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2024-06-25 09:04:28

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 91

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Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Z0667 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS632246 465 + 0.490323
NA Z1292 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1222086 564 + 0.475177
NA Z1608 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1493737 1143 - 0.544182
NA Z4218 proteoglycanSubName: Full=Putative proteoglycan; chromosome CDS3824554 1395 + 0.526882
NA Z0665 hypothetical proteinSubName: Full=Putative transport protein; SubName: Full=Uncharacterized protein; chromosome CDS629921 1392 + 0.476293
NA Z1169 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1098130 1143 - 0.544182
NA Z4212 dihydropyrimidinaseRecName: Full=D-phenylhydantoinase; EC=3.5.2.-; AltName: Full=Hydantoin-utilizing enzyme HyuA; chromosome CDS3815653 1398 + 0.530758
NA Z0244 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS241872 297 - 0.282828
NA Z0666 allantoinaseSubName: Full=Allantoinase; SubName: Full=Uncharacterized protein; chromosome CDS631349 891 + 0.534231
add Z2628 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS2377149 1002 + 0.532934
adk Z0591 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS563073 645 + 0.52093
amn Z3139 AMP nucleosidaseRecName: Full=AMP nucleosidase; EC=3.2.2.4; chromosome CDS2800899 1455 + 0.498969
apt Z0586 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS557310 552 + 0.538043
carA Z0037 carbamoyl-phosphate synthase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS34026 1149 + 0.534378
carB Z0038 carbamoyl-phosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS35192 3222 + 0.558659
cdd Z3398 cytidine deaminase chromosome CDS3038104 885 + 0.545763
cmk Z1256 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1180067 684 + 0.53655
codA Z0433 cytosine deaminaseSubName: Full=Cytosine deaminase; chromosome CDS413152 1284 + 0.534268
codB Z0432 cytosine permease/transportRecName: Full=Cytosine permease; chromosome CDS411903 1260 + 0.54127
cpdB Z5824 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor proteinSubName: Full=2:3-cyclic-nucleotide 2-phosphodiesterase; chromosome CDS5320071 1944 - 0.497428
cyaA Z5322 adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; AltName: Full=ATP pyrophosphate-lyase; AltName: Full=Adenylyl cyclase; chromosome CDS4853574 2547 + 0.519435
dcd Z3233 deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS2887696 582 - 0.599656
deoA Z5984 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS5506065 1323 + 0.5548
deoC Z5983 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS5505159 780 + 0.547436
deoD Z5986 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS5508719 720 + 0.525
dgt Z0171 deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; Short=dGTP triphosphohydrolase; Short=dGTPase; EC=3.1.5.1; chromosome CDS183437 1518 + 0.477602
dut Z5064 deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS4626774 456 + 0.548246
gmk Z5074 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS4634273 624 + 0.488782
gppA Z5289 guanosine pentaphosphatase; exopolyphosphataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome CDS4825136 1485 - 0.5367
gpt Z0299 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS293865 459 + 0.51634
guaA Z3771 bifunctional GMP synthase/glutamine amidotransferase proteinRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS3416936 1578 - 0.538657
guaC Z0114 guanosine 5'-monophosphate oxidoreductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS117934 1044 + 0.509579
hpt Z0136 hypoxanthine-guanine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome CDS145792 549 + 0.499089
iadA Z5927 isoaspartyl dipeptidaseRecName: Full=Isoaspartyl dipeptidase; EC=3.4.19.-; chromosome CDS5443180 1173 - 0.560102
ndk Z3781 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS3430410 432 - 0.527778
nrdA Z3489 ribonucleotide-diphosphate reductase alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3141917 2286 + 0.539807
nrdB Z3491 ribonucleotide-diphosphate reductase beta subunitRecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; EC=1.17.4.1; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1; chromosome CDS3144429 1131 + 0.510168
nrdD Z5848 anaerobic ribonucleoside triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; chromosome CDS5346046 2139 - 0.535297
nrdE Z3977 ribonucleotide-diphosphate reductase alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3592788 2145 + 0.52028
nrdF Z3978 ribonucleotide-diphosphate reductase beta subunitRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS3594942 960 + 0.485417
nrdI Z3976 hypothetical proteinRecName: Full=Protein NrdI; chromosome CDS3592405 411 + 0.562044
nupC Z3659 permease of transport system for 3 nucleosidesSubName: Full=Permease of transport system for 3 nucleosides; chromosome CDS3311135 1203 + 0.492934
pfs Z0170 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS182655 699 - 0.527897
ppx Z3765 exopolyphosphataseRecName: Full=Exopolyphosphatase; Short=ExopolyPase; EC=3.6.1.11; AltName: Full=Metaphosphatase; chromosome CDS3411093 1542 + 0.511025
prsA Z1978 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS1798216 948 - 0.522152
purA Z5784 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS5288398 1299 + 0.537336
purB Z1860 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome CDS1696314 1371 - 0.525164
purC Z3735 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS3382834 714 - 0.52381
purD Z5582 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS5082192 1290 - 0.58062
purE Z0678 phosphoribosylaminoimidazole carboxylase catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide mutase; chromosome CDS644737 510 - 0.57451
purF Z3574 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS3224847 1518 - 0.528327
purH Z5583 bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS5083493 1590 - 0.55912
purK Z0677 phosphoribosylaminoimidazole carboxylaseSubName: Full=Phosphoribosylaminoimidazole carboxylase; SubName: Full=Phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; chromosome CDS643673 1068 - 0.570225
purL Z3835 phosphoribosylformylglycinamidine synthase chromosome CDS3481878 3888 - 0.568673
purM Z3762 phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS3407176 1038 + 0.528902
purN Z3763 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase 1; chromosome CDS3408213 639 + 0.538341
purT Z2901 5'-phosphoribosylglycinamide transformylaseRecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS2607920 1179 + 0.540288
purU Z2008 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase for purT-dependent FGAR synthesis; chromosome CDS1824763 843 - 0.478055
pyrB Z5856 aspartate carbamoyltransferase catalytic subunitRecName: Full=Aspartate carbamoyltransferase catalytic chain; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS5356983 936 - 0.534188
pyrC Z1699 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1565791 1047 - 0.531041
pyrD Z1294 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1223462 1011 + 0.463897
pyrE Z5066 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS4627969 642 - 0.531153
pyrF Z2525 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2243811 738 - 0.533875
pyrG Z4095 CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS3697726 1638 - 0.519536
pyrH Z0182 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS195342 726 + 0.528926
pyrI Z5855 aspartate carbamoyltransferase regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS5356509 462 - 0.491342
tdk Z2015 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS1830507 618 + 0.423948
thyA Z4144 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS3754059 795 - 0.506918
tmk Z1737 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1599305 642 + 0.537383
udk Z3234 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS2888369 696 - 0.488506
udp Z5353 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome CDS4881504 762 + 0.53937
upp Z3761 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS3406225 654 - 0.53211
uraA Z3760 uracil transportRecName: Full=Uracil permease; AltName: Full=Uracil transporter; chromosome CDS3404850 1290 - 0.524806
ushA Z0599 UDP-sugar hydrolase (5'-nucleotidase)SubName: Full=UDP-sugar hydrolase; SubName: Full=UDP-sugar hydrolase (5-nucleotidase); chromosome CDS570707 1653 + 0.508167
yaaF Z0035 hypothetical proteinRecName: Full=Non-specific ribonucleoside hydrolase RihC; EC=3.2.-.-; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase; chromosome CDS31668 915 + 0.556284
yahJ Z0413 cytosine deaminaseSubName: Full=Putative deaminase; chromosome CDS392717 1383 + 0.562545
ybbT Z0659 ureidoglycolate hydrolaseRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS624738 483 + 0.507246
ybbY Z0668 putative transportSubName: Full=Putative transport; SubName: Full=Putative uracil transport protein; chromosome CDS632761 1308 + 0.512997
ybeK Z0801 putative tRNA synthetaseRecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA; EC=3.2.-.-; AltName: Full=Cytidine/uridine-specific hydrolase; chromosome CDS764618 936 - 0.508547
ycdG Z1505 putative transport proteinSubName: Full=Putative transport protein; chromosome CDS1393103 1395 - 0.536918
ycfF Z1742 hypothetical proteinRecName: Full=HIT-like protein HinT; EC=3.-.-.-; AltName: Full=Purine nucleoside phosphoramidase; chromosome CDS1606087 360 + 0.508333
yeiJ Z3418 putative transport system permease proteinSubName: Full=Putative transport system permease protein; chromosome CDS3059091 1242 - 0.508052
yeiK Z3419 hypothetical proteinRecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihB; EC=3.2.2.8; AltName: Full=Cytidine/uridine-specific hydrolase; chromosome CDS3060441 942 - 0.518047
yeiM Z3421 putative transport system permease proteinSubName: Full=Putative transport system permease protein; chromosome CDS3062281 1251 - 0.510791
yfhC Z3839 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS3487575 537 - 0.528864
ygfO Z4221 putative transport proteinRecName: Full=Xanthine permease XanQ; chromosome CDS3829752 1458 + 0.481481
ygfP Z4222 guanine deaminaseSubName: Full=Uncharacterized protein; chromosome CDS3831224 1320 + 0.487879
ygfU Z4226 putative permeaseSubName: Full=Putative permease; chromosome CDS3836756 1518 + 0.486825
yggV Z4299 putative deoxyribonucleotide triphosphate pyrophosphataseRecName: Full=dITP/XTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS3905499 594 + 0.558923
yicE Z5082 putative transport proteinRecName: Full=Xanthine permease XanP; chromosome CDS4642475 1392 + 0.550287
yicP Z5155 probable adenine deaminase (synthesis xanthine)RecName: Full=Adenine deaminase; Short=Adenase; Short=Adenine aminase; EC=3.5.4.2; chromosome CDS4700079 1767 + 0.546123