Gene list
Applied filters:
COG category: Coenzyme transport and metabolism
Genomic element: chromosome
Number of genes found: 144
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella sonnei Ss046, Ss046 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SSON_1571 | hypothetical protein | chromosome | CDS | 1650912 | 708 | + | 0.522599 |
NA | SSON_1489 | hypothetical protein | chromosome | CDS | 1564972 | 306 | - | 0.447712 |
NA | SSON_2464 | putative enzyme | chromosome | CDS | 2603424 | 1695 | - | 0.466077 |
apbA | SSON_0402 | ApbA | chromosome | CDS | 428573 | 912 | - | 0.519737 |
bioA | SSON_0753 | 7,8-diaminopelargonic acid synthetase | chromosome | CDS | 797054 | 1290 | - | 0.562016 |
bioB | SSON_0754 | biotin synthesis | chromosome | CDS | 798430 | 1041 | + | 0.551393 |
bioD | SSON_0757 | dethiobiotin synthetase | chromosome | CDS | 801356 | 678 | + | 0.536873 |
bioF | SSON_0755 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 799467 | 1155 | + | 0.585281 |
birA | SSON_4146 | biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor | chromosome | CDS | 4392213 | 966 | + | 0.496894 |
btuB | SSON_4139 | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 | chromosome | CDS | 4383024 | 1845 | + | 0.501355 |
btuC | SSON_1447 | vitamin B12 transport permease protein | chromosome | CDS | 1521504 | 981 | + | 0.552497 |
btuD | SSON_1449 | ATP-binding component of vitamin B12 transport system | chromosome | CDS | 1523098 | 750 | + | 0.544 |
btuR | SSON_1873 | cob(I)alamin adenolsyltransferase | chromosome | CDS | 1971955 | 591 | + | 0.509306 |
citG | SSON_0565 | hypothetical protein | chromosome | CDS | 605634 | 879 | - | 0.546075 |
coaA | SSON_4147 | pantothenate kinase | chromosome | CDS | 4393207 | 951 | - | 0.443743 |
cobS | SSON_2053 | cobalamin 5'-phosphate synthase | chromosome | CDS | 2152482 | 744 | - | 0.532258 |
cobT | SSON_2052 | nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase | chromosome | CDS | 2151391 | 1080 | - | 0.524074 |
cobU | SSON_2054 | cobinamide kinase/cobinamide phosphate guanylyltransferase | chromosome | CDS | 2153222 | 546 | - | 0.509158 |
cysD | SSON_2900 | ATP-sulfurylase subunit 2 | chromosome | CDS | 3039065 | 909 | - | 0.533553 |
cysG | SSON_3499 | uroporphyrinogen III methylase; sirohaeme biosynthesis | chromosome | CDS | 3659827 | 1374 | + | 0.54294 |
cysH | SSON_2915 | 3'-phosphoadenosine 5'-phosphosulfate reductase | chromosome | CDS | 3053416 | 735 | - | 0.502041 |
dfp | SSON_3767 | flavoprotein affecting synthesis of DNA and pantothenate metabolism | chromosome | CDS | 3953154 | 1293 | - | 0.530549 |
dxs | SSON_0397 | 1-deoxyxylulose-5-phosphate synthase; flavoprotein | chromosome | CDS | 423284 | 1863 | - | 0.543747 |
entC | SSON_0544 | isochorismate hydroxymutase 2 | chromosome | CDS | 584416 | 1176 | + | 0.562925 |
fecE | SSON_4459 | ATP-binding component of citrate-dependent iron(III) transport protein | chromosome | CDS | 4730804 | 768 | - | 0.53776 |
fepC | SSON_0539 | ATP-binding component of ferric enterobactin transport | chromosome | CDS | 578829 | 816 | - | 0.536765 |
fhuC | SSON_0163 | ATP-binding component of hydroxymate-dependent iron transport | chromosome | CDS | 183921 | 798 | + | 0.562657 |
folA | SSON_0056 | dihydrofolate reductase type I | chromosome | CDS | 59159 | 480 | + | 0.53125 |
folC | SSON_2373 | dihydrofolate:folylpolyglutamate synthetase | chromosome | CDS | 2503442 | 1269 | - | 0.55792 |
folD | SSON_0489 | 5,10-methylene-tetrahydrofolate dehydrogenase | chromosome | CDS | 519544 | 867 | + | 0.546713 |
folE | SSON_2209 | GTP cyclohydrolase I | chromosome | CDS | 2315802 | 669 | - | 0.505232 |
folK | SSON_0154 | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase | chromosome | CDS | 171450 | 480 | - | 0.516667 |
folP | SSON_3325 | 7,8-dihydropteroate synthase | chromosome | CDS | 3503136 | 894 | - | 0.512304 |
folX | SSON_2360 | D-erythro-7,8-dihydroneopterin tri P epimerase | chromosome | CDS | 2492316 | 363 | + | 0.443526 |
gshA | SSON_2832 | gamma-glutamate-cysteine ligase | chromosome | CDS | 2976107 | 1557 | - | 0.512524 |
gshB | SSON_3101 | glutathione synthetase | chromosome | CDS | 3263604 | 951 | + | 0.534175 |
hemA | SSON_1968 | enzyme in alternate path of synthesis of 5-aminolevulinate | chromosome | CDS | 2069786 | 1257 | - | 0.539379 |
hemB | SSON_0347 | 5-aminolevulinate dehydratase | chromosome | CDS | 372834 | 1008 | - | 0.536706 |
hemC | SSON_3977 | porphobilinogen deaminase | chromosome | CDS | 4198963 | 963 | - | 0.554517 |
hemD | SSON_3976 | uroporphyrinogen III synthase | chromosome | CDS | 4198226 | 741 | - | 0.530364 |
hemE | SSON_4170 | uroporphyrinogen decarboxylase | chromosome | CDS | 4415928 | 1065 | + | 0.558685 |
hemF | SSON_2525 | coproporphyrinogen III oxidase | chromosome | CDS | 2661981 | 900 | + | 0.547778 |
hemG | SSON_4023 | protoporphyrin oxidase | chromosome | CDS | 4251862 | 546 | + | 0.507326 |
hemH | SSON_0462 | ferrochelatase | chromosome | CDS | 490139 | 963 | + | 0.544133 |
hemL | SSON_0166 | glutamate-1-semialdehyde aminotransferase (aminomutase) | chromosome | CDS | 187745 | 1281 | - | 0.555816 |
hemN | SSON_4039 | O2-independent coproporphyrinogen III oxidase | chromosome | CDS | 4268979 | 1380 | + | 0.531159 |
hemX | SSON_3975 | uroporphyrinogen III methylase | chromosome | CDS | 4196987 | 1218 | - | 0.541872 |
hemY | SSON_3974 | HemY | chromosome | CDS | 4195788 | 1197 | - | 0.544695 |
ilvB | SSON_3625 | valine-sensitive acetolactate synthase large subunit | chromosome | CDS | 3794112 | 1689 | - | 0.558911 |
ilvC | SSON_3945 | ketol-acid reductoisomerase | chromosome | CDS | 4167325 | 1476 | + | 0.544715 |
ilvE | SSON_3941 | branched-chain amino-acid aminotransferase | chromosome | CDS | 4161839 | 930 | + | 0.548387 |
ilvG | SSON_3939 | Acetolactate synthase II, large subunit | chromosome | CDS | 4159913 | 1647 | + | 0.544019 |
ilvI | SSON_0084 | acetolactate synthase isozyme III large subunit | chromosome | CDS | 94190 | 1725 | + | 0.527536 |
ispA | SSON_0398 | geranyltranstransferase | chromosome | CDS | 425171 | 900 | - | 0.542222 |
ispB | SSON_3335 | octaprenyl diphosphate synthase | chromosome | CDS | 3512783 | 972 | + | 0.524691 |
kbl | SSON_3787 | 2-amino-3-ketobutyrate CoA ligase | chromosome | CDS | 3972135 | 1197 | + | 0.542189 |
kdtB | SSON_3773 | putative enzyme of lipopolysaccharide synthesis | chromosome | CDS | 3957578 | 480 | - | 0.529167 |
ldhA | SSON_1744 | fermentative D-lactate dehydrogenase, NAD-dependent | chromosome | CDS | 1849006 | 990 | + | 0.50404 |
lipA | SSON_0582 | LipA | chromosome | CDS | 620533 | 966 | - | 0.533126 |
lipB | SSON_0584 | protein of lipoate biosynthesis | chromosome | CDS | 622920 | 576 | - | 0.473958 |
lplA | SSON_4536 | lipoate-protein ligase A | chromosome | CDS | 4806768 | 1017 | - | 0.576205 |
menA | SSON_4099 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | chromosome | CDS | 4333463 | 927 | - | 0.533981 |
menB | SSON_2323 | dihydroxynaphtoic acid synthetase | chromosome | CDS | 2451797 | 858 | - | 0.548951 |
menC | SSON_2322 | O-succinylbenzoyl-CoA synthase | chromosome | CDS | 2450835 | 963 | - | 0.58567 |
menD | SSON_2325 | 2-oxoglutarate decarboxylase | chromosome | CDS | 2453424 | 1671 | - | 0.582884 |
menF | SSON_2326 | isochorismate hydroxymutase 2 | chromosome | CDS | 2455183 | 1071 | - | 0.542484 |
menG | SSON_4098 | MenG | chromosome | CDS | 4332885 | 486 | - | 0.516461 |
metK | SSON_3096 | methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes | chromosome | CDS | 3258417 | 1155 | + | 0.532468 |
mhpA | SSON_0297 | 3-(3-hydroxyphenyl)propionate hydroxylase | chromosome | CDS | 324220 | 1665 | - | 0.568168 |
moaA | SSON_0760 | molybdopterin biosynthesis, protein A | chromosome | CDS | 806130 | 990 | + | 0.539394 |
moaB | SSON_0761 | molybdopterin biosynthesis, protein B | chromosome | CDS | 807141 | 513 | + | 0.524366 |
moaC | SSON_0762 | molybdopterin biosynthesis, protein C | chromosome | CDS | 807656 | 486 | + | 0.561728 |
moaD | SSON_0763 | molybdopterin biosynthesis | chromosome | CDS | 808134 | 246 | + | 0.569106 |
moaE | SSON_0764 | molybdopterin converting factor, subunit 2 | chromosome | CDS | 808381 | 453 | + | 0.573951 |
mobA | SSON_4029 | molybdopterin-guanine dinucleotide biosynthesis protein Ar | chromosome | CDS | 4258407 | 585 | - | 0.499145 |
mobB | SSON_4028 | molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 4257898 | 513 | - | 0.48538 |
moeA | SSON_0809 | molybdopterin biosynthesis | chromosome | CDS | 860382 | 1236 | - | 0.566343 |
moeB | SSON_0808 | molybdopterin biosynthesis | chromosome | CDS | 859633 | 750 | - | 0.557333 |
mog | SSON_0010 | required for the efficient incorporation of molybdate into molybdoproteins | chromosome | CDS | 10082 | 588 | + | 0.537415 |
nadC | SSON_0117 | quinolinate phosphoribosyltransferase | chromosome | CDS | 126980 | 894 | - | 0.533557 |
nadE | SSON_1418 | NAD synthetase | chromosome | CDS | 1492584 | 828 | - | 0.492754 |
nadR | SSON_4540 | probable nadAB transcriptional regulator | chromosome | CDS | 4810961 | 1254 | + | 0.504785 |
pabA | SSON_3491 | p-aminobenzoate synthetase, component II | chromosome | CDS | 3652265 | 564 | - | 0.537234 |
pabB | SSON_1348 | p-aminobenzoate synthetase, component I | chromosome | CDS | 1423168 | 1362 | - | 0.504405 |
pabC | SSON_1116 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1194591 | 810 | + | 0.504938 |
panB | SSON_0142 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 157995 | 795 | - | 0.54717 |
panC | SSON_0141 | pantothenate synthetase | chromosome | CDS | 157132 | 852 | - | 0.530516 |
panD | SSON_0139 | aspartate 1-decarboxylase | chromosome | CDS | 155290 | 381 | - | 0.524934 |
panF | SSON_3399 | sodium/pantothenate symporter | chromosome | CDS | 3580388 | 1458 | + | 0.544582 |
pdxA | SSON_0060 | pyridoxine biosynthesis | chromosome | CDS | 61763 | 990 | - | 0.563636 |
pdxB | SSON_2378 | erythronate-4-phosphate dehyrogenase | chromosome | CDS | 2508483 | 1137 | - | 0.528584 |
pdxH | SSON_1518 | pyridoxinephosphate oxidase | chromosome | CDS | 1593907 | 657 | + | 0.517504 |
pdxJ | SSON_2688 | pyridoxine biosynthesis | chromosome | CDS | 2846063 | 732 | - | 0.553279 |
pdxK | SSON_2508 | pyridoxal/pyridoxine/pyridoxamine kinase | chromosome | CDS | 2646416 | 852 | - | 0.518779 |
pdxY | SSON_1520 | pyridoxal kinase 2/pyridoxine kinase | chromosome | CDS | 1596025 | 864 | + | 0.528935 |
pncB | SSON_0934 | nicotinate phosphoribosyltransferase | chromosome | CDS | 1006301 | 1203 | - | 0.512884 |
pnuC | SSON_0703 | required for NMN transport | chromosome | CDS | 745182 | 720 | + | 0.480556 |
poxB | SSON_0857 | pyruvate oxidase | chromosome | CDS | 908612 | 1719 | - | 0.541012 |
ribA | SSON_1863 | GTP cyclohydrolase II | chromosome | CDS | 1960376 | 591 | + | 0.497462 |
ribB | SSON_3178 | 3,4 dihydroxy-2-butanone-4-phosphate synthase | chromosome | CDS | 3337321 | 654 | - | 0.527523 |
ribD | SSON_0391 | bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis | chromosome | CDS | 418549 | 1104 | + | 0.558877 |
ribE | SSON_1494 | riboflavin synthase, alpha chain | chromosome | CDS | 1568735 | 642 | + | 0.475078 |
ribF | SSON_0030 | putative regulator | chromosome | CDS | 28573 | 942 | + | 0.531847 |
ribH | SSON_0392 | riboflavin synthase, beta chain | chromosome | CDS | 419741 | 471 | + | 0.522293 |
rimK | SSON_0837 | ribosomal protein S6 modification protein | chromosome | CDS | 888767 | 903 | + | 0.560354 |
serA | SSON_3065 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 3227372 | 1233 | - | 0.527981 |
serC | SSON_0908 | 3-phosphoserine aminotransferase | chromosome | CDS | 971922 | 1089 | + | 0.504132 |
tbpA | SSON_0074 | thiamin-binding periplasmic protein | chromosome | CDS | 82281 | 984 | - | 0.529472 |
thiC | SSON_4167 | ThiC | chromosome | CDS | 4412415 | 1896 | - | 0.557489 |
thiD | SSON_2151 | phosphomethylpyrimidine kinase | chromosome | CDS | 2255413 | 801 | - | 0.549313 |
thiE | SSON_4166 | ThiE | chromosome | CDS | 4411780 | 636 | - | 0.580189 |
thiF | SSON_4165 | ThiF | chromosome | CDS | 4411032 | 738 | - | 0.571816 |
thiG | SSON_4163 | ThiG | chromosome | CDS | 4410076 | 846 | - | 0.57565 |
thiH | SSON_4162 | ThiH | chromosome | CDS | 4408946 | 1134 | - | 0.549383 |
thiL | SSON_0394 | thiamin-monophosphate kinase | chromosome | CDS | 420728 | 978 | + | 0.543967 |
thiM | SSON_2152 | hydoxyethylthiazole kinase | chromosome | CDS | 2256210 | 789 | - | 0.547529 |
thiS | SSON_4164 | Sulfur transfer protein | chromosome | CDS | 4410848 | 201 | - | 0.552239 |
trpD | SSON_1880 | anthranilate synthase component II | chromosome | CDS | 1978146 | 1596 | + | 0.560777 |
trpE | SSON_1879 | anthranilate synthase component I | chromosome | CDS | 1976584 | 1563 | + | 0.547665 |
ubiA | SSON_4220 | 4-hydroxybenzoate-octaprenyltransferase | chromosome | CDS | 4477439 | 873 | + | 0.514318 |
ubiB | SSON_4017 | ferrisiderophore reductase | chromosome | CDS | 4243972 | 702 | + | 0.518519 |
ubiC | SSON_4219 | chorismate lyase | chromosome | CDS | 4476818 | 609 | + | 0.502463 |
ubiE | SSON_4008 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 4236299 | 756 | + | 0.519841 |
ubiG | SSON_2290 | 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase | chromosome | CDS | 2411744 | 723 | + | 0.543568 |
ubiH | SSON_3060 | 2-octaprenyl-6-methoxyphenol hydroxylase | chromosome | CDS | 3222144 | 1179 | - | 0.601357 |
ubiX | SSON_2369 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 2499825 | 570 | - | 0.529825 |
visC | SSON_3059 | hypothetical protein | chromosome | CDS | 3220919 | 1203 | - | 0.546966 |
yabJ | SSON_0072 | putative ATP-binding component of a transport system | chromosome | CDS | 80013 | 699 | - | 0.573677 |
yacE | SSON_0111 | putative DNA repair protein | chromosome | CDS | 121826 | 621 | - | 0.52818 |
ybdU | SSON_0566 | hypothetical protein | chromosome | CDS | 606487 | 552 | - | 0.586957 |
ybeN | SSON_0593 | hypothetical protein | chromosome | CDS | 631214 | 642 | - | 0.501558 |
ycdW | SSON_1042 | putative dehydrogenase | chromosome | CDS | 1125477 | 978 | + | 0.510225 |
ygcM | SSON_2918 | putative 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 3058052 | 366 | + | 0.494536 |
ygdL | SSON_2969 | putative enzyme | chromosome | CDS | 3114812 | 807 | - | 0.550186 |
ygfA | SSON_3064 | putative ligase | chromosome | CDS | 3226045 | 549 | + | 0.520947 |
yggC | SSON_3085 | putative kinase | chromosome | CDS | 3248082 | 714 | - | 0.540616 |
yggW | SSON_3109 | putative oxidase | chromosome | CDS | 3268984 | 1137 | + | 0.531223 |
ygiG | SSON_3195 | putative kinase | chromosome | CDS | 3358452 | 372 | - | 0.505376 |
yhhU | SSON_3713 | hypothetical protein | chromosome | CDS | 3890238 | 588 | + | 0.569728 |
yiaE | SSON_3835 | putative dehydrogenase | chromosome | CDS | 4027718 | 987 | - | 0.515704 |
yieE | SSON_3556 | hypothetical protein | chromosome | CDS | 3724656 | 762 | + | 0.520997 |
yigC | SSON_4016 | putative oxidoreductase | chromosome | CDS | 4242432 | 1494 | + | 0.539491 |
yleB | SSON_0616 | hypothetical protein | chromosome | CDS | 657206 | 1176 | + | 0.564626 |
yojL | SSON_2272 | hypothetical protein | chromosome | CDS | 2384673 | 1056 | - | 0.530303 |