Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 186
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Yersinia pestis Nepal516, Nepal516 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | YPN_0817 | sigma 54 modulation protein | SubName: Full=Protein Y, associated with 30S ribosomal subunit; SubName: Full=Sigma 54 modulation protein / sigma 54 modulation protein / SSU ribosomal protein S30P; | chromosome | CDS | 946851 | 363 | - | 0.446281 |
| NA | YPN_3856 | 50S ribosomal protein l2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4395863 | 825 | - | 0.515152 |
| NA | YPN_3445 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 3932617 | 429 | - | 0.496504 |
| NA | YPN_0491 | translational inhibitor protein | SubName: Full=Putative translational inhibitor protein; SubName: Full=Translational inhibitor protein; | chromosome | CDS | 600272 | 405 | + | 0.511111 |
| NA | YPN_2591 | L-asparaginase II precursor | SubName: Full=Asparaginase; EC=3.5.1.1; SubName: Full=Periplasmic L-asparaginase II; EC=3.5.1.1; Flags: Precursor; | chromosome | CDS | 2918842 | 1038 | - | 0.467245 |
| NA | YPN_3828 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4379335 | 948 | + | 0.470464 |
| NA | YPN_0712 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 836442 | 126 | + | 0.507937 |
| NA | YPN_2957 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 3317771 | 726 | - | 0.477961 |
| NA | YPN_0645 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; | chromosome | CDS | 755633 | 2898 | - | 0.519669 |
| NA | YPN_0490 | translational inhibitor protein | SubName: Full=Putative translational inhibitor protein; SubName: Full=Translational inhibitor protein; | chromosome | CDS | 599607 | 381 | + | 0.354331 |
| NA | YPN_3717 | glycyl-tRNA synthetase beta subunit | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 4266799 | 2070 | - | 0.523188 |
| NA | YPN_2181 | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 2465120 | 882 | - | 0.50907 |
| NA | YPN_0270 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 337015 | 537 | + | 0.409683 |
| NA | YPN_3852 | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4394084 | 411 | - | 0.508516 |
| NA | YPN_3956 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 4501301 | 141 | + | 0.510638 |
| NA | YPN_0339 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 412822 | 2448 | - | 0.35335 |
| NA | YPN_1523 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 1731717 | 1731 | - | 0.498556 |
| NA | YPN_0956 | ribosomal protein | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 1109825 | 261 | - | 0.467433 |
| NA | YPN_2803 | hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 3159462 | 945 | - | 0.486772 |
| NA | YPN_0806 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 937181 | 348 | + | 0.477012 |
| NA | YPN_1552 | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 1764913 | 1161 | + | 0.477175 |
| NA | YPN_0805 | tRNA (guanine-N1)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 936360 | 741 | + | 0.523617 |
| NA | YPN_1679 | hypothetical protein | SubName: Full=Predicted RNA-binding protein; SubName: Full=Translation factor SUA5; | chromosome | CDS | 1894155 | 621 | + | 0.460548 |
| NA | YPN_3847 | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4392208 | 540 | - | 0.488889 |
| NA | YPN_0212 | elongation factor Tu | SubName: Full=Elongation factor Tu; | chromosome | CDS | 263737 | 174 | + | 0.488506 |
| NA | YPN_0056 | tRNA (uracil-5)-methyltransferase | RecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; | chromosome | CDS | 79266 | 1104 | - | 0.477355 |
| NA | YPN_3255 | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 3714540 | 258 | - | 0.488372 |
| NA | YPN_3813 | tRNA (guanosine-2'-O-)-methyltransferase | SubName: Full=tRNA (Guanosine-2-O-)-methyltransferase; EC=2.1.1.34; | chromosome | CDS | 4363498 | 693 | + | 0.496392 |
| NA | YPN_1886 | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 2130808 | 198 | - | 0.459596 |
| NA | YPN_3465 | sigma N modulation factor | SubName: Full=Putative sigma-54 modulation protein; SubName: Full=Sigma N modulation factor; | chromosome | CDS | 3950487 | 108 | + | 0.361111 |
| NA | YPN_3248 | hypothetical protein | SubName: Full=Predicted RNA-binding protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3707863 | 294 | + | 0.438776 |
| NA | YPN_2933 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 3294101 | 441 | - | 0.489796 |
| NA | YPN_3837 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4387015 | 390 | - | 0.502564 |
| NA | YPN_0835 | amidase | SubName: Full=Amidase; SubName: Full=Probable amidase; | chromosome | CDS | 973475 | 1398 | - | 0.550072 |
| NA | YPN_2806 | Helicase | SubName: Full=Helicase; SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 3162713 | 1005 | - | 0.514428 |
| NA | YPN_0298 | ribosomal RNA small subunit methyltransferase C | RecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; | chromosome | CDS | 366906 | 1044 | - | 0.521073 |
| NA | YPN_1477 | hypothetical protein | SubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1681148 | 1074 | - | 0.485102 |
| NA | YPN_0366 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 442168 | 819 | - | 0.47619 |
| NA | YPN_3841 | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4389852 | 180 | - | 0.433333 |
| NA | YPN_1888 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 2131657 | 1929 | - | 0.473302 |
| NA | YPN_3864 | elongation factor Tu | RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; | chromosome | CDS | 4400607 | 1185 | - | 0.481857 |
| NA | YPN_0804 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 935773 | 549 | + | 0.468124 |
| NA | YPN_1491 | hypothetical protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 1693426 | 1092 | - | 0.495421 |
| NA | YPN_0301 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 369066 | 1590 | + | 0.497484 |
| NA | YPN_3859 | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4397625 | 630 | - | 0.488889 |
| NA | YPN_1499 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1700520 | 1083 | + | 0.514312 |
| NA | YPN_1398 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 1589677 | 1416 | - | 0.492232 |
| NA | YPN_0217 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 266783 | 498 | + | 0.493976 |
| NA | YPN_0819 | ribosomal large subunit pseudouridine synthase D | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 948435 | 978 | + | 0.482618 |
| NA | YPN_3799 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 4350702 | 168 | - | 0.392857 |
| NA | YPN_0803 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 935503 | 249 | + | 0.502008 |
| NA | YPN_3857 | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4396704 | 303 | - | 0.485149 |
| NA | YPN_3517 | hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 4015676 | 966 | + | 0.518634 |
| NA | YPN_3957 | ribonuclease P protein | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 4501460 | 360 | + | 0.508333 |
| NA | YPN_3823 | hypothetical protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 4375943 | 573 | - | 0.467714 |
| NA | YPN_2037 | ribosomal large subunit pseudouridine synthase C | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2298163 | 963 | - | 0.503634 |
| NA | YPN_0211 | Translation elongation factor Tu | RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; | chromosome | CDS | 262725 | 1011 | + | 0.476756 |
| NA | YPN_3853 | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4394507 | 699 | - | 0.493562 |
| NA | YPN_3644 | periplasmic pectate lyase precursor | SubName: Full=Periplasmic pectate lyase; EC=4.2.2.2; Flags: Precursor; | chromosome | CDS | 4176187 | 1719 | - | 0.4968 |
| NA | YPN_1476 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1679452 | 906 | - | 0.40287 |
| NA | YPN_1887 | translation initiation factor IF-3 | SubName: Full=Bacterial translation initiation factor 3 (BIF-3); SubName: Full=Translation initiation factor 3; | chromosome | CDS | 2131102 | 351 | - | 0.475783 |
| NA | YPN_3247 | ribosomal RNA large subunit methyltransferase J | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 3707087 | 630 | - | 0.455556 |
| NA | YPN_0347 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 423938 | 2817 | + | 0.500887 |
| NA | YPN_3700 | Translation elongation factor, selenocysteine-specific | SubName: Full=Selenocysteine-specific translation elongation factor SelB; SubName: Full=Selenocysteine-specific translation elongationfactor; | chromosome | CDS | 4245136 | 1953 | - | 0.55658 |
| NA | YPN_3444 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 3932210 | 393 | - | 0.493639 |
| NA | YPN_3239 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 3696563 | 411 | - | 0.445255 |
| NA | YPN_3800 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 4350881 | 237 | - | 0.506329 |
| NA | YPN_3846 | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4391889 | 306 | - | 0.513072 |
| NA | YPN_1216 | zinc-binding protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 1379199 | 564 | + | 0.537234 |
| NA | YPN_1697 | translation initiation factor SUI1 family protein | SubName: Full=Translation initiation factor; SubName: Full=Translation initiation factor 1 (EIF-1/SUI1); | chromosome | CDS | 1913191 | 327 | + | 0.477064 |
| NA | YPN_0499 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 606690 | 471 | + | 0.422505 |
| NA | YPN_3299 | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 3758471 | 942 | - | 0.511677 |
| NA | YPN_3860 | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4398287 | 312 | - | 0.525641 |
| NA | YPN_3843 | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4390552 | 354 | - | 0.516949 |
| NA | YPN_3088 | peptide chain release factor 2 | SubName: Full=Bacterial peptide chain release factor 2 (BRF-2); | chromosome | CDS | 3471126 | 933 | - | 0.46731 |
| NA | YPN_2712 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; | chromosome | CDS | 3062646 | 285 | + | 0.463158 |
| NA | YPN_0695 | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; | chromosome | CDS | 813332 | 576 | - | 0.565972 |
| NA | YPN_0457 | methyltransferase | RecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; | chromosome | CDS | 553609 | 1188 | + | 0.495791 |
| NA | YPN_3840 | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4389414 | 435 | - | 0.510345 |
| NA | YPN_2814 | DEAD/DEAH box helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 3168240 | 1356 | - | 0.517699 |
| NA | YPN_2710 | ribosomal small subunit pseudouridine synthase A | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3059506 | 708 | - | 0.519774 |
| NA | YPN_2953 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 3315159 | 558 | - | 0.47491 |
| NA | YPN_3829 | hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; | chromosome | CDS | 4380376 | 1290 | + | 0.460465 |
| NA | YPN_3780 | methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 4332862 | 489 | + | 0.490798 |
| NA | YPN_1991 | pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2252692 | 627 | + | 0.492823 |
| NA | YPN_1883 | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 2128932 | 984 | - | 0.47561 |
| NA | YPN_0599 | cold-shock dead-box protein A | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 709838 | 1995 | + | 0.535338 |
| NA | YPN_1961 | YjgF-family lipoprotein | SubName: Full=YjgF-family lipoprotein; | chromosome | CDS | 2218282 | 378 | + | 0.417989 |
| NA | YPN_0218 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 267347 | 369 | + | 0.468835 |
| NA | YPN_3851 | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4393893 | 192 | - | 0.5 |
| NA | YPN_1627 | L-asparaginase I | SubName: Full=Asparaginase; EC=3.5.1.1; SubName: Full=Cytoplasmic L-asparaginase I; EC=3.5.1.1; | chromosome | CDS | 1838658 | 1017 | - | 0.476893 |
| NA | YPN_3280 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 3740817 | 453 | - | 0.494481 |
| NA | YPN_2449 | siderophore biosynthetic enzyme | SubName: Full=Putative siderophore biosynthetic enzyme; SubName: Full=Siderophore biosynthetic enzyme; | chromosome | CDS | 2742171 | 579 | - | 0.483592 |
| NA | YPN_2964 | hypothetical protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3325253 | 774 | - | 0.48708 |
| NA | YPN_0895 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 1047994 | 1086 | + | 0.512891 |
| NA | YPN_3087 | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 3469599 | 1518 | - | 0.479578 |
| NA | YPN_1260 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 1435273 | 1275 | + | 0.507451 |
| NA | YPN_3256 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 3714817 | 312 | - | 0.455128 |
| NA | YPN_3132 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 3523101 | 960 | + | 0.491667 |
| NA | YPN_3834 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4384919 | 390 | - | 0.54359 |
| NA | YPN_1885 | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 2130414 | 357 | - | 0.498599 |
| NA | YPN_2585 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2909858 | 1674 | - | 0.479092 |
| NA | YPN_1116 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 1282571 | 1668 | + | 0.495803 |
| NA | YPN_0597 | polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 706447 | 2196 | + | 0.498179 |
| NA | YPN_1017 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1175645 | 1386 | + | 0.497835 |
| NA | YPN_3309 | lysyl-tRNA synthetase | RecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; | chromosome | CDS | 3773974 | 978 | - | 0.492843 |
| NA | YPN_3283 | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 3741867 | 393 | - | 0.508906 |
| NA | YPN_1196 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 1359772 | 1326 | - | 0.505279 |
| NA | YPN_3718 | glycyl-tRNA synthetase alpha subunit | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 4268878 | 915 | - | 0.527869 |
| NA | YPN_3849 | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4393087 | 372 | - | 0.502688 |
| NA | YPN_3189 | siderophore biosynthesis protein IucB | SubName: Full=Putative siderophore biosynthesis protein IucB; SubName: Full=Siderophore biosynthesis protein IucB; | chromosome | CDS | 3595267 | 951 | + | 0.554154 |
| NA | YPN_1874 | formyl transferase | RecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; | chromosome | CDS | 2118323 | 2004 | - | 0.457585 |
| NA | YPN_0505 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 612663 | 216 | - | 0.462963 |
| NA | YPN_3865 | elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4401864 | 2109 | - | 0.480797 |
| NA | YPN_3867 | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4404633 | 375 | - | 0.506667 |
| NA | YPN_1547 | hypothetical protein | SubName: Full=Conserved protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1758570 | 345 | - | 0.486957 |
| NA | YPN_3838 | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4387421 | 357 | - | 0.504202 |
| NA | YPN_2958 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 3318931 | 792 | + | 0.488636 |
| NA | YPN_1993 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2253944 | 1116 | + | 0.499104 |
| NA | YPN_0216 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 265714 | 705 | + | 0.47234 |
| NA | YPN_1518 | ribosomal-protein-alanine acetyltransferase | SubName: Full=Ribosomal-protein-S5-alanine N-acetyltransferase; EC=2.3.1.128; SubName: Full=Ribosomal-protein-alanine acetyltransferase; | chromosome | CDS | 1720573 | 585 | + | 0.483761 |
| NA | YPN_2694 | elongation factor P | RecName: Full=Elongation factor P-like protein; | chromosome | CDS | 3040615 | 573 | + | 0.460733 |
| NA | YPN_0345 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 422290 | 264 | - | 0.465909 |
| NA | YPN_2196 | hypothetical protein | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 2481793 | 933 | - | 0.488746 |
| NA | YPN_0827 | tRNA/rRNA methyltransferase | SubName: Full=Predicted methyltransferase; EC=2.1.1.-; SubName: Full=tRNA/rRNA methyltransferase; | chromosome | CDS | 965178 | 1167 | + | 0.533847 |
| NA | YPN_3827 | polypeptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 4378798 | 513 | + | 0.452242 |
| NA | YPN_3353 | hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 3821494 | 1038 | - | 0.519268 |
| NA | YPN_3854 | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4395223 | 333 | - | 0.501502 |
| NA | YPN_1308 | spermidine acetyltransferase | SubName: Full=Spermidine acetyltransferase; EC=2.3.1.57; SubName: Full=Spermine/spermidine N-acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 1492534 | 546 | - | 0.39011 |
| NA | YPN_3502 | ribonuclease G | SubName: Full=RNAse G; EC=3.1.4.-; SubName: Full=RNase G; EC=3.1.4.-; | chromosome | CDS | 3998021 | 1470 | - | 0.476871 |
| NA | YPN_1500 | protoporphyrinogen oxidase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 1701602 | 831 | + | 0.535499 |
| NA | YPN_3240 | translation initiation factor IF2-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 3697039 | 2679 | - | 0.4972 |
| NA | YPN_0371 | ribosomal large subunit pseudouridine synthase A | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 448988 | 621 | - | 0.489533 |
| NA | YPN_1106 | tRNA-thiotransferase | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 1268831 | 1440 | - | 0.48125 |
| NA | YPN_1239 | SpoU-family rRNA methylase | RecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; | chromosome | CDS | 1408458 | 774 | + | 0.502584 |
| NA | YPN_0255 | hypothetical protein | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 319811 | 438 | + | 0.488584 |
| NA | YPN_2341 | DNA polymerase III, theta subunit | SubName: Full=DNA polymerase III, theta subunit; EC=2.7.7.7; | chromosome | CDS | 2622434 | 231 | + | 0.441558 |
| NA | YPN_3925 | heat shock protein 15 | RecName: Full=Heat shock protein 15; | chromosome | CDS | 4464165 | 408 | + | 0.522059 |
| NA | YPN_3836 | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4386364 | 621 | - | 0.478261 |
| NA | YPN_2610 | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2946730 | 219 | + | 0.497717 |
| NA | YPN_3373 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3849553 | 1062 | + | 0.490584 |
| NA | YPN_2347 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 2628036 | 1383 | - | 0.501085 |
| NA | YPN_2038 | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2299700 | 3651 | + | 0.510819 |
| NA | YPN_3238 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 3695589 | 975 | - | 0.494359 |
| NA | YPN_2931 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 3291481 | 1719 | + | 0.499127 |
| NA | YPN_3290 | methylase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 3747959 | 741 | - | 0.538462 |
| NA | YPN_1826 | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 2062008 | 1275 | - | 0.488627 |
| NA | YPN_1095 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 1256956 | 2583 | - | 0.510647 |
| NA | YPN_3850 | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4393639 | 255 | - | 0.466667 |
| NA | YPN_3472 | hypothetical protein | SubName: Full=Ketoacid-binding protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3954690 | 387 | + | 0.483204 |
| NA | YPN_1492 | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1694681 | 621 | - | 0.47182 |
| NA | YPN_0974 | glucose-1-phosphate cytidylyltransferase | SubName: Full=Glucose-1-phosphate cytidylyltransferase; | chromosome | CDS | 1131264 | 786 | + | 0.437659 |
| NA | YPN_1530 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 1740232 | 1797 | + | 0.510295 |
| NA | YPN_3908 | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 4446332 | 1041 | - | 0.48415 |
| NA | YPN_2956 | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 3316786 | 858 | - | 0.480186 |
| NA | YPN_3743 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 4294630 | 216 | - | 0.490741 |
| NA | YPN_0510 | tRNA nucleotidyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 616988 | 1239 | - | 0.533495 |
| NA | YPN_0215 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 265282 | 429 | + | 0.487179 |
| NA | YPN_3842 | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4390034 | 504 | - | 0.484127 |
| NA | YPN_3855 | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4395570 | 279 | - | 0.505376 |
| NA | YPN_2894 | hypothetical protein | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 3256029 | 342 | + | 0.459064 |
| NA | YPN_0955 | ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 1109666 | 144 | - | 0.479167 |
| NA | YPN_3858 | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4397003 | 606 | - | 0.50165 |
| NA | YPN_3848 | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4392762 | 315 | - | 0.460317 |
| NA | YPN_2601 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 2931731 | 1293 | - | 0.491106 |
| NA | YPN_0691 | glutamyl-tRNA synthetase | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 810612 | 1155 | - | 0.500433 |
| NA | YPN_0789 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 921215 | 2628 | + | 0.5 |
| NA | YPN_3466 | hypothetical protein | SubName: Full=Ribosome hibernation protein YhbH; SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P; | chromosome | CDS | 3950601 | 174 | + | 0.385057 |
| NA | YPN_1680 | RNA pseudouridylate synthase-family protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1895139 | 1035 | + | 0.510145 |
| NA | YPN_3516 | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 4014173 | 915 | + | 0.53224 |
| NA | YPN_2554 | ribosome modulation factor | RecName: Full=Ribosome modulation factor; Short=RMF; | chromosome | CDS | 2865094 | 168 | - | 0.511905 |
| NA | YPN_0690 | poly(A) polymerase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 809048 | 1476 | - | 0.523713 |
| NA | YPN_3316 | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 3779467 | 567 | - | 0.485009 |
| NA | YPN_3376 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3852560 | 1080 | + | 0.525 |
| NA | YPN_2565 | asparaginyl-tRNA synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 2881825 | 1401 | + | 0.498929 |
| NA | YPN_3845 | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4391463 | 393 | - | 0.475827 |
| NA | YPN_3281 | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 3741309 | 228 | - | 0.473684 |
| NA | YPN_0756 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 883328 | 786 | - | 0.510178 |
| NA | YPN_2034 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 2296598 | 168 | - | 0.553571 |
| NA | YPN_0094 | DEAD-box helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 128478 | 1287 | - | 0.486402 |
| NA | YPN_3806 | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 4355562 | 717 | - | 0.51325 |
| NA | YPN_3844 | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4390915 | 534 | - | 0.513109 |
| NA | YPN_3237 | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 3695198 | 270 | - | 0.485185 |
| NA | YPN_3866 | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4404066 | 471 | - | 0.47983 |
| NA | YPN_0896 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 1049172 | 1125 | + | 0.490667 |
| NA | YPN_2644 | RNA methyltransferase | RecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; | chromosome | CDS | 2981409 | 1131 | - | 0.521662 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|