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2024-06-26 08:24:09

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome

Number of genes found: 91

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Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SF2678 hypothetical proteinRecName: Full=Ribosome association toxin RatA; chromosome CDS2752828 438 - 0.488584
NA SF1644 7-alpha-hydroxysteroid dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase-like protein; chromosome CDS1674136 621 - 0.454106
NA SF3023 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3121348 249 + 0.405622
NA SF1807 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1843770 711 - 0.479606
NA SF1467 putative cytochrome oxidaseSubName: Full=Putative cytochrome oxidase; chromosome CDS1502685 621 + 0.536232
NA SF2420 acetyl-CoA acetyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS2468122 1311 - 0.554539
NA SF3021 acyl-CoA synthaseSubName: Full=Uncharacterized protein; chromosome CDS3118716 1689 + 0.529307
NA SF2149 hypothetical proteinRecName: Full=Probable lipid kinase YegS; EC=2.7.1.-; chromosome CDS2174876 900 + 0.494444
NA SF4340 putative carnitine operon oxidoreductaseSubName: Full=Putative carnitine operon oxidoreductase; chromosome CDS4517759 1383 + 0.543022
NA SF2261 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2292057 714 + 0.438375
NA SF2875 isopentenyl-diphosphate delta-isomeraseRecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase; chromosome CDS2966981 549 + 0.513661
NA SF1810 probable enzymeSubName: Full=Probable enzyme; chromosome CDS1847099 606 - 0.458746
NA SF0315 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS328428 1173 + 0.339301
NA SF2419 putative enzymeRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS2465978 2145 - 0.52028
NA SF1603 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1630805 369 - 0.536585
aas SF2846 2-acyl-glycerophospho-ethanolamine acyltransferaseRecName: Full=Bifunctional protein Aas; Includes: RecName: Full=2-acylglycerophosphoethanolamine acyltransferase; EC=2.3.1.40; AltName: Full=2-acyl-GPE acyltransferase; AltName: Full=Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Includes: RecName: Full=Acyl-[acyl-carrier-protein] synthetase; EC=6.2.1.20; AltName: Full=Acyl-ACP synthetase; AltName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase; chromosome CDS2934215 2160 - 0.525
accA SF0175 acetyl-CoA carboxylase alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS199565 960 + 0.527083
accB SF3293 acetyl-CoA carboxylaseRecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Short=BCCP; chromosome CDS3393008 471 + 0.518047
accC SF3294 acetyl-CoA carboxylaseSubName: Full=Acetyl CoA carboxylase, biotin carboxylase subunit; chromosome CDS3393489 1350 + 0.532593
accD SF2392 acetyl-CoA carboxylase beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2441124 915 - 0.551913
acpD SF1803 acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS1841205 606 + 0.516502
acpP SF1098 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; AltName: Full=Cytosolic-activating factor; Short=CAF; AltName: Full=Fatty acid synthase acyl carrier protein; chromosome CDS1139332 237 + 0.481013
acpS SF2625 4'-phosphopantetheinyl transferaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS2697833 381 - 0.503937
caiA SF0036 crotonobetainyl-CoA dehydrogenaseRecName: Full=Crotonobetainyl-CoA dehydrogenase; EC=1.3.99.-; AltName: Full=Crotonobetainyl-CoA reductase; chromosome CDS38674 1143 - 0.538933
caiC SF0034 crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS35701 1569 - 0.50733
caiD SF0033 carnitinyl-CoA dehydrataseRecName: Full=Carnitinyl-CoA dehydratase; EC=4.2.1.149; AltName: Full=Crotonobetainyl-CoA hydratase; chromosome CDS34807 894 - 0.524608
cdh SF3996 CDP-diacylglycerol pyrophosphataseRecName: Full=CDP-diacylglycerol pyrophosphatase; EC=3.6.1.26; AltName: Full=CDP-diacylglycerol phosphatidylhydrolase; AltName: Full=CDP-diglyceride hydrolase; chromosome CDS4124913 756 + 0.486772
cdsA SF0165 CDP-diglyceride synthetaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; AltName: Full=CDP-DAG synthase; AltName: Full=CDP-DG synthase; AltName: Full=CDP-diacylglycerol synthase; Short=CDS; AltName: Full=CDP-diglyceride pyrophosphorylase; AltName: Full=CDP-diglyceride synthase; AltName: Full=CTP:phosphatidate cytidylyltransferase; chromosome CDS186729 750 + 0.501333
cls SF1250 cardiolipin synthetaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome CDS1302240 1461 - 0.516085
csgE SF1033 Curli production assembly/transport component CsgE precursorSubName: Full=Curli production assembly/transport component CsgE; chromosome CDS1078313 390 - 0.428205
dxs SF0357 1-deoxy-D-xylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS367687 1863 - 0.539452
entA SF0510 2,3-dihydroxybenzoate-2,3-dehydrogenaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; chromosome CDS531914 747 + 0.575636
fabA SF0954 3-hydroxydecanoyl-ACP dehydrataseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS1003019 519 - 0.531792
fabB SF2399 3-oxoacyl-(acyl carrier protein) synthaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS2448487 1242 - 0.561192
fabD SF1096 acyl carrier protein S-malonyltransferaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1137445 930 + 0.550538
fabF SF1099 3-oxoacyl-(acyl carrier protein) synthaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II; chromosome CDS1139654 1242 + 0.533011
fabG SF1097 3-ketoacyl-(acyl-carrier-protein) reductaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase; chromosome CDS1138387 735 + 0.514286
fabG SF4282 3-ketoacyl-(acyl-carrier-protein) reductaseSubName: Full=Uncharacterized protein; chromosome CDS4460650 792 + 0.540404
fabH SF1095 3-oxoacyl-(acyl carrier protein) synthaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1136476 954 + 0.544025
fabI SF1293 enoyl-(acyl carrier protein) reductaseRecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Short=ENR; EC=1.3.1.9; AltName: Full=NADH-dependent enoyl-ACP reductase; chromosome CDS1344523 789 - 0.532319
fabZ SF0170 (3R)-hydroxymyristoyl ACP dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS193045 456 + 0.504386
fadA SF3921 acetyl-CoA acetyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS4040560 1164 - 0.582474
fadB SF3922 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratasRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS4041733 2190 - 0.551142
fadD SF1423 acyl-CoA synthaseSubName: Full=Acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase; chromosome CDS1460476 1752 + 0.511986
fadE SF0271 acyl-CoA dehydrogenaseSubName: Full=Putative acyl-CoA dehydrogenase; chromosome CDS289022 2481 - 0.559049
fadL SF2421 transport of long-chain fatty acidsRecName: Full=Long-chain fatty acid transport protein; AltName: Full=Outer membrane FadL protein; AltName: Full=Outer membrane flp protein; Flags: Precursor; chromosome CDS2470268 1341 + 0.499627
gcpE SF2561 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS2630130 1128 - 0.531915
hcaB SF2588 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenaseRecName: Full=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase; EC=1.3.1.87; AltName: Full=2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; AltName: Full=3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase; AltName: Full=CI-dihydrodiol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=PP-dihydrodiol dehydrogenase; chromosome CDS2656078 813 + 0.560886
ispD SF2770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS2843917 711 - 0.551336
ispF SF2769 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS2843438 480 - 0.535417
kduD SF2852 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS2942858 762 - 0.519685
lytB SF0026 4-hydroxy-3-methylbut-2-enyl diphosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS25707 951 + 0.550999
menE SF2339 O-succinylbenzoic acid--CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS2386378 1356 - 0.562684
pgpA SF0355 phosphatidylglycerophosphataseRecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS366086 519 + 0.527938
pgpB SF1282 non-essential phosphatidylglycerophosphate phosphataseRecName: Full=Phosphatidylglycerophosphatase B; EC=3.1.3.27; AltName: Full=Diacylglycerol pyrophosphate phosphatase; Short=DGPP phosphatase; EC=3.1.3.81; AltName: Full=Phosphatidate phosphatase; EC=3.1.3.4; AltName: Full=Undecaprenyl pyrophosphate phosphatase; EC=3.6.1.27; AltName: Full=Undecaprenyl-diphosphatase; chromosome CDS1333614 765 + 0.500654
pgsA SF1955 phosphatidylglycerophosphate synthetase, CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferaseRecName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; AltName: Full=Phosphatidylglycerophosphate synthase; Short=PGP synthase; chromosome CDS1988552 549 - 0.52459
pldB SF3903 lysophospholipase L(2)SubName: Full=Lysophospholipase L(2); chromosome CDS4022312 1023 + 0.536657
plsB SF4164 glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome CDS4333256 2484 + 0.548309
plsC SF3062 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; chromosome CDS3158185 738 - 0.49458
plsX SF1094 fatty acid/phospholipid synthesis proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1135368 1041 + 0.519693
psd SF4318 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS4493979 969 - 0.530444
pssA SF2647 phosphatidylserine synthaseSubName: Full=Phosphatidylserine synthase; chromosome CDS2719768 1356 + 0.489676
sbm SF2902 methylmalonyl-CoA mutaseSubName: Full=Methylmalonyl-CoA mutase (MCM); chromosome CDS2995111 2145 + 0.547319
sbmA SF0236 possible envelope proteinSubName: Full=Possible envelope protein; chromosome CDS258498 1221 - 0.510238
sorD SF4093 sorbitol-6-phosphate 2-dehydrogenaseSubName: Full=Putative sorbitol-6-phosphate 2-dehydrogenase; chromosome CDS4251932 807 - 0.509294
srlD SF2728 sorbitol-6-phosphate 2-dehydrogenaseSubName: Full=Glucitol (Sorbitol)-6-phosphate dehydrogenase; chromosome CDS2801410 780 + 0.530769
tesB SF0397 acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; chromosome CDS409394 861 - 0.524971
ucpA SF2480 short chain dehydrogenaseSubName: Full=Putative oxidoreductase; chromosome CDS2541136 792 - 0.54798
wecF SF3868 putative enterobacterial common antigen polymeraseRecName: Full=Putative ECA polymerase; chromosome CDS3987166 1353 + 0.518847
yaeM SF0163 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS184465 1197 + 0.524645
yaeS SF0164 hypothetical proteinRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome CDS185847 762 + 0.493438
ybaC SF0421 putative lipaseRecName: Full=Acetyl esterase; EC=3.1.1.-; chromosome CDS435576 819 - 0.507937
ybbO SF0438 short chain dehydrogenaseSubName: Full=Putative oxidoreductase; chromosome CDS454660 810 - 0.537037
ybcQ SF0688 putative Q proteinSubName: Full=Putative Q protein; chromosome CDS720285 381 + 0.485564
ybhO SF0739 putative synthetaseRecName: Full=Cardiolipin synthase B; Short=CL synthase; EC=2.7.8.-; chromosome CDS765325 1242 - 0.543478
ybjG SF0794 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS828215 597 - 0.519263
ychB SF1211 4-diphosphocytidyl-2-C-methyl-D-erythritol kinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS1258907 852 - 0.532864
yciA SF1256 hypothetical proteinRecName: Full=Acyl-CoA thioester hydrolase YciA; EC=3.1.2.-; chromosome CDS1308170 399 - 0.483709
yciK SF1273 short chain dehydrogenaseSubName: Full=Putative oxidoreductase; chromosome CDS1322638 759 - 0.524374
ydgB SF1627 short chain dehydrogenaseRecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; chromosome CDS1655613 723 + 0.50899
ydiD SF1529 hypothetical proteinSubName: Full=Putative ligase/synthetase; chromosome CDS1562330 1701 - 0.496767
ygfF SF2888 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2979072 744 - 0.549731
ygfG SF2904 putative enzymeSubName: Full=Putative enzyme; chromosome CDS2998212 828 + 0.480676
yghA SF3049 oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3145103 885 + 0.545763
yhaE SF3162 putative dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS3263361 900 - 0.526667
yhbT SF3198 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3292959 525 - 0.51619
yihG SF3933 putative endonucleaseSubName: Full=Putative endonuclease; chromosome CDS4058358 933 - 0.454448
yihU SF3954 putative dehydrogenaseRecName: Full=3-sulfolactaldehyde reductase; Short=SLA reductase; EC=1.1.1.-; chromosome CDS4085320 897 - 0.552954
yjgI SF4241 oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS4413064 714 + 0.539216
ymdC SF1042 putative synthaseSubName: Full=Putative synthase; chromosome CDS1083600 1482 + 0.505398
yqeF SF2854 acetyl-CoA acetyltransferaseSubName: Full=Putative acyltransferase; chromosome CDS2944772 1182 - 0.536379