Gene list
Applied filters:
COG category: Coenzyme transport and metabolism
Genomic element: chromosome
Number of genes found: 144
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 301, 301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SF3025 | putative class II aminotransferase | chromosome | CDS | 3121979 | 789 | + | 0.52725 |
NA | SF2440 | hypothetical protein | chromosome | CDS | 2493319 | 1695 | - | 0.464897 |
NA | SF2918 | hypothetical protein | chromosome | CDS | 3011204 | 714 | - | 0.544818 |
NA | SF3024 | putative class II aminotransferase | chromosome | CDS | 3121596 | 351 | + | 0.507123 |
NA | SF1695 | hypothetical protein | chromosome | CDS | 1727683 | 306 | + | 0.447712 |
NA | SF1192 | putative ferric enterobactin transport ATP-binding protein | chromosome | CDS | 1236027 | 759 | - | 0.540184 |
apbA | SF0362 | 2-dehydropantoate 2-reductase | chromosome | CDS | 372977 | 912 | - | 0.513158 |
bioA | SF0725 | adenosylmethionine--8-amino-7-oxononanoate transaminase | chromosome | CDS | 750795 | 1401 | - | 0.549607 |
bioB | SF0724 | biotin synthesis, sulfur insertion? | chromosome | CDS | 752171 | 1041 | + | 0.554275 |
bioD | SF0728 | dithiobiotin synthetase | chromosome | CDS | 755097 | 678 | + | 0.538348 |
bioD | SF1614 | dithiobiotin synthetase | chromosome | CDS | 1641153 | 696 | - | 0.520115 |
bioF | SF0726 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 753208 | 1155 | + | 0.586147 |
birA | SF4051 | biotin--protein ligase | chromosome | CDS | 4192835 | 966 | + | 0.494824 |
btuB | SF4048 | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 | chromosome | CDS | 4183651 | 1845 | + | 0.500271 |
btuC | SF1520 | vtamin B12-transporter permease | chromosome | CDS | 1551855 | 981 | + | 0.552497 |
btuD | SF1522 | vitamin B12-transporter ATPase | chromosome | CDS | 1553449 | 750 | + | 0.550667 |
btuR | SF1272 | cob(I)yrinic acid a,c-diamide adenosyltransferase | chromosome | CDS | 1322051 | 591 | - | 0.510998 |
coaA | SF4052 | pantothenate kinase | chromosome | CDS | 4193829 | 927 | - | 0.445523 |
coaE | SF0100 | dephospho-CoA kinase | chromosome | CDS | 111101 | 621 | - | 0.523349 |
cobS | SF2060 | cobalamin synthase | chromosome | CDS | 2081820 | 744 | - | 0.533602 |
cobT | SF2059 | nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase | chromosome | CDS | 2080729 | 1080 | - | 0.512037 |
cobU | SF2061 | adenosylcobinamide kinase | chromosome | CDS | 2082560 | 510 | - | 0.492157 |
cysD | SF2775 | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 2847558 | 909 | - | 0.537954 |
cysG | SF3387 | uroporphyrinogen III methylase | chromosome | CDS | 3467047 | 1374 | + | 0.542213 |
cysH | SF2778 | phosphoadenosine phosphosulfate reductase | chromosome | CDS | 2851602 | 735 | - | 0.514286 |
dfp | SF3678 | phosphopantothenoylcysteine synthase/decarboxylase | chromosome | CDS | 3782973 | 1293 | + | 0.525909 |
dinD | SF3684 | DNA-damage-inducible protein | chromosome | CDS | 3788075 | 825 | + | 0.45697 |
dxs | SF0357 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 367687 | 1863 | - | 0.539452 |
fepC | SF0502 | ATP-binding component of ferric enterobactin transport | chromosome | CDS | 522848 | 816 | - | 0.53799 |
fhuC | SF0143 | ATP-binding component of hydroxymate-dependent iron transport | chromosome | CDS | 161556 | 798 | + | 0.561404 |
folA | SF0045 | dihydrofolate reductase type I | chromosome | CDS | 49141 | 480 | + | 0.529167 |
folC | SF2391 | dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase | chromosome | CDS | 2439786 | 1269 | - | 0.559496 |
folD | SF0460 | 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase | chromosome | CDS | 475386 | 867 | - | 0.545559 |
folE | SF2238 | GTP cyclohydrolase I | chromosome | CDS | 2265463 | 669 | - | 0.509716 |
folK | SF0134 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase | chromosome | CDS | 149031 | 480 | - | 0.520833 |
folP | SF3217 | 7,8-dihydropteroate synthase | chromosome | CDS | 3316246 | 894 | - | 0.510067 |
folX | SF2379 | D-erythro-7,8-dihydroneopterin triphosphate epimerase | chromosome | CDS | 2429438 | 363 | + | 0.449036 |
gshA | SF2715 | glutamate--cysteine ligase | chromosome | CDS | 2788781 | 1341 | - | 0.51305 |
gshB | SF2938 | glutathione synthetase | chromosome | CDS | 3030181 | 951 | + | 0.535226 |
hemA | SF1213 | glutamyl-tRNA reductase | chromosome | CDS | 1260595 | 1257 | + | 0.538584 |
hemB | SF0249 | delta-aminolevulinic acid dehydratase | chromosome | CDS | 268341 | 1008 | + | 0.537698 |
hemC | SF3877 | porphobilinogen deaminase | chromosome | CDS | 3998192 | 942 | - | 0.559448 |
hemD | SF3876 | uroporphyrinogen-III synthetase | chromosome | CDS | 3997455 | 741 | - | 0.530364 |
hemE | SF4069 | uroporphyrinogen decarboxylase | chromosome | CDS | 4216551 | 1065 | + | 0.561502 |
hemF | SF2489 | coproporphyrinogen III oxidase | chromosome | CDS | 2549161 | 900 | + | 0.551111 |
hemG | SF3926 | protoporphyrin oxidase | chromosome | CDS | 4047559 | 546 | + | 0.514652 |
hemH | SF0420 | ferrochelatase | chromosome | CDS | 434476 | 963 | + | 0.543095 |
hemL | SF0146 | glutamate-1-semialdehyde aminotransferase | chromosome | CDS | 165257 | 1281 | - | 0.557377 |
hemN | SF3937 | coproporphyrinogen III oxidase | chromosome | CDS | 4064734 | 1374 | + | 0.528384 |
hemX | SF3875 | uroporphyrinogen III methylase | chromosome | CDS | 3996216 | 1218 | - | 0.536125 |
hemY | SF3874 | HemY protein | chromosome | CDS | 3995017 | 1197 | - | 0.543024 |
ilvB | SF3790 | acetolactate synthase large subunit | chromosome | CDS | 3898737 | 1599 | + | 0.564728 |
ilvC | SF3848 | ketol-acid reductoisomerase | chromosome | CDS | 3967355 | 1476 | + | 0.53523 |
ilvE | SF3845 | branched-chain amino acid aminotransferase | chromosome | CDS | 3961927 | 930 | + | 0.544086 |
ilvG | SF3843 | acetolactate synthase II large subunit | chromosome | CDS | 3960001 | 1647 | + | 0.545841 |
ilvI | SF0072 | acetolactate synthase III large subunit | chromosome | CDS | 83387 | 1809 | + | 0.524599 |
ispA | SF0358 | geranyltranstransferase (farnesyldiphosphate synthase) | chromosome | CDS | 369574 | 900 | - | 0.543333 |
ispB | SF3227 | octaprenyl diphosphate synthase | chromosome | CDS | 3325892 | 972 | + | 0.526749 |
kbl | SF3657 | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 3763827 | 1197 | - | 0.54386 |
kdtB | SF3673 | phosphopantetheine adenylyltransferase | chromosome | CDS | 3780139 | 480 | + | 0.527083 |
ldhA | SF1814 | D-lactate dehydrogenase | chromosome | CDS | 1851238 | 990 | - | 0.50202 |
lipA | SF0653 | lipoyl synthase | chromosome | CDS | 690305 | 966 | + | 0.534162 |
lipB | SF0651 | lipoyltransferase | chromosome | CDS | 688309 | 576 | + | 0.472222 |
menA | SF4008 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase, | chromosome | CDS | 4134501 | 927 | - | 0.533981 |
menB | SF2341 | naphthoate synthase | chromosome | CDS | 2388692 | 858 | - | 0.551282 |
menC | SF2340 | O-succinylbenzoate synthase | chromosome | CDS | 2387730 | 963 | - | 0.5919 |
menD | SF2343 | 2-oxoglutarate decarboxylase | chromosome | CDS | 2390319 | 1671 | - | 0.579294 |
menF | SF2344 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2392078 | 1071 | - | 0.538749 |
menG | SF4007 | ribonuclease activity regulator protein RraA | chromosome | CDS | 4133923 | 486 | - | 0.522634 |
metK | SF2933 | S-adenosylmethionine synthetase | chromosome | CDS | 3024996 | 1155 | + | 0.532468 |
moaA | SF0731 | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 759871 | 990 | + | 0.540404 |
moaB | SF0732 | molybdopterin biosynthesis protein B | chromosome | CDS | 760882 | 513 | + | 0.524366 |
moaC | SF0733 | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 761397 | 486 | + | 0.561728 |
moaD | SF0734 | molybdopterin biosynthesis protein D | chromosome | CDS | 761875 | 246 | + | 0.569106 |
moaE | SF0735 | molybdopterin converting factor, subunit 2 | chromosome | CDS | 762122 | 453 | + | 0.578366 |
mobA | SF3928 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 4054103 | 585 | - | 0.509402 |
mobB | SF3927 | molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 4053594 | 528 | - | 0.484848 |
modD | SF1190 | molybdenum transport protein | chromosome | CDS | 1234354 | 855 | - | 0.523977 |
moeA | SF0777 | molybdopterin biosynthesis MoeA protein | chromosome | CDS | 809292 | 1236 | - | 0.563107 |
moeB | SF0776 | molybdopterin biosynthesis protein MoeB | chromosome | CDS | 808543 | 750 | - | 0.558667 |
mogA | SF0010 | molybdenum cofactor biosynthesis protein | chromosome | CDS | 9305 | 588 | + | 0.540816 |
nadA | SF0554 | quinolinate synthetase | chromosome | CDS | 575045 | 1044 | - | 0.501916 |
nadC | SF0106 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 116016 | 894 | - | 0.533557 |
nadD | SF0642 | nicotinic acid mononucleotide adenyltransferase | chromosome | CDS | 679948 | 642 | + | 0.498442 |
nadE | SF1486 | NAD(+) synthetase | chromosome | CDS | 1522166 | 828 | - | 0.487923 |
nadR | SF4422 | nicotinamide-nucleotide adenylyltransferase | chromosome | CDS | 4592900 | 1254 | + | 0.512759 |
pabA | SF3379 | para-aminobenzoate synthase component II | chromosome | CDS | 3459476 | 564 | - | 0.537234 |
pabB | SF1416 | para-aminobenzoate synthase component I | chromosome | CDS | 1454127 | 1362 | - | 0.507342 |
pabC | SF1100 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1141015 | 810 | + | 0.506173 |
padI | SF2762 | phenylacrylic acid decarboxylase-like protein | chromosome | CDS | 2837429 | 594 | - | 0.570707 |
panB | SF0131 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 146898 | 795 | - | 0.538365 |
panC | SF0130 | pantoate--beta-alanine ligase | chromosome | CDS | 146035 | 852 | - | 0.5223 |
panD | SF0128 | aspartate 1-decarboxylase precursor | chromosome | CDS | 144405 | 381 | - | 0.527559 |
panF | SF3296 | sodium/panthothenate symporter | chromosome | CDS | 3395179 | 1452 | + | 0.541322 |
pdxA | SF0049 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 51745 | 990 | - | 0.562626 |
pdxB | SF2396 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 2444827 | 1137 | - | 0.53562 |
pdxH | SF1663 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 1694117 | 657 | - | 0.515982 |
pdxJ | SF2626 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 2698213 | 732 | - | 0.553279 |
pdxK | SF2473 | pyridoxine kinase | chromosome | CDS | 2533686 | 852 | - | 0.516432 |
pdxY | SF1661 | pyridoxine kinase | chromosome | CDS | 1691744 | 864 | - | 0.52662 |
pncB | SF0928 | nicotinate phosphoribosyltransferase | chromosome | CDS | 974376 | 1203 | - | 0.512053 |
pnuC | SF0553 | PnuC protein | chromosome | CDS | 574288 | 720 | - | 0.483333 |
poxB | SF0826 | pyruvate dehydrogenase | chromosome | CDS | 858567 | 1719 | - | 0.536358 |
ribA | SF1281 | GTP cyclohydrolase II protein | chromosome | CDS | 1332854 | 591 | - | 0.499154 |
ribB | SF3081 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 3176948 | 654 | - | 0.527523 |
ribD | SF0351 | bifunctional pyrimidine deaminase/reductase | chromosome | CDS | 362952 | 1104 | + | 0.557065 |
ribE | SF1690 | riboflavin synthase subunit alpha | chromosome | CDS | 1722328 | 642 | - | 0.478193 |
ribF | SF0021 | hypothetical protein | chromosome | CDS | 20362 | 942 | + | 0.529724 |
ribH | SF0352 | riboflavin synthase subunit beta | chromosome | CDS | 364144 | 471 | + | 0.522293 |
rimK | SF0806 | ribosomal protein S6 modification protein | chromosome | CDS | 838722 | 903 | + | 0.554817 |
serA | SF2898 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 2991484 | 1233 | - | 0.52717 |
serC | SF0902 | phosphoserine aminotransferase | chromosome | CDS | 940005 | 1089 | + | 0.503214 |
tbpA | SF0063 | thiamin-binding periplasmic protein | chromosome | CDS | 72339 | 984 | - | 0.527439 |
thiC | SF4066 | thiamine biosynthesis protein ThiC | chromosome | CDS | 4213038 | 1896 | - | 0.55538 |
thiD | SF2165 | phosphomethylpyrimidine kinase | chromosome | CDS | 2189239 | 801 | - | 0.55181 |
thiE | SF4065 | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 4212403 | 636 | - | 0.578616 |
thiF | SF4064 | thiamine biosynthesis protein ThiF | chromosome | CDS | 4211655 | 756 | - | 0.56746 |
thiG | SF4063 | thiazole synthase | chromosome | CDS | 4210699 | 846 | - | 0.58156 |
thiH | SF4062 | thiamine biosynthesis protein ThiH | chromosome | CDS | 4209569 | 1134 | - | 0.547619 |
thiL | SF0354 | thiamine monophosphate kinase | chromosome | CDS | 365131 | 978 | + | 0.543967 |
thiM | SF2166 | hydroxyethylthiazole kinase | chromosome | CDS | 2190036 | 789 | - | 0.541191 |
trpD | SF1266 | anthranilate phosphoribosyltransferase | chromosome | CDS | 1316110 | 1596 | - | 0.561404 |
trpE | SF1267 | anthranilate synthase component I | chromosome | CDS | 1317705 | 1563 | - | 0.539987 |
ubiA | SF4165 | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 4335894 | 873 | - | 0.510882 |
ubiB | SF3920 | NAD(P)H-flavin reductase | chromosome | CDS | 4039667 | 702 | + | 0.527066 |
ubiC | SF4166 | chorismate lyase | chromosome | CDS | 4336779 | 498 | - | 0.52008 |
ubiE | SF3911 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 4031995 | 756 | + | 0.519841 |
ubiG | SF2312 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 2355007 | 723 | + | 0.543568 |
ubiH | SF2893 | 2-octaprenyl-6-methoxyphenyl hydroxylase | chromosome | CDS | 2986254 | 1179 | - | 0.597116 |
ubiX | SF2387 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 2436169 | 570 | - | 0.531579 |
visC | SF2892 | hypothetical protein | chromosome | CDS | 2985029 | 1203 | - | 0.551953 |
yabJ | SF0061 | putative ATP-binding component of a transport system | chromosome | CDS | 70071 | 699 | - | 0.572246 |
yclC | SF2761 | putative 4-hydroxybenzoate decarboxylase | chromosome | CDS | 2836479 | 951 | - | 0.564669 |
ygcM | SF2781 | putative 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 2856240 | 363 | + | 0.490358 |
ygdL | SF2826 | putative enzyme | chromosome | CDS | 2905471 | 807 | - | 0.551425 |
ygfA | SF2897 | putative ligase | chromosome | CDS | 2990155 | 549 | + | 0.520947 |
yggW | SF2946 | coproporphyrinogen III oxidase | chromosome | CDS | 3035562 | 1137 | + | 0.523307 |
ygiG | SF3099 | putative kinase | chromosome | CDS | 3193329 | 369 | - | 0.506775 |
yhhU | SF3493 | hypothetical protein | chromosome | CDS | 3583493 | 588 | + | 0.566327 |
yiaE | SF3587 | 2-hydroxyacid dehydrogenase | chromosome | CDS | 3688375 | 975 | + | 0.52 |
yieE | SF3748 | hypothetical protein | chromosome | CDS | 3856086 | 750 | - | 0.521333 |
yigC | SF3919 | putative oxidoreductase | chromosome | CDS | 4038128 | 1494 | + | 0.535475 |
yleB | SF0620 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | chromosome | CDS | 655443 | 1176 | - | 0.560374 |
yojL | SF2298 | hypothetical protein | chromosome | CDS | 2331865 | 1056 | - | 0.534091 |