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2024-06-16 16:23:20

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 185

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO1104 hypothetical proteinchromosome CDS1247504 351 - 0.45584
NA YPO0640 hypothetical proteinchromosome CDS697119 471 + 0.422505
NA YPO0245a hypothetical proteinchromosome CDS243738 573 + 0.467714
NA YPO1638 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1863725 1116 - 0.499104
NA YPO2018 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2290317 831 + 0.535499
NA YPO2010 hypothetical proteinchromosome CDS2282141 1092 - 0.495421
NA YPO0071 putative methyltransferasechromosome CDS80447 489 - 0.490798
NA YPO1669 YjgF-family lipoproteinchromosome CDS1900110 378 - 0.417989
NA YPO1595 50S ribosomal protein L32chromosome CDS1820059 168 + 0.553571
NA YPO2923 putative zinc-binding proteinchromosome CDS3269085 480 - 0.554167
NA YPO0466 hypothetical proteinchromosome CDS493618 2448 - 0.35335
NA YPO0884 hypothetical proteinchromosome CDS968972 261 - 0.394636
NA YPO1640 putative pseudouridine synthasechromosome CDS1865466 627 - 0.492823
NA YPO2228 hypothetical proteinchromosome CDS2504544 327 + 0.477064
NA YPO1997 hypothetical proteinchromosome CDS2269863 1074 - 0.485102
NA YPO3693 hypothetical proteinchromosome CDS4127240 639 + 0.41784
NA YPO0362 lysyl-tRNA synthetasechromosome CDS371392 978 + 0.492843
NA YPO1996 hypothetical proteinchromosome CDS2268167 906 - 0.40287
NA YPO1175 hypothetical proteinchromosome CDS1323368 945 + 0.486772
NA YPO0381 putative methylasechromosome CDS397600 741 + 0.538462
NA YPO3504 hypothetical proteinchromosome CDS3914946 294 + 0.438776
NA YPO3279 putative sigma 54 modulation proteinchromosome CDS3660327 363 + 0.446281
NA YPO3398 glutamyl-tRNA synthetasechromosome CDS3795916 966 + 0.505176
NA YPO1955 putative acetyltransferasechromosome CDS2220029 900 + 0.438889
NA YPO1284 elongation factor Pchromosome CDS1442544 573 - 0.460733
NA YPO3590 hypothetical proteinchromosome CDS3998123 387 + 0.483204
NA YPO1066 hypothetical proteinchromosome CDS1209358 417 + 0.494005
NA YPO3134 50S ribosomal protein L31chromosome CDS3495495 261 + 0.467433
NA YPO3674 putative insecticidal toxinchromosome CDS4101516 3036 - 0.481225
NA YPO1902 hypothetical proteinchromosome CDS2137945 582 - 0.489691
NA YPO0628 putative translational inhibitor proteinchromosome CDS688742 405 + 0.511111
NA YPO1591 ribosomal large subunit pseudouridine synthase Cchromosome CDS1816989 963 + 0.503634
NA YPO0240 hypothetical proteinchromosome CDS238588 1290 - 0.460465
NA YPO1336 23S rRNA (uracil-5-)-methyltransferasechromosome CDS1501209 1131 + 0.521662
NA YPO0400 hypothetical proteinchromosome CDS417807 537 + 0.409683
NA YPO0316 hypothetical proteinchromosome CDS323066 1038 + 0.519268
NA YPO2750 hypothetical proteinchromosome CDS3082727 933 + 0.488746
NA YPO2898 putative SpoU-family rRNA methylasechromosome CDS3240880 774 - 0.502584
NA YPO1038 hypothetical proteinchromosome CDS1178545 774 + 0.48708
NA YPO2213 putative RNA pseudouridylate synthase-family proteinchromosome CDS2486570 957 + 0.513062
NA YPO0588 putative methyltransferasechromosome CDS636017 1188 + 0.495791
NA YPO3135 50S ribosomal protein L36chromosome CDS3495771 144 + 0.479167
NA YPO0290 hypothetical proteinchromosome CDS291275 1080 - 0.525
NA YPO2420 hypothetical proteinchromosome CDS2719869 2004 - 0.457585
NA YPO0029 D-tyrosyl-tRNA deacylasechromosome CDS38825 438 + 0.488584
NA YPO2212 hypothetical proteinchromosome CDS2485525 621 + 0.460548
NA YPO2070 hypothetical proteinchromosome CDS2349958 345 - 0.486957
NA YPO3655 hypothetical proteinchromosome CDS4073470 966 - 0.518634
NA YPO0627 putative translational inhibitor proteinchromosome CDS688077 381 + 0.354331
NA YPO0293 hypothetical proteinchromosome CDS294300 1062 - 0.490584
NA YPO3261 amidasechromosome CDS3632668 1398 + 0.550072
alaS YPO3305 alanyl-tRNA synthetasechromosome CDS3683714 2628 - 0.5
alcB YPO1531 putative siderophore biosynthetic enzymechromosome CDS1742180 582 + 0.484536
ampM YPO1043 methionine aminopeptidasechromosome CDS1184138 792 - 0.488636
ansA YPO2161 cytoplasmic asparaginase Ichromosome CDS2430044 1017 - 0.476893
ansB YPO1386 putative L-asparaginase II precursorchromosome CDS1563862 1038 + 0.467245
argS YPO2046 arginyl-tRNA synthetasechromosome CDS2323093 1731 - 0.499133
asnS YPO1412 asparaginyl-tRNA synthetasechromosome CDS1600525 1401 - 0.498929
aspS YPO2053 aspartyl-tRNA synthetasechromosome CDS2331620 1797 + 0.510295
cafA YPO3669 ribonuclease Gchromosome CDS4090621 1470 + 0.476871
cca YPO0650 tRNA nucleotidyltransferasechromosome CDS707417 1239 - 0.533495
cysS YPO3073 cysteinyl-tRNA synthetasechromosome CDS3428619 1386 - 0.497835
dbpA YPO1776 ATP-dependent RNA helicasechromosome CDS2022577 1383 + 0.501085
ddhA YPO3115 glucose-1-phosphate cytidylyltransferasechromosome CDS3471573 786 - 0.437659
deaD YPO3488 cold-shock dead-box protein Achromosome CDS3895290 1995 - 0.535338
def YPO0242 peptide deformylasechromosome CDS240943 513 - 0.452242
efp YPO0354 elongation factor Pchromosome CDS365600 567 + 0.485009
fmt YPO0241 methionyl-tRNA formyltransferasechromosome CDS239971 948 - 0.470464
frr YPO1047 ribosome releasing factorchromosome CDS1188144 558 + 0.47491
ftsJ YPO3503 ribosomal RNA large subunit methyltransferase Jchromosome CDS3914170 630 - 0.455556
fusA YPO0202 elongation factor Gchromosome CDS216281 2109 + 0.480797
glnS YPO2630 glutaminyl-tRNA synthetasechromosome CDS2956358 1668 + 0.495803
gltX YPO2984 glutamyl-tRNA synthetasechromosome CDS3333476 1416 + 0.492232
glyQ YPO4072 glycyl-tRNA synthetase alpha subunitchromosome CDS4593300 915 - 0.527869
glyS YPO4071 glycyl-tRNA synthetase beta subunitchromosome CDS4591221 2070 - 0.523188
gshB YPO0935 glutathione synthetasechromosome CDS1027196 960 + 0.491667
hisS YPO2878 histidyl-tRNA synthetasechromosome CDS3213416 1275 - 0.507451
holE YPO1782 DNA polymerase III, theta subunitchromosome CDS2029331 231 - 0.441558
hslR YPO0140 heat shock protein 15chromosome CDS153758 408 - 0.522059
ileS YPO0475 isoleucyl-tRNA synthetasechromosome CDS504735 2817 + 0.500887
infA YPO1370 translation initiation factor IF-1chromosome CDS1538760 219 - 0.497717
infB YPO3496 translation initiation factor IF-2chromosome CDS3904146 2655 - 0.496045
infC YPO2432 translation initiation factor IF-3chromosome CDS2732648 552 - 0.474638
iucB YPO0991 putative siderophore biosynthesis protein IucBchromosome CDS1099293 951 + 0.554154
ksgA YPO0492 dimethyladenosine transferasechromosome CDS522965 819 - 0.47619
leuS YPO2610 leucyl-tRNA synthetasechromosome CDS2930913 2583 - 0.510647
ligT YPO3395 putative 2'-5' RNA ligasechromosome CDS3793586 576 + 0.565972
lysS YPO0888 lysyl-tRNA synthetasechromosome CDS971744 1518 - 0.479578
map YPO3337 methionine aminopeptidasechromosome CDS3723448 786 + 0.510178
miaA YPO0372 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS386887 942 + 0.511677
miaB YPO2620 putative tRNA-thiotransferasechromosome CDS2942788 1425 - 0.482105
pcnB YPO3399 poly(A) polymerasechromosome CDS3797123 1323 + 0.517007
pelY YPO3994 periplasmic pectate lyase precursorchromosome CDS4500698 1719 - 0.4968
pheS YPO2429 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2730478 984 - 0.47561
pnp YPO3490 polyribonucleotide nucleotidyltransferasechromosome CDS3898480 2118 - 0.500944
prfA YPO2017 peptide chain release factor 1chromosome CDS2289235 1083 + 0.514312
prfB YPO0889 peptide chain release factor 2chromosome CDS973271 1101 - 0.473206
prfC YPO0430 peptide chain release factor 3chromosome CDS449865 1590 + 0.497484
prmA YPO3656 ribosomal protein L11 methyltransferasechromosome CDS4075024 882 - 0.530612
proS YPO1068 prolyl-tRNA synthetasechromosome CDS1210676 1719 - 0.499127
pth YPO2011 peptidyl-tRNA hydrolasechromosome CDS2283396 591 - 0.477157
queA YPO3192 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS3553831 1071 - 0.513539
rbfA YPO3495 ribosome-binding factor Achromosome CDS3903670 411 - 0.445255
rhlB YPO3869 ATP-dependent RNA helicasechromosome CDS4343947 1287 + 0.486402
rimJ YPO2041 ribosomal-protein-alanine acetyltransferasechromosome CDS2311957 585 + 0.483761
rimM YPO3294 16S rRNA-processing proteinchromosome CDS3673178 549 - 0.468124
rluA YPO0497 ribosomal large subunit pseudouridine synthase Achromosome CDS529785 621 - 0.489533
rluD YPO3277 ribosomal large subunit pseudouridine synthase Dchromosome CDS3658128 978 - 0.482618
rmf YPO1423a putative ribosome modulation factorchromosome CDS1618498 168 + 0.511905
rnd YPO2075 ribonuclease Dchromosome CDS2356340 1122 + 0.481283
rne YPO1590 ribonuclease Echromosome CDS1812749 3666 - 0.510638
rnpA YPO4101 ribonuclease Pchromosome CDS4620598 360 + 0.508333
rph YPO0044 ribonuclease PHchromosome CDS57519 717 + 0.51325
rplA YPO3750 50S ribosomal protein L1chromosome CDS4207281 705 - 0.47234
rplB YPO0213 50S ribosomal protein L2chromosome CDS223566 825 + 0.515152
rplC YPO0210 50S ribosomal protein L3chromosome CDS221999 630 + 0.488889
rplD YPO0211 50S ribosomal protein L4chromosome CDS222645 606 + 0.50165
rplE YPO0222 50S ribosomal protein L5chromosome CDS227506 540 + 0.488889
rplF YPO0224 50S ribosomal protein L6chromosome CDS228805 534 + 0.513109
rplI YPO3536 50S ribosomal protein L9chromosome CDS3947900 453 - 0.494481
rplJ YPO3749 50S ribosomal protein L10chromosome CDS4206419 498 - 0.493976
rplK YPO3751 50S ribosomal protein L11chromosome CDS4207989 429 - 0.487179
rplL YPO3748 50S ribosomal protein L7/L12chromosome CDS4205984 369 - 0.468835
rplM YPO3563 50S ribosomal protein L13chromosome CDS3976050 429 - 0.496504
rplN YPO0220 50S ribosomal protein L14chromosome CDS226795 372 + 0.502688
rplO YPO0228 50S ribosomal protein L15chromosome CDS230405 435 + 0.510345
rplP YPO0217 50S ribosomal protein L16chromosome CDS225759 411 + 0.508516
rplQ YPO0235 50S ribosomal protein L17chromosome CDS234945 390 + 0.54359
rplR YPO0225 50S ribosomal protein L18chromosome CDS229348 354 + 0.516949
rplS YPO3292 50S ribosomal protein L19chromosome CDS3671971 348 - 0.477012
rplT YPO2430 50S ribosomal protein L20chromosome CDS2731960 357 - 0.498599
rplU YPO3512 50S ribosomal protein L21chromosome CDS3921900 312 - 0.455128
rplV YPO0215 50S ribosomal protein L22chromosome CDS224698 333 + 0.501502
rplW YPO0212 50S ribosomal protein L23chromosome CDS223247 303 + 0.485149
rplX YPO0221 50S ribosomal protein L24chromosome CDS227177 315 + 0.460317
rplY YPO1264 50S ribosomal protein L25chromosome CDS1420786 285 - 0.463158
rpmA YPO3511 50S ribosomal protein L27chromosome CDS3921623 258 - 0.488372
rpmB YPO0050 50S ribosomal protein L28chromosome CDS62680 237 + 0.506329
rpmC YPO0218 50S ribosomal protein L29chromosome CDS226169 192 + 0.5
rpmD YPO0227 50S ribosomal protein L30chromosome CDS230222 180 + 0.433333
rpmE YPO0111 50S ribosomal protein L31chromosome CDS119972 216 + 0.490741
rpmG YPO0051 50S ribosomal protein L33chromosome CDS62928 168 + 0.392857
rpmH YPO4100 50S ribosomal protein L34chromosome CDS4620439 141 + 0.510638
rpmI YPO2431 50S ribosomal protein L35chromosome CDS2732354 198 - 0.459596
rpmJ YPO0230 50S ribosomal protein L36chromosome CDS232212 117 + 0.444444
rpsA YPO1392 30S ribosomal protein S1chromosome CDS1572210 1674 + 0.479092
rpsB YPO1044 30S ribosomal protein S2chromosome CDS1185364 726 + 0.477961
rpsC YPO0216 30S ribosomal protein S3chromosome CDS225048 699 + 0.493562
rpsD YPO0233 30S ribosomal protein S4chromosome CDS233269 621 + 0.478261
rpsE YPO0226 30S ribosomal protein S5chromosome CDS229716 504 + 0.484127
rpsF YPO3539 30S ribosomal protein S6chromosome CDS3948950 393 - 0.508906
rpsG YPO0201 30S ribosomal protein S7chromosome CDS215717 471 + 0.47983
rpsH YPO0223 30S ribosomal protein S8chromosome CDS228398 393 + 0.475827
rpsI YPO3562 30S ribosomal protein S9chromosome CDS3975643 393 - 0.493639
rpsJ YPO0209 30S ribosomal protein S10chromosome CDS221655 312 + 0.525641
rpsK YPO0232 30S ribosomal protein S11chromosome CDS232849 390 + 0.502564
rpsM YPO0231 30S ribosomal protein S13chromosome CDS232476 357 + 0.504202
rpsN YPO0222a 30S ribosomal protein S14chromosome CDS228059 306 + 0.513072
rpsO YPO3493 30S ribosomal protein S15chromosome CDS3902305 270 - 0.485185
rpsP YPO3295 30S ribosomal protein S16chromosome CDS3673748 249 - 0.502008
rpsQ YPO0219 30S ribosomal protein S17chromosome CDS226360 255 + 0.466667
rpsR YPO3537 30S ribosomal protein S18chromosome CDS3948392 228 - 0.473684
rpsS YPO0214 30S ribosomal protein S19chromosome CDS224405 279 + 0.505376
rpsT YPO0472 30S ribosomal protein S20chromosome CDS503087 264 - 0.465909
rpsU YPO0645 30S ribosomal protein S21chromosome CDS703092 216 - 0.462963
rpsl YPO0200 30S ribosomal protein S12chromosome CDS215246 375 + 0.506667
rsmC YPO0427 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS447705 1044 - 0.521073
rsuA YPO1266 ribosomal small subunit pseudouridine synthase Achromosome CDS1423503 708 + 0.519774
serS YPO1379 seryl-tRNA synthetasechromosome CDS1552685 1293 + 0.491106
speG YPO2830 spermidine acetyltransferasechromosome CDS3156889 546 + 0.39011
srmB YPO2708 ATP-dependent RNA helicasechromosome CDS3034941 1326 - 0.505279
tgt YPO3191 queuine tRNA-ribosyltransferasechromosome CDS3552614 1125 - 0.490667
thrS YPO2433 threonyl-tRNA synthetasechromosome CDS2733203 1929 - 0.473302
trmA YPO3911 tRNA (uracil-5-)-methyltransferasechromosome CDS4393381 1104 + 0.477355
trmD YPO3293 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS3672399 741 - 0.523617
trmH YPO0037 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS49607 693 - 0.496392
trpS YPO0157 tryptophanyl-tRNA synthetasechromosome CDS170958 1041 + 0.48415
truA YPO2766 tRNA pseudouridine synthase Achromosome CDS3100249 795 + 0.515723
truB YPO3494 tRNA pseudouridine synthase Bchromosome CDS3902696 975 - 0.494359
tsf YPO1045 elongation factor Tschromosome CDS1186217 858 + 0.480186
tuf YPO3754 elongation factor Tuchromosome CDS4209789 1185 - 0.479325
tuf YPO0203 elongation factor Tuchromosome CDS218462 1185 + 0.481857
tyrS YPO2369 tyrosyl-tRNA synthetasechromosome CDS2661823 1275 - 0.488627
valS YPO3443 valyl-tRNA synthetasechromosome CDS3848237 2898 + 0.519669
yfiF YPO3269 putative tRNA/rRNA methyltransferasechromosome CDS3641196 1167 - 0.533847