Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 190
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli O157:H7 str. Sakai, Sakai | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECs5230 | hypothetical protein | chromosome | CDS | 5330975 | 1773 | + | 0.315849 |
NA | ECs5235 | valyl-tRNA synthetase | chromosome | CDS | 5336379 | 2856 | - | 0.551471 |
NA | ECs5220 | hypothetical protein | chromosome | CDS | 5326065 | 426 | - | 0.511737 |
NA | ECs5289 | hypothetical protein | chromosome | CDS | 5415707 | 390 | + | 0.484615 |
NA | ECs2290 | spermidine N1-acetyltransferase | chromosome | CDS | 2255987 | 561 | + | 0.467023 |
NA | ECs3147 | polymyxin resistance protein B | chromosome | CDS | 3103785 | 297 | - | 0.447811 |
NA | ECs3479 | small membrane protein A | chromosome | CDS | 3473803 | 153 | + | 0.464052 |
NA | ECs1013 | asparaginyl-tRNA synthetase | chromosome | CDS | 1117056 | 1401 | - | 0.526767 |
NA | ECs3447 | hypothetical protein | chromosome | CDS | 3437689 | 1038 | - | 0.56262 |
NA | ECs4082 | putative sigma-54 modulation protein | chromosome | CDS | 4088526 | 288 | + | 0.447917 |
NA | ECs0456 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | chromosome | CDS | 488641 | 1071 | + | 0.54155 |
NA | ECs4909 | 50S ribosomal protein L7/L12 | chromosome | CDS | 4989456 | 366 | + | 0.461749 |
NA | ECs4863 | 50S ribosomal subunit protein L31 | chromosome | CDS | 4928505 | 213 | + | 0.492958 |
NA | ECs0994 | 30S ribosomal protein S1 | chromosome | CDS | 1091638 | 1674 | + | 0.511947 |
NA | ECs3215 | putative adenine-specific methylase | chromosome | CDS | 3173871 | 933 | - | 0.529475 |
NA | ECs2624 | hypothetical protein | chromosome | CDS | 2596467 | 279 | + | 0.426523 |
NA | ECs4185 | 50S ribosomal protein L3 | chromosome | CDS | 4187309 | 630 | - | 0.512698 |
NA | ECs0171 | 30S ribosomal protein S2 | chromosome | CDS | 193360 | 726 | + | 0.513774 |
NA | ECs3077 | 50S ribosomal protein L25 | chromosome | CDS | 3017447 | 285 | + | 0.498246 |
NA | ECs4810 | D-tyrosyl-tRNA deacylase | chromosome | CDS | 4873586 | 438 | + | 0.547945 |
NA | ECs2513 | RNase D | chromosome | CDS | 2488693 | 1128 | - | 0.541667 |
NA | ECs5179 | 50S ribosomal protein L9 | chromosome | CDS | 5279834 | 450 | + | 0.495556 |
NA | ECs0148 | glutamyl-tRNA synthetase | chromosome | CDS | 163508 | 927 | - | 0.538296 |
NA | ECs0699 | hypothetical protein | chromosome | CDS | 773692 | 1425 | - | 0.540351 |
NA | ECs5136 | lysyl-tRNA synthetase | chromosome | CDS | 5236923 | 978 | + | 0.521472 |
NA | ECs4638 | 50S ribosomal protein L34 | chromosome | CDS | 4670569 | 141 | + | 0.51773 |
NA | ECs0193 | hypothetical protein | chromosome | CDS | 218177 | 411 | + | 0.545012 |
NA | ECs2426 | threonyl-tRNA synthetase | chromosome | CDS | 2400355 | 1929 | - | 0.499741 |
NA | ECs5147 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 5252977 | 951 | + | 0.534175 |
NA | ECs3966 | hypothetical protein | chromosome | CDS | 3974370 | 1137 | - | 0.542656 |
NA | ECs4045 | polynucleotide phosphorylase | chromosome | CDS | 4051530 | 2205 | - | 0.535147 |
NA | ECs1708 | putative GTP-binding protein | chromosome | CDS | 1702603 | 1092 | - | 0.510989 |
NA | ECs4161 | 30S ribosomal protein S4 | chromosome | CDS | 4176067 | 621 | - | 0.507246 |
NA | ECs0196 | prolyl-tRNA synthetase | chromosome | CDS | 220388 | 1719 | - | 0.545084 |
NA | ECs5225 | hypothetical protein | chromosome | CDS | 5328352 | 396 | - | 0.472222 |
NA | ECs4193 | 30S ribosomal protein S12 | chromosome | CDS | 4194084 | 375 | - | 0.533333 |
NA | ECs0978 | seryl-tRNA synthetase | chromosome | CDS | 1070540 | 1293 | + | 0.526682 |
NA | ECs4169 | 50S ribosomal protein L18 | chromosome | CDS | 4180256 | 354 | - | 0.536723 |
NA | ECs0875 | putative ATP-dependent RNA helicase | chromosome | CDS | 953239 | 1368 | + | 0.562865 |
NA | ECs1037 | ribosome modulation factor | chromosome | CDS | 1145186 | 168 | + | 0.541667 |
NA | ECs2576 | aspartyl-tRNA synthetase | chromosome | CDS | 2550680 | 1773 | - | 0.540891 |
NA | ECs4178 | 50S ribosomal protein L16 | chromosome | CDS | 4183771 | 411 | - | 0.515815 |
NA | ECs0650 | RNase I | chromosome | CDS | 725551 | 807 | - | 0.516729 |
NA | ECs4191 | elongation factor EF-2 | chromosome | CDS | 4191306 | 2115 | - | 0.507329 |
NA | ECs5005 | hypothetical protein | chromosome | CDS | 5083746 | 873 | + | 0.521191 |
NA | ECs0932 | ribosomal protein S6 modification protein | chromosome | CDS | 1017254 | 903 | + | 0.561462 |
NA | ECs3993 | hypothetical protein | chromosome | CDS | 3999350 | 390 | - | 0.517949 |
NA | ECs1462 | RNase E | chromosome | CDS | 1500288 | 3186 | - | 0.558067 |
NA | ECs4132 | putative dehydrogenase | chromosome | CDS | 4145240 | 966 | + | 0.522774 |
NA | ECs2518 | hypothetical protein | chromosome | CDS | 2495148 | 393 | + | 0.508906 |
NA | ECs0151 | hypothetical protein | chromosome | CDS | 165823 | 531 | - | 0.557439 |
NA | ECs1716 | peptide chain release factor 1 | chromosome | CDS | 1710894 | 1083 | + | 0.529086 |
NA | ECs3457 | suppressor of ftsH mutation | chromosome | CDS | 3455150 | 981 | - | 0.523955 |
NA | ECs0062 | hypothetical protein | chromosome | CDS | 64619 | 660 | - | 0.540909 |
NA | ECs3651 | hypothetical protein | chromosome | CDS | 3645402 | 783 | - | 0.537676 |
NA | ECs4526 | putative RNA methylase | chromosome | CDS | 4568377 | 690 | + | 0.553623 |
NA | ECs2423 | 50S ribosomal protein L20 | chromosome | CDS | 2399106 | 357 | - | 0.484594 |
NA | ECs2346 | tyrosyl-tRNA synthetase | chromosome | CDS | 2315675 | 1275 | - | 0.518431 |
NA | ECs0457 | queuine tRNA-ribosyltransferase | chromosome | CDS | 489766 | 1128 | + | 0.514184 |
NA | ECs3554 | alanyl-tRNA synthetase | chromosome | CDS | 3543309 | 2631 | - | 0.535918 |
NA | ECs4046 | 30S ribosomal protein S15 | chromosome | CDS | 4053912 | 270 | - | 0.522222 |
NA | ECs0029 | isoleucyl-tRNA synthetase | chromosome | CDS | 26802 | 2817 | + | 0.55733 |
NA | ECs3063 | elongation factor P | chromosome | CDS | 3000379 | 573 | + | 0.500873 |
NA | ECs3469 | 50S ribosomal protein L19 | chromosome | CDS | 3464303 | 348 | - | 0.482759 |
NA | ECs4159 | 50S ribosomal protein L17 | chromosome | CDS | 4174628 | 384 | - | 0.536458 |
NA | ECs4153 | methionyl-tRNA formyltransferase | chromosome | CDS | 4169226 | 948 | + | 0.525316 |
NA | ECs4186 | 30S ribosomal protein S10 | chromosome | CDS | 4187971 | 312 | - | 0.554487 |
NA | ECs4170 | 50S ribosomal protein L6 | chromosome | CDS | 4180619 | 534 | - | 0.520599 |
NA | ECs0969 | translation initiation factor IF-1 | chromosome | CDS | 1057302 | 219 | - | 0.484018 |
NA | ECs3460 | putative yhbH sigma 54 modulator | chromosome | CDS | 3457273 | 342 | + | 0.461988 |
NA | ECs2032 | ribosomal-protein-serine N-acetyltransferase | chromosome | CDS | 2016447 | 297 | + | 0.40404 |
NA | ECs4511 | 50S ribosomal protein L33 | chromosome | CDS | 4555109 | 168 | - | 0.404762 |
NA | ECs4550 | EspF | chromosome | CDS | 4589257 | 747 | - | 0.543507 |
NA | ECs5375 | 50S ribosomal protein L36 | chromosome | CDS | 344782 | 141 | - | 0.432624 |
NA | ECs3948 | 30S ribosomal protein S21 | chromosome | CDS | 3950312 | 216 | + | 0.518519 |
NA | ECs4599 | hypothetical protein | chromosome | CDS | 4629083 | 480 | - | 0.51875 |
NA | ECs1194 | hypothetical protein | chromosome | CDS | 1261810 | 237 | + | 0.50211 |
NA | ECs3143 | hypothetical protein | chromosome | CDS | 3098552 | 1983 | + | 0.515381 |
NA | ECs5031 | hypothetical protein | chromosome | CDS | 5114823 | 1038 | + | 0.533719 |
NA | ECs0147 | poly(A) polymerase I | chromosome | CDS | 162051 | 1365 | - | 0.561172 |
NA | ECs0327 | 50S ribosomal protein L31 | chromosome | CDS | 344922 | 264 | - | 0.462121 |
NA | ECs4104 | 50S ribosomal protein L13 | chromosome | CDS | 4113459 | 429 | - | 0.505827 |
NA | ECs4154 | RNA methyltransferase | chromosome | CDS | 4170219 | 1290 | + | 0.49845 |
NA | ECs1717 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1711976 | 834 | + | 0.557554 |
NA | ECs4103 | 30S ribosomal protein S9 | chromosome | CDS | 4113051 | 393 | - | 0.519084 |
NA | ECs1464 | hypothetical protein | chromosome | CDS | 1504046 | 960 | + | 0.51875 |
NA | ECs4567 | hypothetical protein | chromosome | CDS | 4605314 | 378 | - | 0.354497 |
NA | ECs4167 | 50S ribosomal protein L30 | chromosome | CDS | 4179555 | 180 | - | 0.5 |
NA | ECs4242 | Hsp15 | chromosome | CDS | 4241542 | 402 | + | 0.532338 |
NA | ECs0263 | peptide chain release factor 2 | chromosome | CDS | 291589 | 501 | + | 0.552894 |
NA | ECs4184 | 50S ribosomal protein L4 | chromosome | CDS | 4186693 | 606 | - | 0.529703 |
NA | ECs4512 | 50S ribosomal protein L28 | chromosome | CDS | 4555297 | 237 | - | 0.531646 |
NA | ECs1605 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 1614392 | 1107 | - | 0.533875 |
NA | ECs4896 | tRNA (uracil-5-)-methyltransferase | chromosome | CDS | 4971435 | 1101 | - | 0.511353 |
NA | ECs4174 | 50S ribosomal protein L24 | chromosome | CDS | 4182465 | 315 | - | 0.463492 |
NA | ECs4065 | 50S ribosomal protein L21 | chromosome | CDS | 4075492 | 312 | - | 0.483974 |
NA | ECs4176 | 30S ribosomal protein S17 | chromosome | CDS | 4183326 | 255 | - | 0.47451 |
NA | ECs1241 | hypothetical protein | chromosome | CDS | 1294546 | 1266 | + | 0.49684 |
NA | ECs4183 | 50S ribosomal protein L23 | chromosome | CDS | 4186394 | 303 | - | 0.481848 |
NA | ECs4058 | FtsJ | chromosome | CDS | 4069533 | 630 | - | 0.504762 |
NA | ECs1841 | hypothetical protein | chromosome | CDS | 1827562 | 873 | + | 0.54181 |
NA | ECs4175 | 50S ribosomal protein L14 | chromosome | CDS | 4182790 | 372 | - | 0.510753 |
NA | ECs4171 | 30S ribosomal protein S8 | chromosome | CDS | 4181165 | 393 | - | 0.501272 |
NA | ECs4467 | selenocysteinyl-tRNA-specific translation factor | chromosome | CDS | 4500717 | 1845 | - | 0.56206 |
NA | ECs4059 | hypothetical protein | chromosome | CDS | 4070288 | 294 | + | 0.486395 |
NA | ECs3026 | putative regulator protein | chromosome | CDS | 2958367 | 951 | - | 0.539432 |
NA | ECs3398 | putative ATP synthase beta subunit | chromosome | CDS | 3383087 | 738 | - | 0.548781 |
NA | ECs1256 | hypothetical protein | chromosome | CDS | 1312593 | 387 | - | 0.537468 |
NA | ECs3833 | periplasmic L-asparaginase II | chromosome | CDS | 3841276 | 1047 | - | 0.528176 |
NA | ECs4173 | 50S ribosomal protein L5 | chromosome | CDS | 4181911 | 540 | - | 0.498148 |
NA | ECs1199 | putative antirepressor protein | chromosome | CDS | 1263427 | 735 | + | 0.465306 |
NA | ECs1444 | RimJ | chromosome | CDS | 1484706 | 585 | + | 0.497436 |
NA | ECs4484 | hypothetical protein | chromosome | CDS | 4528047 | 474 | + | 0.546413 |
NA | ECs5361 | hypothetical protein | chromosome | CDS | 5497740 | 687 | + | 0.497817 |
NA | ECs2425 | translation initiation factor IF-3 | chromosome | CDS | 2399809 | 543 | - | 0.486188 |
NA | ECs5156 | hypothetical protein | chromosome | CDS | 5263002 | 732 | + | 0.561475 |
NA | ECs3763 | peptide chain release factor 2 | chromosome | CDS | 3773333 | 1098 | - | 0.535519 |
NA | ECs1709 | peptidyl-tRNA hydrolase | chromosome | CDS | 1703811 | 585 | - | 0.502564 |
NA | ECs1607 | hypothetical protein | chromosome | CDS | 1616023 | 654 | - | 0.510703 |
NA | ECs4163 | 30S ribosomal protein S13 | chromosome | CDS | 4177127 | 357 | - | 0.518207 |
NA | ECs5126 | hypothetical protein | chromosome | CDS | 5227806 | 870 | - | 0.450575 |
NA | ECs4182 | 50S ribosomal protein L2 | chromosome | CDS | 4185555 | 822 | - | 0.53163 |
NA | ECs3075 | 16S pseudouridylate 516 synthase | chromosome | CDS | 3014718 | 696 | - | 0.530172 |
NA | ECs3823 | glutathione synthetase | chromosome | CDS | 3833377 | 948 | + | 0.531646 |
NA | ECs4172 | 30S ribosomal protein S14 | chromosome | CDS | 4181591 | 306 | - | 0.526144 |
NA | ECs4119 | ribonuclease G | chromosome | CDS | 4131286 | 1470 | - | 0.523129 |
NA | ECs3471 | 16S rRNA-processing protein | chromosome | CDS | 3465490 | 552 | - | 0.48913 |
NA | ECs3939 | tRNA nucleotidyl transferase | chromosome | CDS | 3941419 | 1239 | + | 0.563358 |
NA | ECs4162 | 30S ribosomal protein S11 | chromosome | CDS | 4176721 | 390 | - | 0.517949 |
NA | ECs4713 | ATP-dependent RNA helicase | chromosome | CDS | 4757771 | 1266 | - | 0.525276 |
NA | ECs4226 | tryptophanyl-tRNA synthetase | chromosome | CDS | 4224830 | 1005 | - | 0.526368 |
NA | ECs2586 | arginyl-tRNA synthetase | chromosome | CDS | 2561992 | 1734 | + | 0.530565 |
NA | ECs4064 | 50S ribosomal protein L27 | chromosome | CDS | 4075214 | 258 | - | 0.5 |
NA | ECs4907 | 50S ribosomal protein L1 | chromosome | CDS | 4987896 | 705 | + | 0.51773 |
NA | ECs3472 | 30S ribosomal protein S16 | chromosome | CDS | 3466057 | 249 | - | 0.514056 |
NA | ECs4166 | 50S ribosomal protein L15 | chromosome | CDS | 4179117 | 435 | - | 0.537931 |
NA | ECs4164 | 50S ribosomal protein L36 | chromosome | CDS | 4177630 | 117 | - | 0.478632 |
NA | ECs3425 | putative deaminase | chromosome | CDS | 3417737 | 537 | - | 0.528864 |
NA | ECs1855 | hypothetical protein | chromosome | CDS | 1843361 | 330 | + | 0.487879 |
NA | ECs0915 | hypothetical protein | chromosome | CDS | 1001998 | 1326 | - | 0.526395 |
NA | ECs1839 | hypothetical protein | chromosome | CDS | 1825118 | 621 | + | 0.491143 |
NA | ECs1467 | 50S ribosomal protein L32 | chromosome | CDS | 1506462 | 174 | + | 0.54023 |
NA | ECs4131 | ribosomal protein L11 methyltransferase | chromosome | CDS | 4144030 | 882 | + | 0.546485 |
NA | ECs4148 | hypothetical protein | chromosome | CDS | 4165855 | 573 | - | 0.52356 |
NA | ECs4048 | ribosome-binding factor A | chromosome | CDS | 4055274 | 402 | - | 0.524876 |
NA | ECs4043 | inducible ATP-independent RNA helicase | chromosome | CDS | 4048468 | 1890 | - | 0.551852 |
NA | ECs3442 | ATP-dependent RNA helicase | chromosome | CDS | 3433269 | 1335 | + | 0.547566 |
NA | ECs5128 | elongation factor P | chromosome | CDS | 5229980 | 567 | + | 0.500882 |
NA | ECs5333 | peptide chain release factor 3 | chromosome | CDS | 5467460 | 1590 | + | 0.539623 |
NA | ECs1927 | ATP-dependent RNA helicase | chromosome | CDS | 1918983 | 1374 | + | 0.517467 |
NA | ECs1330 | 50S ribosomal protein L31 | chromosome | CDS | 1396594 | 264 | + | 0.42803 |
NA | ECs4192 | 30S ribosomal protein S7 | chromosome | CDS | 4193517 | 471 | - | 0.496815 |
NA | ECs0939 | 23S rRNA (uracil-5-)-methyltransferase | chromosome | CDS | 1023805 | 1128 | + | 0.548759 |
NA | ECs0710 | glutaminyl-tRNA synthetase | chromosome | CDS | 786116 | 1665 | + | 0.524324 |
NA | ECs0170 | methionine aminopeptidase | chromosome | CDS | 192198 | 795 | - | 0.498113 |
ansA | ECs2474 | cytoplasmic asparaginase I | chromosome | CDS | 2451163 | 1017 | + | 0.508358 |
cysS | ECs0588 | cysteinyl-tRNA synthetase | chromosome | CDS | 647063 | 1386 | + | 0.546898 |
def | ECs4152 | peptide deformylase | chromosome | CDS | 4168702 | 510 | + | 0.466667 |
frr | ECs0174 | ribosome releasing factor | chromosome | CDS | 196216 | 558 | + | 0.508961 |
gltX | ECs3278 | glutamyl-tRNA synthetase | chromosome | CDS | 3247787 | 1416 | - | 0.530367 |
glyQ | ECs4443 | glycyl-tRNA synthetase alpha subunit | chromosome | CDS | 4470577 | 912 | - | 0.555921 |
glyS | ECs4442 | glycyl-tRNA synthetase beta subunit | chromosome | CDS | 4468498 | 2070 | - | 0.554106 |
hisS | ECs3376 | histidyl-tRNA synthetase | chromosome | CDS | 3355442 | 1275 | - | 0.546667 |
infB | ECs4049 | translation initiation factor IF-2 | chromosome | CDS | 4055840 | 2673 | - | 0.534979 |
ksgA | ECs0056 | dimethyladenosine transferase | chromosome | CDS | 56584 | 822 | - | 0.53163 |
leuS | ECs0680 | leucyl-tRNA synthetase | chromosome | CDS | 753559 | 2583 | - | 0.531165 |
lysS | ECs3762 | lysyl-tRNA synthetase | chromosome | CDS | 3771806 | 1518 | - | 0.523715 |
lysS | ECs5111 | lysyl-tRNA synthetase | chromosome | CDS | 5207650 | 1518 | - | 0.47892 |
pheS | ECs2421 | phenylalanyl-tRNA synthetase alpha subunit | chromosome | CDS | 2397673 | 984 | - | 0.54065 |
rnpA | ECs4639 | ribonuclease P | chromosome | CDS | 4670726 | 360 | + | 0.555556 |
rph | ECs4518 | ribonuclease PH | chromosome | CDS | 4559693 | 717 | - | 0.570432 |
rplJ | ECs4908 | 50S ribosomal protein L10 | chromosome | CDS | 4988892 | 498 | + | 0.524096 |
rplK | ECs4906 | 50S ribosomal protein L11 | chromosome | CDS | 4987464 | 429 | + | 0.519814 |
rplV | ECs4180 | 50S ribosomal protein L22 | chromosome | CDS | 4184913 | 333 | - | 0.498498 |
rpmC | ECs4177 | 50S ribosomal protein L29 | chromosome | CDS | 4183580 | 192 | - | 0.541667 |
rpmI | ECs2424 | 50S ribosomal protein L35 | chromosome | CDS | 2399515 | 213 | - | 0.483568 |
rpsC | ECs4179 | 30S ribosomal protein S3 | chromosome | CDS | 4184194 | 702 | - | 0.509971 |
rpsE | ECs4168 | 30S ribosomal protein S5 | chromosome | CDS | 4179738 | 504 | - | 0.498016 |
rpsF | ECs5176 | 30S ribosomal protein S6 | chromosome | CDS | 5278844 | 396 | + | 0.527778 |
rpsR | ECs5178 | 30S ribosomal protein S18 | chromosome | CDS | 5279565 | 228 | + | 0.526316 |
rpsS | ECs4181 | 30S ribosomal protein S19 | chromosome | CDS | 4185260 | 279 | - | 0.491039 |
rpsT | ECs0026 | 30S ribosomal protein S20 | chromosome | CDS | 25220 | 264 | - | 0.465909 |
rsmC | ECs5329 | 16S ribosomal RNA m2G1207 methyltransferase | chromosome | CDS | 5464715 | 1032 | - | 0.556202 |
rumA | ECs3645 | 23S rRNA (uracil-5-)-methyltransferase | chromosome | CDS | 3636098 | 1302 | - | 0.513057 |
trmD | ECs3470 | tRNA (guanine-N(1)-)-methyltransferase | chromosome | CDS | 3464692 | 768 | - | 0.53125 |
truA | ECs3202 | tRNA pseudouridine synthase A | chromosome | CDS | 3161177 | 813 | - | 0.557196 |
truB | ECs4047 | tRNA pseudouridine synthase B | chromosome | CDS | 4054330 | 945 | - | 0.529101 |
tsf | ECs0172 | elongation factor Ts | chromosome | CDS | 194343 | 852 | + | 0.497653 |
tuf | ECs4190 | elongation factor Tu | chromosome | CDS | 4190051 | 1185 | - | 0.531646 |
tuf | ECs4903 | elongation factor Tu | chromosome | CDS | 4984961 | 1185 | + | 0.533333 |