Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 173
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli 536, 536 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECP_0157 | 2'-5' RNA ligase | chromosome | CDS | 166950 | 540 | - | 0.562963 |
NA | ECP_3146 | tRNA nucleotidyltransferase | chromosome | CDS | 3313676 | 1239 | + | 0.565779 |
NA | ECP_2607 | 50S ribosomal protein L19 | chromosome | CDS | 2752047 | 348 | - | 0.482759 |
NA | ECP_3387 | 50S ribosomal protein L36 | chromosome | CDS | 3552268 | 117 | - | 0.478632 |
NA | ECP_2608 | tRNA (guanine-N(1)-)-methyltransferase | chromosome | CDS | 2752436 | 768 | - | 0.532552 |
NA | ECP_2617 | outer membrane lipoprotein | chromosome | CDS | 2761357 | 342 | + | 0.497076 |
NA | ECP_3272 | 50S ribosomal protein L27 | chromosome | CDS | 3443165 | 258 | - | 0.503876 |
NA | ECP_2583 | hypothetical tRNA/rRNA methyltransferase YfiF | chromosome | CDS | 2722725 | 1038 | - | 0.563584 |
NA | ECP_3399 | 30S ribosomal protein S17 | chromosome | CDS | 3557964 | 255 | - | 0.47451 |
NA | ECP_4025 | hypothetical protein | chromosome | CDS | 4200208 | 258 | - | 0.395349 |
NA | ECP_3398 | 50S ribosomal protein L14 | chromosome | CDS | 3557428 | 372 | - | 0.510753 |
NA | ECP_1663 | 50S ribosomal protein L20 | chromosome | CDS | 1714179 | 357 | - | 0.487395 |
NA | ECP_3972 | putative ATP-dependent RNA helicase RhlB | chromosome | CDS | 4147282 | 1266 | - | 0.525276 |
NA | ECP_0424 | bacterial transferase hexapeptide | chromosome | CDS | 450905 | 441 | - | 0.45805 |
NA | ECP_4447 | 30S ribosomal protein S18 | chromosome | CDS | 4655368 | 228 | + | 0.526316 |
NA | ECP_0464 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | chromosome | CDS | 492502 | 1071 | + | 0.535948 |
NA | ECP_2657 | alanyl-tRNA synthetase | chromosome | CDS | 2796262 | 2631 | - | 0.538198 |
NA | ECP_3404 | 30S ribosomal protein S19 | chromosome | CDS | 3559898 | 279 | - | 0.491039 |
NA | ECP_4373 | lysyl-tRNA synthetase, heat inducible | chromosome | CDS | 4583671 | 1518 | - | 0.474308 |
NA | ECP_3486 | heat shock protein 15 | chromosome | CDS | 3635673 | 402 | + | 0.527363 |
NA | ECP_3352 | ribosomal protein L11 methyltransferase | chromosome | CDS | 3518960 | 882 | + | 0.546485 |
NA | ECP_3469 | tryptophanyl-tRNA synthetase | chromosome | CDS | 3618956 | 1005 | - | 0.526368 |
NA | ECP_4416 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 4628869 | 951 | + | 0.532072 |
NA | ECP_1532 | spermidine N(1)-acetyltransferase | chromosome | CDS | 1581995 | 561 | + | 0.468806 |
NA | ECP_3386 | 30S ribosomal protein S13 | chromosome | CDS | 3551765 | 357 | - | 0.518207 |
NA | ECP_0941 | asparaginyl-tRNA synthetase | chromosome | CDS | 997973 | 1401 | - | 0.525339 |
NA | ECP_1431 | ribosomal-protein-serine acetyltransferase | chromosome | CDS | 1475022 | 540 | + | 0.435185 |
NA | ECP_4198 | 50S ribosomal protein L10 | chromosome | CDS | 4391833 | 498 | + | 0.522088 |
NA | ECP_4145 | 50S ribosomal protein L31 | chromosome | CDS | 4326417 | 213 | + | 0.492958 |
NA | ECP_1969 | probable amidase | chromosome | CDS | 2028136 | 1464 | - | 0.562842 |
NA | ECP_3707 | hypothetical tRNA/rRNA methyltransferase YibK | chromosome | CDS | 3888870 | 474 | + | 0.548523 |
NA | ECP_3266 | ribosomal RNA large subunit methyltransferase J | chromosome | CDS | 3437482 | 630 | - | 0.506349 |
NA | ECP_0265 | putative peptide chain release factor | chromosome | CDS | 285811 | 615 | + | 0.534959 |
NA | ECP_2152 | methionyl-tRNA synthetase | chromosome | CDS | 2234789 | 2043 | + | 0.522761 |
NA | ECP_1260 | protein methyltransferase HemK | chromosome | CDS | 1289132 | 834 | + | 0.555156 |
NA | ECP_3385 | 30S ribosomal protein S11 | chromosome | CDS | 3551359 | 390 | - | 0.515385 |
NA | ECP_2766 | 23S rRNA (uracil-5-)-methyltransferase RumA | chromosome | CDS | 2907108 | 1302 | - | 0.509217 |
NA | ECP_2561 | hypothetical protein YfhC | chromosome | CDS | 2702769 | 537 | - | 0.528864 |
NA | ECP_1666 | threonyl-tRNA synthetase | chromosome | CDS | 1715428 | 1929 | - | 0.494038 |
NA | ECP_0360 | 50S ribosomal protein L31 type B | chromosome | CDS | 379805 | 267 | - | 0.460674 |
NA | ECP_4240 | ribosomal large subunit pseudouridine synthase F | chromosome | CDS | 4445866 | 873 | + | 0.5063 |
NA | ECP_0204 | prolyl-tRNA synthetase | chromosome | CDS | 221218 | 1719 | - | 0.538685 |
NA | ECP_0022 | 30S ribosomal protein S20 | chromosome | CDS | 22358 | 264 | - | 0.462121 |
NA | ECP_3370 | Sua5/YciO/YrdC family protein | chromosome | CDS | 3540484 | 618 | - | 0.524272 |
NA | ECP_1661 | phenylalanyl-tRNA synthetase beta chain | chromosome | CDS | 1710343 | 2388 | - | 0.544389 |
NA | ECP_0684 | MiaB protein | chromosome | CDS | 720322 | 1425 | - | 0.54807 |
NA | ECP_4758 | peptide chain release factor 3 (RF-3) | chromosome | CDS | 4907555 | 1617 | + | 0.53927 |
NA | ECP_3267 | hypothetical RNA binding protein | chromosome | CDS | 3438237 | 294 | + | 0.486395 |
NA | ECP_3749 | tRNA (guanosine-2'-O-)-methyltransferase | chromosome | CDS | 3928988 | 690 | + | 0.549275 |
NA | ECP_3353 | tRNA-dihydrouridine synthase B | chromosome | CDS | 3520170 | 966 | + | 0.519669 |
NA | ECP_3661 | glycyl-tRNA synthetase beta chain | chromosome | CDS | 3835152 | 2070 | - | 0.550725 |
NA | ECP_2884 | peptide chain release factor 2 | chromosome | CDS | 3054067 | 882 | - | 0.530612 |
NA | ECP_2212 | putative elongation factor | chromosome | CDS | 2306296 | 573 | + | 0.495637 |
NA | ECP_1810 | aspartyl-tRNA synthetase | chromosome | CDS | 1860478 | 1773 | - | 0.539763 |
NA | ECP_3394 | 30S ribosomal protein S8 | chromosome | CDS | 3555803 | 393 | - | 0.501272 |
NA | ECP_3396 | 50S ribosomal protein L5 | chromosome | CDS | 3556549 | 540 | - | 0.498148 |
NA | ECP_4196 | 50S ribosomal protein L11 | chromosome | CDS | 4390405 | 429 | + | 0.517483 |
NA | ECP_3395 | 30S ribosomal protein S14 | chromosome | CDS | 3556229 | 306 | - | 0.526144 |
NA | ECP_0907 | seryl-tRNA synthetase | chromosome | CDS | 953210 | 1293 | + | 0.528229 |
NA | ECP_3393 | 50S ribosomal protein L6 | chromosome | CDS | 3555257 | 534 | - | 0.520599 |
NA | ECP_4667 | RNA 2'-phosphotransferase | chromosome | CDS | 4864164 | 555 | + | 0.506306 |
NA | ECP_4197 | 50S ribosomal protein L1 | chromosome | CDS | 4390837 | 705 | + | 0.514894 |
NA | ECP_1335 | protein YciH | chromosome | CDS | 1365750 | 327 | + | 0.507645 |
NA | ECP_4754 | ribosomal RNA small subunit methyltransferase C | chromosome | CDS | 4904837 | 1032 | - | 0.557171 |
NA | ECP_0672 | leucyl-tRNA synthetase | chromosome | CDS | 706062 | 2583 | - | 0.530778 |
NA | ECP_1951 | hypothetical protein | chromosome | CDS | 2004615 | 477 | + | 0.467505 |
NA | ECP_1316 | putative ribosomal large subunit pseudouridine synthase | chromosome | CDS | 1348433 | 876 | + | 0.534247 |
NA | ECP_3374 | peptide deformylase | chromosome | CDS | 3543331 | 510 | + | 0.466667 |
NA | ECP_0053 | dimethyladenosine transferase | chromosome | CDS | 53715 | 822 | - | 0.537713 |
NA | ECP_4193 | elongation factor Tu | chromosome | CDS | 4387902 | 1185 | + | 0.530802 |
NA | ECP_3273 | 50S ribosomal protein L21 | chromosome | CDS | 3443443 | 312 | - | 0.483974 |
NA | ECP_3741 | ribonuclease PH | chromosome | CDS | 3920304 | 717 | - | 0.560669 |
NA | ECP_0849 | hypothetical protein YliG | chromosome | CDS | 890861 | 1326 | - | 0.522624 |
NA | ECP_1259 | peptide chain release factor 1 | chromosome | CDS | 1288050 | 1083 | + | 0.527239 |
NA | ECP_0176 | methionine aminopeptidase | chromosome | CDS | 193185 | 795 | - | 0.508176 |
NA | ECP_0154 | glutamyl-tRNA synthetase | chromosome | CDS | 164635 | 927 | - | 0.535059 |
NA | ECP_2951 | L-asparaginase II precursor | chromosome | CDS | 3117400 | 1047 | - | 0.518625 |
NA | ECP_4199 | 50S ribosomal protein L7/L12 | chromosome | CDS | 4392397 | 366 | + | 0.461749 |
NA | ECP_2883 | lysyl-tRNA synthetase | chromosome | CDS | 3052540 | 1518 | - | 0.525692 |
NA | ECP_3734 | 50S ribosomal protein L33 | chromosome | CDS | 3915720 | 168 | - | 0.404762 |
NA | ECP_1662 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 1712745 | 984 | - | 0.546748 |
NA | ECP_0811 | putative ATP-dependent RNA helicase RhlE | chromosome | CDS | 846751 | 1362 | + | 0.561674 |
NA | ECP_4182 | tRNA (uracil-5-)-methyltransferase | chromosome | CDS | 4374284 | 1101 | - | 0.502271 |
NA | ECP_3376 | SUN protein | chromosome | CDS | 3544854 | 1290 | + | 0.502326 |
NA | ECP_0200 | peptidyl-tRNA hydrolase | chromosome | CDS | 219040 | 423 | + | 0.543735 |
NA | ECP_3432 | 30S ribosomal protein S12 | chromosome | CDS | 3585814 | 375 | - | 0.533333 |
NA | ECP_1128 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 1183563 | 1107 | - | 0.536585 |
NA | ECP_2610 | 30S ribosomal protein S16 | chromosome | CDS | 2753801 | 249 | - | 0.514056 |
NA | ECP_2609 | 16S rRNA processing protein RimM | chromosome | CDS | 2753234 | 549 | - | 0.48816 |
NA | ECP_2941 | glutathione synthetase | chromosome | CDS | 3109696 | 951 | + | 0.521556 |
NA | ECP_1076 | ribonuclease E | chromosome | CDS | 1132061 | 3186 | - | 0.555556 |
NA | ECP_0180 | ribosome recycling factor | chromosome | CDS | 197080 | 558 | + | 0.503584 |
NA | ECP_3405 | 50S ribosomal protein L2 | chromosome | CDS | 3560193 | 822 | - | 0.526764 |
NA | ECP_4265 | hypothetical protein YjbN (putative tRNA-dihydrouridine synthase) | chromosome | CDS | 4471986 | 996 | + | 0.533133 |
NA | ECP_3407 | 50S ribosomal protein L4 | chromosome | CDS | 3561331 | 606 | - | 0.531353 |
NA | ECP_1752 | hypothetical protein YoaB (putative translation initiation inhibitor) | chromosome | CDS | 1805214 | 348 | + | 0.522988 |
NA | ECP_4401 | putative lysyl-tRNA synthetase | chromosome | CDS | 4612816 | 978 | + | 0.52454 |
NA | ECP_3431 | 30S ribosomal protein S7 | chromosome | CDS | 3585247 | 471 | - | 0.496815 |
NA | ECP_3255 | ribosome-binding factor A | chromosome | CDS | 3423227 | 402 | - | 0.529851 |
NA | ECP_4096 | D-tyrosyl-tRNA(Tyr) deacylase | chromosome | CDS | 4279320 | 438 | + | 0.550228 |
NA | ECP_3402 | 30S ribosomal protein S3 | chromosome | CDS | 3558832 | 702 | - | 0.509971 |
NA | ECP_0177 | 30S ribosomal protein S2 | chromosome | CDS | 194347 | 726 | + | 0.513774 |
NA | ECP_1058 | ribosomal-protein-alanine acetyltransferase | chromosome | CDS | 1116445 | 585 | + | 0.494017 |
NA | ECP_3206 | TdcF protein | chromosome | CDS | 3375312 | 390 | - | 0.520513 |
NA | ECP_0153 | poly(A) polymerase | chromosome | CDS | 163178 | 1419 | - | 0.557435 |
NA | ECP_3409 | 30S ribosomal protein S10 | chromosome | CDS | 3562609 | 312 | - | 0.551282 |
NA | ECP_3429 | elongation factor Tu | chromosome | CDS | 3581781 | 1185 | - | 0.534177 |
NA | ECP_0587 | cysteinyl-tRNA synthetase | chromosome | CDS | 617573 | 1386 | + | 0.544012 |
NA | ECP_2597 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 2742896 | 981 | - | 0.529052 |
NA | ECP_0325 | lysyl-tRNA synthetase, heat inducible | chromosome | CDS | 343652 | 1497 | - | 0.370741 |
NA | ECP_0359 | putative 50S ribosomal protein L36 | chromosome | CDS | 379665 | 141 | - | 0.432624 |
NA | ECP_3330 | ribonuclease G | chromosome | CDS | 3497644 | 1470 | - | 0.521769 |
NA | ECP_3406 | 50S ribosomal protein L23 | chromosome | CDS | 3561032 | 303 | - | 0.481848 |
NA | ECP_1009 | hypothetical protein YcdK | chromosome | CDS | 1066187 | 387 | - | 0.547804 |
NA | ECP_2772 | hypothetical protein YqcB (putative RNA pseudouridylate synthase) | chromosome | CDS | 2916409 | 783 | - | 0.538953 |
NA | ECP_3253 | 30S ribosomal protein S15 | chromosome | CDS | 3421865 | 270 | - | 0.522222 |
NA | ECP_0922 | 30S ribosomal protein S1 | chromosome | CDS | 972555 | 1674 | + | 0.511947 |
NA | ECP_3256 | translation initiation factor IF-2 | chromosome | CDS | 3423792 | 2673 | - | 0.530864 |
NA | ECP_0873 | hypothetical RNA methyltransferase YbjF | chromosome | CDS | 912659 | 1128 | + | 0.539894 |
NA | ECP_0178 | elongation factor Ts | chromosome | CDS | 195207 | 852 | + | 0.496479 |
NA | ECP_3403 | 50S ribosomal protein L22 | chromosome | CDS | 3559551 | 333 | - | 0.498498 |
NA | ECP_3389 | 50S ribosomal subunit protein L15 | chromosome | CDS | 3553755 | 435 | - | 0.535632 |
NA | ECP_2224 | ribosomal small subunit pseudouridine synthase A | chromosome | CDS | 2320634 | 696 | - | 0.534483 |
NA | ECP_3430 | elongation factor G | chromosome | CDS | 3583036 | 2115 | - | 0.508747 |
NA | ECP_1121 | hypothetical protein | chromosome | CDS | 1176468 | 216 | - | 0.435185 |
NA | ECP_1664 | 50S ribosomal protein L35 | chromosome | CDS | 1714588 | 198 | - | 0.5 |
NA | ECP_2357 | tRNA pseudouridine synthase A | chromosome | CDS | 2466657 | 813 | - | 0.555966 |
NA | ECP_2226 | 50S ribosomal protein L25 | chromosome | CDS | 2323364 | 285 | + | 0.505263 |
NA | ECP_1251 | putative GTP-binding protein | chromosome | CDS | 1279759 | 1092 | - | 0.513736 |
NA | ECP_1665 | translation initiation factor IF-3 | chromosome | CDS | 1714882 | 435 | - | 0.478161 |
NA | ECP_4425 | hypothetical tRNA/rRNA methyltransferase YjfH | chromosome | CDS | 4638803 | 732 | + | 0.554645 |
NA | ECP_2519 | histidyl-tRNA synthetase | chromosome | CDS | 2649045 | 1275 | - | 0.545882 |
NA | ECP_0700 | glutaminyl-tRNA synthetase | chromosome | CDS | 741439 | 1665 | + | 0.52973 |
NA | ECP_2578 | ATP-dependent RNA helicase SrmB | chromosome | CDS | 2718306 | 1335 | + | 0.546067 |
NA | ECP_3175 | putative ribosomal RNA small subunit methyltransferase D | chromosome | CDS | 3345769 | 1137 | - | 0.5365 |
NA | ECP_4391 | elongation factor P | chromosome | CDS | 4605858 | 567 | + | 0.497355 |
NA | ECP_3313 | 30S ribosomal protein S9 | chromosome | CDS | 3479414 | 393 | - | 0.521628 |
NA | ECP_0898 | translation initiation factor IF-1 | chromosome | CDS | 940017 | 219 | - | 0.484018 |
NA | ECP_0465 | queuine tRNA-ribosyltransferase | chromosome | CDS | 493627 | 1128 | + | 0.512411 |
NA | ECP_0958 | ribosome modulation factor | chromosome | CDS | 1019089 | 168 | + | 0.541667 |
NA | ECP_3391 | 30S ribosomal protein S5 | chromosome | CDS | 3554376 | 504 | - | 0.498016 |
NA | ECP_3401 | 50S ribosomal protein L16 | chromosome | CDS | 3558409 | 411 | - | 0.515815 |
NA | ECP_3254 | tRNA pseudouridine synthase B | chromosome | CDS | 3422283 | 945 | - | 0.528042 |
NA | ECP_3314 | 50S ribosomal protein L13 | chromosome | CDS | 3479822 | 429 | - | 0.505827 |
NA | ECP_3397 | 50S ribosomal protein L24 | chromosome | CDS | 3557103 | 315 | - | 0.457143 |
NA | ECP_4448 | 50S ribosomal protein L9 | chromosome | CDS | 4655637 | 450 | + | 0.497778 |
NA | ECP_3390 | 50S ribosomal protein L30 | chromosome | CDS | 3554193 | 180 | - | 0.5 |
NA | ECP_3392 | 50S ribosomal protein L18 | chromosome | CDS | 3554894 | 354 | - | 0.536723 |
NA | ECP_2369 | hypothetical adenine-specific methylase YfcB | chromosome | CDS | 2479341 | 1266 | - | 0.522117 |
NA | ECP_1252 | peptidyl-tRNA hydrolase | chromosome | CDS | 1280967 | 585 | - | 0.500855 |
NA | ECP_1081 | 50S ribosomal protein L32 | chromosome | CDS | 1138246 | 174 | + | 0.54023 |
NA | ECP_1397 | ATP-independent RNA helicase DbpA | chromosome | CDS | 1428811 | 1374 | + | 0.515284 |
NA | ECP_4389 | hypothetical protein YjeJ | chromosome | CDS | 4603684 | 870 | - | 0.452874 |
NA | ECP_3382 | 50S ribosomal protein L17 | chromosome | CDS | 3549266 | 384 | - | 0.533854 |
NA | ECP_1715 | L-asparaginase I | chromosome | CDS | 1768268 | 1017 | + | 0.500492 |
NA | ECP_3735 | 50S ribosomal protein L28 | chromosome | CDS | 3915908 | 237 | - | 0.527426 |
NA | ECP_0866 | ribosomal protein S6 modification protein | chromosome | CDS | 906118 | 903 | + | 0.560354 |
NA | ECP_3400 | 50S ribosomal protein L29 | chromosome | CDS | 3558218 | 192 | - | 0.541667 |
NA | ECP_3408 | 50S ribosomal protein L3 | chromosome | CDS | 3561947 | 630 | - | 0.515873 |
NA | ECP_3384 | 30S ribosomal protein S4 | chromosome | CDS | 3550705 | 621 | - | 0.507246 |
NA | ECP_3155 | 30S ribosomal protein S21 | chromosome | CDS | 3322467 | 216 | + | 0.518519 |
NA | ECP_1078 | ribosomal large subunit pseudouridine synthase C | chromosome | CDS | 1135819 | 960 | + | 0.517708 |
NA | ECP_1314 | probable translation factor YciO | chromosome | CDS | 1345683 | 621 | + | 0.491143 |
NA | ECP_4445 | 30S ribosomal subunit protein S6 | chromosome | CDS | 4654737 | 306 | + | 0.53268 |
NA | ECP_1822 | arginyl-tRNA synthetase | chromosome | CDS | 1871790 | 1734 | + | 0.529988 |
NA | ECP_3662 | glycine tRNA synthetase, alpha subunit | chromosome | CDS | 3837231 | 912 | - | 0.560307 |
NA | ECP_0059 | ribosomal large subunit pseudouridine synthase A | chromosome | CDS | 60402 | 660 | - | 0.537879 |
NA | ECP_3291 | probable sigma(54) modulation protein | chromosome | CDS | 3456480 | 288 | + | 0.447917 |
NA | ECP_3692 | selenocysteine-specific elongation factor | chromosome | CDS | 3867550 | 1845 | - | 0.564228 |
NA | ECP_1130 | putative ribosomal large subunit pseudouridine synthase | chromosome | CDS | 1185194 | 654 | - | 0.51529 |
NA | ECP_3375 | methionyl-tRNA formyltransferase | chromosome | CDS | 3543855 | 948 | + | 0.515823 |
NA | ECP_2599 | putative sigma 54 modulation protein | chromosome | CDS | 2745018 | 342 | + | 0.461988 |
NA | ECP_3250 | probable ATP-dependent RNA helicase DeaD | chromosome | CDS | 3416421 | 1890 | - | 0.558201 |