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2024-06-08 20:51:03

Gene list

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COG category: Unclassified
Genomic element: pCD

Number of genes found: 41

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_CD0044 conjugative transfer surface exclusion proteinpCD CDS36803 618 + 0.487055
NA YPA_CD0089 hypothetical proteinpCD CDS66165 93 + 0.387097
NA YPA_CD0069 replication initiation proteinpCD CDS58943 867 + 0.542099
NA YPA_CD0009 type III secretion proteinpCD CDS6117 348 - 0.439655
NA YPA_CD0025 type III secretion proteinpCD CDS20894 372 + 0.526882
NA YPA_CD0054 transposasepCD CDS45551 1173 + 0.546462
NA YPA_CD0062 hypothetical proteinpCD CDS54615 921 + 0.421281
NA YPA_CD0072 targeted effector proteinpCD CDS65018 867 + 0.344867
NA YPA_CD0026 type III secretion proteinpCD CDS21262 369 + 0.495935
NA YPA_CD0039 hypothetical proteinpCD CDS31936 192 + 0.458333
NA YPA_CD0024 Yop secretion and targeting proteinpCD CDS20629 279 + 0.433692
NA YPA_CD0052 yopE chaperonepCD CDS44349 393 + 0.409669
NA YPA_CD0056 yopH targeting proteinpCD CDS47496 426 + 0.41784
NA YPA_CD0023 membrane-bound Yop targeting proteinpCD CDS19767 882 + 0.461451
NA YPA_CD0041 yopT chaperonepCD CDS33779 399 - 0.411028
NA YPA_CD0083 hypothetical proteinpCD CDS38770 114 - 0.561404
NA YPA_CD0087 transposase remnantpCD CDS57839 96 + 0.479167
NA YPA_CD0030 V antigen, antihost protein/regulatorpCD CDS24840 981 + 0.377166
NA YPA_CD0088 hypothetical proteinpCD CDS61967 450 + 0.451111
NA YPA_CD0029 low calcium response locus protein RpCD CDS24069 441 + 0.489796
NA YPA_CD0005 type III secretion proteinpCD CDS3905 630 - 0.485714
NA YPA_CD0051 outer membrane virulence proteinpCD CDS43496 660 - 0.510606
NA YPA_CD0010 type III secretion proteinpCD CDS6466 264 - 0.416667
NA YPA_CD0082 hypothetical proteinpCD CDS29444 123 - 0.463415
NA YPA_CD0036 hypothetical proteinpCD CDS29587 210 + 0.428571
NA YPA_CD0040 hypothetical proteinpCD CDS33092 123 - 0.406504
NA YPA_CD0076 hypothetical proteinpCD CDS69194 180 - 0.466667
NA YPA_CD0061 transposasepCD CDS50934 2316 + 0.51943
NA YPA_CD0021 type III secretion proteinpCD CDS17789 465 - 0.458065
NA YPA_CD0075 protein-tyrosine phosphatase Yop effectorpCD CDS67567 1407 + 0.474058
NA YPA_CD0086 hypothetical proteinpCD CDS55658 207 + 0.449275
NA YPA_CD0078 transposasepCD CDS69790 381 - 0.435696
NA YPA_CD0037 targeted effector proteinpCD CDS30367 1053 + 0.391263
NA YPA_CD0080 transposase ORFApCD CDS1899 276 - 0.460145
NA YPA_CD0043 hypothetical proteinpCD CDS36337 240 + 0.491667
NA YPA_CD0081 type III secretion proteinpCD CDS6730 201 - 0.422886
NA YPA_CD0060 hypothetical proteinpCD CDS53246 381 - 0.509186
NA YPA_CD0020 type III secretion proteinpCD CDS16422 1368 - 0.486842
NA YPA_CD0042 cytotoxic effector proteinpCD CDS34177 969 - 0.431373
NA YPA_CD0034 hypothetical proteinpCD CDS28929 132 - 0.462121
NA YPA_CD0084 hypothetical proteinpCD CDS42105 174 - 0.471264