown in ISEc8 | chromosome | CDS | 1488312 | 363 | - | 0.53719 |
NA | Z1134 | unknown in IS600 | chromosome | CDS | 1072932 | 819 | + | 0.514042 |
NA | Z2791 | hypothetical protein | chromosome | CDS | 2516205 | 408 | + | 0.541667 |
NA | Z3759 | DNA replication initiation factor | chromosome | CDS | 3404054 | 747 | - | 0.53012 |
NA | Z3923 | hypothetical protein | chromosome | CDS | 3550606 | 207 | + | 0.52657 |
NA | Z1160 | unknown in ISEc8 | chromosome | CDS | 1089768 | 351 | + | 0.529915 |
NA | Z1845 | putative single stranded DNA-binding protein of prophage CP-933C | chromosome | CDS | 1685186 | 411 | + | 0.586375 |
NA | Z0365 | unknown protein encoded in ISEc8 | chromosome | CDS | 345429 | 402 | + | 0.514925 |
NA | Z4193 | type III secretion apparatus protein | chromosome | CDS | 3794764 | 336 | - | 0.369048 |
NA | Z1863 | putative phosphohydrolase | chromosome | CDS | 1699525 | 462 | - | 0.504329 |
NA | Z3299 | unknown protein in IS629 | chromosome | CDS | 2961936 | 327 | - | 0.541284 |
NA | Z2982 | unknown protein of IS629 encoded within prophage CP-933T | chromosome | CDS | 2679499 | 327 | - | 0.53211 |
NA | Z5815 | putative transposase | chromosome | CDS | 5311757 | 417 | - | 0.46283 |
NA | Z4799 | putative DNA processing protein | chromosome | CDS | 4358731 | 1296 | - | 0.503086 |
NA | Z3024 | hypothetical protein | chromosome | CDS | 2712198 | 279 | + | 0.462366 |
NA | Z3922 | putative transposase | chromosome | CDS | 3550280 | 327 | + | 0.541284 |
NA | Z1570 | unknown protein encoded in ISEc8 | chromosome | CDS | 1465700 | 1539 | - | 0.584795 |
NA | Z4317 | unknown protein encoded by ISEc8 | chromosome | CDS | 3922839 | 1449 | + | 0.567288 |
NA | Z3945 | hypothetical protein | chromosome | CDS | 3564664 | 1044 | - | 0.347701 |
NA | Z2375 | orf; hypothetical protein in IS629 within prophage CP-933R | chromosome | CDS | 2142020 | 327 | + | 0.541284 |
NA | Z5890 | partial putative integrase | chromosome | CDS | 5387445 | 906 | + | 0.481236 |
NA | Z2060 | putative DNA adenine methyltransferase encoded by prophage CP-933O | chromosome | CDS | 1864783 | 1059 | + | 0.534467 |
NA | Z2111 | putative transposase encoded within prophage CP-933O | chromosome | CDS | 1896975 | 648 | + | 0.541667 |
NA | Z2429 | unknown protein in IS629 | chromosome | CDS | 2176744 | 327 | + | 0.541284 |
NA | Z4334 | IS629 transposase | chromosome | CDS | 3936688 | 648 | - | 0.541667 |
NA | Z3155 | unknown protein encoded by ISEc8 | chromosome | CDS | 2812337 | 348 | + | 0.583333 |
NA | Z1158 | unknown in ISEc8 | chromosome | CDS | 1088541 | 486 | - | 0.561728 |
NA | Z2771 | putative excinuclease subunit | chromosome | CDS | 2498230 | 888 | + | 0.513514 |
NA | Z1639 | unknown in IS | chromosome | CDS | 1516600 | 327 | - | 0.519878 |
NA | Z1589 | unknown in IS | chromosome | CDS | 1479410 | 342 | - | 0.461988 |
NA | Z3348 | unknown protein encoded within prophage CP-933V | chromosome | CDS | 2998872 | 432 | - | 0.421296 |
NA | Z1448 | regulatory protein Cro of bacteriophage BP-933W | chromosome | CDS | 1343689 | 228 | + | 0.421053 |
NA | Z1843 | unknown protein encoded by prophage CP-933C | chromosome | CDS | 1683407 | 1161 | + | 0.540913 |
NA | Z2894 | exodeoxyribonuclease X | chromosome | CDS | 2603158 | 663 | + | 0.518854 |
NA | Z1597 | unknown in ISEc8 | chromosome | CDS | 1484148 | 486 | - | 0.561728 |
NA | Z4064 | hypothetical protein | chromosome | CDS | 3666119 | 924 | - | 0.520563 |
NA | Z5899 | putative ATP-dependent helicase | chromosome | CDS | 5403784 | 2859 | + | 0.501924 |
NA | Z5491 | orf; hypothetical protein in IS (partial) | chromosome | CDS | 5002429 | 186 | - | 0.521505 |
NA | Z5885 | putative resolvase | chromosome | CDS | 5383211 | 576 | + | 0.520833 |
NA | Z2130 | putative IS encoded protein encoded within prophage CP-933O | chromosome | CDS | 1907373 | 1539 | + | 0.584795 |
NA | Z1958 | unknown in IS629 | chromosome | CDS | 1777800 | 327 | - | 0.525994 |
NA | Z3561 | putative regulator | chromosome | CDS | 3214760 | 543 | - | 0.535912 |
NA | Z2078 | putative transposase within CP-933O | chromosome | CDS | 1874668 | 423 | + | 0.51773 |
NA | Z2396 | DNA replication protein DnaC | chromosome | CDS | 2155159 | 747 | - | 0.54083 |
NA | Z4803 | putative ATP-dependent DNA helicase (together with adjacent 3 orfs) | chromosome | CDS | 4361449 | 609 | - | 0.505747 |
NA | Z1357 | unknown protein encoded by cryptic prophage CP-933M | chromosome | CDS | 1274037 | 564 | + | 0.547872 |
NA | Z6069 | DNA replication protein DnaC | chromosome | CDS | 2321254 | 741 | - | 0.54386 |
NA | Z2806 | putative transposase | chromosome | CDS | 2529766 | 888 | + | 0.539414 |
NA | Z1120 | putative P4-family integrase | chromosome | CDS | 1058795 | 1203 | + | 0.489609 |
NA | Z3333 | unknown protein encoded within prophage CP-933V | chromosome | CDS | 2988549 | 564 | - | 0.544326 |
NA | Z2072 | putative IS encoded proteinen coded by prophage CP-933O | chromosome | CDS | 1870229 | 348 | + | 0.586207 |
NA | Z1934 | putative transposase for IS629 | chromosome | CDS | 1755359 | 648 | + | 0.540123 |
NA | Z1928 | unknown protein encoded by ISEc8 in prophage CP-933X | chromosome | CDS | 1749317 | 93 | + | 0.569892 |
NA | Z1338 | DNA replication protein DnaC | chromosome | CDS | 1260216 | 747 | + | 0.519411 |
NA | Z1161 | unknown in ISEc8 | chromosome | CDS | 1090149 | 1614 | + | 0.542751 |
NA | Z5097 | unknown protein encoded by ISEc8 within prophage CP-933L | chromosome | CDS | 4655440 | 348 | + | 0.586207 |
NA | Z5098 | unknown protein encoded by ISEc8 within prophage CP-933L | chromosome | CDS | 4655837 | 1539 | + | 0.584795 |
NA | Z2082 | putative transposase within CP-933O; partial | chromosome | CDS | 1877451 | 882 | + | 0.547619 |
NA | Z1562 | unknown in IS1N | chromosome | CDS | 1458104 | 438 | + | 0.468037 |
NA | Z1957 | transposase for IS629 | chromosome | CDS | 1776913 | 891 | - | 0.530864 |
NA | Z1571 | unknown protein encoded in ISEc8 | chromosome | CDS | 1467288 | 348 | - | 0.583333 |
NA | Z4337 | unknown protein encoded by ISEc8 | chromosome | CDS | 3938489 | 1539 | + | 0.584795 |
NA | Z2561 | putative transposase (partial) | chromosome | CDS | 2273635 | 165 | + | 0.557576 |
NA | Z0366 | unknown protein encoded in ISEc8 | chromosome | CDS | 345827 | 348 | + | 0.586207 |
NA | Z1927 | unknown protein encoded by ISEc8 in prophage CP-933X | chromosome | CDS | 1748655 | 459 | + | 0.511983 |
NA | Z5879 | orf; hypothetical protein in IS | chromosome | CDS | 5379326 | 327 | + | 0.541284 |
NA | Z6061 | putative endonuclease encoded by cryptic prophage CP-933P | chromosome | CDS | 2316917 | 360 | - | 0.516667 |
NA | Z3622 | putative resolvase | chromosome | CDS | 3270707 | 627 | + | 0.475279 |
NA | Z2563 | putative transposase (partial) | chromosome | CDS | 2274294 | 183 | + | 0.513661 |
NA | Z1207 | partial transposase | chromosome | CDS | 1129534 | 249 | - | 0.506024 |
NA | Z1123 | unknown in IS1N | chromosome | CDS | 1062497 | 438 | + | 0.468037 |
NA | Z0271 | hypothetical protein | chromosome | CDS | 272653 | 1137 | + | 0.417766 |
NA | Z1132 | unknown protein encoded in ISEc8 | chromosome | CDS | 1071681 | 348 | - | 0.583333 |
NA | Z1561 | hypothetical protein | chromosome | CDS | 1457976 | 102 | + | 0.470588 |
NA | Z3297 | putative transposase for IS629 | chromosome | CDS | 2961049 | 891 | - | 0.540965 |
NA | Z1601 | unknown in ISEc8 | chromosome | CDS | 1487373 | 858 | - | 0.541958 |
NA | Z1198 | putative transposase | chromosome | CDS | 1120106 | 888 | - | 0.533784 |
NA | Z4318 | hypothetical protein | chromosome | CDS | 3924088 | 945 | - | 0.495238 |
NA | Z2079 | putative IS encoded protein within CP-933O | chromosome | CDS | 1875212 | 411 | - | 0.554745 |
NA | Z2981 | IS629 transposase encoded within prophage CP-933T | chromosome | CDS | 2678810 | 690 | - | 0.54058 |
NA | Z1632 | IS1 protein InsB | chromosome | CDS | 1511474 | 504 | - | 0.531746 |
NA | Z2084 | putative integrase within CP-933O; partial | chromosome | CDS | 1878802 | 468 | - | 0.463675 |
NA | Z6015 | unknown protein encoded in ISEc8 | chromosome | CDS | 2278037 | 348 | + | 0.586207 |
NA | Z1826 | putative IS encoded protein | chromosome | CDS | 1671089 | 162 | - | 0.524691 |
NA | Z6016 | unknown protein encoded in ISEc8 | chromosome | CDS | 2278434 | 1539 | + | 0.584795 |
NA | Z2081 | putative IS encoded protein within CP-933O | chromosome | CDS | 1876695 | 348 | - | 0.586207 |
NA | Z4340 | unknown protein encoded by ISEc8 | chromosome | CDS | 3940813 | 1404 | + | 0.551994 |
NA | Z1647 | partial transposase | chromosome | CDS | 1525140 | 249 | - | 0.506024 |
NA | Z1772 | unknown protein encoded by prophage CP-933N | chromosome | CDS | 1630668 | 426 | + | 0.528169 |
NA | Z1657 | putative DNA repair protein, RADC family | chromosome | CDS | 1536985 | 477 | + | 0.584906 |
NA | Z0946 | putative integrase encoded by prophage CP-933K; partial | chromosome | CDS | 892845 | 864 | - | 0.450231 |
NA | Z5096 | unknown protein encoded by ISEc8 within prophage CP-933L | chromosome | CDS | 4655042 | 402 | + | 0.514925 |
NA | Z5428 | hypothetical protein | chromosome | CDS | 4944085 | 993 | + | 0.365559 |
NA | Z1208 | unknown in putative ISEc8 | chromosome | CDS | 1129836 | 426 | + | 0.514085 |
NA | Z6046 | putative terminase subunit encoded by cryptic prophage CP-933P | chromosome | CDS | 2307933 | 564 | - | 0.549645 |
NA | Z4502 | orf; hypothetical protein in IS629 | chromosome | CDS | 4100476 | 327 | + | 0.541284 |
NA | Z3095 | putative transposase encoded within prophage CP-933U | chromosome | CDS | 2761893 | 867 | + | 0.538639 |
NA | Z1785 | putative endodeoxyribonuclease of prophage CP-933N | chromosome | CDS | 1637932 | 372 | + | 0.532258 |
NA | Z3154 | unknown protein encoded by ISEc8 | chromosome | CDS | 2811939 | 402 | + | 0.512438 |
NA | Z4200 | hypothetical protein | chromosome | CDS | 3802780 | 1029 | - | 0.391642 |
NA | Z1929 | unknown protein encoded by ISEc8 in prophage CP-933X | chromosome | CDS | 1749459 | 1539 | + | 0.584795 |
NA | Z6022 | putative integrase fragment | chromosome | CDS | 2282949 | 702 | + | 0.490029 |
NA | Z5114 | hypothetical protein | chromosome | CDS | 4671890 | 384 | + | 0.333333 |
NA | Z1661 | unknown protein encoded by IS629 | chromosome | CDS | 1539472 | 327 | - | 0.519878 |
NA | Z3664 | putative virulence protein | chromosome | CDS | 3315873 | 1209 | - | 0.514475 |
NA | Z2057 | putative endonuclease of prophage CP-933O | chromosome | CDS | 1863295 | 360 | + | 0.5 |
NA | Z4315 | unknown protein encoded by ISEc8 | chromosome | CDS | 3921801 | 675 | + | 0.485926 |
NA | Z4802 | putative ATP-dependent DNA helicase (together with adjacent 3 orfs) | chromosome | CDS | 4361063 | 390 | - | 0.482051 |
NA | Z2389 | putative DNA modification methyltransferase encoded within prophage CP-933R | chromosome | CDS | 2151025 | 1152 | - | 0.364583 |
NA | Z4316 | unknown protein encoded by ISEc8 | chromosome | CDS | 3922472 | 348 | + | 0.568965 |
NA | Z1573 | unknown in IS600 | chromosome | CDS | 1468539 | 819 | + | 0.514042 |
NA | Z3924 | partial putative transposase | chromosome | CDS | 3550847 | 219 | + | 0.552511 |
NA | Z2430 | putative transposase for IS629 | chromosome | CDS | 2177310 | 648 | + | 0.541667 |
NA | Z4503 | putative transposase | chromosome | CDS | 4101042 | 648 | + | 0.541667 |
NA | Z4314 | unknown protein encoded by ISEc8 | chromosome | CDS | 3920927 | 786 | - | 0.562341 |
NA | Z0322 | unknown protein encoded by IS2 | chromosome | CDS | 309886 | 366 | - | 0.483607 |
NA | Z1599 | unknown in ISEc8 | chromosome | CDS | 1485375 | 351 | + | 0.529915 |
NA | Z2851 | putative enzyme | chromosome | CDS | 2568358 | 1911 | - | 0.554683 |
NA | Z0857 | putative receptor | chromosome | CDS | 816079 | 1074 | + | 0.422719 |
NA | Z1600 | unknown in ISEc8 | chromosome | CDS | 1485756 | 1614 | + | 0.542751 |
NA | Z1933 | unknown in IS629 | chromosome | CDS | 1754793 | 327 | + | 0.541284 |
NA | Z1572 | partial putative transposase | chromosome | CDS | 1468088 | 312 | - | 0.487179 |
NA | Z1500 | unknown protein encoded by bacteriophage BP-933W | chromosome | CDS | 1389734 | 396 | - | 0.467172 |
NA | Z2365 | putative DNA packaging protein of prophage CP-933R; terminase small subunit | chromosome | CDS | 2137613 | 510 | - | 0.468627 |
NA | Z1202 | hypothetical protein | chromosome | CDS | 1123332 | 2136 | + | 0.416667 |
NA | Z2092 | unknown protein encoded within prophage CP-933O | chromosome | CDS | 1883871 | 426 | + | 0.530516 |
NA | Z4330 | putative transposase | chromosome | CDS | 3933017 | 846 | + | 0.49409 |
NA | Z4335 | unknown protein in IS629 | chromosome | CDS | 3937575 | 327 | - | 0.541284 |
NA | Z1150 | unknown in IS | chromosome | CDS | 1083803 | 342 | - | 0.461988 |
NA | Z2804 | unknown protein encoded within IS629 | chromosome | CDS | 2529440 | 327 | + | 0.53211 |
NA | Z1871 | unknown protein encoded by prophage CP-933X | chromosome | CDS | 1706125 | 1527 | + | 0.355599 |
NA | Z2127 | putative IS encoded protein encoded within prophage CP-933O | chromosome | CDS | 1906763 | 561 | + | 0.57754 |
NA | Z0395 | hypothetical protein | chromosome | CDS | 371783 | 384 | - | 0.416667 |
NA | Z1162 | unknown in ISEc8 | chromosome | CDS | 1091766 | 858 | - | 0.541958 |
NA | Z4375 | hypothetical protein | chromosome | CDS | 3975492 | 483 | - | 0.52795 |
NA | Z0328 | unknown protein encoded in prophage CP-933I | chromosome | CDS | 313449 | 633 | + | 0.2891 |
NA | Z0394 | hypothetical protein | chromosome | CDS | 371604 | 159 | - | 0.446541 |
NA | Z1323 | putative integrase for cryptic prophage CP-933M | chromosome | CDS | 1250521 | 1020 | - | 0.445098 |
NA | Z1222 | unknown in IS | chromosome | CDS | 1143866 | 327 | - | 0.519878 |
NA | Z1882 | putative DNA packaging protein of prophage CP-933X | chromosome | CDS | 1714058 | 546 | + | 0.525641 |
NA | Z6017 | putative transposase fragment | chromosome | CDS | 2280257 | 348 | + | 0.545977 |
NA | Z4338 | unknown protein encoded by ISEc8 | chromosome | CDS | 3940250 | 351 | + | 0.524217 |
NA | Z5902 | putative helicase | chromosome | CDS | 5417917 | 2115 | + | 0.498345 |
NA | Z5089 | putative transposase | chromosome | CDS | 4651861 | 678 | + | 0.517699 |
NA | Z1344 | putative endonuclease of cryptic prophage CP-933M | chromosome | CDS | 1265578 | 375 | + | 0.522667 |
NA | Z0700 | putative receptor | chromosome | CDS | 664295 | 1137 | - | 0.414248 |
NA | Z1163 | unknown in ISEc8 | chromosome | CDS | 1092705 | 363 | - | 0.53719 |
NA | Z0854 | hypothetical protein | chromosome | CDS | 816295 | 858 | + | 0.432401 |
NA | Z3925 | partial putative transposase | chromosome | CDS | 3551085 | 411 | + | 0.530414 |
NA | Z3093 | unknown in IS629 encoded within prophage CP-933U | chromosome | CDS | 2761545 | 327 | + | 0.541284 |
NA | Z1217 | putative DNA repair protein, RADC family | chromosome | CDS | 1141379 | 477 | + | 0.589099 |
NA | Z1648 | unknown in putative ISEc8 | chromosome | CDS | 1525442 | 426 | + | 0.511737 |
NA | Z5028 | hypothetical protein | chromosome | CDS | 4587466 | 582 | + | 0.369416 |
NA | Z2376 | putative IS629 transposase within prophage CP-933R | chromosome | CDS | 2142587 | 648 | + | 0.541667 |
NA | Z0275 | hypothetical protein | chromosome | CDS | 276198 | 1173 | + | 0.375959 |
NA | Z1159 | unknown in ISEc8 | chromosome | CDS | 1089346 | 426 | + | 0.485915 |
NA | Z1598 | unknown in ISEc8 | chromosome | CDS | 1484953 | 426 | + | 0.485915 |
NA | Z2987 | putative tail fiber component of prophage CP-933T | chromosome | CDS | 2682399 | 2091 | - | 0.559541 |
NA | Z3156 | unknown protein encoded by ISEc8 | chromosome | CDS | 2812734 | 1539 | + | 0.584795 |
NA | Z3115 | putative endonuclease encoded within prophage CP-933U | chromosome | CDS | 2775266 | 360 | - | 0.536111 |
NA | Z1133 | partial putative transposase | chromosome | CDS | 1072481 | 312 | - | 0.487179 |
NA | Z5117 | hypothetical protein | chromosome | CDS | 4673888 | 276 | - | 0.318841 |
NA | Z1192 | IS1 protein InsB | chromosome | CDS | 1115867 | 504 | - | 0.531746 |
NA | Z1642 | hypothetical protein | chromosome | CDS | 1518939 | 2136 | + | 0.416667 |
NA | Z1835 | putative integrase of prophage CP-933C | chromosome | CDS | 1678706 | 1251 | + | 0.513189 |
NA | Z5816 | putative virulence protein | chromosome | CDS | 5312196 | 1209 | + | 0.514475 |
NA | Z1825 | insertion sequence 2 OrfB protein | chromosome | CDS | 1670022 | 906 | - | 0.548565 |
NA | Z1559 | putative P4-family integrase | chromosome | CDS | 1454402 | 1203 | + | 0.489609 |
NA | Z1638 | putative transposase | chromosome | CDS | 1515713 | 888 | - | 0.533784 |
NA | Z6019 | putative transposase fragment | chromosome | CDS | 2280634 | 258 | + | 0.511628 |
NA | Z1866 | putative integrase of prophage CP-933X | chromosome | CDS | 1702185 | 1143 | - | 0.433946 |
NA | Z5200 | hypothetical protein | chromosome | CDS | 4743737 | 1989 | - | 0.363499 |
NA | Z1475 | putative terminase small subunit of bacteriophage BP-933W | chromosome | CDS | 1359603 | 807 | + | 0.486989 |
NA | Z6021 | hypothetical protein | chromosome | CDS | 2281573 | 912 | - | 0.379386 |
NA | Z3161 | unknown protein encoded by IS629 | chromosome | CDS | 2818240 | 327 | + | 0.525994 |
ada | Z3471 | O6-methylguanine-DNA methyltransferase; transcription activator/repressor | chromosome | CDS | 3113597 | 1065 | - | 0.569014 |
alkA | Z3237 | 3-methyl-adenine DNA glycosylase II, inducible | chromosome | CDS | 2892749 | 849 | - | 0.551237 |
alkB | Z3470 | DNA repair system specific for alkylated DNA | chromosome | CDS | 3112947 | 651 | - | 0.525346 |
dam | Z4740 | DNA adenine methylase | chromosome | CDS | 4294495 | 837 | - | 0.491039 |
dbpA | Z2417 | ATP-dependent RNA helicase | chromosome | CDS | 2166810 | 1374 | - | 0.517467 |
dcm | Z3054 | DNA cytosine methylase | chromosome | CDS | 2730659 | 1419 | - | 0.522199 |
deaD | Z4523 | inducible ATP-independent RNA helicase | chromosome | CDS | 4115684 | 1941 | - | 0.548686 |
dinJ | Z0285 | damage-inducible protein J | chromosome | CDS | 284208 | 261 | - | 0.475096 |
dinP | Z0292 | DNA polymerase IV | chromosome | CDS | 288785 | 1056 | + | 0.538826 |
dnaA | Z5193 | chromosomal replication initiation protein | chromosome | CDS | 4737542 | 1404 | - | 0.536325 |
dnaB | Z5650 | replicative DNA helicase | chromosome | CDS | 5147453 | 1416 | + | 0.533898 |
dnaC | Z5961 | DNA replication protein DnaC | chromosome | CDS | 5488590 | 738 | - | 0.509485 |
dnaE | Z0196 | DNA polymerase III subunit alpha | chromosome | CDS | 208470 | 3483 | + | 0.549526 |
dnaG | Z4419 | DNA primase | chromosome | CDS | 4017953 | 1746 | + | 0.521191 |
dnaN | Z5192 | DNA polymerase III subunit beta | chromosome | CDS | 4736437 | 1101 | - | 0.545867 |
dnaQ | Z0241 | DNA polymerase III subunit epsilon | chromosome | CDS | 239618 | 732 | + | 0.510929 |
dnaX | Z0587 | DNA polymerase III subunits gamma and tau | chromosome | CDS | 557990 | 1932 | + | 0.575569 |
endA | Z4290 | DNA-specific endonuclease I | chromosome | CDS | 3899154 | 708 | + | 0.54661 |
fimB | Z5910 | recombinase involved in phase variation; regulator for fimA | chromosome | CDS | 5425868 | 603 | + | 0.431177 |
fimE | Z5911 | recombinase involved in phase variation; regulator for fimA | chromosome | CDS | 5426948 | 597 | + | 0.467337 |
fis | Z4621 | DNA-binding protein Fis | chromosome | CDS | 4213449 | 297 | + | 0.47138 |
gyrA | Z3484 | DNA gyrase subunit A | chromosome | CDS | 3133832 | 2628 | - | 0.540715 |
gyrB | Z5190 | DNA gyrase subunit B | chromosome | CDS | 4732921 | 2415 | - | 0.549068 |
helD | Z1313 | DNA helicase IV | chromosome | CDS | 1243165 | 2055 | + | 0.527981 |
himA | Z2741 | integration host factor alpha subunit | chromosome | CDS | 2470169 | 300 | - | 0.496667 |
himD | Z1258 | integration host factor beta subunit | chromosome | CDS | 1182694 | 285 | + | 0.491228 |
holA | Z0787 | DNA polymerase III subunit delta | chromosome | CDS | 751713 | 1032 | - | 0.523256 |
holB | Z1738 | DNA polymerase III subunit delta | chromosome | CDS | 1599943 | 1005 | + | 0.546269 |
holC | Z5871 | DNA polymerase III subunit chi | chromosome | CDS | 5369237 | 444 | - | 0.542793 |
holD | Z5973 | DNA polymerase III subunit psi | chromosome | CDS | 5495843 | 414 | + | 0.577295 |
hrpA | Z2313 | helicase, ATP-dependent | chromosome | CDS | 2085685 | 3846 | - | 0.537701 |
hrpB | Z0159 | helicase, ATP-dependent | chromosome | CDS | 166383 | 2475 | + | 0.565657 |
hupA | Z5576 | DNA-binding protein HU-alpha (HU-2) | chromosome | CDS | 5077852 | 273 | + | 0.483516 |
hupB | Z0547 | DNA-binding protein HU-beta, NS1 (HU-1) | chromosome | CDS | 527505 | 273 | + | 0.494505 |
intC | Z3613 | putative prophage integrase | chromosome | CDS | 3263064 | 1194 | + | 0.474874 |
intH | Z0307 | putative integrase for prophage CP-933H | chromosome | CDS | 300073 | 975 | - | 0.474872 |
intL | Z5087 | putative integrase for prophage 933L and the LEE pathogenicity island | chromosome | CDS | 4650042 | 1182 | + | 0.476311 |
intN | Z1764 | partial integrase for prophage CP-933N | chromosome | CDS | 1626722 | 1119 | - | 0.453083 |
intO | Z2036 | putative integrase for prophage CP-933O | chromosome | CDS | 1849488 | 1131 | - | 0.463307 |
intP_1 | Z2566 | integrase fragment, cryptic prophage CP-933P | chromosome | CDS | 2329466 | 171 | + | 0.45614 |
intP_2 | Z2568 | integrase fragment, cryptic prophage CP-933P | chromosome | CDS | 2329684 | 489 | + | 0.406953 |
intR | Z2415 | putative integrase for prophage CP-933R | chromosome | CDS | 2164459 | 1236 | + | 0.438511 |
intT | Z2966 | integrase for prophage CP-933T | chromosome | CDS | 2668339 | 1002 | - | 0.446108 |
intU | Z3130 | putative integrase for prophage CP-933U | chromosome | CDS | 2787326 | 1023 | + | 0.434018 |
intV | Z3375 | putative integrase for prophage CP-933V | chromosome | CDS | 3013728 | 1287 | + | 0.433566 |
intW | Z1424 | integrase for bacteriophage BP-933W | chromosome | CDS | 1330857 | 1335 | - | 0.47191 |
lig | Z3677 | DNA ligase | chromosome | CDS | 3322386 | 2016 | - | 0.542659 |
mfd | Z1754 | transcription-repair coupling factor; mutation frequency decline | chromosome | CDS | 1614739 | 3447 | - | 0.549173 |
mutH | Z4149 | DNA mismatch repair protein | chromosome | CDS | 3759360 | 690 | + | 0.536232 |
mutL | Z5777 | DNA mismatch repair protein | chromosome | CDS | 5281122 | 1848 | + | 0.564394 |
mutM | Z5059 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 4623185 | 810 | - | 0.538272 |
mutS | Z4043 | DNA mismatch repair protein | chromosome | CDS | 3648075 | 2562 | + | 0.563622 |
mutT | Z0109 | 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions | chromosome | CDS | 115650 | 399 | + | 0.483709 |
mutY | Z4306 | adenine glycosylase; G.C --> T.A transversions | chromosome | CDS | 3911919 | 1053 | + | 0.554606 |
nei | Z0865 | endonuclease VIII and DNA N-glycosylase with an AP lyase activity | chromosome | CDS | 824235 | 792 | + | 0.521465 |
nfi | Z5574 | endonuclease V (deoxyinosine 3'endoduclease) | chromosome | CDS | 5076361 | 672 | + | 0.584821 |
nfo | Z3416 | endonuclease IV | chromosome | CDS | 3057087 | 858 | + | 0.524476 |
nth | Z2644 | endonuclease III; specific for apurinic and/or apyrimidinic sites | chromosome | CDS | 2386442 | 636 | + | 0.488994 |
ntpA | Z2917 | dATP pyrophosphohydrolase | chromosome | CDS | 2625318 | 453 | - | 0.523179 |
nudC | Z5571 | NADH pyrophosphatase | chromosome | CDS | 5074474 | 774 | + | 0.5323 |
ogt | Z2432 | O-6-alkylguanine-DNA/cysteine-protein methyltransferase | chromosome | CDS | 2178771 | 516 | + | 0.531008 |
parC | Z4373 | DNA topoisomerase IV subunit A | chromosome | CDS | 3971380 | 2259 | - | 0.546702 |
parE | Z4387 | DNA topoisomerase IV subunit B | chromosome | CDS | 3986913 | 1893 | - | 0.538827 |
phrB | Z0859 | deoxyribodipyrimidine photolyase (photoreactivation) | chromosome | CDS | 817807 | 1419 | + | 0.536293 |
pinH | Z0318 | DNA invertase from prophage CP-933H | chromosome | CDS | 306856 | 591 | + | 0.497462 |
polA | Z5398 | DNA polymerase I | chromosome | CDS | 4911682 | 2787 | + | 0.520273 |
polB | Z0068 | DNA polymerase II | chromosome | CDS | 68361 | 2352 | - | 0.555697 |
priA | Z5482 | primosome assembly protein PriA | chromosome | CDS | 4994868 | 2199 | - | 0.56935 |
priB | Z5810 | primosomal replication protein N | chromosome | CDS | 5309232 | 315 | + | 0.51746 |
priC | Z0584 | primosomal replication protein N'' | chromosome | CDS | 556183 | 528 | - | 0.581439 |
radC | Z5062 | DNA repair protein RadC | chromosome | CDS | 4624733 | 675 | - | 0.477037 |
rdgC | Z0492 | recombination associated protein | chromosome | CDS | 471196 | 912 | - | 0.514254 |
recA | Z4002 | recombinase A | chromosome | CDS | 3613927 | 1062 | - | 0.53484 |
recB | Z4137 | DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease | chromosome | CDS | 3742159 | 3543 | - | 0.544736 |
recC | Z4139 | DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease | chromosome | CDS | 3748758 | 3369 | - | 0.538736 |
recD | Z4136 | DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease | chromosome | CDS | 3740333 | 1827 | - | 0.550629 |
recF | Z5191 | recombination protein F | chromosome | CDS | 4735364 | 1074 | - | 0.547486 |
recG | Z5078 | DNA helicase, resolution of Holliday junctions, branch migration | chromosome | CDS | 4638022 | 2115 | + | 0.568794 |
recJ | Z4230 | ssDNA exonuclease, 5' --> 3' specific | chromosome | CDS | 3841830 | 1734 | - | 0.569781 |
recN | Z3909 | protein used in recombination and DNA repair | chromosome | CDS | 3541653 | 1662 | + | 0.519856 |
recO | Z3846 | DNA repair protein RecO | chromosome | CDS | 3491964 | 729 | - | 0.537723 |
recQ | Z5343 | ATP-dependent DNA helicase | chromosome | CDS | 4870932 | 1836 | + | 0.550109 |
recR | Z0589 | recombination protein RecR | chromosome | CDS | 560303 | 606 | + | 0.572607 |
recT | Z2410 | recombinase, DNA renaturation protein encoded by prophage CP-933R | chromosome | CDS | 2162902 | 810 | + | 0.461728 |
rep | Z5288 | rep helicase, a single-stranded DNA dependent ATPase | chromosome | CDS | 4823068 | 2022 | + | 0.534125 |
rhlB | Z5290 | ATP-dependent RNA helicase | chromosome | CDS | 4826756 | 1266 | - | 0.525276 |
rhlE | Z1017 | putative ATP-dependent RNA helicase | chromosome | CDS | 954892 | 1368 | + | 0.562865 |
rnhA | Z0239 | ribonuclease H | chromosome | CDS | 239086 | 468 | - | 0.50641 |
rnhB | Z0195 | ribonuclease HII | chromosome | CDS | 207837 | 597 | + | 0.566164 |
rnt | Z2671 | ribonuclease T | chromosome | CDS | 2403267 | 648 | + | 0.544753 |
rus | Z1873 | endodeoxyribonuclease RUS (Holliday junction resolvase) of prophage CP-933X | chromosome | CDS | 1709058 | 363 | + | 0.53719 |
ruvA | Z2913 | Holliday junction DNA helicase motor protein | chromosome | CDS | 2622503 | 612 | - | 0.534314 |
ruvB | Z2912 | Holliday junction DNA helicase RuvB | chromosome | CDS | 2621484 | 1011 | - | 0.526212 |
ruvC | Z2915 | Holliday junction resolvase | chromosome | CDS | 2623993 | 522 | - | 0.559387 |
sbcB | Z3173 | exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase | chromosome | CDS | 2825476 | 1428 | + | 0.498599 |
sbcC | Z0495 | ATP-dependent dsDNA exonuclease | chromosome | CDS | 474593 | 3144 | - | 0.542303 |
sbcD | Z0496 | ATP-dependent dsDNA exonuclease | chromosome | CDS | 477733 | 1203 | - | 0.532003 |
sbmC | Z3170 | SbmC protein | chromosome | CDS | 2823508 | 474 | - | 0.470464 |
seqA | Z0836 | negative modulator of initiation of replication | chromosome | CDS | 792794 | 546 | + | 0.492674 |
smf | Z4656 | hypothetical protein | chromosome | CDS | 4234670 | 1125 | - | 0.508444 |
srmB | Z3859 | ATP-dependent RNA helicase | chromosome | CDS | 3503108 | 1335 | + | 0.546067 |
ssb | Z5658 | single-strand DNA-binding protein | chromosome | CDS | 5157257 | 537 | + | 0.579143 |
tag | Z4974 | 3-methyladenine DNA glycosylase I | chromosome | CDS | 4527895 | 564 | + | 0.508865 |
tatD | Z5361 | hypothetical protein | chromosome | CDS | 4888615 | 795 | + | 0.542138 |
topA | Z2536 | DNA topoisomerase I | chromosome | CDS | 2252824 | 2598 | - | 0.520015 |
topB | Z2796 | DNA topoisomerase III | chromosome | CDS | 2519714 | 1962 | - | 0.551988 |
tra8_2 | Z2993 | IS30 transposase encoded within prophage CP-933T | chromosome | CDS | 2687188 | 1191 | - | 0.459278 |
tra8_3 | Z3936 | IS30 transposase | chromosome | CDS | 3557855 | 756 | + | 0.466931 |
umuC | Z1947 | DNA polymerase IV | chromosome | CDS | 1764079 | 1269 | + | 0.508274 |
ung | Z3864 | uracil-DNA glycosylase | chromosome | CDS | 3506790 | 690 | + | 0.527536 |
uvrA | Z5657 | excinuclease ABC subunit A | chromosome | CDS | 5154180 | 2823 | - | 0.558271 |
uvrB | Z0998 | excinuclease ABC subunit B | chromosome | CDS | 937545 | 2022 | + | 0.530168 |
uvrC | Z3001 | excinuclease ABC subunit C | chromosome | CDS | 2690356 | 1767 | - | 0.517827 |
uvrD | Z5330 | DNA-dependent ATPase I and helicase II | chromosome | CDS | 4860404 | 2163 | + | 0.577901 |
vsr | Z3053 | DNA mismatch endonuclease, patch repair protein | chromosome | CDS | 2730208 | 471 | - | 0.562633 |
waaP | Z5054 | putative LPS biosynthesis enzyme | chromosome | CDS | 4618000 | 807 | - | 0.473358 |
waaY | Z5052 | putative LPS biosynthesis protein | chromosome | CDS | 4616217 | 708 | - | 0.30791 |
wbdQ | Z3196 | GDP-mannose mannosylhydrolase | chromosome | CDS | 2848478 | 510 | - | 0.380392 |
wcaH | Z3215 | GDP-mannose mannosyl hydrolase | chromosome | CDS | 2871329 | 483 | - | 0.556936 |
xerC | Z5328 | tyrosine recombinase | chromosome | CDS | 4858708 | 897 | + | 0.540691 |
xerD | Z4232 | tyrosine recombinase | chromosome | CDS | 3844304 | 897 | - | 0.529543 |
xni | Z4115 | exonuclease IX | chromosome | CDS | 3720663 | 846 | + | 0.524823 |
xseA | Z3773 | exodeoxyribonuclease VII large subunit | chromosome | CDS | 3420210 | 1371 | + | 0.533187 |
xseB | Z0525 | exodeoxyribonuclease VII small subunit | chromosome | CDS | 507156 | 243 | - | 0.555556 |
xthA | Z2781 | exonuclease III | chromosome | CDS | 2507143 | 807 | + | 0.536555 |
yacH | Z0127 | hypothetical protein | chromosome | CDS | 133780 | 1854 | - | 0.539374 |
yafM | Z0288 | hypothetical protein | chromosome | CDS | 285603 | 297 | + | 0.454545 |
ybaV | Z0549 | hypothetical protein | chromosome | CDS | 529992 | 372 | + | 0.545699 |
ybaZ | Z0566 | hypothetical protein | chromosome | CDS | 542050 | 372 | - | 0.543011 |
ybjD | Z1110 | hypothetical protein | chromosome | CDS | 1049208 | 1659 | + | 0.528632 |
ycaJ | Z1238 | putative polynucleotide enzyme | chromosome | CDS | 1158329 | 1344 | + | 0.531994 |
ycfH | Z1739 | hypothetical protein | chromosome | CDS | 1600958 | 798 | + | 0.512531 |
yeaB | Z2856 | hypothetical protein | chromosome | CDS | 2573203 | 579 | + | 0.542314 |
yejH | Z3443 | putative ATP-dependent helicase | chromosome | CDS | 3086831 | 1761 | + | 0.530948 |
yfaO | Z3509 | hypothetical protein | chromosome | CDS | 3165023 | 426 | + | 0.481221 |
yffH | Z3723 | hypothetical protein | chromosome | CDS | 3368861 | 576 | - | 0.482639 |
yfiL | Z3895 | hypothetical protein | chromosome | CDS | 3531289 | 405 | + | 0.446914 |
ygdP | Z4147 | dinucleoside polyphosphate hydrolase | chromosome | CDS | 3758145 | 531 | - | 0.493409 |
ygjF | Z4421 | hypothetical protein | chromosome | CDS | 4021813 | 507 | - | 0.526627 |
yhbQ | Z4516 | hypothetical protein | chromosome | CDS | 4109680 | 303 | + | 0.544554 |
yhdJ | Z4622 | putative methyltransferase | chromosome | CDS | 4213824 | 891 | + | 0.47587 |
yhhF | Z4839 | hypothetical protein | chromosome | CDS | 4390864 | 597 | + | 0.537688 |
yicF | Z5073 | DNA ligase | chromosome | CDS | 4632333 | 1689 | - | 0.527531 |
yjjV | Z5980 | hypothetical protein | chromosome | CDS | 5501665 | 684 | + | 0.555556 |
yqgF | Z4294 | Holliday junction resolvase-like protein | chromosome | CDS | 3902307 | 417 | + | 0.527578 |
yqiE | Z4391 | hypothetical protein | chromosome | CDS | 3990690 | 630 | - | 0.501587 |
yraN | Z4507 | hypothetical protein | chromosome | CDS | 4105108 | 396 | + | 0.545455 |
yrdD | Z4654 | putative DNA topoisomerase | chromosome | CDS | 4233654 | 519 | - | 0.499037 |
yrfE | Z4751 | hypothetical protein | chromosome | CDS | 4305005 | 561 | - | 0.508021 |