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2024-06-18 19:44:53

Gene list

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COG category: Unclassified
Genomic element: pSB4_227

Number of genes found: 40

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_P026 putative IS orf, fragmentpSB4_227 CDS18384 183 + 0.579235
NA SBO_P080 hypothetical proteinpSB4_227 CDS65860 222 + 0.423423
NA SBO_P079 IS1294 transposasepSB4_227 CDS64200 174 + 0.574713
NA SBO_P019 hypothetical proteinpSB4_227 CDS13685 579 - 0.310881
NA SBO_P027 hypothetical proteinpSB4_227 CDS18535 516 + 0.552326
NA SBO_P021 putative IS91 ORF2pSB4_227 CDS15585 186 - 0.537634
NA SBO_P136 IS1294 transposasepSB4_227 CDS114653 1200 - 0.575
NA SBO_P032 hypothetical proteinpSB4_227 CDS22354 207 - 0.497585
NA SBO_P147 hypothetical proteinpSB4_227 CDS123143 693 - 0.339105
NA SBO_P088 putative IS91 ORF2pSB4_227 CDS73026 423 + 0.501182
NA SBO_P139 IS1294 transposasepSB4_227 CDS118397 1209 - 0.574855
NA SBO_P110 hypothetical proteinpSB4_227 CDS91079 348 + 0.545977
NA SBO_P007 hypothetical proteinpSB4_227 CDS4699 165 + 0.381818
NA SBO_P075 IS1294 transposasepSB4_227 CDS58014 933 - 0.577706
NA SBO_P114 hypothetical proteinpSB4_227 CDS94361 270 + 0.503704
NA SBO_P135 hypothetical proteinpSB4_227 CDS114273 225 + 0.475556
NA SBO_P015 hypothetical proteinpSB4_227 CDS9387 318 + 0.490566
NA SBO_P101 hypothetical proteinpSB4_227 CDS83236 639 - 0.370892
NA SBO_P058 hypothetical proteinpSB4_227 CDS42859 168 + 0.47619
NA SBO_P020 IS91 ORFpSB4_227 CDS15229 357 - 0.52381
NA SBO_P097 hypothetical proteinpSB4_227 CDS80939 243 + 0.452675
NA SBO_P073 IS1294 transposasepSB4_227 CDS56300 267 - 0.576779
NA SBO_P090 IS91 ORFpSB4_227 CDS73562 1074 + 0.553073
NA SBO_P042 putative protein encoded within ISpSB4_227 CDS29493 207 + 0.502415
NA SBO_P087 IS1294 transposasepSB4_227 CDS72022 267 + 0.573034
NA SBO_P071 ISSfl1 ORF1pSB4_227 CDS55674 225 - 0.515556
ccdB SBO_P112 post-segregation toxinpSB4_227 CDS91797 327 + 0.504587
finO SBO_P128 FinOpSB4_227 CDS109025 561 + 0.565062
hmo SBO_P131 putative regulatorpSB4_227 CDS110679 210 + 0.371429
ipgB2 SBO_P033 IpgB2pSB4_227 CDS22962 567 + 0.320988
mkaD SBO_P017 mouse killing factorpSB4_227 CDS11927 720 - 0.380556
ospC1 SBO_P077 OspC1pSB4_227 CDS61627 1413 - 0.317764
ospC2 SBO_P138 OspC2pSB4_227 CDS116804 1455 + 0.325086
ospC3 SBO_P104 OspC3pSB4_227 CDS85650 1455 + 0.31134
ospD2 SBO_P016 OspD2pSB4_227 CDS9786 1710 - 0.331579
ospD3 SBO_P076 OspD3pSB4_227 CDS59602 1698 - 0.358068
repA SBO_P134 RepApSB4_227 CDS112308 858 + 0.578089
repB SBO_P133 RepBpSB4_227 CDS111757 261 + 0.417625
traX SBO_P127 F pilin acetylation proteinpSB4_227 CDS108224 747 + 0.576975
yigA SBO_P129 hypothetical proteinpSB4_227 CDS109716 213 + 0.619718