Gene list
Applied filters:
COG category: Coenzyme transport and metabolism
Genomic element: chromosome
Number of genes found: 144
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 2457T, 2457T | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | S1278 | putative ferric enterobactin transport ATP-binding protein | chromosome | CDS | 1237081 | 759 | - | 0.540184 |
NA | S1827 | hypothetical protein | chromosome | CDS | 1765979 | 306 | + | 0.447712 |
NA | S2703 | dihydropteroate synthase | chromosome | CDS | 2598850 | 816 | + | 0.607843 |
NA | S3225 | putative class II aminotransferase | chromosome | CDS | 3110259 | 351 | + | 0.507123 |
NA | S3226 | putative class II aminotransferase | chromosome | CDS | 3110642 | 789 | + | 0.52725 |
NA | S2577 | hypothetical protein | chromosome | CDS | 2471457 | 1695 | - | 0.464897 |
apbA | S0370 | 2-dehydropantoate 2-reductase | chromosome | CDS | 372111 | 912 | - | 0.513158 |
bioA | S0765 | adenosylmethionine--8-amino-7-oxononanoate transaminase | chromosome | CDS | 746952 | 1290 | - | 0.560465 |
bioB | S0766 | biotin synthesis, sulfur insertion? | chromosome | CDS | 748328 | 1041 | + | 0.554275 |
bioD | S1746 | dithiobiotin synthetase | chromosome | CDS | 1680782 | 696 | - | 0.520115 |
bioD | S0769 | dithiobiotin synthetase | chromosome | CDS | 751254 | 678 | + | 0.538348 |
bioF | S0767 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 749365 | 1155 | + | 0.586147 |
birA | S3689 | biotin--protein ligase | chromosome | CDS | 3579419 | 966 | - | 0.494824 |
btuB | S3696 | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 | chromosome | CDS | 3587724 | 1845 | - | 0.500271 |
btuC | S1637 | vtamin B12-transporter permease | chromosome | CDS | 1590231 | 981 | + | 0.552497 |
btuD | S1639 | vitamin B12-transporter ATPase | chromosome | CDS | 1591825 | 750 | + | 0.550667 |
btuR | S1357 | cob(I)yrinic acid a,c-diamide adenosyltransferase | chromosome | CDS | 1321918 | 591 | - | 0.510998 |
citG | S0537 | hypothetical protein | chromosome | CDS | 548368 | 879 | - | 0.550626 |
citX | S0538 | 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyase | chromosome | CDS | 549283 | 489 | - | 0.595092 |
coaA | S3688 | pantothenate kinase | chromosome | CDS | 3578464 | 927 | + | 0.445523 |
coaE | S0102 | dephospho-CoA kinase | chromosome | CDS | 110588 | 621 | - | 0.523349 |
cobS | S2170 | cobalamin synthase | chromosome | CDS | 2057157 | 744 | - | 0.533602 |
cobT | S2169 | nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase | chromosome | CDS | 2056066 | 1080 | - | 0.512037 |
cysD | S2968 | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 2842262 | 909 | - | 0.537954 |
cysG | S4376 | uroporphyrinogen III methylase | chromosome | CDS | 4304284 | 1374 | - | 0.542213 |
cysH | S2971 | phosphoadenosine phosphosulfate reductase | chromosome | CDS | 2846306 | 735 | - | 0.514286 |
dfp | S4090 | phosphopantothenoylcysteine synthase/decarboxylase | chromosome | CDS | 3990992 | 1293 | - | 0.525135 |
dinD | S4084 | DNA-damage-inducible protein | chromosome | CDS | 3986358 | 825 | - | 0.45697 |
dxs | S0365 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 366822 | 1863 | - | 0.538916 |
fepC | S0508 | ATP-binding component of ferric enterobactin transport | chromosome | CDS | 518740 | 816 | - | 0.53799 |
fhuC | S0146 | ATP-binding component of hydroxymate-dependent iron transport | chromosome | CDS | 161047 | 798 | + | 0.561404 |
folA | S0047 | dihydrofolate reductase type I | chromosome | CDS | 48627 | 480 | + | 0.529167 |
folC | S2526 | dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase | chromosome | CDS | 2419243 | 1269 | - | 0.559496 |
folD | S0468 | 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase | chromosome | CDS | 475188 | 867 | - | 0.545559 |
folE | S2367 | GTP cyclohydrolase I | chromosome | CDS | 2244919 | 669 | - | 0.509716 |
folK | S0137 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase | chromosome | CDS | 148522 | 480 | - | 0.520833 |
folP | S3435 | 7,8-dihydropteroate synthase | chromosome | CDS | 3307363 | 894 | - | 0.510067 |
folX | S2514 | D-erythro-7,8-dihydroneopterin triphosphate epimerase | chromosome | CDS | 2408894 | 363 | + | 0.449036 |
gshA | S2902 | glutamate--cysteine ligase | chromosome | CDS | 2783416 | 1557 | - | 0.511882 |
gshB | S3142 | glutathione synthetase | chromosome | CDS | 3022370 | 951 | + | 0.535226 |
hemA | S1297 | glutamyl-tRNA reductase | chromosome | CDS | 1260310 | 1257 | + | 0.538584 |
hemB | S0270 | delta-aminolevulinic acid dehydratase | chromosome | CDS | 270893 | 1008 | + | 0.537698 |
hemC | S3879 | porphobilinogen deaminase | chromosome | CDS | 3774178 | 942 | + | 0.559448 |
hemD | S3880 | uroporphyrinogen-III synthetase | chromosome | CDS | 3775116 | 741 | + | 0.530364 |
hemE | S3666 | uroporphyrinogen decarboxylase | chromosome | CDS | 3555605 | 1065 | - | 0.561502 |
hemG | S3826 | protoporphyrin oxidase | chromosome | CDS | 3725208 | 546 | - | 0.514652 |
hemH | S0427 | ferrochelatase | chromosome | CDS | 434277 | 963 | + | 0.543095 |
hemL | S0149 | glutamate-1-semialdehyde aminotransferase | chromosome | CDS | 164748 | 1281 | - | 0.557377 |
hemN | S3809 | coproporphyrinogen III oxidase | chromosome | CDS | 3707113 | 1374 | - | 0.528384 |
hemX | S3881 | uroporphyrinogen III methylase | chromosome | CDS | 3775878 | 1200 | + | 0.534167 |
hemY | S3882 | HemY protein | chromosome | CDS | 3777080 | 1197 | + | 0.543024 |
ilvB | S3978 | acetolactate synthase large subunit | chromosome | CDS | 3872959 | 1689 | - | 0.560687 |
ilvC | S3910 | ketol-acid reductoisomerase | chromosome | CDS | 3804464 | 1476 | - | 0.53523 |
ilvE | S3914 | branched-chain amino acid aminotransferase | chromosome | CDS | 3810438 | 930 | - | 0.544086 |
ilvG | S3917 | acetolactate synthase II large subunit | chromosome | CDS | 3811647 | 1647 | - | 0.545841 |
ilvI | S0074 | acetolactate synthase III large subunit | chromosome | CDS | 82873 | 1809 | + | 0.524599 |
ispA | S0366 | geranyltranstransferase (farnesyldiphosphate synthase) | chromosome | CDS | 368709 | 900 | - | 0.543333 |
ispB | S3445 | octaprenyl diphosphate synthase | chromosome | CDS | 3317009 | 972 | + | 0.526749 |
kbl | S4110 | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 4010194 | 1197 | + | 0.54386 |
kdtB | S4095 | phosphopantetheine adenylyltransferase | chromosome | CDS | 3994639 | 480 | - | 0.527083 |
ldhA | S1459 | D-lactate dehydrogenase | chromosome | CDS | 1423921 | 990 | + | 0.50202 |
lipA | S0675 | lipoyl synthase | chromosome | CDS | 686537 | 966 | + | 0.534162 |
lipB | S0673 | lipoyltransferase | chromosome | CDS | 684541 | 576 | + | 0.472222 |
menA | S3739 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase, | chromosome | CDS | 3637791 | 927 | + | 0.533981 |
menB | S2475 | naphthoate synthase | chromosome | CDS | 2368149 | 858 | - | 0.551282 |
menC | S2474 | O-succinylbenzoate synthase | chromosome | CDS | 2367187 | 963 | - | 0.5919 |
menD | S2477 | 2-oxoglutarate decarboxylase | chromosome | CDS | 2369776 | 1671 | - | 0.579294 |
menF | S2478 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2371535 | 1071 | - | 0.538749 |
menG | S3740 | ribonuclease activity regulator protein RraA | chromosome | CDS | 3638810 | 486 | + | 0.522634 |
metK | S3137 | S-adenosylmethionine synthetase | chromosome | CDS | 3017185 | 1155 | + | 0.532468 |
moaA | S0772 | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 756028 | 990 | + | 0.540404 |
moaB | S0773 | molybdopterin biosynthesis protein B | chromosome | CDS | 757039 | 513 | + | 0.524366 |
moaC | S0774 | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 757554 | 486 | + | 0.561728 |
moaD | S0775 | molybdopterin biosynthesis protein D | chromosome | CDS | 758032 | 246 | + | 0.569106 |
moaE | S0776 | molybdopterin converting factor, subunit 2 | chromosome | CDS | 758279 | 453 | + | 0.578366 |
mobA | S3819 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 3718533 | 585 | + | 0.509402 |
mobB | S3820 | molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 3719099 | 528 | + | 0.484848 |
modD | S1276 | molybdenum transport protein | chromosome | CDS | 1235408 | 855 | - | 0.523977 |
moeA | S0820 | molybdopterin biosynthesis MoeA protein | chromosome | CDS | 805450 | 1236 | - | 0.563107 |
moeB | S0819 | molybdopterin biosynthesis protein MoeB | chromosome | CDS | 804701 | 750 | - | 0.558667 |
mogA | S0009 | molybdenum cofactor biosynthesis protein | chromosome | CDS | 9305 | 588 | + | 0.540816 |
nadA | S0562 | quinolinate synthetase | chromosome | CDS | 570938 | 1044 | - | 0.501916 |
nadC | S0108 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 115503 | 894 | - | 0.533557 |
nadD | S0664 | nicotinic acid mononucleotide adenyltransferase | chromosome | CDS | 676180 | 642 | + | 0.498442 |
nadE | S1603 | NAD(+) synthetase | chromosome | CDS | 1560542 | 828 | - | 0.487923 |
nadR | S4693 | nicotinamide-nucleotide adenylyltransferase | chromosome | CDS | 4585051 | 1254 | + | 0.513557 |
pabA | S4384 | para-aminobenzoate synthase component II | chromosome | CDS | 4312665 | 564 | + | 0.537234 |
pabB | S1531 | para-aminobenzoate synthase component I | chromosome | CDS | 1491052 | 1362 | - | 0.507342 |
pabC | S1180 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1143908 | 810 | + | 0.506173 |
padI | S2955 | phenylacrylic acid decarboxylase-like protein | chromosome | CDS | 2832134 | 594 | - | 0.570707 |
panB | S0133 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 146389 | 795 | - | 0.538365 |
panC | S0132 | pantoate--beta-alanine ligase | chromosome | CDS | 145526 | 852 | - | 0.5223 |
panD | S0130 | aspartate 1-decarboxylase precursor | chromosome | CDS | 143896 | 381 | - | 0.527559 |
panF | S3513 | sodium/panthothenate symporter | chromosome | CDS | 3385261 | 1452 | + | 0.541322 |
pdxA | S0051 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 51231 | 990 | - | 0.562626 |
pdxB | S2531 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 2424284 | 1137 | - | 0.5365 |
pdxH | S1795 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 1733707 | 657 | - | 0.515982 |
pdxJ | S2799 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 2691657 | 732 | - | 0.553279 |
pdxK | S2619 | pyridoxine kinase | chromosome | CDS | 2511819 | 852 | - | 0.518779 |
pdxY | S1793 | pyridoxine kinase | chromosome | CDS | 1731382 | 864 | - | 0.52662 |
pncB | S0992 | nicotinate phosphoribosyltransferase | chromosome | CDS | 978345 | 1203 | - | 0.512884 |
pnuC | S0561 | PnuC protein | chromosome | CDS | 570181 | 720 | - | 0.483333 |
poxB | S0867 | pyruvate dehydrogenase | chromosome | CDS | 853384 | 1719 | - | 0.536358 |
ribA | S1364 | GTP cyclohydrolase II protein | chromosome | CDS | 1332721 | 591 | - | 0.499154 |
ribB | S3286 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 3165611 | 654 | - | 0.527523 |
ribD | S0359 | bifunctional pyrimidine deaminase/reductase | chromosome | CDS | 362087 | 1104 | + | 0.557065 |
ribE | S1822 | riboflavin synthase subunit alpha | chromosome | CDS | 1761880 | 642 | - | 0.478193 |
ribF | S0024 | hypothetical protein | chromosome | CDS | 20361 | 942 | + | 0.529724 |
ribH | S0360 | riboflavin synthase subunit beta | chromosome | CDS | 363279 | 471 | + | 0.522293 |
rimK | S0848 | ribosomal protein S6 modification protein | chromosome | CDS | 833540 | 903 | + | 0.555925 |
serA | S3098 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 2983573 | 1233 | - | 0.52717 |
serC | S0966 | phosphoserine aminotransferase | chromosome | CDS | 943974 | 1089 | + | 0.504132 |
tbpA | S0065 | thiamin-binding periplasmic protein | chromosome | CDS | 71825 | 984 | - | 0.527439 |
thiC | S3669 | thiamine biosynthesis protein ThiC | chromosome | CDS | 3558287 | 1896 | + | 0.55538 |
thiD | S2290 | phosphomethylpyrimidine kinase | chromosome | CDS | 2170763 | 801 | - | 0.55181 |
thiE | S3670 | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 3560182 | 636 | + | 0.578616 |
thiF | S3671 | thiamine biosynthesis protein ThiF | chromosome | CDS | 3560810 | 756 | + | 0.56746 |
thiG | S3672 | thiazole synthase | chromosome | CDS | 3561676 | 846 | + | 0.58156 |
thiH | S3673 | thiamine biosynthesis protein ThiH | chromosome | CDS | 3562518 | 1134 | + | 0.547619 |
thiL | S0362 | thiamine monophosphate kinase | chromosome | CDS | 364266 | 978 | + | 0.543967 |
thiM | S2291 | hydroxyethylthiazole kinase | chromosome | CDS | 2171560 | 789 | - | 0.541191 |
trpD | S1352 | anthranilate phosphoribosyltransferase | chromosome | CDS | 1315976 | 1596 | - | 0.561404 |
trpE | S1353 | anthranilate synthase component I | chromosome | CDS | 1317571 | 1563 | - | 0.539987 |
ubiA | S3566 | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 3434864 | 873 | + | 0.510882 |
ubiB | S3832 | NAD(P)H-flavin reductase | chromosome | CDS | 3732944 | 702 | - | 0.527066 |
ubiC | S3565 | chorismate lyase | chromosome | CDS | 3434354 | 498 | + | 0.52008 |
ubiE | S3843 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 3740562 | 756 | - | 0.519841 |
ubiG | S2445 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 2334464 | 723 | + | 0.543568 |
ubiH | S3092 | 2-octaprenyl-6-methoxyphenyl hydroxylase | chromosome | CDS | 2978343 | 1179 | - | 0.597116 |
ubiX | S2522 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 2415626 | 570 | - | 0.531579 |
visC | S3091 | hypothetical protein | chromosome | CDS | 2977118 | 1203 | - | 0.551122 |
yabJ | S0063 | putative ATP-binding component of a transport system | chromosome | CDS | 69557 | 699 | - | 0.569385 |
yclC | S2954 | putative 4-hydroxybenzoate decarboxylase | chromosome | CDS | 2831184 | 951 | - | 0.56572 |
ygcM | S2974 | putative 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 2850944 | 363 | + | 0.490358 |
ygdL | S3021 | putative enzyme | chromosome | CDS | 2900162 | 807 | - | 0.551425 |
ygfA | S3097 | putative ligase | chromosome | CDS | 2982244 | 549 | + | 0.520947 |
yggW | S3150 | coproporphyrinogen III oxidase | chromosome | CDS | 3027751 | 1137 | + | 0.523307 |
ygiG | S3304 | putative kinase | chromosome | CDS | 3181991 | 369 | - | 0.506775 |
yhhU | S4270 | hypothetical protein | chromosome | CDS | 4189923 | 588 | - | 0.566327 |
yiaE | S4182 | 2-hydroxyacid dehydrogenase | chromosome | CDS | 4085869 | 975 | - | 0.52 |
yieE | S4024 | hypothetical protein | chromosome | CDS | 3917759 | 750 | + | 0.521333 |
yigC | S3833 | putative oxidoreductase | chromosome | CDS | 3733691 | 1494 | - | 0.536145 |
yleB | S0642 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | chromosome | CDS | 651676 | 1176 | - | 0.560374 |
yojL | S2428 | hypothetical protein | chromosome | CDS | 2311322 | 1056 | - | 0.534091 |