Gene list
Applied filters:
COG category: Coenzyme transport and metabolism
Genomic element: chromosome
Number of genes found: 170
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SC1559 | putative monooxygenase | chromosome | CDS | 1652136 | 468 | - | 0.547009 |
NA | SC0767 | putative cytoplasmic protein | chromosome | CDS | 862028 | 648 | + | 0.604938 |
NA | SC2997 | hypothetical protein | chromosome | CDS | 3175308 | 1203 | - | 0.573566 |
NA | SC0970 | hypothetical protein | chromosome | CDS | 1090512 | 207 | + | 0.516908 |
NA | SC3995 | hypothetical protein | chromosome | CDS | 4249367 | 291 | - | 0.436426 |
NA | SC3905 | putative periplasmic protein | chromosome | CDS | 4157043 | 1026 | - | 0.499025 |
NA | SC3288 | putative inner membrane protein | chromosome | CDS | 3472722 | 732 | - | 0.543716 |
acpT | SC3512 | putative Phosphopantetheinyl transferase | chromosome | CDS | 3704787 | 579 | + | 0.585492 |
allP | SC0561 | Putative allantoin permease | chromosome | CDS | 626790 | 1455 | + | 0.45567 |
apbA | SC0475 | 2-dehydropantoate 2-reductase | chromosome | CDS | 531194 | 912 | - | 0.525219 |
apbE | SC2270 | putative thiamine biosynthesis lipoprotein | chromosome | CDS | 2378560 | 1053 | - | 0.566952 |
asrB | SC2543 | anaerobic sulfite reductase subunit B | chromosome | CDS | 2708097 | 819 | + | 0.555556 |
bioA | SC0791 | adenosylmethionine--8-amino-7-oxononanoate transaminase | chromosome | CDS | 887422 | 1392 | - | 0.567529 |
bioB | SC0792 | biotin synthetase | chromosome | CDS | 888798 | 1041 | + | 0.552354 |
bioD | SC1507 | dithiobiotin synthetase | chromosome | CDS | 1604605 | 696 | + | 0.521552 |
bioD | SC0795 | dithiobiotin synthetase | chromosome | CDS | 891724 | 687 | + | 0.592431 |
bioF | SC0793 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 889835 | 1158 | + | 0.605354 |
birA | SC4026 | biotin--protein ligase | chromosome | CDS | 4291714 | 963 | + | 0.49325 |
btuB | SC4019 | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 | chromosome | CDS | 4282437 | 1887 | + | 0.514043 |
btuC | SC1359 | vtamin B12-transporter permease | chromosome | CDS | 1455677 | 981 | + | 0.591233 |
btuD | SC1361 | vitamin B12-transporter ATPase | chromosome | CDS | 1457300 | 750 | + | 0.564 |
btuR | SC1715 | cob(I)yrinic acid a,c-diamide adenosyltransferase | chromosome | CDS | 1828259 | 591 | + | 0.536379 |
cbiA | SC2043 | cobyrinic acid a,c-diamide synthase | chromosome | CDS | 2134161 | 1380 | - | 0.558696 |
cbiC | SC2041 | precorrin-8X methylmutase | chromosome | CDS | 2132562 | 633 | - | 0.554502 |
cbiD | SC2040 | cobalt-precorrin-6A synthase | chromosome | CDS | 2131423 | 1140 | - | 0.554386 |
cbiE | SC2039 | precorrin-6B methylase | chromosome | CDS | 2130824 | 606 | - | 0.579208 |
cbiF | SC2037 | synthesis of vitamin B12 adenosyl cobalamide precursor | chromosome | CDS | 2129499 | 774 | - | 0.571059 |
cbiG | SC2036 | cobalamin biosynthesis protein CbiG | chromosome | CDS | 2128463 | 1056 | - | 0.552083 |
cbiH | SC2035 | precorrin-3B C17-methyltransferase | chromosome | CDS | 2127738 | 726 | - | 0.564738 |
cbiJ | SC2034 | precorrin-6x reductase | chromosome | CDS | 2126950 | 792 | - | 0.593434 |
cbiK | SC2033 | synthesis of vitamin B12 adenosyl cobalamide precursor | chromosome | CDS | 2126153 | 795 | - | 0.555975 |
cbiL | SC2032 | precorrin-2 methyltransferase | chromosome | CDS | 2125443 | 714 | - | 0.57423 |
cbiP | SC2027 | cobyric acid synthase | chromosome | CDS | 2121421 | 1521 | - | 0.558843 |
cbiT | SC2038 | precorrin-8w decarboxylase | chromosome | CDS | 2130256 | 579 | - | 0.561313 |
citG | SC0648 | putative modifier of citrate lyase protein | chromosome | CDS | 724957 | 897 | - | 0.603122 |
citG2 | SC0057 | putative modifier of citrate lyase protein | chromosome | CDS | 67185 | 909 | + | 0.545655 |
citX | SC0649 | 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyase | chromosome | CDS | 725825 | 552 | - | 0.61413 |
citX2 | SC0056 | putative cytoplasmic protein | chromosome | CDS | 66707 | 501 | + | 0.55489 |
coaA | SC4027 | pantothenate kinase | chromosome | CDS | 4292711 | 957 | - | 0.454545 |
coaE | SC0139 | dephospho-CoA kinase | chromosome | CDS | 159265 | 621 | - | 0.542673 |
cobD | SC2042 | cobalamin biosynthesis protein | chromosome | CDS | 2133205 | 960 | - | 0.590625 |
cobS | SC2025 | cobalamin synthase | chromosome | CDS | 2120139 | 744 | - | 0.56586 |
cobT | SC2024 | nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase | chromosome | CDS | 2119042 | 1101 | - | 0.587648 |
cobU | SC2026 | adenosylcobinamide kinase | chromosome | CDS | 2120879 | 546 | - | 0.551282 |
cysD | SC2867 | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 3029313 | 909 | - | 0.530253 |
cysG | SC3411 | siroheme synthase, catalyses four separate reactions that are required for the transformation of uroporphyrinogen III into siroheme | chromosome | CDS | 3581824 | 1374 | + | 0.57933 |
cysH | SC2877 | phosphoadenosine phosphosulfate reductase | chromosome | CDS | 3041837 | 735 | - | 0.556463 |
dciP | SC2408 | putative thiamine pyrophosphate enzyme | chromosome | CDS | 2536115 | 1653 | - | 0.594676 |
dfp | SC3653 | phosphopantothenoylcysteine synthase/decarboxylase | chromosome | CDS | 3865818 | 1224 | + | 0.553105 |
dxs | SC0463 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 519044 | 1863 | - | 0.553409 |
entC | SC0626 | isochorismate synthase | chromosome | CDS | 698878 | 1107 | + | 0.585366 |
fepC | SC0621 | ABC s+uperfamily (atp_bind), enterobactin transporter | chromosome | CDS | 693339 | 795 | - | 0.566038 |
fhuC | SC0769 | putative ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component | chromosome | CDS | 864134 | 777 | + | 0.56242 |
fhuC | SC0192 | ABC superfamily (atp_bind), hydroxymate-dependent iron transport | chromosome | CDS | 222053 | 828 | + | 0.589372 |
fimY | SC0589 | putative regulatory protein | chromosome | CDS | 657182 | 723 | - | 0.467497 |
folA | SC0082 | dihydrofolate reductase type I; trimethoprim resistance | chromosome | CDS | 95057 | 480 | + | 0.5375 |
folB | SC3153 | dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'-epimerase activity | chromosome | CDS | 3333561 | 363 | - | 0.504132 |
folC | SC2367 | multifunctional folylpolyglutamate synthase; dihydrofolate synthase, also has formylTHF polyglutamate synthase activity | chromosome | CDS | 2491764 | 1269 | - | 0.582348 |
folD | SC0581 | 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | chromosome | CDS | 647051 | 867 | - | 0.54902 |
folE | SC2209 | GTP cyclohydrolase I | chromosome | CDS | 2312957 | 669 | - | 0.521674 |
folK | SC0183 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, PPPK | chromosome | CDS | 209504 | 480 | - | 0.575 |
fre | SC3877 | NAD(P)H-flavin reductase | chromosome | CDS | 4119394 | 702 | + | 0.524217 |
gshA | SC2753 | glutamate--cysteine ligase | chromosome | CDS | 2921619 | 1557 | - | 0.5228 |
gshB | SC3035 | glutathione synthetase | chromosome | CDS | 3216430 | 948 | + | 0.543249 |
hemA | SC1771 | glutamyl-tRNA reductase | chromosome | CDS | 1887434 | 1257 | - | 0.566428 |
hemB | SC0413 | delta-aminolevulinic acid dehydratase | chromosome | CDS | 468222 | 975 | - | 0.553846 |
hemC | SC3839 | porphobilinogen deaminase | chromosome | CDS | 4080845 | 963 | - | 0.583593 |
hemD | SC3838 | uroporphyrinogen-III synthetase | chromosome | CDS | 4080108 | 741 | - | 0.576248 |
hemE | SC4048 | uroporphyrinogen decarboxylase | chromosome | CDS | 4317720 | 1065 | + | 0.573709 |
hemF | SC2450 | coproporphyrinogen III oxidase | chromosome | CDS | 2576966 | 900 | + | 0.572222 |
hemG | SC3883 | protoporphyrin oxidase | chromosome | CDS | 4129368 | 546 | + | 0.507326 |
hemH | SC0531 | ferrochelatase | chromosome | CDS | 591272 | 963 | + | 0.568017 |
hemL | SC0202 | glutamate-1-semialdehyde aminotransferase | chromosome | CDS | 233324 | 1281 | - | 0.587822 |
hemN | SC3903 | coproporphyrinogen III oxidase | chromosome | CDS | 4154932 | 1242 | - | 0.480676 |
hemN | SC3896 | coproporphyrinogen III oxidase | chromosome | CDS | 4145247 | 1374 | + | 0.517467 |
hemX | SC3837 | uroporphyrinogen III methylase | chromosome | CDS | 4078917 | 1170 | - | 0.55812 |
hemY | SC3836 | HemY | chromosome | CDS | 4077718 | 1200 | - | 0.578333 |
ilvB | SC3716 | acetolactate synthase large subunit | chromosome | CDS | 3935572 | 1689 | - | 0.560687 |
ilvC | SC3814 | ketol-acid reductoisomerase | chromosome | CDS | 4052506 | 1476 | + | 0.565041 |
ilvE | SC3808 | branched-chain amino acid aminotransferase | chromosome | CDS | 4046027 | 930 | + | 0.547312 |
ilvI | SC0113 | acetolactate synthase III large subunit | chromosome | CDS | 130191 | 1701 | + | 0.545561 |
ispA | SC0464 | geranyltranstransferase (farnesyldiphosphate synthase) | chromosome | CDS | 520930 | 900 | - | 0.574444 |
ispB | SC3243 | octaprenyl diphosphate synthase | chromosome | CDS | 3427913 | 1146 | + | 0.519197 |
kbl | SC3632 | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 3846218 | 1197 | - | 0.559733 |
kdtB | SC3648 | phosphopantetheine adenylyltransferase | chromosome | CDS | 3862925 | 480 | + | 0.529167 |
ldhA | SC1642 | D-lactate dehydrogenase | chromosome | CDS | 1753212 | 990 | + | 0.514141 |
lipA | SC0662 | lipoyl synthase | chromosome | CDS | 737409 | 966 | - | 0.548654 |
lipB | SC0664 | lipoyltransferase | chromosome | CDS | 739835 | 576 | - | 0.496528 |
lplA | SC4420 | lipoate-protein ligase A | chromosome | CDS | 4729681 | 1017 | - | 0.566372 |
menA | SC3979 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase, | chromosome | CDS | 4231193 | 930 | - | 0.554839 |
menB | SC2307 | naphthoate synthase | chromosome | CDS | 2428278 | 858 | - | 0.566434 |
menC | SC2306 | O-succinylbenzoate synthase | chromosome | CDS | 2427316 | 963 | - | 0.600208 |
menD | SC2309 | 2-oxoglutarate decarboxylase | chromosome | CDS | 2429905 | 1671 | - | 0.59605 |
menF | SC2310 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2431661 | 1296 | - | 0.568673 |
menG | SC3978 | ribonuclease activity regulator protein RraA | chromosome | CDS | 4230615 | 486 | - | 0.545267 |
metK | SC3030 | S-adenosylmethionine synthetase | chromosome | CDS | 3211182 | 1155 | + | 0.542857 |
moaA | SC0800 | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 899203 | 1023 | + | 0.535679 |
moaB | SC0801 | molybdopterin biosynthesis, protein B | chromosome | CDS | 900247 | 513 | + | 0.555556 |
moaC | SC0802 | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 900762 | 486 | + | 0.555556 |
moaD | SC0803 | molybdopterin biosynthesis protein | chromosome | CDS | 901240 | 246 | + | 0.585366 |
moaE | SC0804 | molybdopterin converting factor, subunit 2 | chromosome | CDS | 901487 | 453 | + | 0.607064 |
mobA | SC3887 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 4136274 | 585 | - | 0.562393 |
mobB | SC3886 | molybdopterin-guanine dinucleotide biosynthesis protein B, GTP-binding | chromosome | CDS | 4135762 | 531 | - | 0.495292 |
moeA | SC0841 | molybdopterin biosynthesis protein | chromosome | CDS | 942123 | 1236 | - | 0.579288 |
moeB | SC0840 | molybdopterin biosynthesis protein MoeB | chromosome | CDS | 941374 | 750 | - | 0.568 |
mogA | SC0008 | molybdenum cofactor biosynthesis protein | chromosome | CDS | 8729 | 591 | + | 0.56176 |
nadA | SC0755 | quinolinate synthetase | chromosome | CDS | 848878 | 1044 | + | 0.555556 |
nadB | SC2646 | L-aspartate oxidase | chromosome | CDS | 2797652 | 1623 | + | 0.556377 |
nadC | SC0144 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 164431 | 936 | - | 0.566239 |
nadD | SC0675 | nicotinic acid mononucleotide adenyltransferase | chromosome | CDS | 749393 | 642 | - | 0.545171 |
nadE | SC1331 | NAD(+) synthetase | chromosome | CDS | 1428782 | 828 | - | 0.530193 |
nadR | SC4425 | nicotinamide-nucleotide adenylyltransferase | chromosome | CDS | 4734077 | 1233 | + | 0.510949 |
nhg | SC2192 | salicylate hydroxylase | chromosome | CDS | 2294285 | 1194 | - | 0.586265 |
nin | SC0342 | Nin-like protein | chromosome | CDS | 388012 | 873 | + | 0.462772 |
pabA | SC3403 | para-aminobenzoate synthase component II | chromosome | CDS | 3574198 | 564 | - | 0.547872 |
pabB | SC1818 | para-aminobenzoate synthase component I | chromosome | CDS | 1936342 | 1365 | + | 0.554579 |
pabC | SC1148 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1263173 | 810 | + | 0.516049 |
pad | SC2851 | putative flavoprotein | chromosome | CDS | 3016801 | 594 | + | 0.577441 |
panB | SC0182 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 208592 | 792 | - | 0.565657 |
panC | SC0181 | pantoate--beta-alanine ligase | chromosome | CDS | 207612 | 855 | - | 0.549708 |
panD | SC0180 | aspartate 1-decarboxylase precursor | chromosome | CDS | 207137 | 381 | - | 0.532808 |
panE | SC2568 | 2-dehydropantoate 2-reductase | chromosome | CDS | 2738937 | 918 | - | 0.491285 |
panF | SC3320 | sodium/panthothenate symporter | chromosome | CDS | 3507000 | 1452 | + | 0.550276 |
pdxA | SC0163 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 188521 | 984 | + | 0.554878 |
pdxA | SC0086 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 97699 | 990 | - | 0.584848 |
pdxB | SC2372 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 2496765 | 1251 | - | 0.553957 |
pdxH | SC1466 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 1560389 | 657 | + | 0.550989 |
pdxJ | SC2573 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 2742904 | 732 | - | 0.579235 |
pdxK | SC2433 | pyridoxine kinase | chromosome | CDS | 2563305 | 867 | - | 0.568627 |
pdxY | SC1468 | pyridoxine kinase | chromosome | CDS | 1562506 | 861 | + | 0.547038 |
pncB | SC0962 | nicotinate phosphoribosyltransferase | chromosome | CDS | 1082109 | 1251 | - | 0.541167 |
pnuC | SC0756 | NMN family, nucleoside/purine/pyrimidine transporter | chromosome | CDS | 849946 | 720 | + | 0.5 |
poxB | SC0890 | pyruvate dehydrogenase | chromosome | CDS | 995129 | 1719 | - | 0.571262 |
ptpS | SC2880 | putative synthase | chromosome | CDS | 3046581 | 363 | + | 0.528926 |
ribA | SC1706 | GTP cyclohydrolase II protein | chromosome | CDS | 1817240 | 591 | + | 0.505922 |
ribB | SC3141 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 3319929 | 654 | - | 0.556575 |
ribD | SC0457 | pyrimidine deaminase/reductase | chromosome | CDS | 514255 | 1104 | + | 0.601449 |
ribE | SC1445 | riboflavin synthase subunit alpha | chromosome | CDS | 1541240 | 642 | + | 0.510903 |
ribF | SC0039 | hypothetical protein | chromosome | CDS | 47126 | 939 | + | 0.569755 |
ribH | SC0458 | riboflavin synthase subunit beta | chromosome | CDS | 515447 | 471 | + | 0.543524 |
rimK | SC0868 | ribosomal protein S6 modification protein | chromosome | CDS | 974308 | 903 | + | 0.563677 |
serA | SC3003 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 3181449 | 1233 | - | 0.553122 |
serC | SC0931 | phosphoserine aminotransferase | chromosome | CDS | 1045428 | 1089 | + | 0.532599 |
tbpA | SC0102 | thiamine-binding periplasmic protein | chromosome | CDS | 119700 | 984 | - | 0.550813 |
thiC | SC4045 | thiamine biosynthesis protein ThiC | chromosome | CDS | 4314066 | 1896 | - | 0.583861 |
thiD | SC2161 | phosphomethylpyrimidine kinase | chromosome | CDS | 2262779 | 801 | - | 0.598002 |
thiE | SC4044 | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 4313431 | 636 | - | 0.600629 |
thiF | SC4043 | thiamine biosynthesis protein ThiF | chromosome | CDS | 4312680 | 759 | - | 0.587615 |
thiG | SC4042 | thiazole synthase | chromosome | CDS | 4311727 | 1029 | - | 0.621963 |
thiH | SC4041 | thiamine biosynthesis protein ThiH | chromosome | CDS | 4310597 | 1134 | - | 0.579365 |
thiL | SC0460 | thiamine monophosphate kinase | chromosome | CDS | 516436 | 981 | + | 0.56473 |
thiM | SC2162 | hydroxyethylthiazole kinase | chromosome | CDS | 2263566 | 798 | - | 0.612782 |
trpD | SC1720 | anthranilate phosphoribosyltransferase | chromosome | CDS | 1833244 | 1596 | + | 0.572682 |
trpE | SC1719 | anthranilate synthase component I | chromosome | CDS | 1831682 | 1563 | + | 0.580934 |
ubiA | SC4113 | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 4389826 | 873 | + | 0.549828 |
ubiC | SC4112 | chorismate pyruvate lyase | chromosome | CDS | 4389315 | 498 | + | 0.540161 |
ubiE | SC3868 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 4111523 | 756 | + | 0.484127 |
ubiF | SC0699 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | chromosome | CDS | 778589 | 1176 | + | 0.60119 |
ubiG | SC2279 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 2394547 | 780 | + | 0.542308 |
ubiH | SC2998 | 2-octaprenyl-6-methoxyphenyl hydroxylase | chromosome | CDS | 3176633 | 1179 | - | 0.608991 |
ubiX | SC2358 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 2480992 | 570 | - | 0.550877 |
vdcC | SC2852 | putative 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase | chromosome | CDS | 3017394 | 1428 | + | 0.552521 |
yabJ | SC0100 | putative ABC-transport protein | chromosome | CDS | 117423 | 708 | - | 0.574859 |
ycdW | SC1083 | paral putative oxidoreductase | chromosome | CDS | 1205151 | 939 | + | 0.549521 |
ygdL | SC2927 | paral putative enzyme | chromosome | CDS | 3098536 | 807 | - | 0.562577 |
ygfA | SC3002 | putative ligase | chromosome | CDS | 3180471 | 597 | + | 0.569514 |
yggW | SC3044 | coproporphyrinogen III oxidase | chromosome | CDS | 3222566 | 1176 | + | 0.547619 |
yiaE | SC3578 | 2-hydroxyacid dehydrogenase | chromosome | CDS | 3784468 | 975 | + | 0.56718 |
yieE | SC3762 | putative cytoplasmic protein | chromosome | CDS | 3990997 | 756 | + | 0.527778 |
yigC | SC3876 | putative oxidoreductase | chromosome | CDS | 4117830 | 1479 | + | 0.538202 |